+D GENES KO
#
KEGG Orthology (KO) - Entomomonas moraniae
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:emo00010]
D DM558_09435 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DM558_03230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DM558_11370 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DM558_07835 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DM558_12140 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DM558_11360 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DM558_12075 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DM558_10525 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_13085 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_10510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_11220 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_05330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DM558_08940 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DM558_08935 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_14170 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DM558_14095 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DM558_05355 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DM558_10200 iron-containing alcohol dehydrogenase K04022 eutG; alcohol dehydrogenase
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_02155 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D DM558_03085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:emo00020]
D DM558_08870 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DM558_10370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D DM558_09185 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DM558_08305 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DM558_08300 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_08285 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DM558_08290 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DM558_08315 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DM558_08310 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DM558_08325 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DM558_08320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DM558_02355 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DM558_13330 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DM558_01225 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DM558_00750 FAD-dependent oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D DM558_15145 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DM558_15150 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DM558_03085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DM558_08940 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DM558_08935 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:emo00030]
D DM558_09435 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DM558_02145 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D DM558_11860 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DM558_11355 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DM558_15215 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DM558_15340 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DM558_12965 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DM558_10070 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D DM558_12780 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DM558_10530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DM558_11370 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DM558_03230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:emo00040]
D DM558_10140 altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D DM558_00985 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DM558_11860 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DM558_01555 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
D DM558_10135 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
C 00051 Fructose and mannose metabolism [PATH:emo00051]
D DM558_00980 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DM558_08150 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DM558_05325 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DM558_05320 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DM558_03230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DM558_11370 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DM558_07835 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:emo00052]
D DM558_07850 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DM558_00985 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00053 Ascorbate and aldarate metabolism [PATH:emo00053]
D DM558_12780 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_10545 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D DM558_10540 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D DM558_10560 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D DM558_02150 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:emo00500]
D DM558_00985 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DM558_09435 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:emo00520]
D DM558_15180 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DM558_14725 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DM558_07885 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DM558_12675 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DM558_15565 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D DM558_07860 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D DM558_01725 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D DM558_01720 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D DM558_01810 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DM558_00920 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DM558_00985 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DM558_07850 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DM558_09435 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DM558_00980 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DM558_08150 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DM558_05325 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DM558_04165 nucleotide sugar aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DM558_05320 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:emo00620]
D DM558_08940 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DM558_08935 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_10090 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DM558_10190 aldehyde dehydrogenase EutE K04021 eutE; aldehyde dehydrogenase
D DM558_14095 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DM558_14170 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DM558_05355 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DM558_10200 iron-containing alcohol dehydrogenase K04022 eutG; alcohol dehydrogenase
D DM558_14875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DM558_14870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DM558_10175 pta; phosphate acetyltransferase K04020 eutD; phosphotransacetylase
D DM558_10510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_11220 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_14220 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DM558_08745 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DM558_08740 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DM558_05750 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_05495 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D DM558_03795 ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D DM558_07205 ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D DM558_10405 FAD-binding protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D DM558_01745 FAD-binding oxidoreductase K18930 dld; D-lactate dehydrogenase
D DM558_11990 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D DM558_13720 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DM558_07200 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D DM558_09290 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DM558_15145 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DM558_15150 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DM558_01225 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DM558_00750 FAD-dependent oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D DM558_02355 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DM558_13330 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DM558_03085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DM558_05330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_15380 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:emo00630]
D DM558_01225 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DM558_08870 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DM558_10370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_04865 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D DM558_05315 catalase K03781 katE; catalase [EC:1.11.1.6]
D DM558_11855 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DM558_12735 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DM558_10400 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DM558_02945 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DM558_11425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_11420 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D DM558_10535 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D DM558_10530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DM558_00805 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:emo00640]
D DM558_14875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DM558_02430 propionate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15]
D DM558_14870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_10090 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DM558_13050 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D DM558_14220 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DM558_08745 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DM558_08740 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DM558_05750 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DM558_04145 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D DM558_08290 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DM558_08285 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DM558_11035 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D DM558_10370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D DM558_01865 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D DM558_07845 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D DM558_02435 pduC; propanediol/glycerol family dehydratase large subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D DM558_02440 pduD; propanediol/glycerol family dehydratase medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D DM558_02445 pduE; diol dehydratase small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
C 00650 Butanoate metabolism [PATH:emo00650]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_04865 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D DM558_08315 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DM558_08310 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DM558_08325 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DM558_08320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DM558_04145 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D DM558_03655 NADP-dependent succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DM558_10090 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D DM558_06855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11720 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11715 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DM558_14630 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D DM558_15115 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:emo00660]
D DM558_06855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11720 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11715 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DM558_14630 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D DM558_08290 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DM558_08285 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DM558_04800 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D DM558_02545 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DM558_05580 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DM558_02540 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DM558_05575 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DM558_05565 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:emo00562]
D DM558_03845 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DM558_01980 hypothetical protein K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D DM558_07835 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:emo00190]
D DM558_04080 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DM558_04075 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DM558_04070 NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D DM558_04065 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DM558_04060 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DM558_12805 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DM558_04055 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D DM558_04050 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D DM558_04045 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DM558_04040 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DM558_04035 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D DM558_04030 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DM558_04025 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DM558_04020 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DM558_08315 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DM558_08310 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DM558_08325 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DM558_08320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DM558_11880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DM558_11885 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D DM558_11890 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D DM558_11895 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D DM558_11900 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D DM558_08460 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DM558_10390 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DM558_08445 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DM558_08455 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DM558_10385 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DM558_08450 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DM558_12655 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DM558_12665 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DM558_12660 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DM558_12650 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DM558_12670 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DM558_12635 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DM558_12645 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DM558_12640 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DM558_12825 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D DM558_00100 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DM558_14930 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:emo00710]
D DM558_11360 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DM558_12140 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DM558_11370 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DM558_03230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DM558_11355 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DM558_15340 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DM558_07835 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DM558_11860 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DM558_15215 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DM558_03085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DM558_09290 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DM558_01225 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:emo00720]
D DM558_05330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DM558_15145 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DM558_15150 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DM558_01225 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DM558_02355 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DM558_13330 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DM558_08315 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DM558_08310 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DM558_08325 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DM558_08320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DM558_08285 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DM558_08290 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_09185 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DM558_10370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D DM558_14220 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DM558_08745 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DM558_08740 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DM558_05750 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DM558_01440 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D DM558_13900 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DM558_00190 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DM558_14870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DM558_14875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:emo00680]
D DM558_14170 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DM558_14165 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D DM558_01440 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D DM558_02945 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DM558_10530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DM558_10525 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_13085 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_01225 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DM558_11370 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DM558_03230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DM558_14875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DM558_14870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DM558_05330 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DM558_12075 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DM558_13065 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DM558_11410 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DM558_11585 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DM558_06460 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D DM558_09860 hypothetical protein K06914 mfnD; tyramine---L-glutamate ligase [EC:6.3.4.24]
C 00910 Nitrogen metabolism [PATH:emo00910]
D DM558_06650 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DM558_06655 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DM558_06660 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06665 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06675 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06910 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D DM558_09460 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DM558_14755 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DM558_10400 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DM558_11540 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DM558_11545 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DM558_12040 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D DM558_15070 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D DM558_14570 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:emo00920]
D DM558_13175 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DM558_14705 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DM558_14710 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DM558_14715 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DM558_14720 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DM558_12230 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DM558_12225 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D DM558_12220 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DM558_12235 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D DM558_12240 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D DM558_11390 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DM558_11395 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DM558_11105 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DM558_13870 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DM558_07985 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D DM558_15355 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D DM558_03130 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DM558_15320 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DM558_13770 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DM558_08040 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DM558_07420 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D DM558_07225 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:emo00061]
D DM558_14220 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DM558_08745 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DM558_08740 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DM558_05750 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DM558_02520 acyl carrier protein K02078 acpP; acyl carrier protein
D DM558_04655 hypothetical protein K02078 acpP; acyl carrier protein
D DM558_05070 acyl carrier protein K02078 acpP; acyl carrier protein
D DM558_05075 acyl carrier protein K02078 acpP; acyl carrier protein
D DM558_06950 acyl carrier protein K02078 acpP; acyl carrier protein
D DM558_06960 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DM558_05025 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DM558_07295 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DM558_04650 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_05010 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_06945 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_04640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_05015 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_06955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_14635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_07290 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D DM558_13420 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DM558_13455 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DM558_05430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:emo00071]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_05430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DM558_14170 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DM558_14095 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:emo00561]
D DM558_10530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_05355 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DM558_01865 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D DM558_07845 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D DM558_03815 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DM558_06970 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DM558_01655 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DM558_03840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DM558_15485 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DM558_03200 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:emo00564]
D DM558_07285 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DM558_01655 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DM558_03840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DM558_15485 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DM558_03200 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D DM558_02950 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DM558_10210 eutA; ethanolamine utilization protein EutA K04019 eutA; ethanolamine utilization protein EutA
D DM558_10215 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D DM558_10220 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D DM558_09915 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DM558_13390 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DM558_14680 phosphatidylcholine/phosphatidylserine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D DM558_11705 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DM558_03135 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DM558_10125 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DM558_03545 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D DM558_04325 HAD-IB family hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D DM558_00595 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D DM558_00155 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:emo01040]
D DM558_08390 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DM558_14105 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DM558_14675 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D DM558_00620 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:emo00230]
D DM558_13510 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DM558_13875 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D DM558_12965 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DM558_07230 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DM558_05390 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DM558_10750 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DM558_10470 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D DM558_09505 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D DM558_10755 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DM558_14060 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D DM558_14055 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DM558_03680 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DM558_05290 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DM558_05385 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DM558_00020 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DM558_13880 GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D DM558_15065 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DM558_07015 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DM558_05225 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DM558_05905 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DM558_07430 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DM558_02020 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DM558_05230 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DM558_09235 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D DM558_15490 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DM558_04010 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DM558_04005 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DM558_14555 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DM558_08500 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D DM558_15500 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DM558_13000 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DM558_14910 GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D DM558_07270 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DM558_04255 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DM558_07350 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D DM558_13965 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DM558_10000 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D DM558_12985 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D DM558_00770 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D DM558_11390 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DM558_11105 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DM558_11395 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DM558_12205 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D DM558_15125 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D DM558_09275 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5]
