+D GENES KO
#
KEGG Orthology (KO) - Agathobacter rectalis M104/1
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:era00010]
D ERE_11290 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ERE_04380 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_06040 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_05110 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_16260 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_21800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_22870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ERE_15610 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ERE_15630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ERE_15620 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ERE_23550 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D ERE_15600 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ERE_09730 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ERE_13640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ERE_28690 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D ERE_16120 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ERE_06110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ERE_25980 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D ERE_08670 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ERE_31990 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D ERE_29990 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D ERE_16560 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:era00020]
D ERE_00480 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D ERE_19050 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D ERE_32270 Isopropylmalate/homocitrate/citramalate synthases K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D ERE_32290 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D ERE_29700 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D ERE_29690 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D ERE_31990 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D ERE_16120 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:era00030]
D ERE_04380 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ERE_06170 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ERE_05150 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_05160 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_07230 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_07240 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_07250 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D ERE_16490 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ERE_04870 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D ERE_04900 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D ERE_08670 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ERE_25070 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D ERE_09610 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D ERE_22870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ERE_16260 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_21800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_06040 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_05110 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:era00040]
D ERE_09600 D-glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D ERE_09640 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D ERE_09630 Mannitol-1-phosphate/altronate dehydrogenases K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D ERE_23150 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D ERE_06170 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ERE_08290 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D ERE_17310 Threonine dehydrogenase and related Zn-dependent dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:era00051]
D ERE_04660 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_03900 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_17280 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_06040 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_05110 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_16260 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_21800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_01760 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D ERE_17310 Threonine dehydrogenase and related Zn-dependent dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D ERE_22870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ERE_15610 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ERE_16490 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ERE_01770 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:era00052]
D ERE_25980 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D ERE_17820 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D ERE_17810 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D ERE_29600 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D ERE_08670 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ERE_11290 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ERE_31690 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_31700 Beta galactosidase small chain. K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_17840 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_00680 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_31830 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_07190 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D ERE_18420 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D ERE_08990 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ERE_24710 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_06040 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_05110 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_04650 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D ERE_03890 Beta-fructosidases (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D ERE_24570 Alpha-glucosidases, family 31 of glycosyl hydrolases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D ERE_22040 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
D ERE_23150 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:era00500]
D ERE_04650 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D ERE_03890 Beta-fructosidases (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D ERE_24570 Alpha-glucosidases, family 31 of glycosyl hydrolases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D ERE_24700 maltooligosyl trehalose synthase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D ERE_09520 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ERE_20710 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ERE_23730 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D ERE_20490 cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D ERE_09480 hypothetical protein K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D ERE_29980 Phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D ERE_29960 Phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D ERE_29970 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D ERE_29990 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D ERE_31000 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ERE_31010 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ERE_25020 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ERE_25030 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ERE_32370 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D ERE_31440 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D ERE_01850 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D ERE_06940 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D ERE_20620 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D ERE_28440 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D ERE_24130 Glycosidases K01176 AMY; alpha-amylase [EC:3.2.1.1]
D ERE_20420 Glycosidases K01176 AMY; alpha-amylase [EC:3.2.1.1]
D ERE_28930 Glycosidases K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D ERE_14300 Glycosidases K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D ERE_20990 Glycosidases K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D ERE_22040 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D ERE_28420 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D ERE_11570 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D ERE_28220 Type II secretory pathway, pullulanase PulA and related glycosidases K01214 ISA; isoamylase [EC:3.2.1.68]
D ERE_08670 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ERE_11290 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ERE_04380 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ERE_04660 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_03900 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_17280 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:era00520]
D ERE_09080 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D ERE_09490 chitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D ERE_10620 PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2) K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D ERE_10640 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D ERE_10650 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D ERE_04660 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_03900 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_17280 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ERE_22520 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ERE_09060 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D ERE_31610 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D ERE_08640 UDP-glucose pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D ERE_24940 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ERE_22910 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ERE_07200 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D ERE_20730 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D ERE_16560 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D ERE_11290 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ERE_08670 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ERE_17820 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D ERE_17810 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D ERE_29600 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D ERE_08990 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ERE_04380 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ERE_31000 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ERE_31010 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ERE_25020 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ERE_25030 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:era00620]
D ERE_16120 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ERE_24870 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D ERE_15910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ERE_16410 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ERE_13640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ERE_04070 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D ERE_06110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ERE_17300 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D ERE_11270 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D ERE_16020 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D ERE_26940 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D ERE_29700 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D ERE_29690 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D ERE_31990 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D ERE_28690 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_06120 Isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:era00630]
D ERE_00480 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D ERE_19050 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_20170 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D ERE_25950 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D ERE_30400 Predicted phosphatases K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D ERE_22860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_08120 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_10160 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_20250 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_24330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ERE_20340 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D ERE_12830 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D ERE_12820 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D ERE_09610 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:era00640]
D ERE_15910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ERE_16410 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ERE_24870 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D ERE_22560 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ERE_06110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ERE_27410 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D ERE_20340 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:era00650]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_22570 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ERE_20960 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D ERE_22560 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ERE_26960 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ERE_26970 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D ERE_24870 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D ERE_16120 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ERE_18510 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_28880 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_05910 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain./Thiamine pyrophosphate enzyme, central domain. K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_18500 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ERE_32000 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:era00660]
D ERE_18510 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_28880 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_05910 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain./Thiamine pyrophosphate enzyme, central domain. K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_18500 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ERE_32000 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ERE_32050 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D ERE_32060 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D ERE_28900 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D ERE_15610 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:era00190]
D ERE_03030 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D ERE_03060 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ERE_10330 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ERE_03040 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ERE_10340 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ERE_10360 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D ERE_03070 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ERE_10320 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ERE_10390 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D ERE_10370 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D ERE_03000 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ERE_10380 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ERE_16100 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:era00710]
D ERE_15620 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ERE_15630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ERE_22870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ERE_16260 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_21800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_05150 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_05160 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_07230 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_07240 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_16490 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ERE_15610 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ERE_06170 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ERE_07250 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D ERE_31990 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D ERE_28690 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:era00720]
D ERE_16120 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ERE_28690 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D ERE_29700 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D ERE_29690 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_32290 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D ERE_32390 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D ERE_32400 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D ERE_31150 5,10-methylenetetrahydrofolate reductase, prokaryotic form K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D ERE_16410 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ERE_15910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:era00680]
D ERE_10160 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_20250 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_09730 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ERE_22870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ERE_16260 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_21800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_06040 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_05110 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ERE_15910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ERE_16410 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ERE_23550 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D ERE_15600 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ERE_28860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ERE_18860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ERE_11640 phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:era00910]
D ERE_14540 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D ERE_23060 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D ERE_13290 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D ERE_22860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_08120 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_30430 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D ERE_28310 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ERE_30440 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ERE_08620 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:era00920]
D ERE_07540 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D ERE_07530 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D ERE_07520 sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D ERE_07510 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D ERE_07470 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D ERE_07480 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ERE_29530 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D ERE_07500 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D ERE_07490 hypothetical protein K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D ERE_22000 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits K00385 asrC; anaerobic sulfite reductase subunit C
D ERE_21870 Rhodanese-related sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D ERE_05640 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ERE_11130 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ERE_05020 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ERE_07550 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ERE_30990 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:era00061]
D ERE_13380 acyl carrier protein K02078 acpP; acyl carrier protein
D ERE_20880 Acyl carrier protein K02078 acpP; acyl carrier protein
D ERE_15860 acyl carrier protein K02078 acpP; acyl carrier protein
D ERE_13360 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ERE_13310 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D ERE_13340 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ERE_13350 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ERE_11560 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ERE_13330 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ERE_13370 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D ERE_20870 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:era00071]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_22560 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ERE_20870 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:era00561]
D ERE_24330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ERE_08550 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D ERE_15870 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D ERE_30300 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ERE_31930 Predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ERE_26250 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ERE_24120 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ERE_23200 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ERE_24710 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:era00564]
D ERE_30310 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D ERE_08540 Predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D ERE_30300 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ERE_31930 Predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ERE_26250 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ERE_24120 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ERE_23200 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ERE_09330 Lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D ERE_25460 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D ERE_27700 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D ERE_08370 Phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D ERE_08360 Phosphatidylserine decarboxylase. K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D ERE_26520 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D ERE_04060 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D ERE_29460 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D ERE_14290 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D ERE_00500 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D ERE_00540 Phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D ERE_07100 Glycerol dehydrogenase and related enzymes K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:era00600]
D ERE_31690 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_31700 Beta galactosidase small chain. K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_17840 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_00680 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_31830 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_24710 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:era00230]
