+C RNA KO
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Non-coding RNAs - Escherichia coli O17:K52:H18 UMN026 (ExPEC)
%
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ATransfer RNA
B ECUMN_tRNA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECUMN_tRNA41 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECUMN_tRNA58 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECUMN_tRNA70 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECUMN_tRNA71 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECUMN_tRNA21 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECUMN_tRNA36 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECUMN_tRNA64 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECUMN_tRNA65 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECUMN_tRNA66 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECUMN_tRNA67 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECUMN_tRNA7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECUMN_tRNA17 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECUMN_tRNA18 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECUMN_tRNA19 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECUMN_tRNA72 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECUMN_tRNA3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B ECUMN_tRNA34 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B ECUMN_tRNA4 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B ECUMN_tRNA75 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
B ECUMN_tRNA84 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECUMN_tRNA85 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECUMN_tRNA87 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECUMN_tRNA88 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECUMN_tRNA33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECUMN_tRNA42 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECUMN_tRNA47 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECUMN_tRNA69 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECUMN_tRNA45 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECUMN_tRNA48 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECUMN_tRNA49 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECUMN_tRNA50 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECUMN_tRNA62 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECUMN_tRNA74 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECUMN_tRNA37 tRNA-His K14226 tRNA-His; tRNA His
B ECUMN_tRNA1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B ECUMN_tRNA40 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B ECUMN_tRNA57 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B ECUMN_tRNA38 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA51 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA52 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA53 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA54 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA60 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA76 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA83 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECUMN_tRNA10 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECUMN_tRNA12 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECUMN_tRNA13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECUMN_tRNA14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECUMN_tRNA25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECUMN_tRNA8 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECUMN_tRNA26 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA27 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA28 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA29 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA31 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA61 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA68 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA82 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA86 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECUMN_tRNA30 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B ECUMN_tRNA55 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B ECUMN_tRNA20 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B ECUMN_tRNA39 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B ECUMN_tRNA56 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B ECUMN_tRNA63 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECUMN_tRNA73 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECUMN_tRNA79 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECUMN_tRNA80 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECUMN_tRNA81 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECUMN_tRNA43 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECUMN_tRNA46 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECUMN_tRNA5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECUMN_tRNA59 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECUMN_tRNA35 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
B ECUMN_tRNA44 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B ECUMN_tRNA77 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B ECUMN_tRNA78 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B ECUMN_tRNA11 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECUMN_tRNA15 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECUMN_tRNA16 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECUMN_tRNA22 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECUMN_tRNA23 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECUMN_tRNA24 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECUMN_tRNA9 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECUMN_tRNA32 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