D DM558_10085 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5]
D DM558_06805 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D DM558_09215 allC; allantoate deiminase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D DM558_06800 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D DM558_09225 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D DM558_02820 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DM558_02825 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DM558_02830 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DM558_12020 ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D DM558_09430 ggt; gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D DM558_12040 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:emo00240]
D DM558_09530 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DM558_09540 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DM558_08010 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DM558_07075 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DM558_08005 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DM558_00650 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D DM558_14590 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DM558_05345 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DM558_13375 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DM558_05905 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DM558_14795 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DM558_13095 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DM558_04855 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DM558_00020 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DM558_06995 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D DM558_08015 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DM558_06550 N-acyl-D-amino-acid deacylase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D DM558_14555 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DM558_08185 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D DM558_04010 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DM558_04005 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DM558_06935 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DM558_11310 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DM558_15635 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DM558_03435 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:emo00250]
D DM558_03600 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DM558_10425 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DM558_11285 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DM558_10820 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D DM558_11985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DM558_10705 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DM558_04255 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DM558_05290 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DM558_08010 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DM558_04145 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D DM558_03655 NADP-dependent succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DM558_11540 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DM558_11545 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DM558_14755 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DM558_06560 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DM558_10400 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DM558_09530 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DM558_09540 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DM558_14725 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DM558_07230 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:emo00260]
D DM558_06590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DM558_05560 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DM558_09025 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DM558_06460 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D DM558_09020 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DM558_02945 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DM558_10530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DM558_12075 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DM558_13065 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DM558_11410 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DM558_11585 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DM558_09845 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DM558_11425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_11420 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D DM558_11705 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DM558_10345 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DM558_08560 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D DM558_13075 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D DM558_11810 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DM558_11805 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:emo00270]
D DM558_13770 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DM558_08040 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DM558_03415 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DM558_07145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DM558_04230 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D DM558_14700 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DM558_14365 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D DM558_04315 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D DM558_03695 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D DM558_15065 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DM558_04185 phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D DM558_05270 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_12090 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_00195 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DM558_09470 pyridoxal-phosphate dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D DM558_06590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DM558_05560 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DM558_09025 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DM558_07420 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D DM558_08840 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D DM558_07225 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D DM558_10325 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DM558_01875 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DM558_10950 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DM558_03130 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DM558_15320 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DM558_13075 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D DM558_01225 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DM558_14920 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D DM558_13065 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DM558_11410 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:emo00280]
D DM558_10325 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_04145 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:emo00290]
D DM558_10345 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DM558_02545 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DM558_05580 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DM558_02540 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DM558_05575 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DM558_05565 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DM558_06855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11720 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11715 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DM558_07945 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DM558_11710 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DM558_11590 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DM558_10325 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DM558_11285 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DM558_15380 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:emo00300]
D DM558_09025 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DM558_06590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DM558_05560 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DM558_03670 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DM558_15295 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DM558_13115 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DM558_07340 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D DM558_08090 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D DM558_04095 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DM558_11445 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DM558_11440 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DM558_07875 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D DM558_09390 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DM558_09385 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:emo00310]
D DM558_08300 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_13075 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D DM558_04145 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D DM558_03655 NADP-dependent succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DM558_06045 FAD-binding oxidoreductase K26064 amaD; D-lysine oxidase
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:emo00220]
D DM558_07220 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DM558_11985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DM558_10705 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DM558_02820 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DM558_02825 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DM558_02830 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DM558_10400 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DM558_09530 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DM558_09540 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DM558_12040 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D DM558_14755 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DM558_11285 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DM558_12585 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D DM558_03585 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DM558_14035 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DM558_14665 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DM558_12590 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:emo00330]
D DM558_06550 N-acyl-D-amino-acid deacylase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D DM558_10115 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D DM558_10110 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D DM558_04315 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D DM558_14365 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_12930 spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D DM558_09845 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DM558_07450 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D DM558_04980 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D DM558_03685 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DM558_06560 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DM558_11560 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DM558_10965 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DM558_12155 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:emo00340]
D DM558_01820 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DM558_04260 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D DM558_00230 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D DM558_00235 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D DM558_12840 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DM558_12845 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DM558_12835 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DM558_12850 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DM558_01830 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DM558_01825 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_09845 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:emo00350]
D DM558_01830 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DM558_05270 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_12090 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_09845 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DM558_05000 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DM558_14170 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DM558_14095 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DM558_04925 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D DM558_00740 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D DM558_04920 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D DM558_04950 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D DM558_04945 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D DM558_04780 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D DM558_04955 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D DM558_04935 4-hydroxyphenylacetate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D DM558_04940 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D DM558_04970 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D DM558_04965 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D DM558_03655 NADP-dependent succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:emo00360]
D DM558_09845 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DM558_05000 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DM558_01830 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DM558_05270 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_12090 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00380 Tryptophan metabolism [PATH:emo00380]
D DM558_08300 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_09845 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_05315 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:emo00400]
D DM558_10670 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DM558_02270 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DM558_08750 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DM558_04750 sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D DM558_11965 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D DM558_09245 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D DM558_09905 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D DM558_02265 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DM558_04860 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D DM558_15025 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DM558_11850 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DM558_11845 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DM558_11840 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DM558_05745 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DM558_11835 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DM558_11810 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DM558_11805 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DM558_11405 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D DM558_13340 ArtI protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D DM558_01830 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DM558_05270 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_12090 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:emo00410]
D DM558_08925 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DM558_04145 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_10830 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DM558_03435 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:emo00430]
D DM558_10490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DM558_14755 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DM558_14870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DM558_14875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DM558_08540 SDR family NAD(P)-dependent oxidoreductase K15373 isfD; sulfoacetaldehyde reductase [EC:1.1.1.313]
C 00440 Phosphonate and phosphinate metabolism [PATH:emo00440]
D DM558_09875 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D DM558_09880 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:emo00450]
D DM558_03415 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DM558_07145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DM558_04230 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D DM558_05940 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DM558_11390 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DM558_11395 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DM558_01325 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DM558_01330 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DM558_15170 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:emo00460]
D DM558_10490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DM558_03600 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DM558_10425 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DM558_02945 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:emo00470]
D DM558_11520 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DM558_09355 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DM558_13075 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D DM558_15255 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DM558_09375 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DM558_08560 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D DM558_11445 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DM558_11440 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:emo00480]
D DM558_10490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DM558_01875 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DM558_10950 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DM558_09310 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DM558_08855 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DM558_09950 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DM558_14205 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DM558_04115 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D DM558_09185 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DM558_04315 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D DM558_01575 bifunctional glutathionylspermidine amidase/synthase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:emo00540]
D DM558_12445 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DM558_09335 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DM558_13415 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DM558_00850 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DM558_13425 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DM558_00900 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DM558_01775 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DM558_13090 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DM558_01770 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DM558_00910 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DM558_14370 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DM558_12180 lysophospholipid acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DM558_08945 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DM558_11925 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D DM558_12145 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D DM558_03075 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DM558_07110 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DM558_04265 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D DM558_15480 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DM558_11065 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DM558_11070 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DM558_11345 rfaP; lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D DM558_01750 cptA; phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D DM558_11350 glycosyltransferase family 1 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:emo00541]
D DM558_00985 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DM558_07850 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DM558_06850 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DM558_08135 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DM558_08125 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DM558_08130 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DM558_09955 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DM558_00980 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DM558_08150 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DM558_05325 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DM558_05320 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DM558_04165 nucleotide sugar aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DM558_12675 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DM558_00590 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D DM558_08115 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:emo00550]
D DM558_01810 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DM558_00920 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DM558_09360 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DM558_09375 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DM558_09390 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DM558_09355 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DM558_09385 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DM558_13385 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DM558_09380 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DM558_09365 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DM558_01500 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DM558_02235 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DM558_13135 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D DM558_01495 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DM558_10985 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DM558_09395 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DM558_11005 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DM558_08545 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis
D DM558_00590 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:emo00543]
D DM558_13770 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:emo00730]
D DM558_14605 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D DM558_12165 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DM558_06875 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DM558_08580 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DM558_00140 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DM558_08890 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D DM558_12170 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DM558_00725 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DM558_13950 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DM558_10045 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DM558_13965 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:emo00740]
D DM558_13200 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DM558_00710 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DM558_15225 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DM558_11875 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D DM558_00715 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DM558_03105 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DM558_00160 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DM558_02505 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D DM558_00740 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D DM558_04920 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D DM558_12240 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D DM558_09900 oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D DM558_13510 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DM558_13505 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:emo00750]
D DM558_03215 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D DM558_11410 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DM558_09020 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DM558_11940 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D DM558_11935 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:emo00760]
D DM558_03150 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DM558_00020 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DM558_10970 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DM558_07365 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D DM558_03155 ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DM558_14970 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D DM558_03145 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D DM558_01590 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DM558_08235 Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D DM558_03655 NADP-dependent succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:emo00770]
D DM558_06855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11720 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DM558_11715 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DM558_07945 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DM558_11710 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DM558_11590 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DM558_04245 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DM558_09850 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DM558_10830 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DM558_13985 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DM558_11315 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DM558_10265 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DM558_02335 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DM558_06815 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D DM558_10325 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DM558_03435 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DM558_08925 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:emo00780]