D ERE_30940 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D ERE_04900 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D ERE_08670 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ERE_25070 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D ERE_20180 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D ERE_20190 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D ERE_15670 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D ERE_20200 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D ERE_07280 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D ERE_15590 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D ERE_15570 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D ERE_05550 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ERE_07080 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D ERE_04910 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D ERE_30250 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D ERE_24220 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D ERE_08140 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ERE_21830 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D ERE_27650 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D ERE_23700 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D ERE_26550 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D ERE_16430 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D ERE_14120 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D ERE_06730 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ERE_35610 Oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ERE_06390 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D ERE_08330 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D ERE_20560 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D ERE_21330 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D ERE_20380 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D ERE_30490 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D ERE_04890 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D ERE_25160 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D ERE_07470 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D ERE_07480 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ERE_08620 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:era00240]
D ERE_22590 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D ERE_22600 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D ERE_06280 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D ERE_06270 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D ERE_10500 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D ERE_07570 dihydroorotate dehydrogenase (subfamily 1) family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D ERE_07580 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D ERE_30330 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D ERE_07310 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D ERE_07590 orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D ERE_27730 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D ERE_14250 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D ERE_22960 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D ERE_26900 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D ERE_27330 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D ERE_06350 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D ERE_04860 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D ERE_02950 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D ERE_04880 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D ERE_06730 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ERE_35610 Oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ERE_02960 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D ERE_30320 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D ERE_18530 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D ERE_35690 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:era00250]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_20820 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D ERE_18090 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D ERE_03620 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D ERE_03460 Predicted amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D ERE_18030 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D ERE_27170 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ERE_31560 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ERE_20380 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D ERE_30490 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D ERE_15570 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D ERE_06280 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D ERE_06270 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D ERE_30430 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D ERE_28310 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ERE_30440 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ERE_13290 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D ERE_22860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_08120 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_22590 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D ERE_22600 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D ERE_22520 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:era00260]
D ERE_09300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ERE_31570 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ERE_22670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ERE_11640 phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D ERE_32080 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D ERE_06410 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D ERE_10160 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_20250 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_24330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ERE_23550 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D ERE_15600 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ERE_28860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ERE_18860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ERE_08370 Phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D ERE_15820 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D ERE_11680 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D ERE_11690 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:era00270]
D ERE_05640 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ERE_11130 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ERE_05020 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ERE_07550 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ERE_06090 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ERE_16450 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D ERE_24920 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D ERE_14660 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D ERE_08590 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D ERE_30250 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D ERE_19990 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_35870 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_08600 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D ERE_09300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ERE_31570 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ERE_22670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ERE_30990 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D ERE_16420 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D ERE_21890 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D ERE_22010 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D ERE_06540 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_06110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ERE_28860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ERE_18860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:era00280]
D ERE_06540 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ERE_22560 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:era00290]
D ERE_15820 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D ERE_32050 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D ERE_32060 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D ERE_28900 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D ERE_18510 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_28880 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_05910 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain./Thiamine pyrophosphate enzyme, central domain. K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_18500 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ERE_32000 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ERE_32010 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ERE_28890 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ERE_06540 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ERE_18030 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D ERE_06120 Isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:era00300]
D ERE_22670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ERE_09300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ERE_31570 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ERE_18870 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ERE_16060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ERE_08060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ERE_08050 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D ERE_02770 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D ERE_27130 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D ERE_16080 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D ERE_08100 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D ERE_16290 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D ERE_16070 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ERE_11320 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:era00220]
D ERE_02140 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D ERE_27170 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ERE_31560 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ERE_22860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_08120 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_22590 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D ERE_22600 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D ERE_08620 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D ERE_13290 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_18030 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D ERE_19040 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D ERE_27150 N-acetylglutamate synthase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D ERE_27140 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D ERE_27160 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D ERE_02770 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D ERE_27130 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:era00330]
D ERE_14130 Arginine/lysine/ornithine decarboxylases K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D ERE_14670 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D ERE_14630 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D ERE_14620 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D ERE_14660 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D ERE_14640 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D ERE_19020 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D ERE_26780 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D ERE_26750 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:era00340]
D ERE_26420 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D ERE_26430 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D ERE_08130 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D ERE_16180 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D ERE_16170 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D ERE_26400 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D ERE_17790 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ERE_09340 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D ERE_15640 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D ERE_26410 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:era00350]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_17790 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:era00360]
D ERE_22570 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_17790 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ERE_05890 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D ERE_18390 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:era00400]
D ERE_30950 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D ERE_15930 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D ERE_09900 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D ERE_24950 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D ERE_09850 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D ERE_32180 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D ERE_28940 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D ERE_11730 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D ERE_11720 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D ERE_11710 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D ERE_04710 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D ERE_11700 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D ERE_11680 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D ERE_11690 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D ERE_32430 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D ERE_22680 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D ERE_32190 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_17790 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:era00410]
D ERE_07720 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D ERE_07730 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D ERE_22560 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:era00430]
D ERE_16410 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ERE_15910 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:era00450]
D ERE_06090 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ERE_16450 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D ERE_20390 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D ERE_22020 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D ERE_13440 xanthine dehydrogenase, molybdenum binding subunit apoprotein K12528 xdhD; putative selenate reductase molybdopterin-binding subunit
D ERE_13460 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs K12529 ygfM; putative selenate reductase FAD-binding subunit
D ERE_07470 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D ERE_07480 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ERE_13490 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
C 00460 Cyanoamino acid metabolism [PATH:era00460]
D ERE_09520 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ERE_20710 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ERE_18090 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D ERE_10160 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_20250 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:era00470]
D ERE_32330 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ERE_11330 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ERE_23020 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ERE_30650 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ERE_33190 hypothetical protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D ERE_16080 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D ERE_16290 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:era00480]
D ERE_22060 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D ERE_32290 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D ERE_14660 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:era00511]
D ERE_31690 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_31700 Beta galactosidase small chain. K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_17840 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_00680 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ERE_31830 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
D ERE_05920 conserved hypothetical protein/3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:era00541]
D ERE_29600 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D ERE_08990 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ERE_08970 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ERE_08960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D ERE_08940 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D ERE_08950 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D ERE_31610 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:era00550]
D ERE_24940 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ERE_22910 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ERE_25040 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D ERE_30650 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ERE_16070 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ERE_11330 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ERE_11320 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D ERE_27710 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D ERE_28510 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ERE_05600 PAP2 superfamily. K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ERE_18400 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ERE_02110 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D ERE_22840 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ERE_13410 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D ERE_30640 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ERE_26660 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D ERE_12480 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_27400 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_14170 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_26990 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:era00552]
D ERE_28510 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ERE_05600 PAP2 superfamily. K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ERE_07800 conserved hypothetical protein TIGR02918 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D ERE_08650 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D ERE_09090 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D ERE_08930 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D ERE_07940 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:era00543]
D ERE_11090 Uncharacterized conserved protein K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ
D ERE_11890 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D ERE_05640 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ERE_11130 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:era00730]
D ERE_08010 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D ERE_08020 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D ERE_04980 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_29160 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_29150 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ERE_04340 tyrosine lyase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D ERE_04430 iron-only hydrogenase maturation protein HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D ERE_31070 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D ERE_04350 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D ERE_08030 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D ERE_06180 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D ERE_06160 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D ERE_25160 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:era00740]
D ERE_13210 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D ERE_13230 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D ERE_13200 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D ERE_13220 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D ERE_29510 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D ERE_30940 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:era00750]
D ERE_05070 Pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D ERE_32080 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D ERE_11430 pyridoxal phosphate synthase yaaD subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D ERE_11440 pyridoxal phosphate synthase yaaE subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:era00760]
D ERE_20820 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D ERE_20830 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D ERE_20810 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D ERE_15660 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D ERE_04910 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D ERE_26300 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D ERE_04960 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D ERE_32650 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D ERE_06770 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D ERE_14040 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D ERE_33950 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D ERE_31090 Predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:era00770]
D ERE_18510 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_28880 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_05910 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain./Thiamine pyrophosphate enzyme, central domain. K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ERE_18500 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ERE_32000 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ERE_32010 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ERE_28890 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ERE_07740 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D ERE_07730 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D ERE_02170 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D ERE_22490 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D ERE_26500 pantetheine-phosphate adenylyltransferase, bacterial K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D ERE_05490 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D ERE_09790 Phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D ERE_06540 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ERE_07720 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:era00780]
D ERE_13340 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ERE_13350 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ERE_11560 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ERE_13330 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ERE_04420 iron-only hydrogenase maturation protein HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D ERE_21810 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D ERE_02150 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:era00790]
