+E Transcription factors KO
#
Transcription Factors - Escherichia coli O26:H11 11368 (EHEC)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D ECO26_2847 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D ECO26_0066 araC; DNA-binding transcriptional dual regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D ECO26_5550 hpaA; regulator of the 4HPA-hydroxylase operon K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D ECO26_4678 rhaR; DNA-binding transcriptional activator RhaR, L-rhamnose-binding K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D ECO26_2510 chbR; DNA-binding transcriptional dual regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D ECO26_5228 adiY; DNA-binding transcriptional activator AdiY K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D ECO26_3489 yfeG; predicted DNA-binding transcriptional regulator, ARAC-type K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D ECO26_2863 predicted DNA-binding transcriptional regulator K05372 ybtA; AraC family transcriptional regulator
D ECO26_0632 envY; DNA-binding transcriptional activator EnvY of porin biosynthesis K11920 envY; AraC family transcriptional regulator
D ECO26_5179 soxS; DNA-binding transcriptional dual regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECO26_2133 marA; DNA-binding transcriptional dual activator MarA of multiple antibiotic resistance K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECO26_5602 rob; DNA-binding transcriptional activator Rob K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECO26_1988 feaR; DNA-binding transcriptional dual regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D ECO26_0339 ykgD; predicted DNA-binding transcriptional regulator, ARAC-type K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D ECO26_4605 gadW; DNA-binding transcriptional activator GadW K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D ECO26_4606 gadX; DNA-binding transcriptional dual regulator GadX K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D ECO26_5230 melR; DNA-binding transcriptional dual regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D ECO26_2557 yeaM; predicted DNA-binding transcriptional regulator, ARAC-type K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D ECO26_3140 ada; fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D ECO26_3878 gcvA; DNA-binding transcriptional dual regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D ECO26_4813 ilvY; DNA-binding transcriptional dual regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D ECO26_4757 metR; DNA-binding transcriptional activator MetR, homocysteine-binding K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D ECO26_0018 nhaR; DNA-binding transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D ECO26_5078 oxyR; DNA-binding transcriptional dual regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D ECO26_4003 argP; DNA-binding transcriptional activator ArgP, replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D ECO26_0079 leuO; DNA-binding transcriptional activator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D ECO26_3584 hcaR; DNA-binding transcriptional activator HcaR of 3-phenylpropionic acid catabolism K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D ECO26_4223 tdcA; DNA-binding transcriptional activator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D ECO26_0537 ybbS; DNA-binding transcriptional activator of the allD operon, LYSR-type K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D ECO26_0375 cynR; DNA-binding transcriptional dual regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D ECO26_1839 cysB; DNA-binding transcriptional dual regulator CysB, O-acetyl-L-serine-binding K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D ECO26_1908 abgR; predicted DNA-binding transcriptional regulator AbgR K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D ECO26_2568 yeaT; predicted DNA-binding transcriptional regulator, LYSR-type K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D ECO26_2879 nac; DNA-binding transcriptional dual regulator Nac of nitrogen assimilation K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D ECO26_5523 yjiE; predicted DNA-binding transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D ECO26_4342 aaeR; predicted DNA-binding transcriptional regulator AaeR, efflux system K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D ECO26_4162 ygiP; predicted DNA-binding transcriptional regulator, LYSR-type K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D ECO26_4822 hdfR; DNA-binding transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D ECO26_1898 ycjZ; predicted DNA-binding transcriptional regulator, LYSR-type K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
C DeoR family
