+E Messenger RNA Biogenesis KO
#
Messenger RNA Biogenesis - Eutrema salsugineum (saltwater cress)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E EUTSA_v10010496mg hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E EUTSA_v10020966mg hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E EUTSA_v10000074mg hypothetical protein K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E EUTSA_v10020216mg hypothetical protein K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E EUTSA_v10005507mg hypothetical protein K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E EUTSA_v10018801mg hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E EUTSA_v10018665mg hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E EUTSA_v10007847mg hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
D Cap binding complex
E EUTSA_v10022549mg hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1
E EUTSA_v10003260mg hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E EUTSA_v10026280mg hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E EUTSA_v10026187mg hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E EUTSA_v10012809mg hypothetical protein K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E EUTSA_v10007191mg hypothetical protein K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E EUTSA_v10028283mg hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E EUTSA_v10020725mg hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E EUTSA_v10016259mg hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E EUTSA_v10028426mg hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E EUTSA_v10018488mg hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E EUTSA_v10012441mg hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E EUTSA_v10003707mg hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E EUTSA_v10024010mg hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E EUTSA_v10013325mg hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E EUTSA_v10007064mg hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E EUTSA_v10012890mg hypothetical protein K15542 PFS2; polyadenylation factor subunit 2
E EUTSA_v10004561mg hypothetical protein K14962 WDR82; COMPASS component SWD2
E EUTSA_v10014091mg hypothetical protein K14962 WDR82; COMPASS component SWD2
E EUTSA_v10023593mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10028803mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10003247mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10021158mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10002613mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10004612mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10016951mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10016946mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10014165mg hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E EUTSA_v10019100mg hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E EUTSA_v10019803mg hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E EUTSA_v10019340mg hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E EUTSA_v10004278mg hypothetical protein K14406 CSTF1; cleavage stimulation factor subunit 1
E EUTSA_v10018490mg hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2
E EUTSA_v10006915mg hypothetical protein K14408 CSTF3; cleavage stimulation factor subunit 3
E EUTSA_v10012442mg hypothetical protein K06100 SYMPK; symplekin
E EUTSA_v10006574mg hypothetical protein K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E EUTSA_v10026002mg hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E EUTSA_v10001000mg hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E EUTSA_v10019312mg hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
E EUTSA_v10009078mg hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
E EUTSA_v10026682mg hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
E EUTSA_v10022941mg hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
E EUTSA_v10026681mg hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
E EUTSA_v10021862mg hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
E EUTSA_v10000406mg hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
E EUTSA_v10003707mg hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E EUTSA_v10024010mg hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E EUTSA_v10018490mg hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2
E EUTSA_v10012442mg hypothetical protein K06100 SYMPK; symplekin
E EUTSA_v10006574mg hypothetical protein K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E EUTSA_v10005155mg hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E EUTSA_v10015347mg hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E EUTSA_v10028382mg hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E EUTSA_v10017893mg hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E EUTSA_v10028481mg hypothetical protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E EUTSA_v10028402mg hypothetical protein K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E EUTSA_v10000146mg hypothetical protein K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E EUTSA_v10010727mg hypothetical protein K22824 WTAP; pre-mRNA-splicing regulator WTAP
E EUTSA_v10010523mg hypothetical protein K22824 WTAP; pre-mRNA-splicing regulator WTAP
E EUTSA_v10026934mg hypothetical protein K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E EUTSA_v10014073mg hypothetical protein K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E EUTSA_v10001908mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E EUTSA_v10024486mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E EUTSA_v10006945mg hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E EUTSA_v10024364mg hypothetical protein K10683 BARD1; BRCA1-associated RING domain protein 1
E EUTSA_v10006912mg hypothetical protein K10683 BARD1; BRCA1-associated RING domain protein 1
E EUTSA_v10003632mg hypothetical protein K13192 RBM26; RNA-binding protein 26
E EUTSA_v10028541mg hypothetical protein K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E EUTSA_v10022661mg hypothetical protein K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E EUTSA_v10001455mg hypothetical protein K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E EUTSA_v10012104mg hypothetical protein K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
C Other processing factors
D EUTSA_v10011527mg hypothetical protein K13102 KIN; DNA/RNA-binding protein KIN17
D EUTSA_v10018901mg hypothetical protein K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D EUTSA_v10001921mg hypothetical protein K27103 SRRT; serrate RNA effector molecule