D DM558_05455 bioC; malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D DM558_05025 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DM558_07295 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DM558_04650 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_05010 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_06945 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_04640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_05015 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_06955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_14635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_13420 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DM558_13455 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DM558_05460 alpha/beta fold hydrolase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D DM558_05465 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DM558_05445 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DM558_05450 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DM558_05470 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D DM558_13990 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:emo00785]
D DM558_11015 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DM558_11050 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_08940 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DM558_08935 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DM558_08305 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DM558_08300 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DM558_11425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DM558_11420 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:emo00790]
D DM558_05145 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DM558_10045 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DM558_01660 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D DM558_01665 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DM558_11565 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DM558_07890 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DM558_15345 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DM558_05755 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DM558_13200 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DM558_00710 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DM558_14580 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D DM558_09585 dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D DM558_13010 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D DM558_03830 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DM558_14515 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DM558_14520 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DM558_02280 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DM558_06600 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DM558_06630 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DM558_06620 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DM558_06605 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DM558_06610 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DM558_06615 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:emo00670]
D DM558_15345 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DM558_13010 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D DM558_13900 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DM558_02945 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DM558_10750 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DM558_05385 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DM558_15090 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DM558_11425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DM558_07145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DM558_15635 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DM558_00805 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DM558_00190 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DM558_03010 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:emo00860]
D DM558_11275 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DM558_00095 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DM558_00615 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DM558_00610 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D DM558_13120 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DM558_11960 oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D DM558_11125 coproporphyrinogen III oxidase family protein K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DM558_11825 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DM558_07955 menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D DM558_03560 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DM558_00605 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D DM558_07965 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D DM558_03310 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D DM558_03255 NAD(P)-dependent oxidoreductase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D DM558_11880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DM558_03315 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D DM558_03320 cobalt-factor II C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D DM558_03300 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D DM558_03290 cobalt-precorrin-4 methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D DM558_03295 cbiG; cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D DM558_03305 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D DM558_03275 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D DM558_03285 decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D DM558_03280 cobalt-precorrin-7 (C(5))-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D DM558_03270 cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D DM558_03260 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DM558_03250 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DM558_04225 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DM558_06480 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DM558_03265 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DM558_06500 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DM558_06490 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DM558_06495 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D DM558_06485 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D DM558_06505 pyridoxal phosphate-dependent class II aminotransferase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D DM558_10170 eutT; ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D DM558_07040 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D DM558_11055 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D DM558_13830 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:emo00130]
D DM558_14475 YbgC/FadM family acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D DM558_11550 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D DM558_11740 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DM558_14020 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D DM558_13505 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DM558_03645 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D DM558_07865 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D DM558_03035 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D DM558_00250 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DM558_14355 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D DM558_14210 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D DM558_05425 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:emo00900]
D DM558_00140 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DM558_13395 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DM558_11765 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D DM558_13840 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DM558_00010 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D DM558_05885 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DM558_09655 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_13505 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DM558_05770 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DM558_13550 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DM558_13385 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:emo00903]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_13025 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DM558_11355 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:emo00523]
D DM558_06850 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DM558_08135 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DM558_08125 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DM558_08130 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DM558_09955 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:emo01053]
D DM558_03755 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D DM558_14595 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
D DM558_05695 amino acid adenylation domain-containing protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D DM558_05650 salicylate synthase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:emo01055]
D DM558_00105 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DM558_08135 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:emo00332]
D DM558_11560 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DM558_10965 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:emo00261]
D DM558_00105 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D DM558_11390 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DM558_11395 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DM558_06590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DM558_05560 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DM558_03670 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DM558_15295 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DM558_13115 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:emo00521]
D DM558_03845 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DM558_06850 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DM558_08135 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DM558_08125 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DM558_08130 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DM558_09955 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:emo00525]
D DM558_06850 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DM558_08135 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:emo00401]
D DM558_04860 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D DM558_01830 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DM558_05270 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_12090 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D DM558_11850 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DM558_11845 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D DM558_06960 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DM558_04640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_05015 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_06955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_14635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_13455 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DM558_02520 acyl carrier protein K02078 acpP; acyl carrier protein
D DM558_04655 hypothetical protein K02078 acpP; acyl carrier protein
D DM558_05070 acyl carrier protein K02078 acpP; acyl carrier protein
D DM558_05075 acyl carrier protein K02078 acpP; acyl carrier protein
D DM558_06950 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:emo00999]
D DM558_14700 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DM558_11965 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:emo00362]
D DM558_03385 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DM558_02720 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DM558_07135 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DM558_10475 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DM558_04790 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D DM558_04785 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D DM558_04780 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D DM558_04795 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D DM558_04810 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D DM558_04805 amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D DM558_04800 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D DM558_06900 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D DM558_04765 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D DM558_14475 YbgC/FadM family acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:emo00627]
D DM558_13505 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DM558_04790 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D DM558_04785 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D DM558_04780 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D DM558_04795 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:emo00625]
D DM558_14095 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DM558_14170 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DM558_12915 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DM558_02535 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:emo00361]
D DM558_02380 oxidoreductase K21607 pcpD; tetrachlorobenzoquinone reductase [EC:1.1.1.404]
D DM558_02535 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation
C 00622 Xylene degradation
D DM558_03385 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:emo00633]
D DM558_14600 oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D DM558_05000 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
C 00791 Atrazine degradation
D DM558_02820 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DM558_02825 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DM558_02830 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:emo00930]
D DM558_12780 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DM558_13025 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D DM558_03385 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:emo00626]
D DM558_14095 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DM558_14170 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D DM558_04790 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D DM558_04785 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation
D DM558_09560 GMC family oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:emo03020]
D DM558_14275 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DM558_14280 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DM558_13685 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DM558_15495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:emo03010]
D DM558_04850 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DM558_13355 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DM558_13590 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DM558_13680 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DM558_13645 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DM558_09675 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DM558_14290 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DM558_13630 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DM558_15540 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DM558_13555 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DM558_13675 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DM558_14285 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DM558_13670 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DM558_13625 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DM558_02320 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DM558_14765 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DM558_13605 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DM558_09670 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DM558_13580 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DM558_11500 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DM558_07070 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DM558_14260 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DM558_13575 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DM558_13560 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DM558_13565 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DM558_13620 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DM558_13635 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DM558_14270 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DM558_09665 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DM558_14265 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DM558_14255 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DM558_15545 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DM558_13610 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DM558_13655 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DM558_13595 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DM558_13690 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DM558_13640 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DM558_14780 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DM558_05800 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DM558_13540 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DM558_13585 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DM558_13570 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DM558_13615 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DM558_12960 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D DM558_13535 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DM558_08530 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DM558_13600 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DM558_13650 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DM558_07445 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DM558_06975 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DM558_08535 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DM558_12465 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DM558_05805 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DM558_13665 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DM558_11700 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_09645 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_11250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_10455 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_10440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_09630 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_11235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_11685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_09625 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_11230 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_11680 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_10435 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:emo00970]
D DM558_02760 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_09635 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_10445 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_11240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_11690 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_11095 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_13780 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_13785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_02880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_05590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_05740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DM558_10275 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DM558_01075 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DM558_12970 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DM558_09975 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DM558_14840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DM558_03540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DM558_14230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DM558_09980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DM558_02875 tRNA-His K14226 tRNA-His; tRNA His
D DM558_09640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_10450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_11245 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_11695 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_00700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_02870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_04475 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_07825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_08230 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DM558_05730 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DM558_05600 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DM558_02290 tRNA-Met K14230 tRNA-Met; tRNA Met
D DM558_07055 tRNA-Met K14230 tRNA-Met; tRNA Met
D DM558_10250 tRNA-Met K14230 tRNA-Met; tRNA Met
D DM558_12870 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DM558_05735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DM558_11210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DM558_05605 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DM558_06580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DM558_09720 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DM558_01020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DM558_04330 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DM558_14235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DM558_14240 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DM558_14225 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DM558_00275 tRNA-Val K14237 tRNA-Val; tRNA Val
D DM558_10270 tRNA-Val K14237 tRNA-Val; tRNA Val
D DM558_11275 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DM558_14820 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DM558_14825 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DM558_14815 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DM558_09575 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DM558_06595 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DM558_14450 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DM558_15470 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DM558_15475 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DM558_05815 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DM558_07960 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DM558_01330 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DM558_09570 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DM558_15170 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DM558_15090 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DM558_10885 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DM558_09010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DM558_00165 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DM558_13315 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DM558_00050 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DM558_03170 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DM558_05880 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DM558_05865 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DM558_05860 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DM558_15575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DM558_12595 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:emo03060]
D DM558_13660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DM558_14245 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DM558_07830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DM558_08335 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DM558_15400 hypothetical protein K03072 secD; preprotein translocase subunit SecD
D DM558_08330 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DM558_08340 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DM558_12480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DM558_03580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DM558_12935 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DM558_14760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DM558_13765 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D DM558_13805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DM558_08720 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DM558_08770 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DM558_00170 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:emo04122]
D DM558_06875 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DM558_03130 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DM558_15320 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DM558_03165 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DM558_09965 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DM558_01000 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D DM558_01005 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D DM558_01010 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D DM558_00995 tusE; TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D DM558_09195 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DM558_06620 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DM558_06600 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DM558_06625 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D DM558_06645 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D DM558_15250 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D DM558_06630 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DM558_06605 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DM558_08580 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DM558_08885 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:emo03018]
D DM558_09170 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DM558_09500 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D DM558_04915 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D DM558_10525 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_13085 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_02325 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DM558_00185 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DM558_04515 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DM558_00065 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DM558_08655 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DM558_14015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DM558_13105 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DM558_11470 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DM558_13910 RNA chaperone Hfq K03666 hfq; host factor-I protein
D DM558_00100 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DM558_14930 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DM558_11570 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:emo03030]
D DM558_13735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DM558_14215 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DM558_09605 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DM558_06930 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DM558_09000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DM558_00110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DM558_12455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DM558_09660 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DM558_07065 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DM558_03885 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_04350 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_06430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_07785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_10720 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_13730 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DM558_13435 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DM558_12795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DM558_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:emo03410]