D ECO26_0967 deoR; DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D ECO26_4510 glpR; DNA-binding transcriptional repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D ECO26_2998 gatR; DNA-binding transcriptional repressor GatR of galactitol utilization K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D ECO26_4234 agaR; DNA-binding transcriptional dual regulator AgaR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D ECO26_3875 fucR; DNA-binding transcriptional activator FucR K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D ECO26_3770 srlR; DNA-binding transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D ECO26_5357 ulaR; DNA-binding transcriptional dual regulator UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D ECO26_4706 yihW; predicted DNA-binding transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D ECO26_0381 lacI; DNA-binding transcriptional repressor LacI K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D ECO26_3063 galS; DNA-binding transcriptional repressor GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECO26_3910 galR; DNA-binding transcriptional repressor GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECO26_4825 rbsR; DNA-binding transcriptional repressor RbsR of ribose metabolism K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECO26_5032 xylR; DNA-binding transcriptional activator XylR, xylose-binding K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECO26_4651 cytR; DNA-binding transcriptional dual regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D ECO26_0083 fruR; DNA-binding transcriptional dual regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D ECO26_5411 treR; DNA-binding transcriptional repressor TreR K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D ECO26_3777 ascG; DNA-binding transcriptional repressor AscG K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D ECO26_2388 purR; DNA-binding transcriptional repressor PurR, hypoxanthine-binding K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D ECO26_4527 gntR; DNA-binding transcriptional repressor GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D ECO26_4176 ebgR; DNA-binding transcriptional repressor EbgR K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D ECO26_2348 malI; DNA-binding transcriptional repressor MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D ECO26_2140 predicted DNA-binding transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D ECO26_4898 yidP; predicted DNA-binding transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D ECO26_5215 phnF; predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D ECO26_4463 frlR; predicted DNA-binding transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D ECO26_0790 mngA; transcriptional regulator of succinylCoA synthetase operon K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D ECO26_1700 fadR; DNA-binding transcriptional dual regulator FadR of fatty acid metabolism K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D ECO26_0115 pdhR; DNA-binding transcriptional dual regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D ECO26_4081 glcC; DNA-binding transcriptional dual regulator, glycolate-binding K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D ECO26_5520 uxuR; DNA-binding transcriptional repressor UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D ECO26_4201 exuR; DNA-binding transcriptional repressor ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D ECO26_4993 lldR; DNA-binding transcriptional repressor LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D ECO26_4887 dgoR; predicted DNA-binding transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D ECO26_4325 nanR; DNA-binding transcriptional dual regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D ECO26_2051 yncC; predicted DNA-binding transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D ECO26_3733 csiR; DNA-binding transcriptional dual regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D ECO26_2151 ydfH; predicted DNA-binding transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D ECO26_5564 yjjM; predicted DNA-binding transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D ECO26_0347 betI; DNA-binding transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D ECO26_0498 acrR; DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D ECO26_4959 ttk; division inhibitor Ttk K05501 slmA; TetR/AcrR family transcriptional regulator
D ECO26_1251 ycdC; predicted DNA-binding transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D ECO26_2378 ydhM; predicted DNA-binding transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D ECO26_2346 uidR; DNA-binding transcriptional repressor UidR K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D ECO26_4370 envR; DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D ECO26_5420 yjgJ; predicted transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D ECO26_1444 ycfQ; predicted DNA-binding transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D ECO26_5080 fabR; DNA-binding transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D ECO26_0922 ybiH; predicted DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D ECO26_0973 ybjK; predicted DNA-binding transcriptional regulator, DEOR-type K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D ECO26_4835 asnC; DNA-binding transcriptional dual regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D ECO26_1015 lrp; DNA-binding transcriptional dual regulator Lrp, leucine-binding K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ECO26_0482 ybaO; predicted DNA-binding transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D ECO26_2808 sdiA; DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D ECO26_0329 ecpR_matA; predicted regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D ECO26_2838 rcsA; DNA-binding transcriptional activator RcsA, co-regulator with RcsB K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D ECO26_1373 csgD; DNA-binding transcriptional activator CsgD in two-component regulatory system K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D ECO26_4597 yhiF; predicted DNA-binding transcriptional regulator K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D ECO26_5573 bglJ; DNA-binding transcriptional activator BglJ K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D ECO26_4506 malT; fused conserved protein: DNA-binding transcriptional activator/maltotriose-ATP-binding protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D ECO26_4602 gadE; DNA-binding transcriptional activator GadE K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D ECO26_2132 marR; DNA-binding transcriptional repressor MarR of multiple antibiotic resistance K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D ECO26_2371 slyA; DNA-binding transcriptional activator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D ECO26_3752 mprA; DNA-binding transcriptional repressor MprA of microcin B17 synthesis and multidrug efflux K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D ECO26_3809 transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