D EUTSA_v10001919mg hypothetical protein K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E EUTSA_v10011787mg hypothetical protein K12876 RBM8A; RNA-binding protein 8A
E EUTSA_v10009013mg hypothetical protein K12877 MAGOH; protein mago nashi
E EUTSA_v10027861mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10018970mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10014286mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10014531mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10013628mg hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E EUTSA_v10022698mg hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E EUTSA_v10011544mg hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E EUTSA_v10020832mg hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E EUTSA_v10001671mg hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18
E EUTSA_v10007720mg hypothetical protein K13114 PNN; pinin
E EUTSA_v10024660mg hypothetical protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E EUTSA_v10007778mg hypothetical protein K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E EUTSA_v10016250mg hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E EUTSA_v10013059mg hypothetical protein K12878 THOC1; THO complex subunit 1
E EUTSA_v100065400m hypothetical protein K12879 THOC2; THO complex subunit 2
E EUTSA_v10014152mg hypothetical protein K12880 THOC3; THO complex subunit 3
E EUTSA_v10027861mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10018970mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10014286mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10014531mg hypothetical protein K12881 THOC4; THO complex subunit 4
E EUTSA_v10003147mg hypothetical protein K13174 THOC5; THO complex subunit 5
E EUTSA_v10011479mg hypothetical protein K13174 THOC5; THO complex subunit 5
E EUTSA_v10022744mg hypothetical protein K13175 THOC6; THO complex subunit 6
E EUTSA_v10021437mg hypothetical protein K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E EUTSA_v10022707mg hypothetical protein K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E EUTSA_v10022469mg hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E EUTSA_v10005161mg hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor
E EUTSA_v10019892mg hypothetical protein K23719 SAC3; nuclear mRNA export protein SAC3
E EUTSA_v10010422mg hypothetical protein K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E EUTSA_v10017995mg hypothetical protein K09291 TPR; nucleoprotein TPR
E EUTSA_v10018796mg hypothetical protein K14298 RAE1; mRNA export factor
E EUTSA_v10016789mg hypothetical protein K14004 SEC13; protein transport protein SEC13
E EUTSA_v10021223mg hypothetical protein K14004 SEC13; protein transport protein SEC13
E EUTSA_v10024536mg hypothetical protein K14304 NUP85; nuclear pore complex protein Nup85
E EUTSA_v10025548mg hypothetical protein K14305 NUP43; nuclear pore complex protein Nup43
E EUTSA_v10028709mg hypothetical protein K14295 NUP50; nuclear pore complex protein Nup50
E EUTSA_v10008300mg hypothetical protein K14308 NUP54; nuclear pore complex protein Nup54
E EUTSA_v10001339mg hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62
E EUTSA_v10012715mg hypothetical protein K14318 NUP88; nuclear pore complex protein Nup88
E EUTSA_v10005836mg hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93
E EUTSA_v10016231mg hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93
E EUTSA_v10006652mg hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E EUTSA_v10018057mg hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E EUTSA_v10023238mg hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E EUTSA_v10019957mg hypothetical protein K14301 NUP107; nuclear pore complex protein Nup107
E EUTSA_v10003521mg hypothetical protein K14300 NUP133; nuclear pore complex protein Nup133
E EUTSA_v10024188mg hypothetical protein K14311 NUP188; nuclear pore complex protein Nup188
E EUTSA_v10006562mg hypothetical protein K14312 NUP155; nuclear pore complex protein Nup155
E EUTSA_v10006552mg hypothetical protein K14303 NUP160; nuclear pore complex protein Nup160
E EUTSA_v10021095mg hypothetical protein K14313 NUP35; nuclear pore complex protein Nup53
E EUTSA_v10002339mg hypothetical protein K14310 NUP205; nuclear pore complex protein Nup205
E EUTSA_v10027618mg hypothetical protein K14314 NUP210; nuclear pore complex protein Nup210
E EUTSA_v10011181mg hypothetical protein K14317 NUP214; nuclear pore complex protein Nup214
E EUTSA_v10025060mg hypothetical protein K14307 NUPL1; nucleoporin p58/p45
E EUTSA_v10018711mg hypothetical protein K14321 NUPL2; nucleoporin-like protein 2
E EUTSA_v10018404mg hypothetical protein K14315 NDC1; nucleoporin NDC1
E EUTSA_v10023589mg hypothetical protein K14299 SEH1; nucleoporin SEH1
E EUTSA_v10005968mg hypothetical protein K14320 AAAS; aladin
E EUTSA_v10001133mg hypothetical protein K18723 GLE1; nucleoporin GLE1
E EUTSA_v10007079mg hypothetical protein K18723 GLE1; nucleoporin GLE1
D Ran-mediated transport factors
E EUTSA_v10014614mg hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran
E EUTSA_v10014622mg hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran
E EUTSA_v10025495mg hypothetical protein K18726 FAF2; FAS-associated factor 2
E EUTSA_v10028607mg hypothetical protein K18726 FAF2; FAS-associated factor 2
E EUTSA_v10020085mg hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
E EUTSA_v10012714mg hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
E EUTSA_v10000577mg hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
E EUTSA_v10003267mg hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E EUTSA_v10008555mg hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E EUTSA_v10012517mg hypothetical protein K14290 XPO1; exportin-1
E EUTSA_v10019949mg hypothetical protein K14290 XPO1; exportin-1
E EUTSA_v10012516mg hypothetical protein K18460 XPO7; exportin-7
E EUTSA_v10005880mg hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1