D ERE_18520 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D ERE_06580 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D ERE_13210 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D ERE_13550 Molybdenum cofactor biosynthesis enzyme K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D ERE_13580 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D ERE_13570 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D ERE_13430 Uncharacterized MobA-related protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:era00670]
D ERE_18520 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D ERE_32390 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D ERE_32400 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D ERE_10160 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_20250 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ERE_20190 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D ERE_05550 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ERE_06240 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D ERE_16450 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D ERE_18530 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D ERE_35690 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D ERE_31150 5,10-methylenetetrahydrofolate reductase, prokaryotic form K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D ERE_26760 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:era00860]
D ERE_28250 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ERE_21920 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D ERE_21910 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D ERE_21930 siroheme synthase, N-terminal domain K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D ERE_29450 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D ERE_20120 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D ERE_29280 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D ERE_29300 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D ERE_29290 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D ERE_29310 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D ERE_29260 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D ERE_08070 ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D ERE_29400 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D ERE_29340 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D ERE_29380 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D ERE_29360 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D ERE_29370 Cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D ERE_29390 NaMN:DMB phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D ERE_29350 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D ERE_28300 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D ERE_29330 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:era00900]
D ERE_31070 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D ERE_27690 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D ERE_22360 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D ERE_21200 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D ERE_16400 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D ERE_27670 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D ERE_26890 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_31060 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D ERE_27710 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:era00903]
D ERE_06890 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D ERE_05150 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_05160 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_07230 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ERE_07240 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:era00523]
D ERE_08970 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ERE_08960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D ERE_08940 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D ERE_08950 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D ERE_19940 thiazolinyl imide reductase K12241 pchG; pyochelin biosynthesis protein PchG
C 01055 Biosynthesis of vancomycin group antibiotics
D ERE_08960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:era00946]
D ERE_09520 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ERE_20710 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D ERE_09840 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:era00332]
D ERE_26780 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D ERE_26750 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:era00261]
D ERE_07470 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D ERE_07480 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ERE_09300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ERE_31570 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ERE_18870 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ERE_16060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ERE_08060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ERE_08050 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:era00521]
D ERE_11290 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ERE_08670 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ERE_08970 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ERE_08960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D ERE_08940 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D ERE_08950 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D ERE_11290 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:era00525]
D ERE_08970 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ERE_08960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:era00401]
D ERE_32190 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_17790 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D ERE_11730 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D ERE_11720 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D ERE_13360 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ERE_13350 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ERE_11560 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D ERE_13380 acyl carrier protein K02078 acpP; acyl carrier protein
D ERE_20880 Acyl carrier protein K02078 acpP; acyl carrier protein
D ERE_15860 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:era00999]
D ERE_24920 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D ERE_09520 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ERE_20710 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:era00362]
D ERE_05890 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D ERE_18390 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D ERE_26960 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ERE_26970 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D ERE_22570 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D ERE_04070 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D ERE_05890 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D ERE_18390 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D ERE_06890 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D ERE_05890 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D ERE_18390 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:era03020]
D ERE_25690 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ERE_25680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ERE_26540 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D ERE_15690 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:era03010]
D ERE_27770 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D ERE_25310 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D ERE_25100 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D ERE_25200 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D ERE_14020 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D ERE_25230 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D ERE_25380 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D ERE_25110 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D ERE_25670 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D ERE_25120 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D ERE_25240 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D ERE_29490 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D ERE_15790 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D ERE_14000 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D ERE_25330 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D ERE_28350 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D ERE_25720 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D ERE_25340 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D ERE_25370 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D ERE_25360 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D ERE_25220 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D ERE_25700 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D ERE_13960 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D ERE_25730 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D ERE_11880 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D ERE_25270 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D ERE_25180 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D ERE_25300 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D ERE_25080 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D ERE_25210 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D ERE_15750 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D ERE_29620 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D ERE_26350 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D ERE_25320 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D ERE_25350 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D ERE_25260 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D ERE_26330 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D ERE_26610 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D ERE_25290 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D ERE_25190 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D ERE_16000 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D ERE_15890 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D ERE_29770 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D ERE_29630 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D ERE_R_37130 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ERE_R_37120 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:era00970]
D ERE_T_36740 ERE_T_36740 K14219 tRNA-Arg; tRNA Arg
D ERE_T_37010 ERE_T_37010 K14219 tRNA-Arg; tRNA Arg
D ERE_T_36720 ERE_T_36720 K14219 tRNA-Arg; tRNA Arg
D ERE_T_36610 ERE_T_36610 K14220 tRNA-Asn; tRNA Asn
D ERE_T_36880 ERE_T_36880 K14221 tRNA-Asp; tRNA Asp
D ERE_T_36620 ERE_T_36620 K14222 tRNA-Cys; tRNA Cys
D ERE_T_36790 ERE_T_36790 K14222 tRNA-Cys; tRNA Cys
D ERE_T_36970 ERE_T_36970 K14223 tRNA-Gln; tRNA Gln
D ERE_T_37030 ERE_T_37030 K14223 tRNA-Gln; tRNA Gln
D ERE_T_36600 ERE_T_36600 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36960 ERE_T_36960 K14224 tRNA-Glu; tRNA Glu
D ERE_T_37080 ERE_T_37080 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36710 ERE_T_36710 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36840 ERE_T_36840 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36700 ERE_T_36700 K14225 tRNA-Gly; tRNA Gly
D ERE_T_37000 ERE_T_37000 K14225 tRNA-Gly; tRNA Gly
D ERE_T_36660 ERE_T_36660 K14225 tRNA-Gly; tRNA Gly
D ERE_T_36670 ERE_T_36670 K14225 tRNA-Gly; tRNA Gly
D ERE_T_37020 ERE_T_37020 K14226 tRNA-His; tRNA His
D ERE_T_36680 ERE_T_36680 K14227 tRNA-Ile; tRNA Ile
D ERE_T_36630 ERE_T_36630 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37090 ERE_T_37090 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37100 ERE_T_37100 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37050 ERE_T_37050 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37110 ERE_T_37110 K14228 tRNA-Leu; tRNA Leu
D ERE_T_36650 ERE_T_36650 K14229 tRNA-Lys; tRNA Lys
D ERE_T_37060 ERE_T_37060 K14229 tRNA-Lys; tRNA Lys
D ERE_T_36940 ERE_T_36940 K14229 tRNA-Lys; tRNA Lys
D ERE_T_37040 ERE_T_37040 K14229 tRNA-Lys; tRNA Lys
D ERE_T_36750 ERE_T_36750 K14229 tRNA-Lys; tRNA Lys
D ERE_T_36920 ERE_T_36920 K14230 tRNA-Met; tRNA Met
D ERE_T_36850 ERE_T_36850 K14230 tRNA-Met; tRNA Met
D ERE_T_36690 ERE_T_36690 K14231 tRNA-Phe; tRNA Phe
D ERE_T_36930 ERE_T_36930 K14231 tRNA-Phe; tRNA Phe
D ERE_T_36760 ERE_T_36760 K14231 tRNA-Phe; tRNA Phe
D ERE_T_37070 ERE_T_37070 K14232 tRNA-Pro; tRNA Pro
D ERE_T_36990 ERE_T_36990 K14232 tRNA-Pro; tRNA Pro
D ERE_T_36780 ERE_T_36780 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36980 ERE_T_36980 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36870 ERE_T_36870 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36770 ERE_T_36770 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36860 ERE_T_36860 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36640 ERE_T_36640 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36800 ERE_T_36800 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36900 ERE_T_36900 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36730 ERE_T_36730 K14235 tRNA-Trp; tRNA Trp
D ERE_T_36830 ERE_T_36830 K14235 tRNA-Trp; tRNA Trp
D ERE_T_36910 ERE_T_36910 K14236 tRNA-Tyr; tRNA Tyr
D ERE_T_36950 ERE_T_36950 K14236 tRNA-Tyr; tRNA Tyr
D ERE_T_36890 ERE_T_36890 K14237 tRNA-Val; tRNA Val
D ERE_28250 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ERE_19110 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D ERE_19100 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D ERE_19120 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ERE_27190 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D ERE_28380 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ERE_12780 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ERE_10590 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ERE_19140 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D ERE_21050 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ERE_28800 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ERE_30570 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ERE_20240 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ERE_16390 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ERE_06240 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D ERE_08490 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ERE_32020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ERE_20630 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ERE_02200 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ERE_30790 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ERE_24320 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ERE_10600 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ERE_32140 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ERE_32150 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ERE_03980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ERE_25410 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:era03060]
D ERE_25170 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D ERE_25750 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D ERE_21010 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D ERE_28910 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D ERE_29790 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ERE_09260 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ERE_15800 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ERE_15830 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ERE_13150 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_15740 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_32860 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_28780 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_27350 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D ERE_28480 signal peptidase I, archaeal type K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:era04122]
D ERE_04980 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_29160 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_05000 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D ERE_13550 Molybdenum cofactor biosynthesis enzyme K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D ERE_21960 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D ERE_13580 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D ERE_13570 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D ERE_29150 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ERE_04360 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D ERE_21970 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D ERE_21950 Predicted metal-dependent protease of the PAD1/JAB1 superfamily K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:era03018]
D ERE_09730 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ERE_29480 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D ERE_15470 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ERE_14210 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D ERE_04690 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D ERE_16010 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D ERE_30920 conserved hypothetical protein YmdA/YtgF K18682 rny; ribonucrease Y [EC:3.1.-.-]
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_29200 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_01780 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_30470 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:era03030]
D ERE_12020 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_34220 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_35310 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_20600 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ERE_14100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ERE_27070 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ERE_29750 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ERE_33040 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D ERE_06380 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ERE_35410 DNA primase (bacterial type) K02316 dnaG; DNA primase [EC:2.7.7.101]
D ERE_14010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D ERE_15720 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D ERE_05480 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ERE_36110 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_30980 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:era03410]
D ERE_24990 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D ERE_23010 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D ERE_16160 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D ERE_35270 Poly(ADP-ribose) polymerase catalytic domain. K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D ERE_33240 Uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D ERE_24560 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D ERE_04050 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D ERE_05480 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ERE_36350 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_18460 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_36110 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_30980 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:era03420]
D ERE_09240 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D ERE_09250 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D ERE_22940 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D ERE_28240 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_35130 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_17740 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_19170 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_05480 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ERE_36110 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_30980 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_15690 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:era03430]
D ERE_06490 Mismatch repair ATPase (MutS family) K03555 mutS; DNA mismatch repair protein MutS
D ERE_10550 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D ERE_27520 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D ERE_28240 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_35130 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_17740 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_19170 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_31040 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D ERE_31050 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D ERE_36350 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_18460 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_14010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D ERE_20600 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ERE_29750 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ERE_27070 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ERE_14100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ERE_12020 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_34220 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_35310 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_36110 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_30980 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:era03440]
D ERE_36350 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_18460 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_14010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D ERE_29730 recF protein K03629 recF; DNA replication and repair protein RecF
D ERE_28820 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D ERE_05140 recombination protein RecR K06187 recR; recombination protein RecR
D ERE_30900 protein RecA K03553 recA; recombination protein RecA
D ERE_05480 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ERE_26710 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D ERE_23520 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ERE_26580 RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ERE_35360 ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I member K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D ERE_20600 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ERE_29750 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ERE_27070 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ERE_14100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ERE_12020 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_34220 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_35310 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_06260 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:era02010]