D DM558_12000 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DM558_08060 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DM558_12860 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DM558_07990 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DM558_11530 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DM558_03865 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DM558_14585 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DM558_12795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DM558_04015 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DM558_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:emo03420]
D DM558_06015 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DM558_13335 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D DM558_05280 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D DM558_14145 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D DM558_12745 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DM558_12795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DM558_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:emo03430]
D DM558_05415 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DM558_13920 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D DM558_12745 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DM558_00800 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D DM558_08595 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DM558_05775 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DM558_04015 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DM558_03885 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_04350 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_06430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_07785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_10720 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_14215 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DM558_12455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DM558_09605 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DM558_09000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DM558_06930 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DM558_13735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DM558_00110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DM558_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:emo03440]
D DM558_04015 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DM558_03885 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_04350 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_06430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_07785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_10720 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_12450 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D DM558_08990 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DM558_09595 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DM558_14965 recA; recombinase RecA K03553 recA; recombination protein RecA
D DM558_12795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DM558_14465 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DM558_14470 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DM558_14460 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DM558_15515 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DM558_14410 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DM558_11610 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DM558_14405 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DM558_14215 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DM558_12455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DM558_09605 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DM558_09000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DM558_06930 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DM558_13735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DM558_00110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DM558_00040 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:emo03250]
D DM558_04240 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:emo02010]
D DM558_13175 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DM558_14705 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DM558_14710 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DM558_14715 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DM558_14720 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DM558_12230 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DM558_12225 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D DM558_12220 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DM558_06680 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DM558_06685 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D DM558_06690 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DM558_09895 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DM558_09885 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D DM558_09890 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DM558_00970 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D DM558_00955 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D DM558_00960 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D DM558_00965 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DM558_12160 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DM558_08620 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D DM558_08615 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DM558_01795 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DM558_01790 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DM558_01785 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DM558_01800 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D DM558_01780 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DM558_10010 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D DM558_09990 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D DM558_09995 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D DM558_10005 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D DM558_05540 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D DM558_05535 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D DM558_05530 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D DM558_05525 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DM558_12570 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D DM558_12575 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D DM558_12580 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D DM558_02785 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein
D DM558_02780 ABC transporter permease subunit K15585 nikB; nickel transport system permease protein
D DM558_02775 ABC transporter permease subunit K15586 nikC; nickel transport system permease protein
D DM558_02770 ABC transporter ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DM558_02765 ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DM558_13475 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D DM558_13470 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D DM558_13465 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D DM558_13460 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D DM558_13205 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D DM558_10850 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DM558_10835 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D DM558_10840 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DM558_06520 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D DM558_06525 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D DM558_06515 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D DM558_06510 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DM558_05175 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D DM558_05185 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D DM558_05180 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DM558_07190 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D DM558_07195 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D DM558_01755 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DM558_13795 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DM558_13800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DM558_05645 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DM558_05640 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DM558_14025 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DM558_07995 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DM558_02480 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DM558_11025 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:emo02060]
D DM558_09165 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D DM558_00135 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D DM558_00125 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:emo03070]
D DM558_11300 channel protein TolC K12340 tolC; outer membrane protein
D DM558_00270 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DM558_08335 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DM558_15400 hypothetical protein K03072 secD; preprotein translocase subunit SecD
D DM558_08330 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DM558_14245 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DM558_07830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DM558_13660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DM558_08340 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DM558_12480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DM558_03580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DM558_13805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DM558_12935 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DM558_14760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DM558_01025 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_02610 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_02650 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_05100 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_06830 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_09795 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_11180 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_12280 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_10575 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D DM558_10605 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D DM558_10590 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D DM558_10595 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D DM558_10625 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D DM558_10585 serine/threonine-protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:emo02020]
D DM558_05510 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DM558_05515 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DM558_10045 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DM558_05540 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D DM558_03115 HAMP domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D DM558_03110 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D DM558_02505 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D DM558_13865 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DM558_13860 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DM558_12690 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D DM558_04195 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D DM558_14180 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D DM558_14185 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D DM558_04280 mdtA; MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D DM558_07465 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D DM558_04285 mdtB; MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D DM558_07460 acriflavine resistance protein B K07788 mdtB; multidrug efflux pump
D DM558_04290 acriflavine resistance protein B K07789 mdtC; multidrug efflux pump
D DM558_06715 HAMP domain-containing protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DM558_06710 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DM558_06735 efflux transporter outer membrane subunit K07796 cusC; outer membrane protein, copper/silver efflux system
D DM558_06730 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D DM558_06725 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D DM558_06720 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D DM558_14125 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D DM558_14130 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D DM558_01300 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DM558_01305 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DM558_01285 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D DM558_01290 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D DM558_01295 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D DM558_01280 potassium-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit
D DM558_12460 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DM558_00975 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D DM558_04895 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_08630 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10055 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10100 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_11635 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW
D DM558_09120 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D DM558_13230 GHKL domain-containing protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D DM558_13225 response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D DM558_13250 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D DM558_13255 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D DM558_13260 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D DM558_13265 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D DM558_13270 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D DM558_13275 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D DM558_07200 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D DM558_06635 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D DM558_06640 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DM558_06660 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06665 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06675 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06670 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D DM558_06585 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D DM558_04465 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D DM558_04470 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D DM558_06765 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_08210 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_04450 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_06770 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_08205 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_08085 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D DM558_07305 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DM558_07310 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DM558_10400 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DM558_15560 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_06790 MFS transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D DM558_05140 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D DM558_00220 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DM558_00215 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D DM558_00115 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D DM558_01180 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D DM558_11815 pilin K02650 pilA; type IV pilus assembly protein PilA
D DM558_13060 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D DM558_10930 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D DM558_10935 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D DM558_10945 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D DM558_10940 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D DM558_10920 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D DM558_11830 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DM558_02425 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D DM558_03800 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D DM558_03805 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D DM558_08460 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DM558_10390 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DM558_08445 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DM558_08455 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DM558_10385 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DM558_08450 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DM558_11300 channel protein TolC K12340 tolC; outer membrane protein
D DM558_00915 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:emo02024]
D DM558_13910 RNA chaperone Hfq K03666 hfq; host factor-I protein
D DM558_11850 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DM558_11845 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DM558_10670 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DM558_14125 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D DM558_14130 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D DM558_01305 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DM558_12535 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DM558_12540 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DM558_12550 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DM558_12545 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DM558_12530 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DM558_05430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DM558_11830 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DM558_10845 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DM558_13200 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DM558_15225 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DM558_12095 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D DM558_12480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DM558_14245 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DM558_07830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DM558_13660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DM558_08340 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DM558_03580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DM558_13805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DM558_12935 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DM558_14760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:emo02040]
D DM558_07060 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DM558_00115 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DM558_10525 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_13085 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:emo04980]
D DM558_03250 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DM558_04225 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DM558_07145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:emo01501]
D DM558_04895 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_08630 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10055 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10100 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_03705 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DM558_15180 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DM558_14110 RNA ligase RtcB family protein K18148 rtcB; release factor H-coupled RctB family protein
D DM558_03860 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D DM558_12105 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DM558_12100 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D DM558_12095 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D DM558_04550 sensor histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D DM558_04545 DNA-binding response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D DM558_04540 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system
D DM558_04535 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump
D DM558_11300 channel protein TolC K12340 tolC; outer membrane protein
D DM558_02235 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DM558_10985 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DM558_09395 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:emo01502]
D DM558_09355 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DM558_11520 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DM558_09385 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DM558_09380 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DM558_09365 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DM558_11635 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:emo01503]
D DM558_03115 HAMP domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D DM558_03110 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D DM558_03075 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DM558_12690 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D DM558_13925 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DM558_11910 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DM558_04240 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DM558_12105 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DM558_12100 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D DM558_11300 channel protein TolC K12340 tolC; outer membrane protein
D DM558_12445 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DM558_00975 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:emo01000]
C 01001 Protein kinases [BR:emo01001]
D DM558_05510 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DM558_03115 HAMP domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D DM558_13865 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DM558_04195 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D DM558_14180 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D DM558_06715 HAMP domain-containing protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DM558_14125 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D DM558_01300 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DM558_04550 sensor histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D DM558_12680 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DM558_06635 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D DM558_04465 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D DM558_13230 GHKL domain-containing protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D DM558_07305 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DM558_00220 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DM558_03800 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:emo01009]
D DM558_00195 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DM558_09710 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_12060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_11585 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:emo01002]
D DM558_00170 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DM558_02340 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DM558_10660 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D DM558_01430 hycI; hydrogenase maturation peptidase HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D DM558_02020 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DM558_05230 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DM558_07230 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DM558_11540 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DM558_14725 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DM558_10680 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D DM558_08385 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D DM558_08855 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DM558_12120 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D DM558_13810 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DM558_13815 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DM558_09310 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DM558_08180 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D DM558_04095 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DM558_09215 allC; allantoate deiminase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D DM558_08080 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DM558_03030 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DM558_07895 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DM558_08070 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DM558_03160 M48 family peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D DM558_13400 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DM558_11005 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DM558_08545 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DM558_07260 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DM558_07250 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DM558_14745 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DM558_01120 LexA family transcriptional regulator K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_02985 LexA family transcriptional regulator K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_06075 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_07490 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_08720 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DM558_08770 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DM558_12155 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D DM558_08095 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DM558_12065 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DM558_15030 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D DM558_07380 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D DM558_13755 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DM558_10490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DM558_09430 ggt; gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D DM558_15430 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D DM558_06055 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D DM558_06060 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D DM558_14200 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D DM558_14190 tldD; metalloprotease TldD K03568 tldD; TldD protein
D DM558_01680 ecotin K08276 eco; ecotin
D DM558_01490 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D DM558_10025 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D DM558_11605 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D DM558_11600 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:emo01003]
D DM558_01500 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DM558_01495 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DM558_13135 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D DM558_02235 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:emo01005]
