+D GENES KO
#
KEGG Orthology (KO) - Ferrimonas lipolytica
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:fes00010]
D HER31_00360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HER31_00030 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HER31_11535 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HER31_02910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HER31_06945 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_06955 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_11540 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HER31_01675 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HER31_05010 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HER31_15995 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HER31_00740 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HER31_07050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HER31_05740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HER31_17615 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HER31_17620 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_01755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HER31_07350 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HER31_02790 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D HER31_10550 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HER31_11255 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D HER31_05655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HER31_11690 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HER31_04175 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HER31_08200 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D HER31_16755 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HER31_08335 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HER31_11210 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:fes00020]
D HER31_03315 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HER31_17640 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HER31_07165 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HER31_09230 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D HER31_03340 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HER31_03345 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_03355 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HER31_03350 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HER31_03330 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HER31_03335 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HER31_03320 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HER31_03325 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HER31_17875 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17880 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17870 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D HER31_12130 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4]
D HER31_05800 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HER31_13690 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HER31_16755 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HER31_17615 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HER31_17620 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:fes00030]
D HER31_00360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HER31_07040 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HER31_07035 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D HER31_10170 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HER31_17400 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HER31_00570 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HER31_00365 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HER31_01265 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HER31_08635 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D HER31_03010 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HER31_09650 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HER31_03020 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HER31_04175 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HER31_09450 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HER31_07030 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D HER31_07025 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HER31_11535 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HER31_00030 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:fes00040]
D HER31_10845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HER31_09675 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HER31_10550 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HER31_17400 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:fes00051]
D HER31_01795 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HER31_17045 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HER31_17040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HER31_03770 HAD-IIB family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D HER31_00030 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HER31_11535 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HER31_02910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HER31_17635 hxpB; hexitol phosphatase HxpB K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:fes00052]
D HER31_11690 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HER31_10705 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HER31_18365 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HER31_09675 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HER31_04175 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00053 Ascorbate and aldarate metabolism [PATH:fes00053]
D HER31_10845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HER31_10550 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HER31_16515 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:fes00500]
D HER31_03780 alpha-amylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D HER31_09675 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HER31_08335 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HER31_04175 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HER31_00360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HER31_01795 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:fes00520]
D HER31_02975 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HER31_08335 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HER31_02980 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HER31_01795 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HER31_15835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HER31_01790 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HER31_15820 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HER31_12375 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D HER31_06890 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D HER31_13495 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D HER31_13490 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D HER31_13845 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HER31_16895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HER31_10790 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D HER31_10795 polyhydroxyalkanoate biosynthesis repressor PhaR K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D HER31_10785 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HER31_10780 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D HER31_10800 acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D HER31_11210 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HER31_04175 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HER31_09675 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HER31_10845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HER31_10705 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HER31_18365 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HER31_16515 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HER31_00360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HER31_17045 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HER31_17040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:fes00620]
D HER31_05655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HER31_17615 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HER31_17620 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_02555 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HER31_07350 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HER31_01570 aldehyde dehydrogenase EutE K04021 eutE; aldehyde dehydrogenase
D HER31_02790 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D HER31_01755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HER31_10550 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HER31_02540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HER31_02535 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HER31_01590 phosphate acetyltransferase K04020 eutD; phosphotransacetylase
D HER31_07050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HER31_11105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HER31_17895 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HER31_17890 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HER31_10000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HER31_03215 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HER31_11255 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D HER31_06405 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D HER31_07330 FAD-binding oxidoreductase K18930 dld; D-lactate dehydrogenase
D HER31_08855 FAD-binding oxidoreductase K18930 dld; D-lactate dehydrogenase
D HER31_07215 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HER31_03405 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HER31_08065 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HER31_09205 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HER31_05770 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HER31_14285 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D HER31_13690 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HER31_05800 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HER31_17875 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17880 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17870 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D HER31_12130 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4]
D HER31_17310 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HER31_16755 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HER31_05740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HER31_09080 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_15025 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:fes00630]
D HER31_09075 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D HER31_05655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HER31_09080 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D HER31_13690 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HER31_03315 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HER31_17640 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_12465 catalase K03781 katE; catalase [EC:1.11.1.6]
D HER31_13475 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HER31_17405 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HER31_03565 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HER31_14750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D HER31_16250 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HER31_12120 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HER31_12610 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HER31_12620 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_12615 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HER31_03620 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D HER31_03415 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HER31_07025 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HER31_14515 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HER31_16225 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HER31_06000 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HER31_14510 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HER31_16220 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HER31_14505 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D HER31_16215 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D HER31_11570 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:fes00640]
D HER31_05655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HER31_01205 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D HER31_02540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HER31_02535 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HER31_04195 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HER31_04200 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HER31_04205 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_02555 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HER31_08730 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_11105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HER31_17895 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HER31_17890 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HER31_10000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HER31_03350 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HER31_03355 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HER31_11360 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HER31_14940 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D HER31_14945 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D HER31_14950 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D HER31_17640 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HER31_14935 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D HER31_12410 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:fes00650]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_02240 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HER31_07350 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HER31_03330 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HER31_03335 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HER31_03320 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HER31_03325 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HER31_17875 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17880 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17870 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D HER31_12130 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4]
D HER31_02555 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HER31_01170 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HER31_01155 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D HER31_01150 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D HER31_14815 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HER31_14810 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:fes00660]
D HER31_14815 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HER31_14810 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D HER31_03350 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HER31_03355 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HER31_15015 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HER31_15010 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HER31_15020 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:fes00562]
D HER31_08985 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HER31_11360 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HER31_02910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:fes00190]
D HER31_17995 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HER31_03330 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HER31_03335 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HER31_03320 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HER31_03325 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HER31_17875 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17880 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17870 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D HER31_13810 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HER31_13805 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HER31_13800 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HER31_16690 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HER31_16665 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D HER31_16655 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D HER31_16650 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D HER31_16660 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D HER31_16685 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HER31_06705 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D HER31_06710 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D HER31_06715 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D HER31_09565 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HER31_09560 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HER31_09555 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D HER31_15795 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HER31_15805 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HER31_15800 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HER31_15790 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HER31_15810 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HER31_15775 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HER31_15785 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HER31_15780 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HER31_00025 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D HER31_06245 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D HER31_09130 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HER31_09085 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:fes00710]
D HER31_11540 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HER31_06945 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_06955 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_11535 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HER31_00030 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HER31_00570 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HER31_01265 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HER31_13600 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D HER31_02910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HER31_17400 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HER31_00365 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HER31_17310 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HER31_16755 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HER31_14285 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D HER31_13690 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:fes00720]
D HER31_05740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HER31_17310 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HER31_13690 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HER31_05800 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HER31_03330 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HER31_03335 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HER31_03320 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HER31_03325 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HER31_17875 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17880 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D HER31_17870 succinate dehydrogenase/fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D HER31_12130 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4]
D HER31_03355 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HER31_03350 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_07165 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HER31_17640 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HER31_11105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HER31_17895 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HER31_17890 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HER31_10000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HER31_04640 fdhF; formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D HER31_03380 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HER31_09950 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HER31_14250 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HER31_02535 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HER31_02540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HER31_05655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:fes00680]