E EUTSA_v10013175mg hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E EUTSA_v10004946mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10014598mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10008588mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10026131mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10020824mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E EUTSA_v10011528mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E EUTSA_v10018626mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E EUTSA_v10005736mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E EUTSA_v10012738mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E EUTSA_v10000058mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E EUTSA_v10012457mg hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E EUTSA_v10005841mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E EUTSA_v10016388mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E EUTSA_v10005833mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E EUTSA_v10018369mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10020750mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10018407mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10019472mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10018219mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10010649mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10000075mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10011289mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10009520mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10020474mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10022589mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10024683mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10010069mg hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E EUTSA_v10008886mg hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence
E EUTSA_v10014721mg hypothetical protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E EUTSA_v10008698mg hypothetical protein K14294 WIBG; partner of Y14 and mago
E EUTSA_v10005930mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10011518mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10007978mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10016684mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10021050mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10024023mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10004139mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10025365mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10000891mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10027322mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10025172mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10013607mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10016750mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10020586mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10025462mg hypothetical protein K14411 MSI; RNA-binding protein Musashi
E EUTSA_v10012906mg hypothetical protein K14416 HBS1; elongation factor 1 alpha-like protein
E EUTSA_v10025473mg hypothetical protein K06965 PELO; protein pelota
E EUTSA_v10004890mg hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2
E EUTSA_v10014588mg hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2
E EUTSA_v10014635mg hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2
E EUTSA_v10010317mg hypothetical protein K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E EUTSA_v10003625mg hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
E EUTSA_v10014656mg hypothetical protein K18732 SARNP; SAP domain-containing ribonucleoprotein
E EUTSA_v10017021mg hypothetical protein K21772 PURA; transcriptional activator protein Pur-alpha
E EUTSA_v10016180mg hypothetical protein K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E EUTSA_v10011692mg hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
E EUTSA_v10004248mg hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
E EUTSA_v10004173mg hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
E EUTSA_v10007678mg hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
E EUTSA_v10027757mg hypothetical protein K03267 ERF3; peptide chain release factor subunit 3
E EUTSA_v10007335mg hypothetical protein K03267 ERF3; peptide chain release factor subunit 3
E EUTSA_v10000743mg hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E EUTSA_v10016159mg hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2
E EUTSA_v10007455mg hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E EUTSA_v10006109mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E EUTSA_v10018921mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E EUTSA_v10023605mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E EUTSA_v10016971mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E EUTSA_v10008290mg hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E EUTSA_v10003886mg hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E EUTSA_v10007162mg hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E EUTSA_v10007164mg hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E EUTSA_v10020527mg hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E EUTSA_v10011420mg hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E EUTSA_v10007406mg hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E EUTSA_v10003957mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E EUTSA_v10023407mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E EUTSA_v10003963mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E EUTSA_v10013373mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E EUTSA_v10003178mg hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E EUTSA_v10024939mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10010320mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10004060mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10020593mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10020525mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10004128mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10004020mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10013349mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E EUTSA_v10007450mg hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E EUTSA_v10022517mg hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E EUTSA_v10012551mg hypothetical protein K14409 SMG7; protein SMG7
C Factors involved in mRNA localization
D Cargo complex
E EUTSA_v10020259mg hypothetical protein K14844 PUF6; pumilio homology domain family member 6