D DM558_12445 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DM558_13425 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DM558_09335 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DM558_13415 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DM558_00850 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DM558_00900 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DM558_12180 lysophospholipid acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DM558_08945 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DM558_11925 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D DM558_12145 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D DM558_14370 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DM558_03075 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DM558_13090 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DM558_00910 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DM558_01770 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DM558_01775 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DM558_11065 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DM558_11070 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DM558_11350 glycosyltransferase family 1 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D DM558_11345 rfaP; lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D DM558_01750 cptA; phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D DM558_06845 glycosyltransferase K12988 wapR; alpha-1,3-rhamnosyltransferase [EC:2.4.1.-]
D DM558_07110 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DM558_15480 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DM558_04265 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D DM558_08110 glycosyltransferase family 4 protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D DM558_02895 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D DM558_15610 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:emo01011]
D DM558_01810 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DM558_00920 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DM558_09360 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DM558_09375 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DM558_09390 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DM558_09355 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DM558_11520 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DM558_15255 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DM558_09380 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DM558_09365 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DM558_11495 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D DM558_02235 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DM558_13135 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D DM558_01495 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DM558_10985 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DM558_09395 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DM558_11005 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DM558_08545 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DM558_01500 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DM558_08385 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D DM558_04905 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DM558_05965 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D DM558_10995 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D DM558_13715 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DM558_12975 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D DM558_06940 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DM558_11000 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DM558_13925 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DM558_11920 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:emo01004]
D DM558_06960 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DM558_05025 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DM558_07295 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DM558_04650 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_05010 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_06945 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DM558_04640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_05015 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_06955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_14635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DM558_07290 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D DM558_13420 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DM558_13455 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DM558_08390 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DM558_14105 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DM558_14675 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D DM558_00620 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D DM558_05430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DM558_02525 hypothetical protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D DM558_06970 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DM558_01655 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DM558_03840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DM558_15485 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:emo01008]
D DM558_03755 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D DM558_05650 salicylate synthase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D DM558_05695 amino acid adenylation domain-containing protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D DM558_05700 thioesterase K12242 pchC; pyochelin biosynthesis protein PchC
D DM558_00105 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:emo01006]
D DM558_05770 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DM558_13550 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DM558_13385 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DM558_13915 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DM558_14210 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D DM558_11740 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DM558_11880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:emo01007]
D DM558_11275 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DM558_09575 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DM558_09035 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D DM558_15575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DM558_12595 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DM558_09570 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DM558_00050 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DM558_15170 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DM558_00165 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DM558_10885 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DM558_09010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DM558_13315 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DM558_14450 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DM558_05880 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DM558_15470 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DM558_15475 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DM558_07960 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DM558_03170 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DM558_05815 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DM558_06595 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DM558_05865 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DM558_05860 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DM558_11285 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DM558_05270 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_12090 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DM558_08090 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D DM558_01830 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DM558_05465 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DM558_03415 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DM558_07450 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D DM558_04145 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D DM558_05445 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DM558_10325 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DM558_14580 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D DM558_09880 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DM558_11410 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DM558_06800 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D DM558_04165 nucleotide sugar aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:emo00194]
D DM558_12670 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DM558_12665 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DM558_12660 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DM558_12655 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DM558_12650 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DM558_12645 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DM558_12640 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DM558_12635 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DM558_12630 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:emo03000]
D DM558_04995 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D DM558_10245 eutR; HTH-type transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D DM558_05720 AraC family transcriptional regulator K05372 ybtA; AraC family transcriptional regulator
D DM558_11505 hypothetical protein K13652 K13652; AraC family transcriptional regulator
D DM558_01860 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DM558_03740 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DM558_14640 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DM558_07855 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D DM558_15510 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DM558_12050 allS; HTH-type transcriptional activator AllS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D DM558_06540 cynR; transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D DM558_00005 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D DM558_08570 dsdC; DNA-binding transcriptional regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D DM558_13165 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D DM558_04680 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D DM558_02550 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D DM558_04815 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D DM558_10815 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D DM558_11320 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D DM558_09250 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D DM558_03635 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DM558_02030 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DM558_03860 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D DM558_03440 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DM558_13020 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DM558_09080 MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D DM558_10355 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D DM558_13285 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DM558_10845 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DM558_04830 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D DM558_11830 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DM558_11820 fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DM558_06870 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D DM558_01710 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DM558_13990 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DM558_05380 DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D DM558_12430 XRE family transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D DM558_10620 sigma-54-dependent Fis family transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator
D DM558_09205 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D DM558_01340 GAF domain-containing protein K15836 fhlA; formate hydrogenlyase transcriptional activator
D DM558_10565 carbohydrate diacid regulon transcriptional regulator CdaR K02647 cdaR; carbohydrate diacid regulator
D DM558_02110 transporter K02019 modE; molybdate transport system regulatory protein
D DM558_04615 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D DM558_06560 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DM558_12760 rcnR; transcriptional repressor RcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D DM558_03555 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D DM558_12625 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DM558_08015 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DM558_02750 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D DM558_07820 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D DM558_09730 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D DM558_08025 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D DM558_09040 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DM558_15220 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D DM558_13695 AAA family ATPase K14414 rtcR; transcriptional regulatory protein RtcR
D DM558_09410 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:emo03021]
D DM558_13685 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DM558_14275 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DM558_14280 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DM558_15495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DM558_07060 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DM558_00420 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DM558_08790 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DM558_13790 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D DM558_00115 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D DM558_15595 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D DM558_02300 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DM558_00720 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DM558_14250 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D DM558_03205 stringent starvation protein A K03599 sspA; stringent starvation protein A
D DM558_03210 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D DM558_01165 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DM558_08785 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D DM558_08780 hypothetical protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D DM558_09040 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DM558_09525 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D DM558_08405 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D DM558_14015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:emo03019]
D DM558_09500 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D DM558_14790 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D DM558_08765 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DM558_04515 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DM558_13940 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DM558_04915 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D DM558_00185 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DM558_00065 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DM558_08655 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DM558_10525 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_13085 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_02325 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DM558_14015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DM558_13105 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DM558_11470 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DM558_13910 RNA chaperone Hfq K03666 hfq; host factor-I protein
D DM558_00100 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DM558_14930 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DM558_11570 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DM558_09170 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DM558_06585 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D DM558_00130 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D DM558_10665 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:emo03011]
D DM558_04850 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DM558_13355 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DM558_13590 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DM558_13680 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DM558_13645 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DM558_09675 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DM558_14290 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DM558_13630 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DM558_15540 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DM558_13555 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DM558_13675 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DM558_14285 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DM558_13670 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DM558_13625 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DM558_02320 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DM558_14765 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DM558_13605 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DM558_09670 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DM558_13580 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DM558_11500 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DM558_07070 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DM558_14260 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DM558_13575 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DM558_13560 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DM558_13565 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DM558_13620 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DM558_13635 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DM558_09665 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DM558_14265 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DM558_14255 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DM558_14270 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DM558_15545 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DM558_13610 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DM558_13655 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DM558_13595 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DM558_13690 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DM558_13640 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DM558_14780 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DM558_05800 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DM558_13540 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DM558_13585 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DM558_13570 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DM558_13615 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DM558_13535 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DM558_08530 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DM558_13600 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DM558_13650 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DM558_07445 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DM558_06975 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DM558_08535 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DM558_12465 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DM558_05805 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DM558_13665 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DM558_12960 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D DM558_09625 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_11230 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_11680 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_10435 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_11700 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_09645 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_11250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_10455 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_10440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_09630 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_11235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_11685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:emo03009]
D DM558_08765 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DM558_13940 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DM558_08760 GTPase Era K03595 era; GTPase
D DM558_13530 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D DM558_09040 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DM558_02300 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DM558_00720 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DM558_14250 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D DM558_00760 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DM558_15085 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DM558_03240 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D DM558_13820 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DM558_00145 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DM558_12615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DM558_09405 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DM558_09320 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DM558_15045 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D DM558_04090 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D DM558_04520 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DM558_07900 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D DM558_00835 methyltransferase domain-containing protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D DM558_10980 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DM558_05420 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DM558_12995 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D DM558_00945 rlmL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D DM558_09960 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D DM558_05900 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DM558_14915 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DM558_08430 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DM558_05795 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DM558_12740 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D DM558_15060 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DM558_09075 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D DM558_12920 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DM558_05955 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D DM558_14770 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D DM558_15590 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DM558_08730 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DM558_05295 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D DM558_09500 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D DM558_14790 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D DM558_08020 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DM558_09855 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D DM558_00065 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DM558_13950 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DM558_02995 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D DM558_13905 hflX; GTPase HflX K03665 hflX; GTPase
D DM558_13125 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DM558_15500 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DM558_02310 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D DM558_02295 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D DM558_10975 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D DM558_10775 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D DM558_07905 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D DM558_14195 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D DM558_00120 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D DM558_12950 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D DM558_06980 metal-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:emo03016]
D DM558_15110 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D DM558_00780 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DM558_13710 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D DM558_11275 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DM558_03170 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DM558_00165 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DM558_09010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DM558_15170 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DM558_09575 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DM558_00050 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DM558_13315 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DM558_14450 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DM558_06595 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DM558_05815 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DM558_07960 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DM558_09570 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DM558_10885 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DM558_05880 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DM558_05865 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DM558_05860 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DM558_15575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DM558_12595 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DM558_12150 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DM558_14350 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DM558_08895 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DM558_15585 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D DM558_15230 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DM558_02315 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DM558_00015 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D DM558_06875 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DM558_13125 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DM558_13915 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DM558_12490 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DM558_12610 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DM558_01325 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DM558_13870 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DM558_12470 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DM558_09315 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D DM558_07080 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D DM558_14090 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DM558_08960 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D DM558_12755 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D DM558_02930 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D DM558_15470 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DM558_15475 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DM558_09035 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D DM558_03810 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D DM558_12980 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DM558_05255 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D DM558_05375 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DM558_10785 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DM558_01690 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D DM558_01685 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D DM558_00645 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D DM558_00070 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D DM558_14775 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DM558_07000 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D DM558_14325 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DM558_08430 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DM558_09195 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DM558_03565 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DM558_03165 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DM558_09965 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DM558_01000 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D DM558_01005 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D DM558_01010 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D DM558_00995 tusE; TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D DM558_06885 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D DM558_08805 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D DM558_08380 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D DM558_10375 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D DM558_08350 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DM558_14520 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DM558_03830 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DM558_14515 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DM558_02280 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DM558_09300 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D DM558_08345 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DM558_08580 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DM558_10960 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DM558_13970 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DM558_01620 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DM558_13930 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DM558_13430 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D DM558_04515 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DM558_02325 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:emo03012]