D HER31_01755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HER31_01750 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D HER31_14515 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HER31_16225 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HER31_06000 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HER31_14510 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HER31_16220 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HER31_14505 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D HER31_16215 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D HER31_04640 fdhF; formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D HER31_12120 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HER31_14750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D HER31_13475 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HER31_00740 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HER31_17310 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HER31_13690 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HER31_11535 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HER31_00030 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HER31_02540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HER31_02535 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HER31_05655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HER31_05740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HER31_01675 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HER31_05010 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HER31_15995 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HER31_01245 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HER31_06875 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HER31_03035 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:fes00910]
D HER31_18250 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D HER31_18245 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D HER31_18240 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D HER31_11580 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D HER31_06135 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D HER31_08440 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D HER31_11575 nitrate reductase cytochrome c-type subunit; periplasmic nitrate reductase electron transfer subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D HER31_06130 nitrate reductase cytochrome c-type subunit; periplasmic nitrate reductase electron transfer subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D HER31_08445 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D HER31_12825 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D HER31_12835 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D HER31_12840 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D HER31_13675 nrfA; ammonia-forming cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D HER31_01295 ammonia-forming cytochrome c nitrite reductase subunit c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D HER31_05330 nrfA; ammonia-forming cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D HER31_06195 ammonia-forming cytochrome c nitrite reductase subunit c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D HER31_09715 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D HER31_06615 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HER31_16250 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HER31_18705 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HER31_18700 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HER31_03970 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:fes00920]
D HER31_01770 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HER31_01765 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HER31_01780 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D HER31_16835 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HER31_18630 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D HER31_18620 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D HER31_18625 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D HER31_12320 phsA; thiosulfate reductase PhsA K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D HER31_15175 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HER31_16535 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D HER31_03815 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HER31_05190 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HER31_08325 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HER31_11370 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HER31_14260 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HER31_14690 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_14710 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_15965 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_02070 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_04940 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_04955 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_04980 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_14685 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_14705 4Fe-4S binding protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_15970 4Fe-4S dicluster domain-containing protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_02075 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_04935 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_04950 4Fe-4S binding protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_04975 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_11205 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D HER31_06830 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:fes00061]
D HER31_11105 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HER31_17895 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HER31_17890 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HER31_10000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HER31_03610 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HER31_03600 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HER31_03595 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HER31_08210 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HER31_10025 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HER31_03615 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HER31_11340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HER31_03605 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HER31_06660 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HER31_11130 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HER31_02240 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HER31_10640 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_13280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_15885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_16300 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_03075 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07570 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07580 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:fes00071]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_15660 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_10235 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_18560 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HER31_10590 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D HER31_04295 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D HER31_10640 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_13280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_15885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_16300 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_03075 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07570 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07580 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_01755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HER31_07350 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HER31_02790 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:fes00561]
D HER31_03415 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HER31_10550 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HER31_15485 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HER31_16635 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HER31_03590 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HER31_13125 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HER31_13190 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HER31_00655 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
C 00564 Glycerophospholipid metabolism [PATH:fes00564]
D HER31_16010 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HER31_16635 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HER31_13125 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HER31_13190 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HER31_11405 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D HER31_16050 alpha/beta fold hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D HER31_18070 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HER31_01555 ethanolamine ammonia-lyase reactivating factor EutA K04019 eutA; ethanolamine utilization protein EutA
D HER31_01550 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D HER31_01545 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D HER31_11160 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HER31_06815 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HER31_18080 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HER31_05265 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HER31_12080 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D HER31_03930 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D HER31_14225 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:fes00565]
D HER31_11405 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D HER31_11405 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D HER31_11405 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:fes00592]
D HER31_11405 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D HER31_15660 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_10235 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:fes01040]
D HER31_16845 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D HER31_02465 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HER31_01220 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:fes00230]
D HER31_13230 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HER31_16830 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D HER31_03020 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HER31_04175 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HER31_09450 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HER31_09980 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HER31_17735 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HER31_08610 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HER31_09600 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HER31_08605 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HER31_15575 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HER31_13285 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HER31_07185 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HER31_17740 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HER31_02740 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HER31_04125 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HER31_09455 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HER31_00765 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HER31_08645 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HER31_09750 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D HER31_03025 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HER31_00065 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HER31_00050 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HER31_08870 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HER31_08930 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HER31_13400 yjjX; inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D HER31_01670 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HER31_08865 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HER31_15690 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D HER31_16325 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HER31_06895 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HER31_06900 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HER31_06035 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HER31_04130 deoxyguanosinetriphosphate triphosphohydrolase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D HER31_11835 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HER31_04135 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HER31_16315 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HER31_14455 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HER31_09135 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HER31_00725 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D HER31_11450 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D HER31_11825 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D HER31_15070 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D HER31_18175 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HER31_01120 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D HER31_07720 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D HER31_09175 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D HER31_13940 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D HER31_13445 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HER31_18345 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HER31_18350 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HER31_09810 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HER31_00730 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HER31_13220 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D HER31_13525 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D HER31_01780 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D HER31_01770 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HER31_01765 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:fes00240]
D HER31_02875 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HER31_02870 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HER31_08715 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HER31_08720 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HER31_05575 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HER31_06620 pyrD; quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D HER31_16390 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HER31_06835 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HER31_11175 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HER31_08930 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HER31_00730 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HER31_14000 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HER31_12990 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D HER31_00735 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HER31_06860 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HER31_06495 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HER31_04125 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HER31_09455 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HER31_00765 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HER31_08645 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HER31_13360 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D HER31_08600 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HER31_13445 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HER31_18345 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HER31_18350 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HER31_17660 winged helix-turn-helix transcriptional regulator K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D HER31_17665 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D HER31_16335 rihA; pyrimidine-specific ribonucleoside hydrolase RihA K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
D HER31_09175 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D HER31_03625 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HER31_06035 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HER31_06500 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HER31_06895 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HER31_06900 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HER31_11835 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HER31_04135 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D HER31_06515 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HER31_16400 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HER31_03015 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D HER31_11030 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HER31_11800 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:fes00250]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_11770 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HER31_06930 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HER31_03805 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HER31_00125 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HER31_08660 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HER31_04140 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HER31_14750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D HER31_07085 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HER31_17330 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HER31_17335 argH; argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D HER31_18175 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HER31_07185 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HER31_08370 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15]
D HER31_08715 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HER31_08720 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HER31_18705 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HER31_18700 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HER31_06615 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HER31_13090 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HER31_16250 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HER31_02875 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HER31_02870 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HER31_01645 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HER31_15835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HER31_09980 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:fes00260]
D HER31_00115 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_00830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_12010 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HER31_14255 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HER31_10015 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HER31_12005 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HER31_12000 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HER31_10695 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D HER31_12120 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HER31_14750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D HER31_13475 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HER31_03415 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HER31_01675 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HER31_05010 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HER31_15995 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HER31_01245 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HER31_06875 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HER31_03035 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HER31_16525 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HER31_16530 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D HER31_12610 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HER31_12620 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_12615 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HER31_06815 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HER31_13385 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HER31_02705 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HER31_14795 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HER31_02600 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HER31_02605 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:fes00270]
D HER31_03815 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HER31_05190 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HER31_08325 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HER31_11505 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HER31_05585 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HER31_10835 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HER31_00560 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HER31_18650 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HER31_00065 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HER31_15895 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D HER31_02300 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D HER31_06560 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D HER31_10480 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HER31_01015 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HER31_00115 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_00830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_12010 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HER31_14255 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HER31_10015 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HER31_11370 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HER31_14260 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HER31_08665 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D HER31_14805 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HER31_00890 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HER31_15170 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HER31_00535 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_15175 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HER31_13690 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HER31_13385 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HER31_02705 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HER31_01245 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HER31_06875 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:fes00280]