D ERE_07540 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D ERE_07530 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D ERE_07520 sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D ERE_07510 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D ERE_13530 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D ERE_13520 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D ERE_13510 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D ERE_31460 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D ERE_31470 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D ERE_31480 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D ERE_30340 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D ERE_28370 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ERE_24170 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ERE_24150 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ERE_24140 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ERE_24740 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ERE_24730 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ERE_24720 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ERE_17880 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D ERE_20680 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D ERE_20780 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D ERE_20660 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D ERE_00350 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10236 thuE; trehalose/maltose transport system substrate-binding protein
D ERE_00370 ABC-type sugar transport system, permease component K10238 thuG; trehalose/maltose transport system permease protein
D ERE_03100 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D ERE_03110 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10201 ngcF; N-acetylglucosamine transport system permease protein
D ERE_03120 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10202 ngcG; N-acetylglucosamine transport system permease protein
D ERE_03850 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D ERE_03860 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D ERE_03880 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10440 rbsC; ribose transport system permease protein
D ERE_03870 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D ERE_24760 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ERE_24820 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ERE_24800 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein
D ERE_24810 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D ERE_11510 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D ERE_11500 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D ERE_11490 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D ERE_11410 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D ERE_15960 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D ERE_15950 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D ERE_21370 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D ERE_21410 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D ERE_21400 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D ERE_21390 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D ERE_21380 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D ERE_21250 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D ERE_21230 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D ERE_21240 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ERE_14240 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D ERE_21940 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D ERE_23430 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D ERE_11920 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D ERE_19900 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D ERE_11940 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ERE_11930 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ERE_08880 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D ERE_08870 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D ERE_02680 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D ERE_02690 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D ERE_02670 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D ERE_12790 Predicted permease. K19084 braE; bacitracin transport system permease protein
D ERE_12800 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D ERE_22740 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ERE_22750 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ERE_30280 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D ERE_30270 ABC-type multidrug transport system, ATPase component K16921 ytrB; acetoin utilization transport system ATP-binding protein
D ERE_19880 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D ERE_19870 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D ERE_09810 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_09800 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06750 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_31410 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06070 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06760 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06060 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_31420 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:era02060]
D ERE_25920 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ERE_23080 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D ERE_25930 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D ERE_15700 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D ERE_16560 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D ERE_10620 PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2) K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D ERE_29980 Phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D ERE_29960 Phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D ERE_29970 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D ERE_03560 Phosphotransferase system, mannose/fructose-specific component IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D ERE_03570 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D ERE_03580 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D ERE_03590 PTS system IID component, Man family (TC 4.A.6) K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D ERE_01770 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D ERE_01760 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:era03070]
D ERE_21010 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D ERE_25750 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D ERE_25170 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D ERE_28910 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D ERE_29790 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ERE_09260 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ERE_15830 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ERE_15800 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ERE_17050 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D ERE_35540 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D ERE_00890 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D ERE_19280 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:era02020]
D ERE_11380 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D ERE_11390 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ERE_11510 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D ERE_08630 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D ERE_10540 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D ERE_12290 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_01930 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_14590 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_14720 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_27800 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D ERE_25890 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D ERE_29760 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ERE_12790 Predicted permease. K19084 braE; bacitracin transport system permease protein
D ERE_12800 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D ERE_12870 Signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D ERE_12880 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D ERE_16230 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ERE_02710 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ERE_02700 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ERE_02670 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D ERE_02680 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D ERE_02690 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D ERE_31430 Sporulation initiation factor Spo0A C terminal. K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D ERE_16020 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D ERE_01250 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_01390 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D ERE_19650 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_10190 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D ERE_29020 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_18190 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_02910 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator
D ERE_14600 Global regulator protein family. K03563 csrA; carbon storage regulator
D ERE_29850 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D ERE_08250 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ERE_34910 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ERE_22860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_08120 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_04260 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D ERE_31310 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D ERE_26870 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D ERE_03650 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_15270 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_20650 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_21210 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_24500 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_25520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_15080 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_27840 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D ERE_27850 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ERE_16340 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_32100 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_35640 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_27860 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ERE_16210 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ERE_24780 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ERE_20700 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ERE_24790 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D ERE_09680 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D ERE_20690 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D ERE_00320 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D ERE_19200 Protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D ERE_23730 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D ERE_02850 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:era02024]
D ERE_08600 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D ERE_11730 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D ERE_11720 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D ERE_30950 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D ERE_20870 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D ERE_13230 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D ERE_01250 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_01390 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D ERE_19650 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_10190 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D ERE_29020 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_18190 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_21370 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D ERE_21410 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D ERE_21400 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D ERE_21390 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D ERE_21380 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D ERE_21550 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D ERE_29790 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ERE_21010 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D ERE_25750 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D ERE_25170 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D ERE_28910 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D ERE_09260 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ERE_15830 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ERE_15800 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ERE_31430 Sporulation initiation factor Spo0A C terminal. K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D ERE_02710 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ERE_02700 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ERE_02670 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D ERE_02680 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D ERE_02690 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:era02030]
D ERE_03650 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_15270 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_20650 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_21210 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_24500 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_25520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_15080 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_03850 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D ERE_03860 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D ERE_24760 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ERE_24820 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ERE_27850 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ERE_27840 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D ERE_16340 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_32100 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_35640 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_27830 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D ERE_27860 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ERE_16210 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ERE_27820 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D ERE_26870 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D ERE_28100 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D ERE_27980 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D ERE_16330 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D ERE_27970 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
C 02040 Flagellar assembly [PATH:era02040]
D ERE_28120 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D ERE_28110 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D ERE_28100 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D ERE_28070 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D ERE_28050 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D ERE_27980 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D ERE_16330 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D ERE_27970 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D ERE_27960 Flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ
D ERE_27950 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D ERE_27940 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D ERE_27930 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D ERE_27900 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D ERE_28140 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D ERE_28130 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D ERE_28040 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D ERE_28020 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE
D ERE_22660 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF
D ERE_22650 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG
D ERE_22640 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D ERE_02870 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D ERE_02880 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D ERE_02890 Flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL
D ERE_12290 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_01930 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_14590 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_14720 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_13930 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D ERE_25770 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D ERE_13920 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D ERE_01940 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS
D ERE_02850 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
D ERE_17220 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D ERE_06370 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ERE_34880 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D ERE_27800 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D ERE_09730 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D ERE_16450 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:era01501]
D ERE_09080 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D ERE_21370 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D ERE_21410 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D ERE_21400 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D ERE_21390 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D ERE_21380 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D ERE_14310 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D ERE_14320 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ERE_22840 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:era01502]
D ERE_16230 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ERE_11330 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ERE_32330 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ERE_11320 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D ERE_18400 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ERE_02110 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:era01503]
D ERE_21490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_01870 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_21840 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_08630 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D ERE_10540 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:era01000]
C 01001 Protein kinases [BR:era01001]
D ERE_06190 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D ERE_05030 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D ERE_13170 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D ERE_11380 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D ERE_12870 Signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D ERE_16230 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ERE_02710 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ERE_21770 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D ERE_29850 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D ERE_27850 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ERE_24780 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ERE_20700 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:era01009]
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_05610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_13160 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_23980 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D ERE_06200 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:era01002]
D ERE_27350 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D ERE_31320 type 4 prepilin peptidase 1 . Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ERE_23700 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D ERE_22780 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ERE_24080 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ERE_29500 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ERE_30430 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D ERE_22520 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ERE_03620 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D ERE_21320 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D ERE_09840 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D ERE_16910 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D ERE_01030 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D ERE_28750 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D ERE_28470 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D ERE_01250 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_01390 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D ERE_19650 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_10190 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D ERE_29020 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_18190 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D ERE_17770 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D ERE_30410 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D ERE_34610 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D ERE_12060 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D ERE_14850 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D ERE_08610 oligopeptidase F. Metallo peptidase. MEROPS family M03B K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D ERE_28840 Predicted Zn-dependent peptidases, insulinase-like K06972 PITRM1; presequence protease [EC:3.4.24.-]
D ERE_14200 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D ERE_22060 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D ERE_25150 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D ERE_24050 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D ERE_05470 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D ERE_11840 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D ERE_07290 Leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D ERE_00560 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ERE_22950 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ERE_04720 Cellulase M and related proteins K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D ERE_14310 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D ERE_08630 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D ERE_10540 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D ERE_12480 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_27400 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_14170 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_26990 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_21290 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D ERE_26270 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D ERE_19800 Predicted transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D ERE_13150 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_15740 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_32860 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_28780 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ERE_28480 signal peptidase I, archaeal type K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D ERE_22730 C-terminal peptidase (prc) K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D ERE_31130 SpoIVB peptidase S55. K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D ERE_06010 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D ERE_29060 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D ERE_26680 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:era01003]