D ECO26_0522 cueR; DNA-binding transcriptional activator CueR of copper-responsive regulon genes K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D ECO26_4394 zntR; DNA-binding transcriptional activator ZntR in response to Zn(II) K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D ECO26_5180 soxR; DNA-binding transcriptional dual regulator SoxR, Fe-S center for redox-sensing K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D ECO26_1673 ycgE; predicted DNA-binding transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D ECO26_0747 fur; DNA-binding transcriptional dual regulator Fur of siderophore biosynthesis and transport K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ECO26_5162 zur; DNA-binding transcriptional repressor Zur, Zn(II)-binding K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D ECO26_5122 iclR; DNA-binding transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D ECO26_0382 mhpR; DNA-binding transcriptional activator MhpR, 3HPP-binding K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D ECO26_0539 allR; DNA-binding transcriptional repressor AllR K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D ECO26_2597 kdgR; predicted DNA-binding transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D ECO26_5027 yiaJ; predicted DNA-binding transcriptional repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D ECO26_4446 crp; DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D ECO26_1903 fnr; DNA-binding transcriptional dual regulator Fnr, global regulator of anaerobic growth K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D ECO26_3075 yeiL; DNA-binding transcriptional activator of stationary phase nitrogen survival K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D ECO26_3578 iscR; DNA-binding transcriptional repressor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D ECO26_5344 nsrR; predicted DNA-binding transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D ECO26_4589 arsR; DNA-binding transcriptional repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D ECO26_2033 ydcN; predicted DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D ECO26_0943 mntR; DNA-binding transcriptional regulator of mntH K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D ECO26_3479 yfeT; predicted DNA-binding transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D ECO26_2691 yebK; predicted DNA-binding transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D ECO26_5086 birA; bifunctional biotin-[acetylCoA carboxylase]holoenzyme synthetase/DNA-binding transcriptional repressor, bio-5'-AMP-binding K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ECO26_4367 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D ECO26_5599 trpR; DNA-binding transcriptional repressor TrpR, tryptophan-binding K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D ECO26_0368 prpR; DNA-binding transcriptional activator PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D ECO26_4292 sfsB; DNA-binding transcriptional activator SfsB of maltose metabolism K07724 ner; Ner family transcriptional regulator
D ECO26_0071 sgrR; DNA-binding transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D ECO26_5596 nadR; bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D ECO26_1866 puuR; DNA-binding transcriptional repressor PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D ECO26_2108 hipB; DNA-binding transcriptional regulator HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D ECO26_1779 putative phage repressor protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D ECO26_2203 predicted phage repressor CI K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D ECO26_2272 predicted phage repressor protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D ECO26_1175 predicted repressor protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D ECO26_1924 putative phage repressor protein CI K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D ECO26_3780 conserved predicted protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECO26_4184 ygjM; predicted DNA-binding transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECO26_1174 putative transcription regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECO26_1582 probable transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECO26_2704 probable transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D ECO26_4034 putative transcriptional regulator, NtrC family K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
D ECO26_3538 hyfR; DNA-binding transcriptional activator HyfR, formate sensing K12146 hyfR; hydrogenase-4 transcriptional activator