D DM558_04490 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D DM558_02305 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DM558_05810 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DM558_11865 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DM558_13360 elongation factor Ts K02357 tsf; elongation factor Ts
D DM558_14300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DM558_14295 fusA; elongation factor G K02355 fusA; elongation factor G
D DM558_01320 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D DM558_13855 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D DM558_13380 ribosome recycling factor K02838 frr; ribosome recycling factor
D DM558_15245 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DM558_12955 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DM558_09680 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DM558_08905 efp; elongation factor P K02356 efp; elongation factor P
D DM558_13320 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DM558_05250 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D DM558_14115 peptide chain release factor H K02839 prfH; peptide chain release factor
D DM558_05960 arfA; ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:emo03110]
D DM558_08485 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D DM558_05240 ATP-dependent Clp protease ATP-binding subunit K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DM558_15395 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DM558_07255 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DM558_13760 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DM558_09710 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_12060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_13105 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DM558_06895 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D DM558_11470 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DM558_13110 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DM558_01155 DNA-binding protein K05516 cbpA; curved DNA-binding protein
D DM558_06030 hypothetical protein K05801 djlA; DnaJ like chaperone protein
D DM558_06890 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D DM558_03195 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D DM558_13100 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D DM558_13995 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D DM558_11475 co-chaperone GroES K04078 groES; chaperonin GroES
D DM558_07895 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DM558_12635 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DM558_06765 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_08210 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_12935 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DM558_12685 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D DM558_06835 hypothetical protein K19777 hdeA; acid stress chaperone HdeA
D DM558_01375 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DM558_01370 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D DM558_04240 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DM558_00845 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DM558_07240 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D DM558_00705 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D DM558_00175 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D DM558_14880 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D DM558_01735 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DM558_05945 trxA; thioredoxin K03671 TXN; thioredoxin
D DM558_10800 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D DM558_13955 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D DM558_08155 glutaredoxin 2 K03675 grxB; glutaredoxin 2
D DM558_12940 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D DM558_14005 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D DM558_11910 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DM558_00785 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D DM558_07925 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DM558_08755 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:emo04131]
D DM558_05905 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DM558_08600 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D DM558_12140 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DM558_10510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_11220 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_09710 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_12060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:emo03051]
D DM558_09710 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_12060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:emo03032]
D DM558_13730 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DM558_07245 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_07325 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_07940 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_05855 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D DM558_14045 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D DM558_12460 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DM558_09660 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DM558_06350 AAA family ATPase K02315 dnaC; DNA replication protein DnaC
D DM558_07705 AAA family ATPase K02315 dnaC; DNA replication protein DnaC
D DM558_07065 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DM558_03885 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_04350 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_06430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_07785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_10720 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_14215 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DM558_12455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DM558_00110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DM558_09000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DM558_06930 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DM558_13735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DM558_09605 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DM558_13435 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DM558_12795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DM558_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DM558_14065 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D DM558_11415 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DM558_12435 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DM558_05205 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DM558_05215 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DM558_07915 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:emo03036]
D DM558_08765 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DM558_07245 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_07325 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_07940 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_05855 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D DM558_14045 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D DM558_01155 DNA-binding protein K05516 cbpA; curved DNA-binding protein
D DM558_01160 chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D DM558_12460 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DM558_05380 DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D DM558_13910 RNA chaperone Hfq K03666 hfq; host factor-I protein
D DM558_03440 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DM558_13020 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DM558_07935 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D DM558_08050 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D DM558_12715 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D DM558_12720 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D DM558_09345 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DM558_11770 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D DM558_13800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DM558_09395 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DM558_08255 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DM558_09400 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D DM558_09350 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D DM558_09370 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D DM558_13795 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DM558_09340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DM558_00870 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D DM558_03020 cell division protein ZapA K09888 zapA; cell division protein ZapA
D DM558_00730 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D DM558_11290 cell division protein ZapE K06916 zapE; cell division protein ZapE
D DM558_13925 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DM558_12105 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DM558_08415 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D DM558_08420 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DM558_08425 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D DM558_14810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DM558_14805 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D DM558_14800 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D DM558_10990 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D DM558_12620 ParA family protein K03496 parA; chromosome partitioning protein
D DM558_12625 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DM558_05205 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DM558_05215 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DM558_12610 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DM558_12615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DM558_11455 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D DM558_13015 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DM558_08055 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DM558_11905 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:emo03400]
D DM558_15040 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DM558_14440 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D DM558_08060 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DM558_12860 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DM558_12000 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DM558_03590 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DM558_09420 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DM558_11310 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DM558_01860 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DM558_11530 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DM558_07990 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DM558_03865 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DM558_14585 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DM558_10415 deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D DM558_04015 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DM558_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DM558_12795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DM558_13335 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D DM558_05280 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D DM558_14145 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D DM558_01110 endonuclease K05984 cho; excinuclease Cho [EC:3.1.25.-]
D DM558_12745 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DM558_14275 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DM558_14280 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DM558_13685 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DM558_15495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DM558_06015 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DM558_05415 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DM558_13920 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D DM558_00800 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D DM558_08595 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DM558_05775 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DM558_14215 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DM558_12455 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DM558_00110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DM558_09000 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DM558_06930 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DM558_13735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DM558_09605 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DM558_03885 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_04350 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_06430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_07785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_10720 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_14410 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DM558_11610 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DM558_14405 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DM558_14965 recA; recombinase RecA K03553 recA; recombination protein RecA
D DM558_14465 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DM558_14470 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DM558_14460 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DM558_00040 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DM558_12520 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DM558_12450 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D DM558_15515 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DM558_08990 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DM558_09595 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DM558_12175 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DM558_03690 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D DM558_09285 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D DM558_11415 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DM558_12435 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DM558_07915 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DM558_07245 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_07325 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_07940 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DM558_00305 recT; recombination protein RecT K07455 recT; recombination protein RecT
D DM558_05380 DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D DM558_05855 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D DM558_14045 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D DM558_08655 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DM558_09445 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DM558_02980 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D DM558_01120 LexA family transcriptional regulator K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_02985 LexA family transcriptional regulator K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_06075 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_07490 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D DM558_14960 regulatory protein RecX K03565 recX; regulatory protein
D DM558_13145 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D DM558_08160 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D DM558_04010 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DM558_04005 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:emo03029]
D DM558_02305 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DM558_05810 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DM558_13360 elongation factor Ts K02357 tsf; elongation factor Ts
D DM558_14300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DM558_14295 fusA; elongation factor G K02355 fusA; elongation factor G
D DM558_08760 GTPase Era K03595 era; GTPase
D DM558_15575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DM558_09010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DM558_14450 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DM558_00050 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DM558_14820 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DM558_14825 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DM558_14815 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DM558_03885 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_04350 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_06430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_07785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_10720 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DM558_13405 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D DM558_13105 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DM558_13100 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D DM558_11470 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DM558_11475 co-chaperone GroES K04078 groES; chaperonin GroES
D DM558_13110 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DM558_06875 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DM558_06890 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D DM558_14005 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D DM558_08055 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DM558_11880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DM558_12480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DM558_09710 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_12060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:emo02000]
D DM558_05645 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D DM558_05640 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D DM558_14025 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DM558_07995 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DM558_02480 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DM558_11025 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DM558_04900 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D DM558_13175 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DM558_14705 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DM558_14710 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DM558_14715 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DM558_14720 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DM558_06680 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DM558_06685 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D DM558_06690 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DM558_12230 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DM558_12225 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D DM558_12220 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DM558_09895 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DM558_09885 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D DM558_09890 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DM558_00970 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D DM558_00955 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D DM558_00960 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D DM558_00965 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DM558_12535 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DM558_12540 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DM558_12550 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DM558_12545 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DM558_12530 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DM558_12160 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DM558_08620 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D DM558_08615 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DM558_10075 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DM558_10010 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D DM558_09990 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D DM558_09995 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D DM558_10005 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D DM558_01790 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DM558_01785 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DM558_01780 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DM558_01795 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DM558_01800 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D DM558_05540 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D DM558_05535 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D DM558_05530 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D DM558_05525 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DM558_12570 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D DM558_12575 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D DM558_12580 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D DM558_02385 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DM558_10910 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DM558_10915 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DM558_02395 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DM558_02400 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DM558_10905 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DM558_02390 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DM558_10900 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DM558_02785 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein
D DM558_02780 ABC transporter permease subunit K15585 nikB; nickel transport system permease protein
D DM558_02775 ABC transporter permease subunit K15586 nikC; nickel transport system permease protein
D DM558_02770 ABC transporter ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DM558_02765 ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DM558_13475 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D DM558_13470 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D DM558_13465 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D DM558_13460 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D DM558_01240 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D DM558_01245 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D DM558_01250 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D DM558_05170 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D DM558_08980 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DM558_04605 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D DM558_08975 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D DM558_04600 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DM558_08970 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DM558_13205 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D DM558_03340 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D DM558_03345 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D DM558_03350 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D DM558_10850 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DM558_10835 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D DM558_10840 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DM558_06520 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D DM558_06515 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D DM558_06525 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D DM558_06510 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DM558_07190 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D DM558_07195 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D DM558_01755 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DM558_04675 ABC transporter permease K25187 pltK; pyoluteorin transport system permease protein
D DM558_04670 ABC transporter permease K25188 pltJ; pyoluteorin transport system permease protein
D DM558_04665 ABC transporter ATP-binding protein K25189 pltI; pyoluteorin transport system ATP-binding protein
D DM558_04660 HlyD family efflux transporter periplasmic adaptor subunit K25190 pltH; membrane fusion protein PltH
D DM558_05175 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D DM558_05185 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D DM558_05180 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DM558_13795 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DM558_13800 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DM558_00255 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D DM558_00260 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D DM558_04345 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DM558_14975 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D DM558_14980 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DM558_02565 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DM558_08400 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DM558_02570 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DM558_08395 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DM558_09970 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D DM558_00055 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D DM558_04250 MFS transporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D DM558_03185 proP; proline/glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D DM558_06695 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D DM558_05435 MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter
D DM558_10555 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D DM558_02160 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D DM558_14615 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D DM558_01540 MFS transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D DM558_10145 MFS transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D DM558_04755 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D DM558_04770 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D DM558_06790 MFS transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D DM558_06650 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DM558_06655 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DM558_03705 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DM558_03855 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DM558_04930 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DM558_14950 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D DM558_05500 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DM558_10855 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D DM558_08490 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D DM558_00575 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D DM558_12910 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D DM558_12515 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D DM558_09165 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D DM558_00135 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D DM558_00125 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DM558_15130 voltage-gated potassium channel protein K10716 kch; voltage-gated potassium channel
D DM558_10105 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D DM558_15330 ammonium transporter K03320 amt; ammonium transporter, Amt family
D DM558_09950 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DM558_14205 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DM558_03205 stringent starvation protein A K03599 sspA; stringent starvation protein A
D DM558_08680 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D DM558_08685 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D DM558_11090 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D DM558_01015 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D DM558_01345 focA; formate transporter FocA K06212 focA; formate transporter
D DM558_12525 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D DM558_11525 mscK; mechanosensitive channel MscK K05802 mscK; potassium-dependent mechanosensitive channel
D DM558_04100 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D DM558_08625 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D DM558_13775 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D DM558_02795 yut; urea transporter K08717 utp; urea transporter
D DM558_00565 hypothetical protein K03561 exbB; biopolymer transport protein ExbB
D DM558_00890 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D DM558_15005 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D DM558_00895 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D DM558_15000 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D DM558_14480 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D DM558_14485 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D DM558_08550 magnesium transporter K03284 corA; magnesium transporter
D DM558_05845 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D DM558_01670 bestrophin K08994 yneE; ion channel-forming bestrophin family protein
D DM558_11735 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DM558_11305 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DM558_04450 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_06770 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_08205 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_01940 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_02515 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_04445 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_10430 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_10870 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_12820 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_09120 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D DM558_13180 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D DM558_03335 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D DM558_04495 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D DM558_01230 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D DM558_02360 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DM558_04590 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DM558_05705 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DM558_09240 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DM558_15370 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DM558_06735 efflux transporter outer membrane subunit K07796 cusC; outer membrane protein, copper/silver efflux system
D DM558_11300 channel protein TolC K12340 tolC; outer membrane protein
D DM558_12095 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D DM558_04895 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_08630 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10055 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10100 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_13405 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D DM558_05870 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D DM558_03675 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D DM558_15055 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D DM558_13280 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D DM558_03825 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D DM558_03820 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D DM558_01760 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D DM558_01765 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D DM558_01730 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D DM558_09005 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D DM558_10770 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D DM558_07160 CidA/LrgA family protein K06518 cidA; holin-like protein
D DM558_02410 pduA; propanediol utilization microcompartment protein PduA K27260 pduA; bacterial microcompartment shell protein
D DM558_10180 eutM; ethanolamine utilization microcompartment protein EutM K04027 eutM; ethanolamine utilization protein EutM
D DM558_05490 amino acid permease K11733 lysP; lysine-specific permease
D DM558_10735 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP
D DM558_15535 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D DM558_14400 amino acid permease K16234 hutT; histidine transporter
D DM558_10120 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D DM558_11760 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D DM558_06720 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D DM558_12100 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D DM558_04535 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump
D DM558_04285 mdtB; MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D DM558_07460 acriflavine resistance protein B K07788 mdtB; multidrug efflux pump
D DM558_04290 acriflavine resistance protein B K07789 mdtC; multidrug efflux pump
D DM558_03640 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D DM558_10790 mdtI; multidrug/spermidine efflux SMR transporter subunit MdtI K11742 mdtI; spermidine export protein MdtI
D DM558_10795 QacE family quaternary ammonium compound efflux SMR transporter K11743 mdtJ; spermidine export protein MdtJ
D DM558_10365 O-acetylserine/cysteine exporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D DM558_08565 permease DsdX K13629 dsdX; D-serine transporter
D DM558_03630 L-lactate permease K03303 lutP; lactate permease
D DM558_15455 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D DM558_07005 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter
D DM558_10515 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D DM558_08250 anion permease K16322 pit; low-affinity inorganic phosphate transporter
D DM558_05370 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D DM558_06555 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D DM558_07165 gltP; glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein
D DM558_05140 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D DM558_01520 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D DM558_02465 hypothetical protein K03315 nhaC; Na+:H+ antiporter, NhaC family
D DM558_14525 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D DM558_03070 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D DM558_03060 cation:proton antiport protein K26735 KEA4_5_6; K+:H+ antiporter
D DM558_14750 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D DM558_11255 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D DM558_11615 uracil permease K02824 uraA; uracil permease
D DM558_00075 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D DM558_09270 tryptophan permease K03835 mtr; tryptophan-specific transport protein
D DM558_12800 anion permease K11106 ttdT; L-tartrate/succinate antiporter
D DM558_06025 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D DM558_11490 hypothetical protein K03281 clcA; chloride channel protein, CIC family
D DM558_10865 dauA; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family
D DM558_01715 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D DM558_11495 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D DM558_01605 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D DM558_04695 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D DM558_06740 permease K13936 mdcF; malonate transporter and related proteins
D DM558_07315 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D DM558_11040 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D DM558_13240 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D DM558_01565 AEC family transporter K24180 mleP; malate permease and related proteins
D DM558_07355 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D DM558_14000 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D DM558_12485 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D DM558_01480 threonine export protein RhtC K05835 rhtC; threonine efflux protein
D DM558_09535 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D DM558_04210 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D DM558_04215 AzlD family protein K26606 azlD; branched chain amino acid efflux pump
D DM558_05485 hypothetical protein K23675 fmnP; riboflavin transporter
D DM558_08985 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D DM558_09425 MarC family NAAT transporter K05595 marC; multiple antibiotic resistance protein
D DM558_09370 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D DM558_08600 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D DM558_10310 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D DM558_10300 hypothetical protein K07230 p19; periplasmic iron binding protein
D DM558_12765 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D DM558_10955 energy transducer TonB K03832 tonB; periplasmic protein TonB
D DM558_14995 energy transducer TonB K03832 tonB; periplasmic protein TonB
D DM558_14505 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D DM558_14490 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D DM558_14500 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein
D DM558_04720 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D DM558_04710 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D DM558_06660 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06665 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DM558_06675 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DM558_05505 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D DM558_06725 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D DM558_12105 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DM558_04540 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system
D DM558_04280 mdtA; MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D DM558_07465 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D DM558_02475 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D DM558_11020 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D DM558_01700 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D DM558_14845 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D DM558_14850 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D DM558_14855 feoB; Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B
D DM558_12205 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:emo02044]
D DM558_11300 channel protein TolC K12340 tolC; outer membrane protein
D DM558_00270 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DM558_02340 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DM558_01180 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D DM558_11815 pilin K02650 pilA; type IV pilus assembly protein PilA
D DM558_13060 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D DM558_02350 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D DM558_02345 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D DM558_00830 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D DM558_12880 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D DM558_05895 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D DM558_10945 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D DM558_10940 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D DM558_10935 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D DM558_10930 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D DM558_02240 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DM558_02245 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D DM558_02250 pilus assembly protein PilP K02664 pilO; type IV pilus assembly protein PilO
D DM558_02255 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D DM558_02260 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DM558_07405 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DM558_07400 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D DM558_00815 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D DM558_12900 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D DM558_08475 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_12885 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_14360 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_14445 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_06925 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D DM558_07360 hypothetical protein K27041 fimL; scaffold protein FimL
D DM558_00810 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D DM558_07910 hypothetical protein K08086 fimV; pilus assembly protein FimV
D DM558_15235 hypothetical protein K08086 fimV; pilus assembly protein FimV
D DM558_07415 YggT family protein K02221 yggT; YggT family protein
D DM558_10660 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D DM558_00885 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D DM558_07925 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DM558_01940 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_02515 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_04445 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_10430 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_10870 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_12820 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D DM558_10590 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D DM558_10595 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D DM558_10600 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D DM558_10630 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D DM558_10635 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D DM558_10645 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D DM558_10650 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D DM558_10575 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D DM558_01025 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_02610 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_02650 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_05100 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_06830 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_09795 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_11180 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_12280 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D DM558_10640 tssE; type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein
D DM558_10605 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D DM558_10625 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D DM558_10655 tssA; type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ
D DM558_10610 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI
D DM558_10620 sigma-54-dependent Fis family transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator
D DM558_10585 serine/threonine-protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D DM558_10580 serine/threonine protein kinase K11916 stk1; serine/threonine-protein kinase Stk1 [EC:2.7.11.-]
D DM558_01275 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_04000 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_06760 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_08215 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_08220 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_11800 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_14955 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_06765 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_08210 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_04450 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_06770 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_08205 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_03580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DM558_12935 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DM558_08335 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DM558_15400 hypothetical protein K03072 secD; preprotein translocase subunit SecD
D DM558_14245 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DM558_08330 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DM558_07830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D DM558_13660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D DM558_14760 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DM558_13805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DM558_08340 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DM558_12480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:emo02042]
D DM558_11735 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:emo02022]
D DM558_05510 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DM558_05515 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DM558_03115 HAMP domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D DM558_03110 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D DM558_13865 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DM558_13860 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DM558_04195 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D DM558_12690 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D DM558_14180 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D DM558_14185 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D DM558_06715 HAMP domain-containing protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DM558_06710 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DM558_14125 qseC; two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D DM558_14130 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D DM558_01300 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DM558_01305 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DM558_04550 sensor histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D DM558_04545 DNA-binding response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D DM558_12680 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DM558_02860 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DM558_02865 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DM558_06635 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D DM558_06640 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DM558_04465 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D DM558_04470 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D DM558_13230 GHKL domain-containing protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D DM558_13225 response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D DM558_07305 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DM558_07310 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DM558_15560 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DM558_00220 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DM558_00215 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D DM558_10945 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D DM558_10940 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D DM558_02425 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D DM558_03800 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D DM558_03805 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
C 02035 Bacterial motility proteins [BR:emo02035]
D DM558_10660 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D DM558_10945 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D DM558_10940 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D DM558_10935 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D DM558_10930 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D DM558_00215 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D DM558_00220 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DM558_07405 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DM558_07400 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D DM558_10920 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D DM558_01180 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D DM558_11815 pilin K02650 pilA; type IV pilus assembly protein PilA
D DM558_13060 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D DM558_02350 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D DM558_02345 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D DM558_02340 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DM558_05895 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D DM558_02260 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DM558_02255 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D DM558_02250 pilus assembly protein PilP K02664 pilO; type IV pilus assembly protein PilO
D DM558_02245 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D DM558_02240 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DM558_06925 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D DM558_00815 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D DM558_12900 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D DM558_08475 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_12885 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_14360 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_14445 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D DM558_00830 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D DM558_12880 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D DM558_01275 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_04000 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_06760 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_08215 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_08220 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_11800 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_14955 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DM558_06765 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_08210 molecular chaperone K07346 fimC; fimbrial chaperone protein
D DM558_04450 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_06770 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D DM558_08205 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:emo04812]
D DM558_14810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DM558_09340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DM558_09345 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DM558_08415 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D DM558_08420 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DM558_08425 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D DM558_12620 ParA family protein K03496 parA; chromosome partitioning protein
D DM558_12625 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:emo04147]
D DM558_09710 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_12060 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D DM558_10525 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_13085 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DM558_12140 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DM558_11360 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DM558_10510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_11220 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DM558_04240 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DM558_11470 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DM558_13105 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DM558_09435 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DM558_12780 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DM558_05225 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DM558_14300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DM558_14350 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DM558_05430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DM558_00840 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DM558_00195 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DM558_13965 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DM558_10705 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DM558_11985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DM558_03230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DM558_03815 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DM558_10400 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DM558_00095 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DM558_10045 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DM558_13065 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DM558_05385 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DM558_08295 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DM558_15200 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D DM558_07835 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DM558_09230 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:emo02048]
D DM558_11955 type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DM558_11155 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DM558_11150 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DM558_04410 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D DM558_09340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DM558_14810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DM558_05205 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DM558_05215 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DM558_11275 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DM558_08795 hypothetical protein K19168 cptA; toxin CptA
D DM558_08800 succinate dehydrogenase assembly factor 2 family protein K09159 cptB; antitoxin CptB
D DM558_06875 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:emo01504]