D HER31_14805 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HER31_07200 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HER31_04195 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HER31_04200 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HER31_04205 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_18560 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HER31_01190 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_15660 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_10235 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_11345 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D HER31_11360 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HER31_01175 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D HER31_01185 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D HER31_01180 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D HER31_01170 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HER31_01155 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D HER31_01150 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:fes00290]
D HER31_14795 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HER31_15015 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HER31_15010 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HER31_15020 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HER31_14815 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HER31_14810 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D HER31_14820 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HER31_14800 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HER31_14805 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HER31_07200 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HER31_04140 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HER31_15025 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:fes00300]
D HER31_00115 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_00830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_12010 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HER31_14255 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HER31_10015 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HER31_08490 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HER31_02865 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HER31_11200 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HER31_13575 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HER31_08345 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HER31_15090 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HER31_15085 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HER31_17470 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HER31_17475 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:fes00310]
D HER31_03345 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:fes00220]
D HER31_17325 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HER31_17330 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HER31_17335 argH; argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D HER31_01645 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HER31_16250 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HER31_02875 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HER31_02870 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HER31_06615 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_04140 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HER31_17320 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D HER31_17315 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D HER31_13575 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:fes00330]
D HER31_13580 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D HER31_02685 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D HER31_13585 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D HER31_04190 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D HER31_01695 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HER31_13090 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HER31_11310 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HER31_11305 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:fes00340]
D HER31_07610 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HER31_07645 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D HER31_07635 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D HER31_07630 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HER31_07640 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HER31_07625 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D HER31_06870 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_07620 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_07615 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D HER31_08370 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15]
C 00350 Tyrosine metabolism [PATH:fes00350]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_06870 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_07620 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_02320 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HER31_07335 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D HER31_02330 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D HER31_02325 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D HER31_01755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HER31_07350 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HER31_02790 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D HER31_11695 2-dehydro-3-deoxyglucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
C 00360 Phenylalanine metabolism [PATH:fes00360]
D HER31_02305 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_06870 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_07620 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_02320 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
C 00380 Tryptophan metabolism [PATH:fes00380]
D HER31_14230 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3]
D HER31_03345 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_12465 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:fes00400]
D HER31_00630 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HER31_00940 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HER31_05730 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HER31_02630 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HER31_17375 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HER31_17900 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HER31_15560 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HER31_17370 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HER31_06865 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HER31_10200 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HER31_02625 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HER31_02620 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HER31_02615 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D HER31_02610 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D HER31_02600 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HER31_02605 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HER31_00635 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D HER31_00680 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_06870 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_07620 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_02305 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:fes00410]
D HER31_12740 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D HER31_12735 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_11360 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:fes00430]
D HER31_02505 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_05895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_07085 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HER31_06615 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HER31_02535 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HER31_02540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:fes00450]
D HER31_14260 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HER31_11505 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HER31_05585 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HER31_10835 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HER31_02300 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D HER31_13410 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HER31_07090 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HER31_01770 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HER31_01765 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HER31_18500 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HER31_04665 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HER31_06485 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:fes00460]
D HER31_02505 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_05895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_06930 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HER31_03805 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HER31_00125 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HER31_12120 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:fes00470]
D HER31_10765 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HER31_13330 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HER31_17505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HER31_01645 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HER31_16870 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HER31_17485 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HER31_15090 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HER31_15085 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:fes00480]
D HER31_02505 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_05895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_09765 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HER31_09760 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D HER31_00890 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HER31_15170 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HER31_00535 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HER31_11320 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HER31_18430 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HER31_12700 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D HER31_06585 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HER31_11325 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HER31_12550 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HER31_14965 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HER31_01480 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HER31_15410 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D HER31_07165 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HER31_10170 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HER31_07040 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HER31_01260 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D HER31_06655 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:fes00540]
D HER31_11125 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HER31_17525 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HER31_11135 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HER31_09965 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HER31_11120 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HER31_03275 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HER31_13885 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HER31_09405 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HER31_13890 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HER31_03285 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HER31_16510 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HER31_13040 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HER31_16505 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D HER31_16490 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HER31_13035 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HER31_08170 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HER31_16445 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D HER31_16450 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D HER31_16465 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:fes00542]
D HER31_10725 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:fes00541]
D HER31_09675 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HER31_10705 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HER31_18365 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HER31_10845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HER31_16515 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HER31_17045 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HER31_17040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HER31_15820 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HER31_10785 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HER31_10780 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D HER31_10790 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D HER31_10795 polyhydroxyalkanoate biosynthesis repressor PhaR K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
C 00550 Peptidoglycan biosynthesis [PATH:fes00550]
D HER31_13845 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HER31_16895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HER31_17500 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HER31_17485 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HER31_17470 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HER31_17505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HER31_17475 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HER31_11165 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HER31_13110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HER31_14360 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HER31_17480 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HER31_17495 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HER31_17340 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HER31_12680 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HER31_08620 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HER31_12200 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HER31_17465 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HER31_12220 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HER31_06820 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:fes00552]
D HER31_13110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HER31_14360 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HER31_10725 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:fes00543]
D HER31_17050 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D HER31_10725 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HER31_10745 WecB/TagA/CpsF family glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D HER31_03815 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HER31_17020 WecB/TagA/CpsF family glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252]
D HER31_17025 glycosyltransferase family 2 protein K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:fes00730]
D HER31_08970 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HER31_00930 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HER31_00905 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HER31_12085 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HER31_18085 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HER31_06030 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HER31_04025 phosphotransferase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D HER31_09810 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:fes00740]
D HER31_12100 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HER31_12110 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HER31_15130 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D HER31_12095 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HER31_12105 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HER31_06355 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HER31_00395 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HER31_14490 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D HER31_13230 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HER31_00045 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:fes00750]
D HER31_03960 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D HER31_07690 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HER31_11545 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D HER31_10020 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D HER31_06875 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HER31_13510 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D HER31_11720 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D HER31_12000 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:fes00760]
D HER31_11770 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HER31_04210 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D HER31_17590 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D HER31_03025 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HER31_04125 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HER31_09455 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HER31_00765 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HER31_08645 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D HER31_12185 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HER31_00730 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HER31_00455 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HER31_03470 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HER31_02805 nadK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HER31_18610 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HER31_18615 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HER31_18605 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:fes00770]
D HER31_14815 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HER31_14810 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D HER31_14820 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HER31_14800 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HER31_12730 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D HER31_00945 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HER31_03885 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HER31_12735 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HER31_16905 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D HER31_16405 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HER31_00730 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HER31_16440 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HER31_17565 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HER31_11715 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HER31_09070 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D HER31_14805 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HER31_12740 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:fes00780]
D HER31_03490 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D HER31_10025 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HER31_03615 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HER31_11340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HER31_03605 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HER31_11130 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HER31_16725 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D HER31_03485 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HER31_03475 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HER31_03495 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HER31_03480 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D HER31_16900 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:fes00785]
D HER31_12230 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D HER31_12235 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_17615 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HER31_17620 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HER31_03340 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HER31_03345 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HER31_04195 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HER31_04200 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HER31_04205 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HER31_12610 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HER31_12620 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HER31_12615 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:fes00790]