D ERE_32370 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D ERE_31440 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D ERE_22840 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ERE_13410 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D ERE_07800 conserved hypothetical protein TIGR02918 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D ERE_07940 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:era01005]
D ERE_05920 conserved hypothetical protein/3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D ERE_05760 Glycosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D ERE_09030 Glycosyltransferases involved in cell wall biogenesis K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:era01011]
D ERE_24940 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ERE_22910 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ERE_25040 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D ERE_30650 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ERE_16070 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ERE_11330 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ERE_32330 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ERE_23020 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ERE_06010 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D ERE_18400 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ERE_02110 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D ERE_28510 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ERE_05600 PAP2 superfamily. K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ERE_22840 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ERE_13410 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D ERE_30640 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ERE_26660 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D ERE_12480 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_27400 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_14170 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_26990 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ERE_22780 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ERE_24080 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ERE_29500 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ERE_16910 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D ERE_01030 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D ERE_28750 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D ERE_28470 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D ERE_32120 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D ERE_21490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_01870 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_21840 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:era01004]
D ERE_13360 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ERE_13310 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D ERE_13340 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ERE_13350 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ERE_11560 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ERE_13330 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ERE_13370 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D ERE_20870 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D ERE_15870 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D ERE_30300 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ERE_31930 Predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ERE_26250 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ERE_24120 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:era01008]
D ERE_19940 thiazolinyl imide reductase K12241 pchG; pyochelin biosynthesis protein PchG
C 01006 Prenyltransferases [BR:era01006]
D ERE_31060 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D ERE_27710 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D ERE_27510 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:era01007]
D ERE_28250 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ERE_27190 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D ERE_03980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ERE_25410 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D ERE_16390 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ERE_30790 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ERE_20630 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ERE_08490 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ERE_32020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ERE_02200 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ERE_10590 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ERE_21050 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ERE_19140 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D ERE_10600 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ERE_28800 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ERE_20240 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ERE_24320 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ERE_30570 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ERE_28380 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ERE_12780 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ERE_32140 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ERE_32150 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ERE_24010 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ERE_18030 Aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D ERE_08100 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D ERE_11960 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D ERE_17790 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ERE_06090 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ERE_02770 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D ERE_27130 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D ERE_06540 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:era00194]
D ERE_03070 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ERE_10320 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ERE_03060 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ERE_10330 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ERE_03040 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ERE_10340 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ERE_03030 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D ERE_10360 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D ERE_10370 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D ERE_03000 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ERE_10380 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ERE_10390 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:era03000]
D ERE_19990 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_35870 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_31710 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D ERE_09470 AraC-type DNA-binding domain-containing proteins K07506 K07506; AraC family transcriptional regulator
D ERE_01750 Transcriptional regulators of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D ERE_04570 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ERE_20480 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ERE_08310 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ERE_24190 Transcriptional regulators K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D ERE_26150 Transcriptional regulators K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D ERE_04610 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D ERE_24630 Transcriptional regulators K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D ERE_03540 Transcriptional regulators K03710 K03710; GntR family transcriptional regulator
D ERE_03550 Transcriptional regulators K03710 K03710; GntR family transcriptional regulator
D ERE_24480 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D ERE_11420 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D ERE_30260 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D ERE_05700 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ERE_04840 Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D ERE_18750 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D ERE_04970 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D ERE_11600 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D ERE_02810 Predicted transcriptional regulators K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D ERE_13880 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D ERE_17950 Predicted transcriptional regulators K10947 K10947; PadR family transcriptional regulator
D ERE_06460 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D ERE_06080 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D ERE_19860 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D ERE_14320 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ERE_02150 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ERE_13020 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D ERE_22760 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator
D ERE_28150 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D ERE_32500 Helix-turn-helix. K07726 K07726; putative transcriptional regulator
D ERE_06430 Predicted transcriptional regulator K07726 K07726; putative transcriptional regulator
D ERE_09750 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D ERE_20000 transcriptional regulator K07727 K07727; putative transcriptional regulator
D ERE_26060 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator
D ERE_19810 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator
D ERE_00410 Helix-turn-helix. K07729 K07729; putative transcriptional regulator
D ERE_19210 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator
D ERE_16550 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D ERE_23760 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D ERE_32480 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_29890 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_17710 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_08380 Transcriptional regulators, similar to M. xanthus CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D ERE_31100 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D ERE_29230 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D ERE_16520 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D ERE_30600 mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:era03021]
D ERE_15690 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D ERE_25690 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ERE_25680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ERE_26540 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D ERE_17220 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D ERE_06370 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ERE_34880 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D ERE_08420 RNA polymerase sigma factor, sigma-70 family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D ERE_28190 RNA polymerase, sigma 27/28 subunit, RpsK/SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D ERE_30770 RNA polymerase, sigma subunit, RpsG/SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D ERE_27800 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D ERE_29580 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D ERE_31030 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D ERE_25740 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D ERE_28500 Transcription elongation factor K03624 greA; transcription elongation factor GreA
D ERE_02190 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D ERE_16010 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:era03019]
D ERE_26360 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D ERE_15850 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ERE_30920 conserved hypothetical protein YmdA/YtgF K18682 rny; ribonucrease Y [EC:3.1.-.-]
D ERE_15470 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ERE_10530 uncharacterized domain HDIG K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D ERE_14210 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D ERE_04690 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D ERE_09730 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ERE_29480 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D ERE_16010 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D ERE_20590 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ERE_29200 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_01780 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_30470 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ERE_02910 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator
D ERE_14600 Global regulator protein family. K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:era03011]
D ERE_27770 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D ERE_25310 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D ERE_25100 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D ERE_25200 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D ERE_14020 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D ERE_25230 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D ERE_25380 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D ERE_25110 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D ERE_25670 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D ERE_25120 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D ERE_25240 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D ERE_29490 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D ERE_15790 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D ERE_14000 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D ERE_25330 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D ERE_28350 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D ERE_25720 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D ERE_25340 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D ERE_25370 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D ERE_25360 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D ERE_25220 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D ERE_13960 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D ERE_25730 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D ERE_25700 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D ERE_11880 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D ERE_25270 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D ERE_25180 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D ERE_25300 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D ERE_25080 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D ERE_25210 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D ERE_15750 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D ERE_29620 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D ERE_26350 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D ERE_25320 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D ERE_25350 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D ERE_25260 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D ERE_26330 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D ERE_26610 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D ERE_25290 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D ERE_25190 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D ERE_16000 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D ERE_15890 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D ERE_29770 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D ERE_29630 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D ERE_R_37130 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ERE_R_37120 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:era03009]
D ERE_15850 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ERE_28830 GTP-binding protein Era K03595 era; GTPase
D ERE_26320 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D ERE_29580 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D ERE_31030 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D ERE_25740 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D ERE_26470 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D ERE_04500 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D ERE_06220 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D ERE_26510 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D ERE_29170 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D ERE_29830 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D ERE_24880 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D ERE_30610 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D ERE_14070 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D ERE_31080 hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D ERE_16370 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D ERE_27630 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D ERE_25390 Predicted SAM-dependent methyltransferases K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D ERE_12750 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D ERE_06210 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D ERE_12470 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ERE_10520 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ERE_17720 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ERE_26450 Pseudouridylate synthases, 23S RNA-specific K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D ERE_24850 Pseudouridylate synthases, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D ERE_28200 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D ERE_27340 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D ERE_30970 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D ERE_22400 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D ERE_15040 Acetyltransferase (GNAT) family. K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D ERE_15770 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D ERE_26530 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D ERE_29180 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D ERE_26360 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D ERE_16380 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D ERE_14210 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D ERE_06180 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D ERE_30290 ribosome-associated GTPase EngA K03977 engA; GTPase
D ERE_15730 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D ERE_06920 GTP-binding protein HflX K03665 hflX; GTPase
D ERE_02940 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D ERE_29540 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D ERE_29590 Uncharacterized protein conserved in bacteria K09748 rimP; ribosome maturation factor RimP
D ERE_29740 Uncharacterized conserved protein K14761 rlbA; ribosome-associated protein
D ERE_26280 iojap-related protein K09710 ybeB; ribosome-associated protein
D ERE_27580 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D ERE_26310 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein
D ERE_11350 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D ERE_16540 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D ERE_15900 Predicted metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:era03016]
D ERE_22390 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D ERE_32820 uncharacterized domain HDIG K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D ERE_24310 uncharacterized domain HDIG K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D ERE_33150 Uncharacterized conserved protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D ERE_28250 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ERE_24320 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ERE_20630 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ERE_32020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ERE_27190 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D ERE_30790 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ERE_02200 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ERE_10590 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ERE_28380 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ERE_12780 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ERE_21050 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ERE_28800 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ERE_30570 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ERE_20240 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ERE_16390 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ERE_08490 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ERE_10600 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ERE_32140 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ERE_32150 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ERE_03980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ERE_25410 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D ERE_26190 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D ERE_02100 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D ERE_14180 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D ERE_07090 conserved hypothetical protein TIGR00104 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D ERE_11910 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D ERE_18470 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D ERE_29520 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D ERE_04980 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_29160 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_02940 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D ERE_27510 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D ERE_29810 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D ERE_29820 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D ERE_13490 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D ERE_29780 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D ERE_37150 Bacterial RNase P class A K01978 rnpB; M1 RNA
D ERE_19140 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D ERE_25420 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D ERE_19190 Uncharacterized conserved protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D ERE_04950 Cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D ERE_02180 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D ERE_26740 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D ERE_29130 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D ERE_15760 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D ERE_06360 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D ERE_11950 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D ERE_20580 rRNA methylases K03437 spoU; RNA methyltransferase, TrmH family