D DM558_03735 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D DM558_05920 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D DM558_10855 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D DM558_06715 HAMP domain-containing protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DM558_06710 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DM558_04895 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_08630 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10055 porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_10100 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D DM558_11635 vancomycin resistance protein K18346 vanW; vancomycin resistance protein VanW
D DM558_00975 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D DM558_03115 HAMP domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D DM558_03110 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D DM558_12105 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DM558_12100 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D DM558_12095 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D DM558_10355 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D DM558_04550 sensor histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D DM558_04545 DNA-binding response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D DM558_04540 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system
D DM558_04535 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump
D DM558_11300 channel protein TolC K12340 tolC; outer membrane protein
D DM558_04470 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:emo00536]
D DM558_12345 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:emo00537]
D DM558_10045 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:emo03200]
D DM558_00555 lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:emo03100]
D DM558_02760 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_09635 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_10445 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_11240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_11690 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DM558_11095 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_13780 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_13785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_02880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_05590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DM558_05740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DM558_10275 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DM558_01075 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DM558_12970 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DM558_09975 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DM558_14840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DM558_03540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DM558_14230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DM558_09980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DM558_02875 tRNA-His K14226 tRNA-His; tRNA His
D DM558_09640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_10450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_11245 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_11695 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DM558_00700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_02870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_04475 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_07825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DM558_08230 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DM558_05730 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DM558_05600 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DM558_02290 tRNA-Met K14230 tRNA-Met; tRNA Met
D DM558_07055 tRNA-Met K14230 tRNA-Met; tRNA Met
D DM558_10250 tRNA-Met K14230 tRNA-Met; tRNA Met
D DM558_12870 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DM558_05735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DM558_11210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DM558_05605 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DM558_06580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DM558_09720 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DM558_01020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DM558_04330 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DM558_14235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DM558_14240 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DM558_14225 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DM558_00275 tRNA-Val K14237 tRNA-Val; tRNA Val
D DM558_10270 tRNA-Val K14237 tRNA-Val; tRNA Val
D DM558_11700 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_09645 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_11250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_10455 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DM558_10440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_09630 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_11235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_11685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DM558_09625 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_11230 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_11680 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_10435 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DM558_13765 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D DM558_09315 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D DM558_09485 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DM558_02725 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D DM558_11485 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D DM558_02715 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D DM558_14940 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D DM558_03850 flavodoxin family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D DM558_09105 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D DM558_10715 NAD(P)H dehydrogenase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D DM558_02915 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D DM558_08915 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DM558_10335 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DM558_13195 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DM558_02910 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D DM558_15265 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D DM558_00085 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DM558_13190 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D DM558_09210 NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D DM558_07840 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DM558_14070 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D DM558_14100 glutaredoxin family protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D DM558_12265 hypothetical protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DM558_05820 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DM558_10095 pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DM558_14565 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DM558_01380 4Fe-4S dicluster domain-containing protein K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D DM558_01385 hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D DM558_01390 hycD; hydrogenase 3 membrane subunit K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D DM558_01395 hydrogenase 4 subunit D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D DM558_01400 hydrogenase 4 membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D DM558_01405 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D DM558_01410 hydrogenase large subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D DM558_01420 nuoB; NADH-quinone oxidoreductase subunit NuoB K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D DM558_01425 hycH; formate hydrogenlyase maturation protein HycH K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D DM558_00025 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DM558_15300 tehB; SAM-dependent methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D DM558_07035 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D DM558_15435 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D DM558_04685 mdcH; malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D DM558_10765 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DM558_15080 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D DM558_01105 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D DM558_05935 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D DM558_14315 DUF3488 domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D DM558_05930 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D DM558_04715 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D DM558_14625 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D DM558_01525 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D DM558_15630 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DM558_05335 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D DM558_11085 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D DM558_04690 malonate decarboxylase holo-ACP synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D DM558_04180 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D DM558_10330 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DM558_15010 Appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DM558_03380 SMP-30/gluconolactonase/LRE family protein K02352 drp35; lactonase [EC:3.1.1.-]
D DM558_05045 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DM558_13745 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DM558_08650 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D DM558_12705 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D DM558_08240 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D DM558_06065 deoxyribonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D DM558_00180 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DM558_00640 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DM558_06920 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DM558_01135 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D DM558_10290 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D DM558_15020 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D DM558_03460 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D DM558_15095 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DM558_03445 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DM558_06985 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D DM558_08665 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DM558_14305 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DM558_04705 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D DM558_04700 mdcE; biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D DM558_01550 altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D DM558_13935 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D DM558_03450 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D DM558_01530 adenine nucleotide alpha hydrolase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D DM558_13490 cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D DM558_01535 LarC family nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D DM558_15160 NAD(P)H-hydrate epimerase K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6]
D DM558_09550 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D DM558_04270 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D DM558_08555 cation-transporting P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D DM558_09150 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D DM558_09050 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D DM558_03625 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D DM558_03620 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D DM558_03615 lactate utilization protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D DM558_02450 diol dehydratase reactivase subunit alpha K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D DM558_02455 glycerol dehydratase K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D DM558_01335 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D DM558_12025 fdrA; acyl-CoA synthetase FdrA K02381 fdrA; FdrA protein
D DM558_05410 ferredoxin family protein K05524 fdxA; ferredoxin
D DM558_01435 4Fe-4S dicluster domain-containing protein K05796 hydN; electron transport protein HydN
D DM558_01415 hydrogenase 4 subunit H K12143 hyfH; hydrogenase-4 component H
D DM558_06880 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D DM558_13155 tcuB; tricarballylate utilization 4Fe-4S protein TcuB K13795 citB; citrate/tricarballylate utilization protein
D DM558_13160 tcuA; FAD-dependent tricarballylate dehydrogenase TcuA K13796 cobZ; tricarballylate dehydrogenase
D DM558_00390 hypothetical protein K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D DM558_15195 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DM558_01570 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein
D DM558_10205 eutH; ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D DM558_10195 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D DM558_10230 BMC domain-containing protein K04025 eutK; ethanolamine utilization protein EutK
D DM558_10225 eutL; ethanolamine utilization microcompartment protein EutL K04026 eutL; ethanolamine utilization protein EutL
D DM558_10185 ethanolamine utilization microcompartment protein EutN K04028 eutN; ethanolamine utilization protein EutN
D DM558_10160 eutP; EutP/PduV family microcompartment system protein K04029 eutP; ethanolamine utilization protein EutP
D DM558_10165 eutQ; ethanolamine utilization acetate kinase EutQ K04030 eutQ; ethanolamine utilization protein EutQ
D DM558_10155 eutS; ethanolamine utilization microcompartment protein EutS K04031 eutS; ethanolamine utilization protein EutS
D DM558_07410 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DM558_14040 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D DM558_00600 hypothetical protein K02498 hemY; HemY protein
D DM558_00240 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D DM558_00245 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D DM558_06050 Sterol-binding domain protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D DM558_10235 electron transport complex protein RnfC K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
D DM558_09015 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D DM558_09180 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D DM558_15135 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DM558_03490 cold-shock protein K03704 cspA; cold shock protein
D DM558_03665 cold-shock protein K03704 cspA; cold shock protein
D DM558_04110 cold-shock protein K03704 cspA; cold shock protein
D DM558_06195 cold-shock protein K03704 cspA; cold shock protein
D DM558_08610 cold-shock protein K03704 cspA; cold shock protein
D DM558_10255 cold-shock protein K03704 cspA; cold shock protein
D DM558_06165 hypothetical protein K07741 antB; anti-repressor protein
D DM558_15325 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D DM558_15290 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D DM558_11980 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D DM558_08725 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DM558_07265 trigger factor K03545 tig; trigger factor
D DM558_02815 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D DM558_02810 urease accessory protein UreF K03188 ureF; urease accessory protein
D DM558_02805 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D DM558_02800 urease accessory protein K03190 ureD; urease accessory protein
D DM558_12085 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D DM558_01365 hypC; HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D DM558_01360 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D DM558_01355 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D DM558_01350 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D DM558_15450 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D DM558_15390 OsmC family protein K07397 yhfA; putative redox protein
D DM558_15310 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D DM558_08105 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D DM558_11270 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D DM558_15365 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D DM558_07105 YraN family protein K07460 yraN; putative endonuclease
D DM558_14685 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D DM558_15105 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D DM558_06285 terminase small subunit K07474 xtmA; phage terminase small subunit
D DM558_07635 terminase small subunit K07474 xtmA; phage terminase small subunit
D DM558_08265 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D DM558_02705 hypothetical protein K07497 K07497; putative transposase
D DM558_12260 hypothetical protein K07497 K07497; putative transposase
D DM558_12420 integrase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D DM558_09600 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DM558_00930 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D DM558_11630 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D DM558_08875 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D DM558_00585 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D DM558_12700 septation protein A K06190 ispZ; intracellular septation protein
D DM558_12070 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D DM558_08815 lpoB; penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D DM558_14320 universal stress protein K06149 uspA; universal stress protein A
D DM558_09475 universal stress protein UspA K14055 uspE; universal stress protein E
D DM558_11215 universal stress protein UspA K14055 uspE; universal stress protein E
D DM558_08575 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D DM558_10780 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D DM558_08260 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D DM558_13845 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D DM558_07300 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D DM558_03095 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D DM558_13410 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D DM558_00030 LysM peptidoglycan-binding domain-containing protein K06194 nlpD; lipoprotein NlpD
D DM558_13960 outer membrane protein OmpW K07275 ompW; outer membrane protein
D DM558_00755 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D DM558_12855 AsmA family protein K07289 asmA; AsmA protein
D DM558_14550 hypothetical protein K07340 ybbJ; inner membrane protein
D DM558_00265 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D DM558_14175 creD; cell envelope integrity protein CreD K06143 creD; inner membrane protein
D DM558_05890 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
D DM558_04875 DUF1656 domain-containing protein K21695 aaeX; protein AaeX
D DM558_05830 pduB; propanediol utilization microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein
D DM558_02415 pduB; propanediol utilization microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein
D DM558_10240 BMC domain-containing protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D DM558_05520 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D DM558_13835 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D DM558_15530 TerC/Alx family metal homeostasis membrane protein K05794 terC; tellurite resistance protein TerC
D DM558_00765 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D DM558_11430 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D DM558_07030 hutX; heme utilization cystosolic carrier protein HutX K07227 chuX; heme iron utilization protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DM558_12130 hypothetical protein K02442 glpM; membrane protein GlpM
D DM558_07235 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D DM558_14395 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D DM558_09555 patatin K07001 K07001; NTE family protein
D DM558_14655 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D DM558_14075 YihY family inner membrane protein K07058 K07058; membrane protein
D DM558_11480 hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D DM558_13485 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D DM558_09200 hflD; lysogenization regulator HflD K07153 hflD; high frequency lysogenization protein
D DM558_10550 glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein
D DM558_05835 LemA family protein K03744 lemA; LemA protein
D DM558_04885 hypothetical protein K03745 slyX; SlyX protein
D DM558_05910 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D DM558_05760 hypothetical protein K03749 dedD; DedD protein
D DM558_02275 hypothetical protein K03112 damX; DamX protein
D DM558_14385 paraquat-inducible membrane protein A K03808 pqiA; paraquat-inducible protein A
D DM558_14390 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D DM558_00935 hypothetical protein K08985 K08985; putative lipoprotein
D DM558_11555 DUF1440 domain-containing protein K08996 yagU; putative membrane protein
D DM558_04140 hypothetical protein K09858 K09858; SEC-C motif domain protein
D DM558_10825 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D DM558_06190 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D DM558_09910 hypothetical protein K06872 K06872; uncharacterized protein
D DM558_03505 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D DM558_13035 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D DM558_14990 ATP-binding protein K06923 K06923; uncharacterized protein
D DM558_10340 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D DM558_14150 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D DM558_15205 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D DM558_05990 GTP-binding protein K06945 K06945; uncharacterized protein
D DM558_08710 GTP-binding protein K06945 K06945; uncharacterized protein
D DM558_10675 N-acetyltransferase K06975 K06975; uncharacterized protein
D DM558_04975 DUF861 domain-containing protein K06995 K06995; uncharacterized protein
D DM558_05220 esterase K07000 K07000; uncharacterized protein
D DM558_05620 hypothetical protein K07003 K07003; uncharacterized protein
D DM558_12600 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein
D DM558_11975 hypothetical protein K07028 K07028; uncharacterized protein
D DM558_11045 acetate uptake transporter K07034 K07034; uncharacterized protein
D DM558_08660 YecA family protein K07039 K07039; uncharacterized protein
D DM558_05350 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D DM558_12125 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein
D DM558_01635 nucleotidyltransferase K07074 K07074; uncharacterized protein
D DM558_01640 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D DM558_07370 hypothetical protein K07090 K07090; uncharacterized protein
D DM558_15315 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DM558_15625 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DM558_14835 hypothetical protein K07098 K07098; uncharacterized protein
D DM558_01315 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D DM558_03530 NAD-dependent epimerase/dehydratase family protein K07118 K07118; uncharacterized protein
D DM558_15240 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D DM558_07100 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D DM558_00690 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_00695 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_01255 hypothetical protein K07126 K07126; uncharacterized protein
D DM558_03000 toxin-antitoxin system YwqK family antitoxin K07126 K07126; uncharacterized protein
D DM558_03950 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_04105 hypothetical protein K07126 K07126; uncharacterized protein
D DM558_04395 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_04415 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_06040 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_06965 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_07180 toxin-antitoxin system YwqK family antitoxin K07126 K07126; uncharacterized protein
D DM558_08440 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_09510 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_10695 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_10810 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_13185 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_14905 toxin-antitoxin system YwqK family antitoxin K07126 K07126; uncharacterized protein
D DM558_15175 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DM558_05985 hypothetical protein K07131 K07131; uncharacterized protein
D DM558_08705 hypothetical protein K07131 K07131; uncharacterized protein
D DM558_12475 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D DM558_11595 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D DM558_04585 hypothetical protein K09138 K09138; uncharacterized protein
D DM558_11010 DUF493 family protein K09158 K09158; uncharacterized protein
D DM558_01585 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D DM558_03745 YqcI/YcgG family protein K09190 K09190; uncharacterized protein
D DM558_03910 DUF333 domain-containing protein K09712 K09712; uncharacterized protein
D DM558_06410 DUF333 domain-containing protein K09712 K09712; uncharacterized protein
D DM558_06840 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D DM558_12695 YciI family protein K09780 K09780; uncharacterized protein
D DM558_00905 Trm112 family protein K09791 K09791; uncharacterized protein
D DM558_09280 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D DM558_11780 DUF459 domain-containing protein K09795 K09795; uncharacterized protein
D DM558_10725 RnfH family protein K09801 K09801; uncharacterized protein
D DM558_00950 HrgA protein K09805 K09805; uncharacterized protein
D DM558_08825 hypothetical protein K09859 K09859; uncharacterized protein
D DM558_06470 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D DM558_02330 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D DM558_03025 hypothetical protein K09895 K09895; uncharacterized protein
D DM558_14080 YheU family protein K09898 K09898; uncharacterized protein
D DM558_08955 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D DM558_12605 DUF1043 family protein K09908 K09908; uncharacterized protein
D DM558_06465 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D DM558_08865 DUF1315 family protein K09916 K09916; uncharacterized protein
D DM558_04150 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D DM558_13515 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D DM558_11450 DUF484 family protein K09921 K09921; uncharacterized protein
D DM558_13440 hypothetical protein K09922 K09922; uncharacterized protein
D DM558_03550 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein
D DM558_10760 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D DM558_12015 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein
D DM558_02555 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D DM558_02560 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D DM558_11260 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein
D DM558_13005 TraB/GumN family protein K09973 K09973; uncharacterized protein
D DM558_08375 DUF1287 domain-containing protein K09974 K09974; uncharacterized protein
D DM558_14420 hypothetical protein K09975 K09975; uncharacterized protein
D DM558_04500 DUF1318 domain-containing protein K09978 K09978; uncharacterized protein
D DM558_05305 hypothetical protein K09979 K09979; uncharacterized protein
D DM558_03760 DUF2170 family protein K09980 K09980; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024