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ARibosomal RNA
B Prokaryotic rRNA
C ECUMN_16S_1 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
C ECUMN_16S_2 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
C ECUMN_16S_3 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
C ECUMN_16S_4 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
C ECUMN_16S_5 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
C ECUMN_16S_6 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
C ECUMN_16S_7 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
C ECUMN_23S_1 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C ECUMN_23S_2 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C ECUMN_23S_3 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C ECUMN_23S_4 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C ECUMN_23S_5 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C ECUMN_23S_6 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C ECUMN_23S_7 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C ECUMN_5S_1 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C ECUMN_5S_2 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C ECUMN_5S_3 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C ECUMN_5S_4 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C ECUMN_5S_5 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C ECUMN_5S_6 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C ECUMN_5S_7 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C ECUMN_5S_8 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
B Eukaryotic rRNA
B Mitochondrial rRNA
B Plastid rRNA
#
AOther prokaryotic RNA
B Basic functional RNA
C ECUMN_misc_RNA_63 rnpB; M1 K01978 rnpB; RNase P catalytic RNA component
C ECUMN_misc_RNA_49 ssrA; TmRNA K15035 ssrA; transfer-messenger RNA
C ECUMN_misc_RNA_55 ssrS; 6S K28358 ssrS; RNA polymerase binding 6S RNA
C ECUMN_misc_RNA_7 ffs; 4.5S K01983 ffs; signal recognition particle 4.5S RNA
B Antisense regulator
C ECUMN_misc_RNA_23 sokB; SokB K18870 sokB; sRNA antisense regulator of MokB and HokB protein
C ECUMN_misc_RNA_2 sokC; SokC K18871 sokC; sRNA antisense regulator of MokC and HokC protein
C ECUMN_misc_RNA_16 rdlB; RdlB K18863 rdlA_B_C_D; sRNA antisense regulator of LdrA/B/C/D protein
C ECUMN_misc_RNA_69 rdlD; RdlD K18863 rdlA_B_C_D; sRNA antisense regulator of LdrA/B/C/D protein
C ECUMN_misc_RNA_70 istR; IstR K18526 istR; sRNA antisense regulator of TisB protein
C ECUMN_misc_RNA_35 ryeC; RyeC K18864 sibA; sRNA antisense regulator of IbsA protein
C ECUMN_misc_RNA_36 rygC; RygC K18864 sibA; sRNA antisense regulator of IbsA protein
C ECUMN_misc_RNA_37 rygD; RygD K18864 sibA; sRNA antisense regulator of IbsA protein
C ECUMN_misc_RNA_38 ryeD; RyeD K18865 sibB; sRNA antisense regulator of IbsB protein
C ECUMN_misc_RNA_56 rygD; RygD K18867 sibC; sRNA antisense regulator of IbsC protein
C ECUMN_misc_RNA_57 rygC; RygC K18867 sibC; sRNA antisense regulator of IbsC protein
C ECUMN_misc_RNA_60 rygD; RygD K18868 sibD; sRNA antisense regulator of IbsD protein
C ECUMN_misc_RNA_61 rygC; RygC K18868 sibD; sRNA antisense regulator of IbsD protein
C ECUMN_misc_RNA_47 ryfC; RyfC K18872 ohsC; sRNA antisense regulator of ShoB protein
C ECUMN_misc_RNA_79 ryjC; RyjC K18524 symR; sRNA antisense regulator of SymE protein
C ECUMN_misc_RNA_28 ryeA; RyeA K28182 ryeA; small antisense RNA RyeA
B Small regulatory RNA
C ECUMN_misc_RNA_33 dsrA; DsrA K18502 dsrA; small regulatory RNA DsrA
C ECUMN_misc_RNA_9 sroB; SroB K18503 chiX; small regulatory RNA ChiX
C ECUMN_misc_RNA_65 ryhA; RyhA K18504 arcZ; small regulatory RNA ArcZ
C ECUMN_misc_RNA_45 tke1; tke1 K15841 glmY; small regulatory RNA GlmY
C ECUMN_misc_RNA_71 ryiA; RyiA K18505 glmZ; small regulatory RNA GlmZ
C ECUMN_misc_RNA_3 sgrS; SgrS K18506 sgrS; small regulatory RNA SgrS
C ECUMN_misc_RNA_67 ryhB; RyhB K18507 ryhB; small regulatory RNA RyhB
C ECUMN_misc_RNA_12 rybB; RybB K18508 rybB; small regulatory RNA RybB
C ECUMN_misc_RNA_22 rydC; RydC K18509 rydC; small regulatory RNA RydC
C ECUMN_misc_RNA_50 micA; MicA K18511 micA; small regulatory RNA MicA
C ECUMN_misc_RNA_21 micC; MicC K18512 micC; small regulatory RNA MicC
C ECUMN_misc_RNA_40 micF; MicF K18513 micF; small regulatory RNA MicF
C ECUMN_misc_RNA_51 csrB; CsrB K18515 csrB; small regulatory RNA CsrB
C ECUMN_misc_RNA_73 csrC; CsrC K18516 csrC; small regulatory RNA CsrC
C ECUMN_misc_RNA_25 dicF; DicF K18517 dicF; small regulatory RNA DicF
C ECUMN_misc_RNA_27 rprA; RprA K18518 rprA; small regulatory RNA RprA
C ECUMN_misc_RNA_34 rseX; RseX K18519 rseX; small regulatory RNA RseX
C ECUMN_misc_RNA_39 ryeE; RyeE K18520 cyaR; small regulatory RNA CyaR
C ECUMN_misc_RNA_52 gcvB; GcvB K18521 gcvB; small regulatory RNA GcvB
C ECUMN_misc_RNA_53 omrA; OmrA K18522 omrA; small regulatory RNA OmrA
C ECUMN_misc_RNA_54 omrB; OmrB K18523 omrB; small regulatory RNA OmrB
C ECUMN_misc_RNA_68 gadY; GadY K18525 gadY; small regulatory RNA GadY
C ECUMN_misc_RNA_72 spf; Spot42 K18527 spf; small regulatory RNA Spot 42
C ECUMN_misc_RNA_74 oxyS; OxyS K18528 oxyS; small regulatory RNA OxyS
C ECUMN_misc_RNA_19 isrA; IsrA K21091 mcaS; small regulatory RNA McaS
C ECUMN_misc_RNA_29 ryeB; RyeB K28181 sdsR; small regulatory RNA SdsR
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ASmall nuclear RNA
B Sm-class snRNA
B Lsm-class snRNA
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ASmall nucleolar RNA
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AOther eukaryotic RNA
B Micro RNA
B Small Cajal body-specific RNA
B Unclassified
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 5, 2025