D ERE_05000 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D ERE_18070 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D ERE_26170 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D ERE_32160 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D ERE_31550 Uncharacterized protein conserved in bacteria K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D ERE_28920 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D ERE_29150 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ERE_24230 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D ERE_22410 Inactive homolog of metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D ERE_22370 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D ERE_22420 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D ERE_18050 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D ERE_15920 cytidyltransferase-related domain K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D ERE_15470 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ERE_29480 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:era03012]
D ERE_29550 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D ERE_29640 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D ERE_09410 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D ERE_11360 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D ERE_27760 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D ERE_25640 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D ERE_15970 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D ERE_27720 ribosome recycling factor K02838 frr; ribosome recycling factor
D ERE_15980 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D ERE_24980 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D ERE_25140 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D ERE_16480 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D ERE_22710 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:era03110]
D ERE_08320 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D ERE_21280 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D ERE_19090 endopeptidase Clp ATP-binding regulatory subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D ERE_05610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_13160 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_29200 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_01780 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_30470 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ERE_10000 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D ERE_29190 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D ERE_06300 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D ERE_18130 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33
D ERE_29220 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D ERE_10010 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D ERE_30460 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D ERE_08630 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D ERE_10540 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D ERE_00560 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ERE_22950 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ERE_10390 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D ERE_11310 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D ERE_05590 PPIC-type PPIASE domain. K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D ERE_18780 thioredoxin K03671 TXN; thioredoxin
D ERE_21980 Thioredoxin domain-containing protein K03671 TXN; thioredoxin
D ERE_11820 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:era04131]
D ERE_32940 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D ERE_14350 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D ERE_15630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ERE_23550 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D ERE_13640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ERE_05610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_13160 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_25470 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:era03051]
D ERE_05610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_13160 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:era03032]
D ERE_19990 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_35870 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_35270 Poly(ADP-ribose) polymerase catalytic domain. K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D ERE_35520 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ERE_24280 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ERE_29760 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ERE_33040 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D ERE_25060 replicative DNA helicase loader DnaI K02315 dnaC; DNA replication protein DnaC
D ERE_06380 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ERE_35410 DNA primase (bacterial type) K02316 dnaG; DNA primase [EC:2.7.7.101]
D ERE_14010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D ERE_20600 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ERE_29750 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ERE_27070 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ERE_14100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ERE_12020 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_34220 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_35310 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_15720 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D ERE_05480 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ERE_36110 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_30980 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_30370 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ERE_29720 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ERE_30360 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ERE_28160 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D ERE_35080 Topoisomerase IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D ERE_31600 Topoisomerase IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:era03036]
D ERE_19990 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_35870 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_15850 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ERE_35270 Poly(ADP-ribose) polymerase catalytic domain. K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D ERE_32940 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D ERE_14350 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D ERE_35520 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ERE_24280 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ERE_29760 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ERE_15840 condensin subunit Smc K03529 smc; chromosome segregation protein
D ERE_27010 Uncharacterized conserved protein K05896 scpA; segregation and condensation protein A
D ERE_27000 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D ERE_24250 Septum formation initiator. K13052 divIC; cell division protein DivIC
D ERE_22750 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ERE_32380 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D ERE_23930 DNA segregation ATPase FtsK/SpoIIIE and related proteins K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D ERE_30620 hypothetical protein K03586 ftsL; cell division protein FtsL
D ERE_22740 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ERE_26690 cell division protein ZapA K09888 zapA; cell division protein ZapA
D ERE_21490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_01870 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_21840 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_02730 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D ERE_02740 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D ERE_02750 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D ERE_27430 Septum formation topological specificity factor K03608 minE; cell division topological specificity factor
D ERE_27360 Uncharacterized protein conserved in bacteria K09772 sepF; cell division inhibitor SepF
D ERE_09230 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D ERE_27480 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D ERE_27470 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D ERE_27460 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D ERE_27420 Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D ERE_32470 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D ERE_29880 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D ERE_07380 CobQ/CobB/MinD/ParA nucleotide binding domain. K03496 parA; chromosome partitioning protein
D ERE_34700 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D ERE_32480 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_29890 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_17710 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_29820 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D ERE_29830 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D ERE_36220 Site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC
D ERE_26240 Site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC
D ERE_10790 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D ERE_12610 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D ERE_04770 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D ERE_06840 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D ERE_23350 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D ERE_17620 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D ERE_31790 Uncharacterized conserved protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D ERE_35220 Uncharacterized conserved protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D ERE_21260 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
D ERE_22890 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:era03400]
D ERE_16160 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D ERE_24990 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D ERE_23010 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D ERE_35270 Poly(ADP-ribose) polymerase catalytic domain. K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D ERE_15690 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D ERE_03690 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D ERE_03840 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D ERE_12070 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D ERE_22990 Isopentenyldiphosphate isomerase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D ERE_12460 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D ERE_30320 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D ERE_33240 Uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D ERE_24560 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D ERE_04050 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D ERE_36350 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_18460 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ERE_36110 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_30980 NAD-dependent DNA ligase (contains BRCT domain type II) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ERE_05480 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ERE_09240 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D ERE_09250 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D ERE_22940 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D ERE_28240 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_35130 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_17740 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_19170 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ERE_25690 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ERE_25680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ERE_26540 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D ERE_06490 Mismatch repair ATPase (MutS family) K03555 mutS; DNA mismatch repair protein MutS
D ERE_10550 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D ERE_27520 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D ERE_31040 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D ERE_31050 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D ERE_20600 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ERE_29750 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ERE_27070 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ERE_14100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ERE_12020 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_34220 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_35310 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ERE_14010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D ERE_35360 ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I member K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D ERE_30900 protein RecA K03553 recA; recombination protein RecA
D ERE_26710 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D ERE_06260 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D ERE_19080 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D ERE_05950 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D ERE_29730 recF protein K03629 recF; DNA replication and repair protein RecF
D ERE_23520 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ERE_26580 RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ERE_28820 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D ERE_05140 recombination protein RecR K06187 recR; recombination protein RecR
D ERE_31110 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D ERE_26440 Penicillin-binding protein-related factor A, putative recombinase K03700 recU; recombination protein U
D ERE_05570 recombination helicase AddA, Firmicutes type K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D ERE_05560 ATP-dependent nuclease, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D ERE_07630 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D ERE_30370 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ERE_29720 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ERE_30360 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ERE_28160 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D ERE_35520 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ERE_24280 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ERE_04690 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D ERE_02470 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D ERE_20140 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D ERE_26270 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D ERE_19800 Predicted transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D ERE_30910 Uncharacterized protein conserved in bacteria K03565 recX; regulatory protein
D ERE_29530 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:era03029]
D ERE_29550 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D ERE_29640 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D ERE_27760 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D ERE_25640 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D ERE_05450 Superfamily II DNA and RNA helicases K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D ERE_28830 GTP-binding protein Era K03595 era; GTPase
D ERE_03980 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ERE_32020 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ERE_10590 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ERE_28800 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ERE_30790 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ERE_19110 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D ERE_19100 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D ERE_19120 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ERE_14010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D ERE_29200 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_01780 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_29220 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D ERE_30470 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ERE_30460 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D ERE_10000 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D ERE_29190 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D ERE_06300 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D ERE_04980 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_29160 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_29790 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ERE_05610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_13160 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:era02000]
D ERE_19880 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D ERE_19870 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D ERE_09810 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_09800 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06750 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_31410 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06070 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06760 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_06060 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_31420 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ERE_02830 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D ERE_01190 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D ERE_20550 ATPase components of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein
D ERE_07540 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D ERE_07530 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D ERE_07520 sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D ERE_07510 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D ERE_13530 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D ERE_13520 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D ERE_13510 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D ERE_31460 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D ERE_31470 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D ERE_31480 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D ERE_30340 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D ERE_30030 ABC-type sugar transport system, periplasmic component K25086 musE; maltose transport system substrate-binding protein
D ERE_04540 hypothetical protein K25086 musE; maltose transport system substrate-binding protein
D ERE_04550 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K25087 musF; maltose transport system permease protein
D ERE_30040 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K25087 musF; maltose transport system permease protein
D ERE_04560 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25088 musG; maltose transport system permease protein
D ERE_30050 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25088 musG; maltose transport system permease protein
D ERE_28370 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ERE_24170 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ERE_24150 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ERE_24140 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ERE_24740 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ERE_24730 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ERE_24720 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ERE_00350 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10236 thuE; trehalose/maltose transport system substrate-binding protein
D ERE_00370 ABC-type sugar transport system, permease component K10238 thuG; trehalose/maltose transport system permease protein
D ERE_03100 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D ERE_03110 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10201 ngcF; N-acetylglucosamine transport system permease protein
D ERE_03120 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10202 ngcG; N-acetylglucosamine transport system permease protein
D ERE_17880 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D ERE_20680 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D ERE_20780 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D ERE_20660 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D ERE_24760 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ERE_24820 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ERE_24800 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein
D ERE_24810 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D ERE_03850 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D ERE_03860 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10439 rbsB; ribose transport system substrate-binding protein
D ERE_03880 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10440 rbsC; ribose transport system permease protein
D ERE_03870 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D ERE_04640 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25670 fusA; fructooligosaccharide transport system substrate-binding protein
D ERE_04620 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K25671 fusC; fructooligosaccharide transport system permease protein
D ERE_04630 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25672 fusB; fructooligosaccharide transport system permease protein
D ERE_09550 ABC-type sugar transport system, periplasmic component K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D ERE_09670 ABC-type sugar transport system, periplasmic component K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D ERE_09660 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D ERE_09650 ABC-type sugar transport system, permease component K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D ERE_28970 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D ERE_24600 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K02025 ABC.MS.P; multiple sugar transport system permease protein
D ERE_24590 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K02026 ABC.MS.P1; multiple sugar transport system permease protein
D ERE_11510 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D ERE_11500 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D ERE_11490 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D ERE_11410 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D ERE_15960 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D ERE_15950 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D ERE_03960 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D ERE_04280 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D ERE_03950 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D ERE_03940 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D ERE_04300 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D ERE_31960 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D ERE_31970 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K02029 ABC.PA.P; polar amino acid transport system permease protein