D HER31_07325 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HER31_00100 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D HER31_06030 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HER31_13120 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HER31_12725 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HER31_13115 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HER31_02905 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HER31_13535 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HER31_09995 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HER31_12100 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HER31_13560 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D HER31_07445 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D HER31_06505 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D HER31_02485 folX; dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D HER31_03525 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HER31_02310 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D HER31_02305 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D HER31_06365 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D HER31_03520 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HER31_05185 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HER31_11265 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HER31_01390 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D HER31_14590 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HER31_16165 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HER31_16155 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HER31_16145 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HER31_16160 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HER31_14585 bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HER31_16120 moeA; molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HER31_08365 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D HER31_14580 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:fes00670]
D HER31_13535 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HER31_03380 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HER31_09950 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HER31_12120 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HER31_08610 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HER31_17740 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HER31_15605 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HER31_12620 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HER31_10835 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HER31_11800 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HER31_11570 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HER31_14250 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HER31_12665 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:fes00860]
D HER31_02350 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HER31_09430 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D HER31_18460 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HER31_14425 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HER31_15065 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D HER31_15060 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D HER31_17650 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D HER31_15565 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D HER31_16065 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D HER31_15625 hemG; menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D HER31_15635 hemG; menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D HER31_09805 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D HER31_05060 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D HER31_15055 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HER31_12830 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HER31_18735 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HER31_09030 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D HER31_16690 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HER31_16685 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HER31_05045 cobalamin biosynthesis protein CbiK K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D HER31_05030 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D HER31_05055 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D HER31_05035 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D HER31_05015 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D HER31_05025 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D HER31_05020 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D HER31_04810 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D HER31_10825 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HER31_04820 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HER31_04805 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HER31_18645 hypothetical protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HER31_05000 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HER31_05005 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D HER31_04780 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HER31_04790 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HER31_04815 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D HER31_04795 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D HER31_01595 eutT; ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D HER31_04515 heme utilization protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D HER31_18055 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:fes00130]
D HER31_16550 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D HER31_14500 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HER31_14485 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D HER31_00045 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HER31_12625 FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D HER31_06885 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D HER31_12630 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D HER31_14385 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D HER31_03135 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D HER31_15490 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D HER31_15495 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D HER31_15500 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D HER31_15510 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D HER31_15515 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D HER31_00345 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D HER31_00585 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D HER31_01210 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D HER31_15315 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D HER31_02320 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:fes00900]
D HER31_00905 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HER31_11155 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HER31_00750 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HER31_09440 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HER31_00755 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D HER31_08905 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HER31_00415 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_00045 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HER31_07365 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D HER31_00910 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HER31_13555 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HER31_11165 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:fes00903]
D HER31_00660 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:fes00907]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_01170 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HER31_15660 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_10235 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HER31_00570 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D HER31_03295 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D HER31_15490 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HER31_04235 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:fes00332]
D HER31_11310 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HER31_11305 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:fes00261]
D HER31_01770 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HER31_01765 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HER31_00115 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_00830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HER31_12010 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HER31_14255 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D HER31_10015 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HER31_08490 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HER31_02865 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:fes00521]
D HER31_04175 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HER31_08985 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:fes00401]
D HER31_00635 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_06870 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_07620 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HER31_02625 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HER31_02620 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HER31_03600 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HER31_11340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HER31_03605 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HER31_03610 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:fes00999]
D HER31_00560 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HER31_15560 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:fes00362]
D HER31_15660 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_10235 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_12125 adenylosuccinate lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D HER31_08945 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:fes00627]
D HER31_03460 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-]
D HER31_03215 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HER31_00045 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:fes00625]
D HER31_08305 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D HER31_02790 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D HER31_01755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HER31_07350 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HER31_01930 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D HER31_02155 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:fes00361]
D HER31_08305 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D HER31_01930 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D HER31_02155 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:fes00633]
D HER31_17985 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D HER31_15660 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HER31_10235 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:fes00643]
D HER31_07335 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D HER31_02330 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D HER31_02325 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:fes00930]
D HER31_00660 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D HER31_10550 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HER31_15655 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HER31_10595 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HER31_10230 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:fes00626]
D HER31_02790 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D HER31_01755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HER31_07350 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:fes03020]
D HER31_16965 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HER31_16970 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HER31_17200 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HER31_16320 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:fes03010]
D HER31_06855 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HER31_11185 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HER31_17105 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HER31_17195 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HER31_17160 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HER31_18200 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HER31_16980 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HER31_17145 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HER31_13815 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HER31_17070 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HER31_17190 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HER31_16975 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HER31_17185 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HER31_17140 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HER31_02955 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HER31_00610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HER31_17120 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HER31_18210 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HER31_17095 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HER31_00385 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HER31_13135 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HER31_16950 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HER31_17090 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HER31_17075 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HER31_17080 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HER31_17135 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HER31_17150 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HER31_16960 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HER31_18215 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HER31_16955 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HER31_16945 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HER31_13820 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HER31_17125 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HER31_17170 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HER31_17110 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HER31_17205 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HER31_17155 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HER31_00625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HER31_06390 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HER31_13550 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HER31_17100 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HER31_17085 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HER31_17130 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HER31_03785 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HER31_09460 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D HER31_13545 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HER31_16415 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HER31_17115 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HER31_17165 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HER31_14295 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HER31_03585 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HER31_16420 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HER31_15720 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HER31_06385 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HER31_17180 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HER31_17270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HER31_08150 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HER31_00085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HER31_15865 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:fes00970]
D HER31_02355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_08155 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_13770 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_15535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_02410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_02445 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_00845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_14635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_10445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_09940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_05115 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05135 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05145 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05155 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05165 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_08025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08030 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08035 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08140 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_13340 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_16890 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_05275 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HER31_05290 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HER31_05305 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HER31_09445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09490 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09515 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_02360 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02380 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02390 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02400 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02415 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02425 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02435 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_00240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_05270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_05285 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_05300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18105 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_16920 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_09935 tRNA-His K14226 tRNA-His; tRNA His
D HER31_14630 tRNA-His K14226 tRNA-His; tRNA His
