+E Transcription factors KO
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Transcription Factors - Enterococcus mundtii
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D EMQU_0778 putative DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EMQU_2511 putative DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EMQU_2883 bbvIM; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D EMQU_0514 MSM (multiple sugar metabolism) operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
C LysR family
D EMQU_2320 lysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D EMQU_1650 lacR; lactose PTS family porter repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D EMQU_1610 deoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D EMQU_1816 deoR family transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
C LacI family
D EMQU_0063 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_0386 lacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_0420 rbsR; ribose transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_1391 galR protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_1588 lacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_1720 galR2; lacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_1018 lacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_1943 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D EMQU_2611 scrR-1; sucrose operon repressor ScrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D EMQU_1841 araR; gntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D EMQU_2666 transcriptional repressor of the arabinose operon K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D EMQU_0166 gntR family transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D EMQU_1035 gntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D EMQU_0256 regulatory protein, GntR family protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D EMQU_1974 gntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D EMQU_0467 gntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D EMQU_1536 gntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D EMQU_2184 gntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
C TetR/AcrR family
D EMQU_2077 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
C Lrp/AsnC family
C LuxR family
C MarR family
D EMQU_0345 marR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D EMQU_1454 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D EMQU_0711 regulatory protein GlnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D EMQU_1510 MerR family transcriptional regulator K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene
D EMQU_0822 merR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D EMQU_1940 merR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D EMQU_1067 FUR family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D EMQU_1922 zurR; fur family transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D EMQU_1278 fur2; fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
D EMQU_0233 iclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D EMQU_1698 arginine deiminase pathway transcriptional regulator, Crp family protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
C Rrf2 family
C ArsR family
D EMQU_0482 transcription regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D EMQU_1924 arsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
C PadR family
D EMQU_0394 regulator of phenolic acid metabolism PadR K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D EMQU_0404 transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D EMQU_1212 padR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D EMQU_0869 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D EMQU_0412 transcriptional regulator GlvR K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D EMQU_2834 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D EMQU_2796 Rgg, putative K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D EMQU_0058 transcriptional regulator K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D EMQU_2740 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D EMQU_2434 sigma-54 dependent DNA-binding response regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D EMQU_0695 redox-sensing transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D EMQU_2084 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D EMQU_1114 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D EMQU_1484 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D EMQU_1329 ISH7A (ISNCY family) transposase K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D EMQU_0195 DNA-damage-inducible protein J K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D EMQU_1931 transcriptional antiterminator bglG/CAT RNA-binding protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D EMQU_0300 bglG2; transcriptional antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D EMQU_2187 bglG family transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D EMQU_2379 mtlR; mannitol operon transcriptional antiterminator K03483 mtlR; mannitol operon transcriptional activator
D EMQU_1857 srlM; putative transcriptional activator SrlM K03491 licR; probable licABCH operon transcriptional regulator
D EMQU_2680 transcriptional antiterminator bglG K03491 licR; probable licABCH operon transcriptional regulator
C Others
D EMQU_0292 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D EMQU_2876 spo0J; stage 0 DNA-binding protein spoOJ K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D EMQU_0566 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D EMQU_0842 argR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D EMQU_1687 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D EMQU_1655 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D EMQU_2864 ctsR; ctsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D EMQU_2017 sorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator
D EMQU_1336 pyrR; pyrimidine operon attenuation protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D EMQU_1547 nrdR; nrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D EMQU_0851 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0