D ERE_31980 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D ERE_21370 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D ERE_21410 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein
D ERE_21400 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D ERE_21390 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D ERE_21380 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D ERE_29430 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D ERE_29420 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D ERE_29410 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D ERE_21250 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D ERE_21230 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D ERE_21240 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ERE_14240 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D ERE_21940 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D ERE_19910 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D ERE_23440 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D ERE_23430 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D ERE_11920 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D ERE_19900 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D ERE_11940 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ERE_11930 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ERE_19890 ATPase components of various ABC-type transport systems, contain duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ERE_23420 ATPase components of various ABC-type transport systems, contain duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ERE_08880 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D ERE_08870 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D ERE_02680 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D ERE_02690 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D ERE_02670 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D ERE_30510 ABC-type transport system involved in multi-copper enzyme maturation, permease component K25151 gldF; gliding motility-associated transport system permease protein
D ERE_23810 ABC-2 type transporter. K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D ERE_23800 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D ERE_23790 ABC-type multidrug transport system, ATPase component K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D ERE_12790 Predicted permease. K19084 braE; bacitracin transport system permease protein
D ERE_12800 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D ERE_30280 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D ERE_30270 ABC-type multidrug transport system, ATPase component K16921 ytrB; acetoin utilization transport system ATP-binding protein
D ERE_06650 ABC-type antimicrobial peptide transport system, permease component K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D ERE_06670 ABC-type antimicrobial peptide transport system, ATPase component K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D ERE_22740 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ERE_22750 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ERE_04230 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D ERE_21450 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D ERE_12930 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_12960 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_31510 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_10490 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_10450 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_10020 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_10090 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_18320 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_19740 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_25840 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_04220 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_28960 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ERE_04820 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D ERE_03640 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D ERE_21640 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D ERE_18010 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D ERE_25810 Predicted permease. K02004 ABC.CD.P; putative ABC transport system permease protein
D ERE_25830 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D ERE_01600 Uncharacterized protein conserved in bacteria K02004 ABC.CD.P; putative ABC transport system permease protein
D ERE_04810 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ERE_03630 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ERE_21630 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ERE_01590 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ERE_18020 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ERE_12840 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D ERE_18850 Di-and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D ERE_20950 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_23210 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_24640 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_24540 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_20300 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D ERE_04590 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_17800 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_04250 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_31140 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_30000 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_24890 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_14760 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D ERE_09910 Major Facilitator Superfamily. K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D ERE_01090 Major Facilitator Superfamily. K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D ERE_25470 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
D ERE_25920 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ERE_23080 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D ERE_25930 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D ERE_15700 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D ERE_16560 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D ERE_10620 PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2) K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D ERE_01770 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D ERE_29980 Phosphotransferase system cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D ERE_29960 Phosphotransferase system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D ERE_29970 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D ERE_03560 Phosphotransferase system, mannose/fructose-specific component IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D ERE_03570 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D ERE_03580 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D ERE_03590 PTS system IID component, Man family (TC 4.A.6) K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D ERE_22850 ammonium transporter K03320 amt; ammonium transporter, Amt family
D ERE_28850 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D ERE_12970 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter
D ERE_25400 Mg2+ and Co2+ transporters K03284 corA; magnesium transporter
D ERE_26030 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D ERE_32350 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ERE_34810 Subtilisin-like serine proteases K21449 ata; trimeric autotransporter adhesin
D ERE_10290 Putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein
D ERE_27260 sugar (Glycoside-Pentoside-Hexuronide) transporter K11104 melB; melibiose permease
D ERE_21110 Spore germination protein. K06311 yndE; spore germination protein
D ERE_10400 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D ERE_21820 Predicted membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D ERE_23110 Predicted membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D ERE_13860 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D ERE_06710 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D ERE_06720 SSS sodium solute transporter superfamily K11928 putP; sodium/proline symporter
D ERE_28530 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family
D ERE_07560 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D ERE_31120 potassium/proton antiporter, CPA1 family (TC 2.A.36) K11105 cvrA; potassium/hydrogen antiporter
D ERE_09360 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein
D ERE_09350 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D ERE_14050 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D ERE_05390 uracil-xanthine permease K02824 uraA; uracil permease
D ERE_20150 Permeases K06901 pbuG; adenine/guanine/hypoxanthine permease
D ERE_28430 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D ERE_00260 Chromate transport protein ChrA K07240 chrA; chromate transporter
D ERE_00270 Chromate transport protein ChrA K07240 chrA; chromate transporter
D ERE_04680 Sulfate permease and related transporters (MFS superfamily) K03321 TC.SULP; sulfate permease, SulP family
D ERE_09860 tripartite ATP-independent periplasmic transporter solute receptor, DctP family K21395 yiaO; TRAP-type transport system periplasmic protein
D ERE_23170 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D ERE_27570 Uncharacterized membrane protein, putative virulence factor K06409 spoVB; stage V sporulation protein B
D ERE_16470 Membrane protein involved in the export of O-antigen and teichoic acid K06409 spoVB; stage V sporulation protein B
D ERE_31950 Predicted permeases K24180 mleP; malate permease and related proteins
D ERE_26010 Predicted permeases K24180 mleP; malate permease and related proteins
D ERE_24440 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D ERE_24450 Branched-chain amino acid transport protein (AzlD). K26606 azlD; branched chain amino acid efflux pump
D ERE_22440 Predicted membrane protein K23675 fmnP; riboflavin transporter
D ERE_02760 Protein of unknown function (DUF1393). K23675 fmnP; riboflavin transporter
D ERE_30780 hypothetical protein K23675 fmnP; riboflavin transporter
D ERE_13870 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D ERE_26940 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D ERE_26980 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D ERE_26960 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ERE_26970 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D ERE_21550 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D ERE_06680 RND family efflux transporter, MFP subunit K24950 yknX; membrane fusion protein, antimicrobial resistance system
D ERE_13170 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D ERE_09110 Capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D ERE_13180 Capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D ERE_05650 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D ERE_05670 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D ERE_05680 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D ERE_17980 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:era02044]
D ERE_31320 type 4 prepilin peptidase 1 . Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ERE_04260 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D ERE_31310 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D ERE_31170 type II secretion system protein E (GspE) K02652 pilB; type IV pilus assembly protein PilB
D ERE_15510 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D ERE_31330 Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM
D ERE_31180 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D ERE_15560 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D ERE_08250 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ERE_34910 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ERE_27120 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA
D ERE_02960 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D ERE_27080 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D ERE_27900 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D ERE_30230 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein
D ERE_28110 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D ERE_16330 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D ERE_27970 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D ERE_27960 Flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ
D ERE_27950 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D ERE_27940 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D ERE_27930 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D ERE_17050 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D ERE_35540 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D ERE_00890 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D ERE_19280 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D ERE_16990 Domain of unknown function DUF87. K12053 comB4; ComB4 competence protein
D ERE_09260 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ERE_21010 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D ERE_25750 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D ERE_25170 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D ERE_15800 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ERE_15830 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ERE_28910 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D ERE_29790 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ERE_07840 Domain of unknown function (DUF1975). K12268 asp1; accessory secretory protein Asp1
D ERE_07820 hypothetical protein K12270 asp3; accessory secretory protein Asp3
C 02042 Bacterial toxins [BR:era02042]
D ERE_32350 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ERE_15060 Predicted membrane protein, hemolysin III homolog K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:era02022]
D ERE_11380 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D ERE_11390 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ERE_25890 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D ERE_12870 Signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D ERE_12880 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D ERE_16230 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ERE_02710 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ERE_02700 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ERE_21770 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D ERE_25800 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D ERE_18370 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D ERE_29850 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D ERE_31430 Sporulation initiation factor Spo0A C terminal. K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D ERE_04150 Response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D ERE_27850 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ERE_16340 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_32100 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_35640 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_27860 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ERE_16210 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ERE_24780 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ERE_20700 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ERE_24790 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D ERE_09680 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D ERE_20690 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D ERE_00320 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:era02035]
D ERE_27850 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ERE_27840 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D ERE_27830 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D ERE_27820 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D ERE_26870 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D ERE_27860 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ERE_16340 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_32100 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_35640 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ERE_16210 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ERE_03650 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_15270 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_20650 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_21210 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_24500 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_25520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_15080 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ERE_28070 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D ERE_27960 Flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ
D ERE_27950 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D ERE_27940 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D ERE_27930 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D ERE_27900 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D ERE_28100 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D ERE_27980 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D ERE_16330 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D ERE_27970 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D ERE_28110 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D ERE_28120 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D ERE_28050 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D ERE_28140 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D ERE_28130 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D ERE_28040 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D ERE_22660 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF
D ERE_22650 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG
D ERE_22640 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D ERE_28020 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE
D ERE_02870 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D ERE_02880 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D ERE_02890 Flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL
D ERE_23220 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D ERE_20440 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D ERE_12290 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_01930 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_14590 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_14720 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D ERE_13930 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D ERE_25770 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D ERE_13920 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D ERE_01940 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS
D ERE_27800 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D ERE_02900 Uncharacterized protein conserved in bacteria K13626 fliW; flagellar assembly factor FliW
D ERE_02850 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
D ERE_13940 Uncharacterized flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D ERE_27890 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D ERE_27880 ATPases involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG
D ERE_31180 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D ERE_15560 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D ERE_04260 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D ERE_31310 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D ERE_31170 type II secretion system protein E (GspE) K02652 pilB; type IV pilus assembly protein PilB
D ERE_15510 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D ERE_31320 type 4 prepilin peptidase 1 . Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ERE_31330 Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM
D ERE_08250 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ERE_34910 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:era04812]
D ERE_09230 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D ERE_27480 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D ERE_35340 StbA protein. K18640 parM; plasmid segregation protein ParM
D ERE_35490 hypothetical protein K18640 parM; plasmid segregation protein ParM
D ERE_17190 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D ERE_07460 hypothetical protein K18640 parM; plasmid segregation protein ParM
D ERE_02730 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D ERE_02740 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D ERE_02750 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D ERE_27430 Septum formation topological specificity factor K03608 minE; cell division topological specificity factor
D ERE_32470 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D ERE_29880 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D ERE_07380 CobQ/CobB/MinD/ParA nucleotide binding domain. K03496 parA; chromosome partitioning protein
D ERE_34700 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D ERE_32480 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_29890 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ERE_17710 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:era04147]
D ERE_05610 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_13160 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D ERE_09730 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ERE_15630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ERE_15620 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ERE_13640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ERE_32940 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D ERE_14350 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D ERE_30470 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ERE_29200 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_01780 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ERE_04380 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ERE_08140 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ERE_25640 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D ERE_02100 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D ERE_06110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ERE_20870 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D ERE_22580 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ERE_25160 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D ERE_07080 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D ERE_31560 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ERE_27170 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ERE_17820 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D ERE_01850 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D ERE_08550 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D ERE_22860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_08120 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ERE_28860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ERE_18860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ERE_05550 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ERE_22540 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D ERE_15610 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ERE_23550 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:era02048]