E EUTSA_v10006560mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006551mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006411mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10003130mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10023213mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10016137mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10012431mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10001881mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10016129mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10024254mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10024207mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10012475mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10024210mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006545mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006554mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10002033mg hypothetical protein K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E EUTSA_v10001945mg hypothetical protein K13210 FUBP; far upstream element-binding protein
E EUTSA_v10006898mg hypothetical protein K13210 FUBP; far upstream element-binding protein
E EUTSA_v10013526mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E EUTSA_v10007619mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E EUTSA_v10007620mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E EUTSA_v10007618mg hypothetical protein K03231 EEF1A; elongation factor 1-alpha
E EUTSA_v10023493mg hypothetical protein K03233 EEF1G; elongation factor 1-gamma
E EUTSA_v10007759mg hypothetical protein K03233 EEF1G; elongation factor 1-gamma
D Other mRNA localization factors
E EUTSA_v10012457mg hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E EUTSA_v10012933mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10006996mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10004222mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10011323mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10003637mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10020380mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10013173mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10000793mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10027583mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10000090mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
E EUTSA_v10025017mg hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E EUTSA_v10003139mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10016224mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10018068mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10011196mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10016181mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10001902mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10015501mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10006643mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10012624mg hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C
E EUTSA_v10004946mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10014598mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10008588mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10026131mg hypothetical protein K03259 EIF4E; translation initiation factor 4E
E EUTSA_v10000743mg hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E EUTSA_v10005841mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E EUTSA_v10016388mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E EUTSA_v10005833mg hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E EUTSA_v10005922mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E EUTSA_v10028588mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E EUTSA_v10001405mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E EUTSA_v10007133mg hypothetical protein K18749 LSM14; protein LSM14
E EUTSA_v10000836mg hypothetical protein K18749 LSM14; protein LSM14
E EUTSA_v10006684mg hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E EUTSA_v10022538mg hypothetical protein K18752 TNPO1; transportin-1
E EUTSA_v10022517mg hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E EUTSA_v10012551mg hypothetical protein K14409 SMG7; protein SMG7
E EUTSA_v10005930mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10011518mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10007978mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10016684mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10021050mg hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E EUTSA_v10012690mg hypothetical protein K18757 LARP1; la-related protein 1
E EUTSA_v10024905mg hypothetical protein K18757 LARP1; la-related protein 1
D P-body specific factors
E EUTSA_v10014094mg hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E EUTSA_v10007986mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E EUTSA_v10021763mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E EUTSA_v10002864mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E EUTSA_v10009105mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E EUTSA_v10009199mg hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E EUTSA_v10019321mg hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E EUTSA_v10021732mg hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E EUTSA_v10005202mg hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E EUTSA_v10006338mg hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E EUTSA_v10005187mg hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E EUTSA_v10019364mg hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E EUTSA_v10006560mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006551mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006411mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10003130mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10023213mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10016137mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10012431mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10001881mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10016129mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10024254mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10024207mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10012475mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10024210mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006545mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10006554mg hypothetical protein K10357 MYO5; myosin V
E EUTSA_v10011471mg hypothetical protein K07374 TUBA; tubulin alpha
E EUTSA_v10000161mg hypothetical protein K07374 TUBA; tubulin alpha
E EUTSA_v10013521mg hypothetical protein K07374 TUBA; tubulin alpha
E EUTSA_v10013523mg hypothetical protein K07374 TUBA; tubulin alpha
E EUTSA_v10020718mg hypothetical protein K07374 TUBA; tubulin alpha
