+E Transcription factors KO
#
Transcription Factors - Escherichia coli O55:H7 CB9615 (EPEC)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D G2583_2412 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D G2583_0067 araC; arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D G2583_4711 rhaR; positive regulator for rhaRS operon K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D G2583_4710 rhaS; positive regulator for rhaBAD operon K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D G2583_2181 chbR; ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D G2583_4942 adiY; putative ARAC-type regulatory protein K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D G2583_2968 eutR; AraC-type DNA-binding domain-containing proteins K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D G2583_0720 envY; envelope protein; thermoregulation of porin biosynthesis K11920 envY; AraC family transcriptional regulator
D G2583_4887 soxS; DNA-binding transcriptional dual regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D G2583_1896 marA; Multiple antibiotic resistance protein marA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D G2583_5255 rob; Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D G2583_0404 ykgD; Hypothetical transcriptional regulator ykgD K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D G2583_4250 gadW; putative ARAC-type regulatory protein K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D G2583_4252 gadX; DNA-binding transcriptional dual regulator K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D G2583_4944 melR; Melibiose operon regulatory protein K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D G2583_2237 yeaM; Putative AraC-type regulatory protein K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D G2583_2754 ada; O6-methylguanine-DNA methyltransferase; transcription activator/repressor K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D G2583_1901 ftrA; Transcriptional activator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D G2583_3461 gcvA; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D G2583_4567 ilvY; DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D G2583_4628 metR; regulator for metE and metH K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D G2583_0018 nhaR; DNA-binding transcriptional activator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D G2583_4774 oxyR; Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D G2583_3570 argP; Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D G2583_0080 leuO; leucine transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D G2583_3067 hcaR; Hca operon transcriptional activator K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D G2583_3840 tdcA; DNA-binding transcriptional activator K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D G2583_0624 allS; DNA-binding transcriptional activator of the allD operon K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D G2583_0449 cynR; DNA-binding transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D G2583_1614 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D G2583_2497 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D G2583_1687 abgR; putative DNA-binding transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D G2583_2246 yeaT; putative transcriptional regulator LYSR-type K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D G2583_2498 nac; Nitrogen assimilation regulatory protein Nac K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D G2583_5129 yjiE; transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D G2583_3963 aaeR; putative DNA-binding transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D G2583_3784 ttdR; transcriptional activator TtdR K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D G2583_4558 hdfR; transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D G2583_1677 ycjZ; putative transcriptional regulator LYSR-type K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
C DeoR family
D G2583_1070 deoR; Deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D G2583_4122 glpR; Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D G2583_2622 gatR; Galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D G2583_3853 agaR; Putative aga operon transcriptional repressor K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D G2583_3458 fucR; L-fucose operon activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D G2583_3355 srlR; Glucitol operon repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D G2583_5018 ulaR; putative DEOR-type transcriptional regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D G2583_4685 yihW; Putative DEOR-type transcriptional activator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D G2583_0456 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D G2583_4549 rbsR; Regulator for rbs operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G2583_3494 galR; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G2583_4311 xylR; Xylose operon regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G2583_2694 galS; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G2583_4741 cytR; Transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D G2583_0084 fruR; Fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D G2583_2619 hypothetical protein K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D G2583_5070 treR; Trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D G2583_3362 ascG; transcriptional regulator AscG K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D G2583_2053 purR; DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D G2583_4140 gntR; regulator of gluconate operon K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D G2583_3799 ebgR; DNA-binding transcriptional repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D G2583_2014 malI; Maltose regulon regulatory protein MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D G2583_4478 yidP; transcriptional regulator, GntR family K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D G2583_4929 phnF; Phosphonates metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D G2583_4080 frlR; GntR-family transcriptional regulator FrlR K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D G2583_1448 fadR; Fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D G2583_0117 pdhR; transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D G2583_3699 glcC; Glc operon transcriptional activator K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D G2583_5125 uxuR; DNA-binding transcriptional repressor K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D G2583_3818 exuR; Exu regulon transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D G2583_4343 lldR; Putative L-lactate dehydrogenase operon regulatory protein K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D G2583_3946 nanR; Transcriptional regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D G2583_3319 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D G2583_1811 yncC; putative DNA-binding transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D G2583_3310 csiR; DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D G2583_1907 ydfH; Hypothetical transcriptional regulator ydfH K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D G2583_5159 yjjM; transcriptional regulator, GntR family K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D G2583_0417 betI; Transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D G2583_0576 acrR; DNA-binding transcriptional repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D G2583_4377 slmA; HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator
D G2583_1246 rutR; putative tet operon regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D G2583_2044 ydhM; hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D G2583_2012 uidR; repressor for uid operon K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D G2583_3983 envR; Probable acrEF/envCD operon repressor K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D G2583_5081 yjgJ; hypothetical protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D G2583_1371 ycfQ; hypothetical protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D G2583_4778 fabR; Transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D G2583_1024 ybiH; Hypothetical transcriptional regulator ybiH K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D G2583_1076 ybjK; putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D G2583_4539 asnC; DNA-binding transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D G2583_1126 lrp; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D G2583_0559 ybaO; Putative transcriptional regulator YbaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D G2583_2367 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D G2583_0386 matA; MatA K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D G2583_2402 rcsA; Colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D G2583_1298 csgD; CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D G2583_4233 dctR; hypothetical protein K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D G2583_5168 bglJ; transcriptional regulator, LuxR family K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D G2583_4115 malT; transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D G2583_4247 gadE; hypothetical protein K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D G2583_1895 marR; MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D G2583_2037 slyA; Transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D G2583_3331 mprA; transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D G2583_3388 putative regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
D G2583_0604 cueR; DNA-binding transcriptional activator of copper-responsive regulon genes K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D G2583_4010 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D G2583_4888 soxR; Redox-sensitive transcriptional activator soxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D G2583_2664 mlrA; DNA-binding transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D G2583_1415 ycgE; transcriptional regulator mlrA K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D G2583_0844 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D G2583_4871 zur; Putative zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D G2583_4835 iclR; Repressor of aceBA operon K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D G2583_0459 mhpR; DNA-binding protein transcriptional activator, 3HPP-binding protein K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D G2583_0626 allR; Putative regulator K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D G2583_2277 kdgR; putative regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D G2583_4063 crp; Catabolite gene activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D G2583_1682 fnr; Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D G2583_2706 yeiL; DNA-binding transcriptional activator of stationary phase nitrogen survival K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D G2583_3061 iscR; DNA-binding transcriptional repressor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D G2583_5005 nsrR; transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D G2583_4227 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D G2583_1795 ydcN; DNA-binding protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D G2583_1045 mntR; manganese transport regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D G2583_2958 yfeT; hypothetical protein K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D G2583_2305 yebK; DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D G2583_4788 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D G2583_3980 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D G2583_5252 trpR; Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D G2583_0441 prpR; Propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D G2583_3913 sfsB; Sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator
D G2583_0073 sgrR; putative transport protein K11925 sgrR; SgrR family transcriptional regulator
D G2583_5249 nadR; bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D G2583_1646 puuR; DNA-binding transcriptional repressor K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D G2583_1873 hipB; transcriptional regulator HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D G2583_2476 dicA; DicA-like protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D G2583_1540 dicA; DicA-like protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D G2583_0298 gene 40 protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D G2583_3806 ygjM; Helix-turn-helix DNA-binding domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D G2583_3014 hyfR; Hydrogenase-4 transcriptional regulator K12146 hyfR; hydrogenase-4 transcriptional activator
D G2583_3357 norR; Anaerobic nitric oxide reductase transcription regulator norR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D G2583_3380 fhlA; Formate hydrogenlyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D G2583_0166 cdaR; hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D G2583_0927 modE; transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D G2583_4297 yiaG; putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D G2583_4453 Putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D G2583_0955 hypothetical protein K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D G2583_4202 nikR; Nickel-responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D G2583_4750 metJ; MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D G2583_1247 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
D G2583_4701 frvR; Putative PTS system, IIA component K18531 frvR; putative frv operon regulatory protein
C Others
D G2583_0470 frmR; regulator protein FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D G2583_2641 rcnR; hypothetical protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D G2583_0547 bolA; transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D G2583_pO550150 partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D G2583_4640 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D G2583_3957 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D G2583_0837 nagC; N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor
D G2583_1988 dgsA; putative NAGC-like transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D G2583_4337 mtlR; Mannitol operon repressor K02562 mtlR; mannitol operon repressor
D G2583_1670 tyrR; DNA-binding protein transcriptional dual regulator, tyrosine-binding protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D G2583_4960 cadC; Transcriptional activator cadC K03765 cadC; transcriptional activator of cad operon
D G2583_3002 gcvR; Glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D G2583_1650 pspF; Psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D G2583_1653 pspC; Phage shock protein C K03973 pspC; phage shock protein C
D G2583_1877 lsrR; putative transcriptional regulator, sorC family K11531 lsrR; lsr operon transcriptional repressor
D G2583_1471 dhaR; PTS-dependent dihydroxyacetone kinase operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon
D G2583_0774 rnk; Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D G2583_3297 alpA; Putative DNA binding protein K07733 alpA; prophage regulatory protein
D G2583_0362 alpA; Phage DNA binding protein K07733 alpA; prophage regulatory protein
D G2583_1388 putative DNA binding protein K07733 alpA; prophage regulatory protein
D G2583_3654 Predicted transcriptional regulator K07733 alpA; prophage regulatory protein
D G2583_3607 yqgE; UPF0301 protein yqgE K07735 algH; putative transcriptional regulator
D G2583_0036 caiF; DNA-binding transcriptional activator CaiF K08277 caiF; transcriptional activator CaiF
D G2583_0149 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D G2583_0524 nrdR; ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D G2583_0276 crl; Sigma factor-binding protein crl K11926 crl; sigma factor-binding protein Crl
D G2583_4121 rtcR; Sigma-54 dependent transcriptional regulator RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D G2583_3258 cro; Cro K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D G2583_1964 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D G2583_1541 dicC; DNA-binding transcriptional regulator DicC K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D G2583_2475 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D G2583_0085 mraZ; hypothetical protein K03925 mraZ; transcriptional regulator MraZ
D G2583_3744 ygiV; hypothetical protein K07471 ygiV; probable transcriptional regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0