D HER31_08160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HER31_13775 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HER31_15540 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HER31_05280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_05295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_05310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_09485 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_09505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_09525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_18340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_18395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00515 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_02920 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_05410 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05420 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05425 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05430 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05435 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05455 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05530 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_02925 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05095 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05100 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05105 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05110 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05120 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05130 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05140 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05150 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05160 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_09480 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_09500 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_09520 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_12910 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HER31_01500 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_01505 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_01510 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_01515 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_18720 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_18725 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_18730 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_09945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_06170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_06265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_06275 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_07295 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_07305 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_00840 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_06280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_04065 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_04220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_13740 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_16910 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_15520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_16925 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_12305 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HER31_12350 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HER31_05200 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05205 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05210 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05215 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05220 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_16915 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_02365 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02375 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02385 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02395 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02405 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02420 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02430 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02440 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02455 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_04660 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HER31_02350 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HER31_03455 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HER31_00825 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HER31_05950 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HER31_07480 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HER31_15680 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HER31_15685 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HER31_06375 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HER31_07055 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HER31_04665 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HER31_09955 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HER31_06485 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HER31_15605 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HER31_18440 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HER31_12170 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HER31_00400 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HER31_11415 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HER31_14305 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HER31_11085 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HER31_08900 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HER31_07665 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HER31_07660 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HER31_12365 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HER31_17410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:fes03060]
D HER31_17175 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HER31_16935 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HER31_02915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HER31_09045 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HER31_09040 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HER31_09050 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HER31_15735 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HER31_17540 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HER31_16005 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HER31_00605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HER31_15930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HER31_14400 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D HER31_14405 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D HER31_14410 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D HER31_11740 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HER31_00405 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:fes04122]
D HER31_08970 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HER31_15175 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HER31_15665 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HER31_06150 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HER31_06155 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HER31_06160 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HER31_06145 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HER31_07175 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HER31_16145 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HER31_14590 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HER31_16165 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HER31_16150 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D HER31_16125 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HER31_16155 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HER31_16160 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HER31_00930 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:fes03018]
D HER31_11815 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HER31_03555 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HER31_14460 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HER31_00740 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HER31_02960 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HER31_11590 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_01290 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_06200 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_09720 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_18185 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HER31_01475 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HER31_12815 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HER31_15035 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HER31_14470 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HER31_02835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HER31_17970 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HER31_18150 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HER31_09130 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HER31_09085 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D HER31_12720 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:fes03030]
D HER31_14660 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08050 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_09830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_11110 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HER31_02745 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HER31_06520 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HER31_12180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HER31_12245 hypothetical protein K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HER31_18435 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HER31_15710 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HER31_13335 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HER31_13145 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HER31_14185 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HER31_07345 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HER31_08055 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HER31_11115 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HER31_16095 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HER31_08275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:fes03410]
D HER31_04425 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HER31_11905 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HER31_01630 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HER31_16435 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HER31_04040 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HER31_15675 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HER31_02580 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HER31_11910 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HER31_16095 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HER31_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HER31_08275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:fes03420]
D HER31_03225 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HER31_14200 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HER31_05170 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D HER31_05260 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D HER31_15135 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HER31_04700 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HER31_16095 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HER31_08275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:fes03430]
D HER31_00785 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HER31_18140 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HER31_11820 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D HER31_15135 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HER31_04700 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HER31_03630 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HER31_08875 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HER31_00915 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HER31_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HER31_14185 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HER31_11110 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HER31_15710 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HER31_02745 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HER31_12180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HER31_06520 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HER31_14660 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08050 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_09830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_18435 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HER31_12245 hypothetical protein K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HER31_08275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HER31_17385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:fes03440]
D HER31_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HER31_14185 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HER31_15705 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HER31_11725 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HER31_02755 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HER31_00790 recA; recombinase RecA K03553 recA; recombination protein RecA
D HER31_16095 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HER31_05960 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HER31_05965 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HER31_05955 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HER31_16295 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HER31_08395 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HER31_08400 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HER31_08390 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HER31_11110 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HER31_15710 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HER31_02745 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HER31_12180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HER31_06520 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HER31_14660 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08050 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_09830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_18435 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HER31_12245 hypothetical protein K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HER31_14300 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HER31_18205 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D HER31_10110 prepilin peptidase K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:fes03250]
D HER31_00975 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:fes02010]
D HER31_14565 solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D HER31_14570 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D HER31_14575 energy-coupling factor ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D HER31_18250 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D HER31_18245 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D HER31_18240 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D HER31_14745 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HER31_14675 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D HER31_14670 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HER31_13715 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HER31_13710 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D HER31_13705 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HER31_06785 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HER31_06780 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D HER31_06775 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D HER31_06770 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HER31_13860 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D HER31_13865 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HER31_13870 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HER31_13855 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D HER31_13875 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HER31_05675 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HER31_05685 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D HER31_05690 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HER31_05680 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HER31_09655 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HER31_09660 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D HER31_09665 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HER31_09670 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HER31_04080 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_06175 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_09140 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_04085 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D HER31_06180 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D HER31_09125 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D HER31_04090 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HER31_06185 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HER31_09120 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HER31_04095 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HER31_06190 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HER31_09115 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HER31_03195 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HER31_07740 PhnD/SsuA/transferrin family substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HER31_03185 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D HER31_03190 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HER31_12845 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HER31_12850 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D HER31_12855 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HER31_03090 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HER31_03080 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D HER31_03085 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D HER31_03070 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HER31_03095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HER31_08185 metQ; methionine ABC transporter substrate-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D HER31_08180 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HER31_08175 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D HER31_13320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HER31_13315 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HER31_13310 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HER31_13305 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HER31_13300 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HER31_02265 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D HER31_02260 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D HER31_02255 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D HER31_02250 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D HER31_02245 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D HER31_04785 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D HER31_04825 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D HER31_06230 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D HER31_09355 zinc ABC transporter solute-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HER31_09365 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D HER31_09360 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HER31_10655 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D HER31_18520 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HER31_18515 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HER31_18510 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HER31_08075 ABC transporter permease K09696 natB; sodium transport system permease protein
D HER31_08080 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D HER31_03235 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HER31_03245 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HER31_03240 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HER31_17220 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D HER31_17225 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D HER31_17230 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HER31_17235 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HER31_18425 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D HER31_18420 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D HER31_13905 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HER31_00335 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D HER31_00330 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D HER31_15940 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HER31_15935 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HER31_03270 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HER31_07430 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HER31_07435 ATP-binding cassette domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HER31_06235 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D HER31_14600 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D HER31_07100 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HER31_07095 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:fes02060]
D HER31_08330 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D HER31_08335 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HER31_11210 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HER31_11810 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HER31_13930 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D HER31_13920 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:fes03070]
D HER31_13235 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HER31_16775 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D HER31_16770 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D HER31_16785 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D HER31_16790 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D HER31_16795 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D HER31_16800 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D HER31_16805 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D HER31_16810 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D HER31_16815 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D HER31_16820 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D HER31_16780 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HER31_09045 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HER31_09040 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HER31_16935 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HER31_02915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HER31_17175 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HER31_09050 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HER31_15735 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HER31_17540 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HER31_15930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HER31_16005 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HER31_00605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HER31_14400 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D HER31_14405 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D HER31_14410 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:fes02020]