E EUTSA_v10006521mg hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E EUTSA_v10012986mg hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E EUTSA_v10007092mg hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E EUTSA_v10012672mg hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E EUTSA_v10012563mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E EUTSA_v10012567mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E EUTSA_v10016186mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E EUTSA_v10017643mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10005848mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10005849mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10007841mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10010623mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10018990mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10017059mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10009426mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10008404mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10014297mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10014350mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10008017mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10018051mg hypothetical protein K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E EUTSA_v10020108mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E EUTSA_v10024461mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E EUTSA_v10018148mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E EUTSA_v10006845mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E EUTSA_v10019901mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E EUTSA_v10019903mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E EUTSA_v10016159mg hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2
E EUTSA_v10007455mg hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3
E EUTSA_v10014822mg hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E EUTSA_v10022464mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E EUTSA_v10018432mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E EUTSA_v10007434mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E EUTSA_v10011308mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E EUTSA_v10020281mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
E EUTSA_v10013273mg hypothetical protein K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E EUTSA_v10020804mg hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
E EUTSA_v10011526mg hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
E EUTSA_v10007746mg hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
E EUTSA_v10018369mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10020750mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10018407mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10019472mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10018219mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10010649mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10000075mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10011289mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10009520mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10020474mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10022589mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v10024683mg hypothetical protein K13126 PABPC; polyadenylate-binding protein
E EUTSA_v100055271m hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E EUTSA_v10004460mg hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E EUTSA_v10018413mg hypothetical protein K15026 EIF2A; translation initiation factor 2A
E EUTSA_v10012255mg hypothetical protein K03253 EIF3B; translation initiation factor 3 subunit B
E EUTSA_v10000061mg hypothetical protein K03253 EIF3B; translation initiation factor 3 subunit B
E EUTSA_v10027018mg hypothetical protein K03253 EIF3B; translation initiation factor 3 subunit B
E EUTSA_v10020824mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E EUTSA_v10011528mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E EUTSA_v10018626mg hypothetical protein K03257 EIF4A; translation initiation factor 4A
E EUTSA_v10011544mg hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E EUTSA_v10020832mg hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E EUTSA_v10005736mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E EUTSA_v10012738mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E EUTSA_v10000058mg hypothetical protein K03260 EIF4G; translation initiation factor 4G
E EUTSA_v10011646mg hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E EUTSA_v10021128mg hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E EUTSA_v10008183mg hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E EUTSA_v10013545mg hypothetical protein K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E EUTSA_v10007986mg hypothetical protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E EUTSA_v10014094mg hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E EUTSA_v10005922mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E EUTSA_v10028588mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E EUTSA_v10001405mg hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E EUTSA_v10019901mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E EUTSA_v10019903mg hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4
E EUTSA_v10020108mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E EUTSA_v10024461mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E EUTSA_v10018148mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E EUTSA_v10006845mg hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E EUTSA_v10021763mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E EUTSA_v10002864mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E EUTSA_v10009105mg hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E EUTSA_v10009199mg hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E EUTSA_v10019321mg hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E EUTSA_v10021732mg hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E EUTSA_v10005202mg hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E EUTSA_v10006338mg hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E EUTSA_v10005187mg hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E EUTSA_v10019364mg hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E EUTSA_v10009553mg hypothetical protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E EUTSA_v10018062mg hypothetical protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E EUTSA_v10023239mg hypothetical protein K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
E EUTSA_v10019185mg hypothetical protein K07573 CSL4; exosome complex component CSL4
E EUTSA_v10008200mg hypothetical protein K03679 RRP4; exosome complex component RRP4
