+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Euzebya pacifica
%
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ACRISPR-Cas system
B Universal Cas proteins
C DVS28_b0138 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C DVS28_b0139 CRISPR-associated protein, Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D DVS28_b0132 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D DVS28_b0133 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D DVS28_b0135 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D DVS28_b0136 CRISPR-associated protein, Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D DVS28_b0137 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D DVS28_b0083 Methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DVS28_b0522 Methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DVS28_b0521 Adenine-specific methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DVS28_a1244 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_a1245 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_b0120 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_b0440 Modification methylase HphIA K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_b0171 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_b0515 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_b0543 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_b0554 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DVS28_b0300 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
C DVS28_a2073 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
C DVS28_a2074 Type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D DVS28_a4298 Death on curing protein, Doc toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D DVS28_a0313 putative growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D DVS28_a1459 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
C YafQ-dinJ
C YoeB-YefM
D DVS28_a1458 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K19159 yefM; antitoxin YefM
C HipA-HipB
D DVS28_a2099 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
D DVS28_a0435 hypothetical protein K03973 pspC; phage shock protein C
D DVS28_a3293 hypothetical protein K03973 pspC; phage shock protein C
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
D DVS28_a1207 Death on curing protein, Doc toxin K07341 doc; death on curing protein
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D DVS28_a4564 Antitoxin 1 K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D DVS28_a2948 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DVS28_a1291 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DVS28_a1516 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DVS28_a3482 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C DVS28_a3668 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C DVS28_a2284 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C DVS28_a0336 DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023