D HER31_09145 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HER31_09150 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HER31_06030 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HER31_04080 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_06175 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_09140 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_07750 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HER31_07745 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HER31_16750 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HER31_16745 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HER31_15155 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HER31_15150 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HER31_12255 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HER31_12260 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D HER31_11490 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D HER31_16565 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D HER31_16570 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D HER31_11025 flagellin K02406 fliC; flagellin
D HER31_07880 Lateral flagellin K02406 fliC; flagellin
D HER31_10895 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HER31_07850 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HER31_00920 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D HER31_07845 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HER31_00110 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D HER31_16685 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HER31_15715 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HER31_05770 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HER31_08080 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D HER31_08075 ABC transporter permease K09696 natB; sodium transport system permease protein
D HER31_13670 hypothetical protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D HER31_13665 response regulator transcription factor K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D HER31_11070 hypothetical protein K06080 rcsF; RcsF protein
D HER31_00715 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HER31_05255 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D HER31_00835 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D HER31_00215 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HER31_11195 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D HER31_00460 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D HER31_16240 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HER31_16235 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HER31_16250 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HER31_04875 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_13910 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HER31_17585 pilin K02650 pilA; type IV pilus assembly protein PilA
D HER31_05850 cybH; Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D HER31_10405 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HER31_13530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_14325 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_03365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_14245 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D HER31_10855 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HER31_10860 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HER31_10880 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HER31_10890 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HER31_10875 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HER31_10410 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HER31_12325 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D HER31_08825 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D HER31_12330 response regulator transcription factor K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D HER31_11000 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D HER31_10995 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D HER31_10990 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_07925 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_13595 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HER31_01645 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D HER31_03205 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HER31_03200 response regulator K15012 regA; two-component system, response regulator RegA
D HER31_13810 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HER31_13805 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HER31_13800 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HER31_06705 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D HER31_06710 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D HER31_06715 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D HER31_09565 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HER31_09560 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HER31_09555 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D HER31_13235 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HER31_10810 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D HER31_05505 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D HER31_03540 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D HER31_10785 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HER31_10780 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D HER31_03900 helix-turn-helix transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D HER31_07885 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HER31_10420 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D HER31_13810 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:fes02024]
D HER31_01015 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HER31_18150 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HER31_02625 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HER31_02620 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HER31_00630 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HER31_00940 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HER31_05730 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HER31_03090 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HER31_03080 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D HER31_03085 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D HER31_03070 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HER31_03095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HER31_03900 helix-turn-helix transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D HER31_14595 tandem-95 repeat protein K20276 bapA; large repetitive protein
D HER31_10640 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_13280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_15885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_16300 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_03075 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07570 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07580 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_13595 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HER31_12110 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HER31_18370 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D HER31_01090 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_05795 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_13320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HER31_13315 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HER31_13310 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HER31_13305 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HER31_13300 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HER31_05075 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HER31_07130 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HER31_05065 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HER31_07135 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HER31_05070 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HER31_07140 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HER31_05080 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HER31_07145 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HER31_05085 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HER31_15735 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HER31_16935 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HER31_02915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HER31_17175 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HER31_09050 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HER31_17540 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HER31_15930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HER31_16005 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HER31_00605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:fes02030]
D HER31_13530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_14325 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_03365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_14245 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D HER31_09655 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HER31_10880 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HER31_10855 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HER31_10860 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HER31_10890 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HER31_10885 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HER31_10875 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HER31_10410 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HER31_10405 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HER31_10975 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HER31_07910 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HER31_10945 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HER31_10940 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07830 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07950 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D HER31_00920 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D HER31_07845 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HER31_00925 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HER31_07840 OmpA family protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:fes02040]
D HER31_10985 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HER31_07920 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HER31_10980 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HER31_07915 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HER31_10975 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HER31_07910 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HER31_10970 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HER31_07905 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D HER31_10965 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HER31_07900 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HER31_10960 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D HER31_07860 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D HER31_10950 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HER31_16545 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HER31_07855 hypothetical protein K02415 fliL; flagellar protein FliL
D HER31_10945 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HER31_10940 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07830 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07950 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D HER31_10935 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HER31_10930 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HER31_07955 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HER31_10925 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HER31_07960 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HER31_10920 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HER31_07965 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HER31_10910 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HER31_07975 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HER31_10915 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HER31_07970 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HER31_07825 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HER31_10415 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HER31_07820 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HER31_10400 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HER31_07815 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HER31_10395 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HER31_07810 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HER31_10390 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HER31_07805 flgE; flagellar basal body protein FlgE K02390 flgE; flagellar hook protein FlgE
D HER31_10385 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HER31_07800 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HER31_10380 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HER31_07795 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HER31_10375 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HER31_07790 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HER31_10370 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HER31_07785 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HER31_10365 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HER31_07780 peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D HER31_10360 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HER31_07775 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HER31_10355 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HER31_07770 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HER31_10350 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HER31_10430 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP
D HER31_18180 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D HER31_05570 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D HER31_07930 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D HER31_11025 flagellin K02406 fliC; flagellin
D HER31_07880 Lateral flagellin K02406 fliC; flagellin
D HER31_11015 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HER31_07875 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HER31_11005 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HER31_07870 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HER31_00920 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D HER31_07845 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HER31_00925 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HER31_07840 OmpA family protein K02557 motB; chemotaxis protein MotB
D HER31_07885 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HER31_10420 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HER31_10425 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HER31_07890 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HER31_13150 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HER31_11000 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D HER31_13910 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HER31_10990 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_07925 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_10895 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HER31_07850 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HER31_00740 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D HER31_10835 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:fes01501]
D HER31_00970 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HER31_02975 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HER31_13320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HER31_13315 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HER31_13310 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HER31_13305 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HER31_13300 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HER31_14785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05815 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_08480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_14780 multidrug efflux protein K18138 acrB; multidrug efflux pump
D HER31_05790 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_08475 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_05810 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_01090 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_05795 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_13235 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HER31_17340 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HER31_12200 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HER31_17465 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HER31_06325 MBL fold metallo-hydrolase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:fes01502]
D HER31_17505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HER31_10765 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HER31_13330 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HER31_17475 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HER31_17480 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HER31_17495 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:fes01503]
D HER31_07750 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HER31_07745 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HER31_02265 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D HER31_02260 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D HER31_02255 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D HER31_02250 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D HER31_02245 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D HER31_15155 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HER31_15150 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HER31_18135 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HER31_06005 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D HER31_14980 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HER31_00975 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HER31_14785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05815 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_08480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_14780 multidrug efflux protein K18138 acrB; multidrug efflux pump
D HER31_05790 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_08475 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_05810 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_13235 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HER31_11125 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:fes01000]
C 01001 Protein kinases [BR:fes01001]
D HER31_06255 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HER31_12755 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D HER31_17065 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D HER31_09145 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HER31_07750 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HER31_16750 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HER31_15155 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HER31_12255 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HER31_13670 hypothetical protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D HER31_00715 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HER31_09005 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HER31_16240 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HER31_14555 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D HER31_05485 GHKL domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D HER31_10880 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HER31_12325 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D HER31_08825 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D HER31_10995 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D HER31_03205 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HER31_12745 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D HER31_13440 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D HER31_07425 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:fes01009]
D HER31_09820 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HER31_18685 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D HER31_03035 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:fes01002]
