+E Ribosome biogenesis KO
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Ribosome Biogenesis - Candidatus Endomicrobium trichonymphae Rs-D17
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D RSTT_561 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C RSTT_500 conservede GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C RSTT_480 dksA; putative dnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
C RSTT_208 nusA; transcription antitermination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C RSTT_439 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C RSTT_204 nusG; transcription antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D RSTT_719 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RSTT_532 putative N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RSTT_575 gidB; glucose-inhibited cell division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RSTT_154 mraW; SAM-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RSTT_300 tlyA; putative hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D RSTT_652 rimB; 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RSTT_440 conserved Fe-S-cluster redox enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RSTT_300 tlyA; putative hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RSTT_485 trmA; putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RSTT_576 rluA; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C RSTT_482 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C RSTT_019 RimM-like PRC domain protein K02860 rimM; 16S rRNA processing protein RimM
C RSTT_148 conserved MiaB-like hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
B rRNA processing factors
C RSTT_561 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C RSTT_507 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
C RSTT_488 ruvX; putative Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
C RSTT_716 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
B GTPases
C RSTT_124 engA; GTP-binding protein EngA K03977 engA; GTPase
C RSTT_500 conservede GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C RSTT_632 Sua5-related translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C RSTT_210 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C RSTT_207 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C RSTT_353 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
C RSTT_310 conserved membrane-associated hydrolase K07042 ybeY; probable rRNA maturation factor
C RSTT_131 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024