D ECO26_3772 norR; DNA-binding transcriptional activator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D ECO26_3796 fhlA; DNA-binding transcriptional activator FhlA K15836 fhlA; formate hydrogenlyase transcriptional activator
D ECO26_0165 cdaR; DNA-binding transcriptional activator CdaR K02647 cdaR; carbohydrate diacid regulator
D ECO26_0815 modE; DNA-binding transcriptional dual regulator ModE K02019 modE; molybdate transport system regulatory protein
D ECO26_2263 predicted DNA-binding protein K07726 K07726; putative transcriptional regulator
D ECO26_5046 yiaG; predicted transcriptional regulator K07726 K07726; putative transcriptional regulator
D ECO26_4699 conserved predicted protein K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D ECO26_4568 nikR; DNA-binding transcriptional repressor NikR, Ni-binding K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D ECO26_4646 metJ; DNA-binding transcriptional repressor MetJ, S-adenosylmethionine-binding K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D ECO26_1252 putA; fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D ECO26_2195 bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D ECO26_3888 predicted antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECO26_4859 bglG; transcriptional antiterminator of bgl operon K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECO26_4689 frvR; predicted regulator FrvR K18531 frvR; putative frv operon regulatory protein
C Others
D ECO26_0393 frmR; regulator protein that represses frmRAB operon K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D ECO26_3014 yohL; conserved predicted protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D ECO26_0470 bolA; regulator of penicillin binding proteins and beta-lactamase transcription K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D ECO26_p2-27 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ECO26_4745 rfaH; DNA-binding transcriptional antiterminator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D ECO26_4336 argR; DNA-binding transcriptional dual regulator ArgR, L-arginine-binding K03402 argR; transcriptional regulator of arginine metabolism
D ECO26_0740 nagC; DNA-binding transcriptional dual regulator NagC K02565 nagC; N-acetylglucosamine repressor
D ECO26_2297 dgsA; NAGC-like DNA-binding transcriptional repressor DgsA K15545 mlc; transcriptional regulator of PTS gene
D ECO26_4999 mtlR; DNA-binding repressor MtlR K02562 mtlR; mannitol operon repressor
D ECO26_1891 tyrR; DNA-binding transcriptional dual regulator TyrR, tyrosine-binding K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D ECO26_5245 cadC; DNA-binding transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D ECO26_3925 ygeH; predicted transcriptional regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D ECO26_3525 gcvR; DNA-binding transcriptional repressor GcvR, regulatory protein accessory to GcvA K03567 gcvR; glycine cleavage system transcriptional repressor
D ECO26_2003 paaX; transcriptional repressor for phenylacetic acid degradation K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D ECO26_1870 pspF; DNA-binding transcriptional activator PspF K03974 pspF; psp operon transcriptional activator
D ECO26_1873 pspC; DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D ECO26_2114 lsrR; predicted DNA-binding transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor
D ECO26_1714 dhaR; PTS-dependent dihydroxyacetone kinase operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon
D ECO26_0685 rnk; nucleoside diphosphate kinase regulator RnK K06140 rnk; regulator of nucleoside diphosphate kinase
D ECO26_1647 putative DNA binding protein K07733 alpA; prophage regulatory protein
D ECO26_1262 putative regulatory protein K07733 alpA; prophage regulatory protein
D ECO26_5444 putative DNA binding protein K07733 alpA; prophage regulatory protein
D ECO26_3104 hypothetical protein K07733 alpA; prophage regulatory protein
D ECO26_4934 putative DNA binding transcriptional regulator K07733 alpA; prophage regulatory protein
D ECO26_2327 hypothetical protein K07733 alpA; prophage regulatory protein
D ECO26_2893 conserved predicted protein K07733 alpA; prophage regulatory protein
D ECO26_5478 predicted transcriptional regulator K07733 alpA; prophage regulatory protein
D ECO26_4047 yqgE; conserved predicted protein K07735 algH; putative transcriptional regulator
D ECO26_0035 caiF; DNA-binding transcriptional activator CaiF K08277 caiF; transcriptional activator CaiF
D ECO26_0148 dksA; DNA-binding transcriptional regulator DskA of rRNA transcription, DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D ECO26_0445 ybaD; conserved predicted protein K07738 nrdR; transcriptional repressor NrdR
D ECO26_0296 crl; DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D ECO26_4509 rtcR; sigma 54-dependent transcriptional regulator of rtcBA expression K14414 rtcR; transcriptional regulatory protein RtcR
D ECO26_1780 putative antirepressor K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D ECO26_3203 putative antirepressor protein Cro K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D ECO26_2202 probable antirepressor protein Cro K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D ECO26_2271 predicted antirepressor protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D ECO26_1465 putative antirepressor Cro K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D ECO26_0084 mraZ; conserved predicted protein K03925 mraZ; transcriptional regulator MraZ
D ECO26_4124 ygiV; predicted transcriptional regulator K07471 ygiV; probable transcriptional regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0