D HER31_00405 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HER31_17570 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HER31_05855 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D HER31_04630 hycI; hydrogenase maturation peptidase HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D HER31_08865 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HER31_09980 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HER31_18705 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HER31_15835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HER31_08660 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HER31_10685 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D HER31_06005 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D HER31_06585 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HER31_05360 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D HER31_15400 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D HER31_18550 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D HER31_17815 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HER31_03940 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HER31_15350 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HER31_15355 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HER31_00885 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HER31_11320 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HER31_18430 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HER31_12700 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D HER31_08345 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HER31_03865 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HER31_08630 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HER31_11325 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HER31_05645 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HER31_11190 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HER31_15650 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D HER31_12635 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HER31_06330 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D HER31_02900 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HER31_03505 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HER31_08520 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D HER31_11150 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HER31_13835 DegQ family serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D HER31_13840 degS; outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D HER31_00130 S8 family serine peptidase K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D HER31_05370 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D HER31_12220 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HER31_06820 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HER31_09925 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HER31_05990 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HER31_09915 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HER31_06665 AAA family ATPase K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D HER31_16640 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HER31_11740 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HER31_15985 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HER31_06575 prc; carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HER31_04235 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D HER31_06925 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D HER31_02675 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D HER31_03500 pepE; dipeptidase PepE K05995 pepE; dipeptidase E [EC:3.4.13.21]
D HER31_16540 glpG; rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D HER31_14330 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D HER31_03805 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HER31_02505 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_05895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HER31_11275 tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HER31_12970 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HER31_11295 hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D HER31_11290 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D HER31_13950 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D HER31_13980 tldD; metalloprotease TldD K03568 tldD; TldD protein
D HER31_18165 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D HER31_18160 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:fes01003]
D HER31_08620 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HER31_12680 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HER31_17340 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HER31_10745 WecB/TagA/CpsF family glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D HER31_10725 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HER31_17020 WecB/TagA/CpsF family glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252]
D HER31_17025 glycosyltransferase family 2 protein K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-]
D HER31_03775 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:fes01005]
D HER31_11125 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HER31_11120 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HER31_17525 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HER31_11135 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HER31_09965 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HER31_03275 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HER31_13040 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HER31_16510 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HER31_16505 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D HER31_09405 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HER31_03285 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HER31_13890 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HER31_13885 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HER31_16470 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D HER31_16450 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D HER31_16465 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D HER31_16500 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D HER31_16490 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HER31_08170 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HER31_13035 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HER31_16445 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D HER31_03170 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D HER31_10725 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:fes01011]
D HER31_13845 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HER31_16895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HER31_17500 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HER31_17485 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HER31_17470 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HER31_17505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HER31_10765 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HER31_13330 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HER31_16870 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HER31_17480 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HER31_17495 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HER31_13110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HER31_14360 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HER31_00390 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HER31_17340 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HER31_12680 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HER31_08620 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HER31_12200 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HER31_17465 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HER31_12220 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HER31_06820 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HER31_06005 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D HER31_05645 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HER31_03655 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HER31_12210 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D HER31_07545 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D HER31_16020 DUF3393 domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D HER31_16595 transglycosylase SLT domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D HER31_08070 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D HER31_09605 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D HER31_06510 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HER31_12215 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HER31_18135 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HER31_17600 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D HER31_06010 hypothetical protein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:fes01004]
D HER31_03600 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HER31_03595 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HER31_08210 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HER31_10025 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HER31_03615 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HER31_11340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HER31_03605 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HER31_06660 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HER31_11130 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HER31_02240 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HER31_02465 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HER31_01220 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HER31_16845 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D HER31_05655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HER31_01205 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D HER31_10640 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_13280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_15885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_16300 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_03075 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07570 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07580 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_16635 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HER31_03590 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HER31_13125 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HER31_13190 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:fes01008]
D HER31_03295 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
C 01006 Prenyltransferases [BR:fes01006]
D HER31_00910 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HER31_13555 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HER31_11165 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HER31_18145 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HER31_01210 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D HER31_14500 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HER31_16690 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:fes01007]
D HER31_02350 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HER31_03455 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HER31_12715 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HER31_12365 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HER31_17410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HER31_09955 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HER31_14305 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HER31_06485 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HER31_00400 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HER31_18440 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HER31_12170 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HER31_11415 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HER31_05950 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HER31_07480 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HER31_08900 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HER31_15680 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HER31_15685 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HER31_07055 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HER31_11085 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HER31_06375 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HER31_00825 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HER31_07665 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HER31_07660 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HER31_06790 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HER31_04140 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HER31_06870 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_07620 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HER31_16525 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D HER31_03485 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HER31_11505 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HER31_05585 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HER31_13575 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HER31_03475 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HER31_18460 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HER31_14805 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HER31_14750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D HER31_06875 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:fes00194]
D HER31_15810 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HER31_15805 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HER31_15800 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HER31_15795 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HER31_15790 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HER31_15785 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HER31_15780 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HER31_15775 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HER31_15770 hypothetical protein K02116 atpI; ATP synthase protein I
D HER31_17655 hypothetical protein K05383 cpeT; CpeT protein
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:fes03000]
D HER31_10480 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HER31_01965 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D HER31_04040 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HER31_09265 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HER31_11785 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D HER31_11830 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HER31_02700 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D HER31_05755 dsdC; DNA-binding transcriptional regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D HER31_06965 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D HER31_09645 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HER31_11710 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D HER31_07525 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D HER31_10490 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HER31_17610 pdhR; pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HER31_16395 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HER31_01940 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D HER31_02190 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D HER31_08545 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D HER31_06100 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D HER31_09540 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D HER31_16850 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D HER31_00120 asnC; transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D HER31_15475 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HER31_00170 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HER31_07080 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HER31_03900 helix-turn-helix transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D HER31_00200 response regulator transcription factor K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D HER31_04350 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HER31_17745 zntR; Zn(2+)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D HER31_03465 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HER31_13595 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HER31_06745 FNR family transcription factor K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D HER31_08975 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D HER31_00875 nsrR; nitric oxide-sensing transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D HER31_16345 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HER31_15430 metalloregulator ArsR/SmtB family transcription factor K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D HER31_15630 helix-turn-helix transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D HER31_07045 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D HER31_16900 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HER31_17855 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HER31_00700 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D HER31_12865 helix-turn-helix transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D HER31_08000 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HER31_11000 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D HER31_10150 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D HER31_07125 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D HER31_14265 metJ; met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D HER31_13090 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HER31_04905 FMN-binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D HER31_00995 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D HER31_15765 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HER31_11565 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D HER31_13695 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D HER31_02315 tyrR; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D HER31_08495 ACT domain-containing protein K03567 gcvR; glycine cleavage system transcriptional repressor
D HER31_02270 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D HER31_02285 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D HER31_09880 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D HER31_12710 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HER31_12115 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HER31_17450 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:fes03021]
D HER31_17200 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HER31_16965 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HER31_16970 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HER31_16320 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HER31_13150 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HER31_10675 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D HER31_00780 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D HER31_03680 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D HER31_07290 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D HER31_11765 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HER31_11845 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HER31_01405 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HER31_01490 sigZ; RNA polymerase sigma factor SigZ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HER31_10275 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HER31_15945 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D HER31_13910 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HER31_10895 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HER31_07850 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HER31_13460 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D HER31_02935 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HER31_12090 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HER31_16940 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HER31_13795 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D HER31_13790 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D HER31_12755 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D HER31_12760 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
D HER31_12765 STAS domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR
D HER31_11760 anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D HER31_11755 MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D HER31_11750 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D HER31_12710 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HER31_02880 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D HER31_16740 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D HER31_14470 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:fes03019]
D HER31_03555 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HER31_13995 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HER31_11735 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HER31_18185 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HER31_18090 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HER31_14460 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HER31_11590 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_01290 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_06200 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_09720 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HER31_01475 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HER31_12815 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HER31_15035 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HER31_00740 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HER31_02960 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HER31_14470 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HER31_02835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HER31_17970 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HER31_18150 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HER31_09130 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HER31_09085 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D HER31_12720 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HER31_11815 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HER31_00835 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D HER31_14105 EAL domain-containing protein K18765 csrD; RNase E specificity factor CsrD