D ERE_07630 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D ERE_07700 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D ERE_07640 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D ERE_12120 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D ERE_07660 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D ERE_07650 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D ERE_07670 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d
D ERE_12170 RAMP superfamily. K19134 csx10; CRISPR-associated protein Csx10
D ERE_17660 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D ERE_06800 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D ERE_17610 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D ERE_06820 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D ERE_06870 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D ERE_17650 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D ERE_06880 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D ERE_11850 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D ERE_19990 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_35870 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ERE_17380 GTPase subunit of restriction endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D ERE_17600 Restriction endonuclease K07448 mrr; restriction system protein
D ERE_16640 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ERE_02560 PemK-like protein. K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ERE_32340 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ERE_19500 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ERE_08510 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D ERE_10730 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D ERE_08500 toxin-antitoxin system, toxin component, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D ERE_05030 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D ERE_20220 Uncharacterized conserved protein K18843 hicB; antitoxin HicB
D ERE_10720 Plasmid stabilisation system protein. K19092 parE1_3_4; toxin ParE1/3/4
D ERE_13020 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D ERE_09230 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D ERE_27480 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D ERE_28250 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ERE_03800 hypothetical protein K19167 abiQ; protein AbiQ
D ERE_04980 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ERE_29160 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:era01504]
D ERE_07560 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D ERE_24020 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein
D ERE_01090 Major Facilitator Superfamily. K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D ERE_14310 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D ERE_14320 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ERE_16230 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:era03100]
D ERE_T_36740 ERE_T_36740 K14219 tRNA-Arg; tRNA Arg
D ERE_T_37010 ERE_T_37010 K14219 tRNA-Arg; tRNA Arg
D ERE_T_36720 ERE_T_36720 K14219 tRNA-Arg; tRNA Arg
D ERE_T_36610 ERE_T_36610 K14220 tRNA-Asn; tRNA Asn
D ERE_T_36880 ERE_T_36880 K14221 tRNA-Asp; tRNA Asp
D ERE_T_36620 ERE_T_36620 K14222 tRNA-Cys; tRNA Cys
D ERE_T_36790 ERE_T_36790 K14222 tRNA-Cys; tRNA Cys
D ERE_T_36970 ERE_T_36970 K14223 tRNA-Gln; tRNA Gln
D ERE_T_37030 ERE_T_37030 K14223 tRNA-Gln; tRNA Gln
D ERE_T_36600 ERE_T_36600 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36960 ERE_T_36960 K14224 tRNA-Glu; tRNA Glu
D ERE_T_37080 ERE_T_37080 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36710 ERE_T_36710 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36840 ERE_T_36840 K14224 tRNA-Glu; tRNA Glu
D ERE_T_36700 ERE_T_36700 K14225 tRNA-Gly; tRNA Gly
D ERE_T_37000 ERE_T_37000 K14225 tRNA-Gly; tRNA Gly
D ERE_T_36660 ERE_T_36660 K14225 tRNA-Gly; tRNA Gly
D ERE_T_36670 ERE_T_36670 K14225 tRNA-Gly; tRNA Gly
D ERE_T_37020 ERE_T_37020 K14226 tRNA-His; tRNA His
D ERE_T_36680 ERE_T_36680 K14227 tRNA-Ile; tRNA Ile
D ERE_T_36630 ERE_T_36630 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37090 ERE_T_37090 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37100 ERE_T_37100 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37050 ERE_T_37050 K14228 tRNA-Leu; tRNA Leu
D ERE_T_37110 ERE_T_37110 K14228 tRNA-Leu; tRNA Leu
D ERE_T_36650 ERE_T_36650 K14229 tRNA-Lys; tRNA Lys
D ERE_T_37060 ERE_T_37060 K14229 tRNA-Lys; tRNA Lys
D ERE_T_36940 ERE_T_36940 K14229 tRNA-Lys; tRNA Lys
D ERE_T_37040 ERE_T_37040 K14229 tRNA-Lys; tRNA Lys
D ERE_T_36750 ERE_T_36750 K14229 tRNA-Lys; tRNA Lys
D ERE_T_36920 ERE_T_36920 K14230 tRNA-Met; tRNA Met
D ERE_T_36850 ERE_T_36850 K14230 tRNA-Met; tRNA Met
D ERE_T_36690 ERE_T_36690 K14231 tRNA-Phe; tRNA Phe
D ERE_T_36930 ERE_T_36930 K14231 tRNA-Phe; tRNA Phe
D ERE_T_36760 ERE_T_36760 K14231 tRNA-Phe; tRNA Phe
D ERE_T_37070 ERE_T_37070 K14232 tRNA-Pro; tRNA Pro
D ERE_T_36990 ERE_T_36990 K14232 tRNA-Pro; tRNA Pro
D ERE_T_36780 ERE_T_36780 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36980 ERE_T_36980 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36870 ERE_T_36870 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36770 ERE_T_36770 K14233 tRNA-Ser; tRNA Ser
D ERE_T_36860 ERE_T_36860 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36640 ERE_T_36640 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36800 ERE_T_36800 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36900 ERE_T_36900 K14234 tRNA-Thr; tRNA Thr
D ERE_T_36730 ERE_T_36730 K14235 tRNA-Trp; tRNA Trp
D ERE_T_36830 ERE_T_36830 K14235 tRNA-Trp; tRNA Trp
D ERE_T_36910 ERE_T_36910 K14236 tRNA-Tyr; tRNA Tyr
D ERE_T_36950 ERE_T_36950 K14236 tRNA-Tyr; tRNA Tyr
D ERE_T_36890 ERE_T_36890 K14237 tRNA-Val; tRNA Val
D ERE_R_37130 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ERE_R_37120 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ERE_37150 Bacterial RNase P class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D ERE_18890 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D ERE_07710 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D ERE_13450 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D ERE_14650 Saccharopine dehydrogenase and related proteins K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D ERE_18720 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D ERE_28320 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D ERE_20460 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D ERE_24860 pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D ERE_06030 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D ERE_15050 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D ERE_16570 Transglutaminase-like enzymes, putative cysteine proteases K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D ERE_03140 conserved hypothetical protein TIGR02336 K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D ERE_30590 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D ERE_26790 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D ERE_18880 Uncharacterized protein conserved in bacteria K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D ERE_17260 Uncharacterized conserved protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D ERE_01490 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D ERE_12230 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D ERE_35800 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D ERE_09180 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D ERE_08790 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D ERE_08430 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D ERE_22930 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D ERE_00210 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D ERE_15430 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D ERE_36080 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D ERE_15320 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D ERE_05620 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D ERE_05460 conserved hypothetical protein TIGR00051 K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D ERE_24240 Stage II sporulation protein E (SpoIIE). K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D ERE_16500 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D ERE_13970 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D ERE_04490 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D ERE_22030 Glycosidases K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D ERE_17830 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D ERE_20750 Endoglucanase Y K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D ERE_00380 Protein of unknown function (DUF2961). K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D ERE_19410 Protein of unknown function (DUF2961). K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D ERE_06530 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ERE_06250 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D ERE_15160 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D ERE_06630 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D ERE_27750 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D ERE_08580 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D ERE_22790 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D ERE_17200 ATPase family associated with various cellular activities (AAA). K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D ERE_16590 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D ERE_13320 acetyl-CoA carboxylase carboxyltransferase subunit alpha K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D ERE_26850 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D ERE_26800 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D ERE_23740 copper-(or silver)-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D ERE_11610 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D ERE_30530 ATPase, P-type (transporting), HAD superfamily, subfamily IC K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D ERE_03180 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D ERE_03600 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains K19504 gfrE; glucoselysine-6-phosphate deglycase
D ERE_03520 Predicted phosphosugar isomerases K19510 gfrF; fructoselysine-6-phosphate deglycase
C 99982 Energy metabolism
D ERE_26830 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D ERE_26820 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D ERE_26810 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D ERE_04990 FeS cluster assembly scaffold protein NifU, Clostridium type K04488 iscU; nitrogen fixation protein NifU and related proteins
D ERE_12570 hypothetical protein K03839 fldA; flavodoxin I
D ERE_22550 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D ERE_30480 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D ERE_10610 hypothetical protein K15051 endA; DNA-entry nuclease
D ERE_34600 hypothetical protein K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D ERE_04730 Lactoylglutathione lyase and related lyases K08234 yaeR; glyoxylase I family protein
D ERE_10430 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. K08234 yaeR; glyoxylase I family protein
D ERE_27370 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D ERE_05400 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D ERE_23180 Predicted unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D ERE_35010 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D ERE_06620 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D ERE_22450 Transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D ERE_30710 Predicted exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D ERE_21300 trigger factor K03545 tig; trigger factor
D ERE_12890 trigger factor K03545 tig; trigger factor
D ERE_21060 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 tig; trigger factor
D ERE_15460 SsrA-binding protein K03664 smpB; SsrA-binding protein
D ERE_11980 Hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D ERE_28180 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D ERE_13590 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor
D ERE_13540 Uncharacterized protein conserved in bacteria K07402 xdhC; xanthine dehydrogenase accessory factor
D ERE_01910 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
D ERE_16350 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D ERE_15940 Predicted double-stranded RNA/RNA-DNA hybrid binding protein K06993 K06993; ribonuclease H-related protein
D ERE_27490 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC
D ERE_35910 DNA repair proteins K03630 radC; DNA repair protein RadC
D ERE_00800 DNA repair proteins K03630 radC; DNA repair protein RadC
D ERE_30240 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D ERE_04530 Predicted endonuclease containing a URI domain K07461 K07461; putative endonuclease
D ERE_28170 DNA protecting protein DprA K04096 smf; DNA processing protein
D ERE_08280 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 ycaJ; putative ATPase
D ERE_00110 Transposase and inactivated derivatives K07484 K07484; transposase
D ERE_27300 Transposase and inactivated derivatives K07484 K07484; transposase
D ERE_01340 Transposase and inactivated derivatives K07484 K07484; transposase
D ERE_00100 Transposase and inactivated derivatives K07484 K07484; transposase
D ERE_01350 Transposase and inactivated derivatives K07484 K07484; transposase
D ERE_27290 Transposase IS66 family. K07484 K07484; transposase
D ERE_11020 Transposase IS66 family. K07484 K07484; transposase
D ERE_36320 Transposase and inactivated derivatives K07485 K07485; transposase
D ERE_01360 Transposase and inactivated derivatives K07486 K07486; transposase
D ERE_11830 Transposase IS116/IS110/IS902 family./Transposase. K07486 K07486; transposase
D ERE_16870 Transposase IS116/IS110/IS902 family./Transposase. K07486 K07486; transposase
D ERE_22240 Transposase and inactivated derivatives K07486 K07486; transposase
D ERE_35040 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase
D ERE_35030 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase
D ERE_34710 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase
D ERE_35980 Transposase and inactivated derivatives K07496 K07496; putative transposase
D ERE_33500 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase
D ERE_03200 Site-specific recombinase XerD K14059 int; integrase
D ERE_01690 Site-specific recombinase XerD K14059 int; integrase
D ERE_19610 Site-specific recombinase XerD K14059 int; integrase
D ERE_14950 Site-specific recombinase XerD K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D ERE_18770 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E
D ERE_05130 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D ERE_26100 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D ERE_31720 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D ERE_31820 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D ERE_02790 Amino acid transporters K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D ERE_17230 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D ERE_31160 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D ERE_17240 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ERE_13630 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ERE_13790 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ERE_04020 Predicted Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D ERE_08440 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D ERE_27040 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D ERE_21100 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D ERE_30800 Uncharacterized protein conserved in bacteria K06390 spoIIIAA; stage III sporulation protein AA
D ERE_30820 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D ERE_30830 Stage III sporulation protein AC/AD protein family. K06393 spoIIIAD; stage III sporulation protein AD
D ERE_28410 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D ERE_01530 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_01070 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_01540 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_01550 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_19460 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_19470 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_19480 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_16600 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_16610 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_16620 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_17420 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D ERE_17560 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D ERE_20520 Stage V sporulation protein AA. K06403 spoVAA; stage V sporulation protein AA
D ERE_20510 hypothetical protein K06404 spoVAB; stage V sporulation protein AB
D ERE_20260 SpoVA protein. K06405 spoVAC; stage V sporulation protein AC
D ERE_07070 Stage V sporulation protein AD (SpoVAD). K06406 spoVAD; stage V sporulation protein AD
D ERE_07060 SpoVA protein. K06407 spoVAE; stage V sporulation protein AE
D ERE_09290 Glutamyl-tRNA reductase K06410 spoVFA; dipicolinate synthase subunit A
D ERE_09280 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B
D ERE_25010 Uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G
D ERE_35450 Holliday junction resolvasome, helicase subunit K06413 spoVK; stage V sporulation protein K
D ERE_21180 Bacillus/Clostridium GerA spore germination protein. K06310 yndD; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D ERE_04030 Carbon starvation protein, predicted membrane protein K06200 cstA; carbon starvation protein
D ERE_08090 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D ERE_05520 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D ERE_27600 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D ERE_35470 Predicted ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D ERE_14340 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
C 99994 Others
D ERE_11400 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D ERE_22080 Uncharacterized protein involved in copper resistance K06201 cutC; copper homeostasis protein
D ERE_24470 hemerythrin-like metal-binding domain K07216 hr; hemerythrin
D ERE_18660 hemerythrin-like metal-binding domain K07216 hr; hemerythrin
D ERE_18800 hemerythrin-like metal-binding domain K07216 hr; hemerythrin
D ERE_00730 hypothetical protein K26996 sdpI; immunity protein, SdpI family
D ERE_05230 Predicted integral membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D ERE_02610 EMAP domain K06878 K06878; tRNA-binding protein
D ERE_08410 Predicted hydrolase (HAD superfamily) K07025 K07025; putative hydrolase of the HAD superfamily
D ERE_15130 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 K07025; putative hydrolase of the HAD superfamily
D ERE_05630 Predicted membrane protein K07058 K07058; membrane protein
D ERE_12390 X-X-X-Leu-X-X-Gly heptad repeats K01421 yhgE; putative membrane protein
D ERE_06550 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
D ERE_06570 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
C 99997 Function unknown
D ERE_22260 hypothetical protein K06867 K06867; uncharacterized protein
D ERE_01150 Arylsulfatase regulator (Fe-S oxidoreductase) K06871 K06871; uncharacterized protein
D ERE_20900 Hydrolases of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D ERE_26130 Prolyl oligopeptidase family. K06889 K06889; uncharacterized protein
D ERE_25910 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D ERE_31590 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D ERE_05010 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D ERE_11370 Predicted ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein
D ERE_11670 hypothetical protein K06926 K06926; uncharacterized protein
D ERE_04740 Predicted DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein
D ERE_15780 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D ERE_06230 Predicted Zn-dependent protease K06973 K06973; uncharacterized protein
D ERE_12400 Predicted exporters of the RND superfamily K07003 K07003; uncharacterized protein
D ERE_30560 Predicted metal-binding protein related to the C-terminal domain of SecA K07039 K07039; uncharacterized protein
D ERE_33170 Predicted nucleotidyltransferase K07074 K07074; uncharacterized protein
D ERE_20850 Predicted nucleotidyltransferases K07075 K07075; uncharacterized protein
D ERE_28520 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D ERE_24520 Predicted permeases K07090 K07090; uncharacterized protein
D ERE_09310 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D ERE_16310 Predicted phosphoesterases, related to the Icc protein K07096 K07096; uncharacterized protein
D ERE_20800 Predicted small molecule binding protein (contains 3H domain) K07105 K07105; uncharacterized protein
D ERE_28450 Short-chain dehydrogenases of various substrate specificities K07124 K07124; uncharacterized protein
D ERE_20410 Sel1 repeat. K07126 K07126; uncharacterized protein
D ERE_13050 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D ERE_13390 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D ERE_24550 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D ERE_15090 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D ERE_00570 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D ERE_27540 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D ERE_09740 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D ERE_16030 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D ERE_24070 Uncharacterized conserved protein K09117 K09117; uncharacterized protein
D ERE_05530 Uncharacterized conserved protein K09157 K09157; uncharacterized protein
D ERE_08470 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain K09749 K09749; uncharacterized protein
D ERE_27180 Uncharacterized protein conserved in bacteria K09766 K09766; uncharacterized protein
D ERE_14110 Uncharacterized protein conserved in bacteria K09770 K09770; uncharacterized protein
D ERE_15810 Uncharacterized protein conserved in bacteria K09787 K09787; uncharacterized protein
D ERE_22800 Uncharacterized protein conserved in bacteria K00243 K00243; uncharacterized protein
D ERE_18710 Uncharacterized protein conserved in bacteria K09861 K09861; uncharacterized protein
D ERE_04760 Uncharacterized protein conserved in bacteria K09974 K09974; uncharacterized protein
D ERE_26860 DNA polymerase family B, exonuclease domain. K07502 yprB; uncharacterized protein
D ERE_26340 Predicted ribosomal protein K07584 ysxB; uncharacterized protein
D ERE_29570 Predicted nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024