E EUTSA_v10026115mg hypothetical protein K03681 RRP40; exosome complex component RRP40
E EUTSA_v10006211mg hypothetical protein K11600 RRP41; exosome complex component RRP41
E EUTSA_v10002814mg hypothetical protein K12590 RRP46; exosome complex component RRP46
E EUTSA_v10002689mg hypothetical protein K12590 RRP46; exosome complex component RRP46
E EUTSA_v10026036mg hypothetical protein K12587 MTR3; exosome complex component MTR3
E EUTSA_v10021262mg hypothetical protein K12589 RRP42; exosome complex component RRP42
E EUTSA_v10023611mg hypothetical protein K12586 RRP43; exosome complex component RRP43
E EUTSA_v10005979mg hypothetical protein K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E EUTSA_v10022534mg hypothetical protein K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E EUTSA_v10003636mg hypothetical protein K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E EUTSA_v100233391m hypothetical protein K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E EUTSA_v10004902mg hypothetical protein K12592 C1D; exosome complex protein LRP1
E EUTSA_v10002686mg hypothetical protein K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E EUTSA_v10014846mg hypothetical protein K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E EUTSA_v10013073mg hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E EUTSA_v10023236mg hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E EUTSA_v10019987mg hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E EUTSA_v10010069mg hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E EUTSA_v10018029mg hypothetical protein K12600 SKI3; superkiller protein 3
E EUTSA_v10027356mg hypothetical protein K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E EUTSA_v10017643mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10005848mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10005849mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10007841mg hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E EUTSA_v10006521mg hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E EUTSA_v10012986mg hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E EUTSA_v10007092mg hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E EUTSA_v10012672mg hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E EUTSA_v10012563mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E EUTSA_v10012567mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E EUTSA_v10016186mg hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E EUTSA_v10010623mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10018990mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10017059mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10009426mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10008404mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10014297mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10014350mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10008017mg hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E EUTSA_v10021160mg hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9
E EUTSA_v10014186mg hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9
E EUTSA_v10003437mg hypothetical protein K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E EUTSA_v10003252mg hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16
E EUTSA_v10014095mg hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16
E EUTSA_v10008378mg hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16
D Pan complex
D Other 3'-5' decay factors
E EUTSA_v10011283mg hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E EUTSA_v10002612mg hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E EUTSA_v10002449mg hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E EUTSA_v10000752mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E EUTSA_v10011191mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E EUTSA_v10012492mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E EUTSA_v10016179mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E EUTSA_v10006566mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E EUTSA_v10016152mg hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E EUTSA_v10019937mg hypothetical protein K26109 NRDE2; nuclear exosome regulator NRDE2
E EUTSA_v10003508mg hypothetical protein K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E EUTSA_v10002092mg hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E EUTSA_v10018478mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E EUTSA_v10016594mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E EUTSA_v10010378mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E EUTSA_v10010379mg hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E EUTSA_v10020014mg hypothetical protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E EUTSA_v10012572mg hypothetical protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E EUTSA_v10024824mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E EUTSA_v10000117mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E EUTSA_v10003971mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E EUTSA_v10024871mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E EUTSA_v10000886mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E EUTSA_v10025143mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E EUTSA_v10025029mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E EUTSA_v10013372mg hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E EUTSA_v10012864mg hypothetical protein K04043 dnaK; molecular chaperone DnaK
E EUTSA_v10012866mg hypothetical protein K04043 dnaK; molecular chaperone DnaK
E EUTSA_v10024591mg hypothetical protein K04043 dnaK; molecular chaperone DnaK
E EUTSA_v10020386mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E EUTSA_v10011330mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E EUTSA_v10013030mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E EUTSA_v10020346mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E EUTSA_v10016425mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E EUTSA_v10016427mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E EUTSA_v10007125mg hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E EUTSA_v10008200mg hypothetical protein K03679 RRP4; exosome complex component RRP4
E EUTSA_v10019185mg hypothetical protein K07573 CSL4; exosome complex component CSL4
D Cofactors
E EUTSA_v10006211mg hypothetical protein K11600 RRP41; exosome complex component RRP41
E EUTSA_v10021262mg hypothetical protein K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024