D HER31_14370 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D HER31_08100 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A
D HER31_13185 rraB; ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D HER31_13925 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D HER31_07320 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D HER31_12685 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:fes03011]
D HER31_06855 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HER31_11185 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HER31_17105 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HER31_17195 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HER31_17160 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HER31_18200 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HER31_16980 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HER31_17145 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HER31_13815 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HER31_17070 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HER31_17190 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HER31_16975 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HER31_17185 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HER31_17140 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HER31_02955 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HER31_00610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HER31_17120 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HER31_18210 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HER31_17095 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HER31_00385 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HER31_13135 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HER31_16950 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HER31_17090 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HER31_17075 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HER31_17080 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HER31_17135 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HER31_17150 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HER31_18215 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HER31_16955 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HER31_16945 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HER31_16960 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HER31_13820 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HER31_17125 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HER31_17170 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HER31_17110 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HER31_17205 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HER31_17155 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HER31_00625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HER31_06390 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HER31_13550 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HER31_17100 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HER31_17085 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HER31_17130 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HER31_13545 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HER31_16415 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HER31_17115 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HER31_17165 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HER31_14295 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HER31_03585 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HER31_16420 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HER31_15720 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HER31_06385 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HER31_17180 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HER31_03785 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HER31_09460 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D HER31_15865 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HER31_17270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HER31_08150 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HER31_00085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:fes03009]
D HER31_11735 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HER31_18090 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HER31_11730 GTPase Era K03595 era; GTPase
D HER31_13540 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HER31_12710 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HER31_02935 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HER31_12090 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HER31_16940 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HER31_11550 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HER31_00180 rsuA; 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HER31_13515 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HER31_15610 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HER31_00520 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HER31_15925 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HER31_00540 rsmE; 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HER31_06535 rsmF; 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D HER31_15755 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HER31_17455 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HER31_17435 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HER31_15390 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D HER31_18190 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HER31_02895 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D HER31_00985 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D HER31_12195 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HER31_02495 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HER31_05615 methyltransferase domain-containing protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HER31_08355 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D HER31_06630 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D HER31_09250 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D HER31_08920 trmG_rlmN; bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HER31_00720 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HER31_16140 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HER31_00135 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HER31_02655 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HER31_03560 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HER31_00060 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HER31_07170 rluE; 23S rRNA pseudouridine(2457) synthase RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D HER31_16265 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D HER31_12240 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HER31_07360 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D HER31_00615 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D HER31_05355 hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D HER31_17865 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HER31_10205 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D HER31_07190 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D HER31_03555 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HER31_13995 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HER31_09875 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HER31_10345 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D HER31_01475 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HER31_11520 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D HER31_18085 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HER31_08885 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HER31_04180 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D HER31_18155 hflX; GTPase HflX K03665 hflX; GTPase
D HER31_15570 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HER31_16315 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HER31_02945 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D HER31_02930 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D HER31_17790 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D HER31_12190 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D HER31_03120 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D HER31_02890 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D HER31_03675 YibL family ribosome-associated protein K14762 yibL; ribosome-associated protein
D HER31_13955 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D HER31_06650 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D HER31_13915 hpf; ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D HER31_00685 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A
D HER31_09470 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D HER31_03580 yceD; 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:fes03016]
D HER31_13105 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HER31_02350 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HER31_11085 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HER31_00400 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HER31_12170 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HER31_06485 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HER31_03455 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HER31_14305 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HER31_11415 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HER31_05950 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HER31_00825 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HER31_07480 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HER31_06375 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HER31_07055 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HER31_09955 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HER31_18440 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HER31_08900 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HER31_07665 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HER31_07660 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HER31_12365 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HER31_17410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HER31_16285 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HER31_03985 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HER31_01635 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HER31_11075 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D HER31_10005 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HER31_02950 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HER31_08970 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HER31_15570 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HER31_18145 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HER31_15740 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HER31_15750 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HER31_18500 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HER31_16835 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HER31_15725 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HER31_05565 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D HER31_16385 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HER31_13470 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D HER31_07575 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HER31_12690 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D HER31_12145 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D HER31_15680 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HER31_15685 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HER31_12715 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HER31_08675 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HER31_01485 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D HER31_09610 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HER31_13275 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D HER31_17860 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HER31_02720 tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D HER31_03130 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HER31_05940 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D HER31_05935 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D HER31_05620 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D HER31_12015 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D HER31_16865 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D HER31_00620 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HER31_16305 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D HER31_08980 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D HER31_15180 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HER31_11515 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D HER31_11220 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D HER31_07240 hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D HER31_16140 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HER31_00135 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HER31_07175 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HER31_06755 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D HER31_15665 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HER31_06150 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HER31_06155 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HER31_06160 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HER31_06145 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HER31_08960 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D HER31_11380 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D HER31_09970 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D HER31_10030 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D HER31_09060 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HER31_05185 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HER31_03525 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HER31_03520 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HER31_11265 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HER31_11860 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D HER31_16840 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D HER31_09055 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HER31_00930 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HER31_11100 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HER31_07600 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HER31_13130 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HER31_18130 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HER31_13420 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D HER31_18185 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HER31_02960 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:fes03012]
D HER31_09885 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D HER31_02940 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HER31_06380 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HER31_13630 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HER31_11180 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HER31_16930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HER31_16990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HER31_15195 elongation factor G K02355 fusA; elongation factor G
D HER31_16985 fusA; elongation factor G K02355 fusA; elongation factor G
D HER31_08615 elongation factor G K02355 fusA; elongation factor G
D HER31_04670 GTP-binding protein K03833 selB; selenocysteine-specific elongation factor
D HER31_09425 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HER31_11170 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HER31_09420 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HER31_09465 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HER31_07120 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HER31_18025 efp; elongation factor P K02356 efp; elongation factor P
D HER31_09640 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P
D HER31_18030 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D HER31_18020 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D HER31_11420 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HER31_02985 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D HER31_17905 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:fes03110]
D HER31_07150 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D HER31_00070 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HER31_09920 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HER31_14335 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D HER31_09820 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HER31_02835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HER31_08950 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D HER31_04225 yegD; molecular chaperone K04046 yegD; hypothetical chaperone protein
D HER31_17970 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HER31_02840 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HER31_13485 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D HER31_08955 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D HER31_16760 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D HER31_02810 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HER31_01275 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D HER31_16765 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D HER31_17965 co-chaperone GroES K04078 groES; chaperonin GroES
D HER31_02900 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HER31_15775 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HER31_00215 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HER31_16005 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HER31_15145 spheroplast protein y K06006 cpxP; periplasmic protein CpxP/Spy
D HER31_13250 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D HER31_04675 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D HER31_05880 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D HER31_05885 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D HER31_14680 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D HER31_15975 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D HER31_02080 dmsD; Tat proofreading chaperone DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D HER31_04945 molecular chaperone K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D HER31_00130 S8 family serine peptidase K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D HER31_00975 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HER31_09960 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HER31_09905 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D HER31_00270 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D HER31_00300 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D HER31_01450 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D HER31_02860 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D HER31_00410 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D HER31_12025 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D HER31_03250 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D HER31_13505 surA; peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D HER31_14465 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D HER31_09815 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D HER31_05545 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1
D HER31_02845 glutaredoxin family protein K03676 grxC; glutaredoxin 3
D HER31_07500 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D HER31_14980 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HER31_07535 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D HER31_11480 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HER31_17945 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D HER31_17255 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:fes04131]
D HER31_08930 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HER31_08850 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D HER31_06945 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_06955 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_07050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HER31_09820 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HER31_05780 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:fes03051]
D HER31_09820 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:fes03032]
D HER31_07345 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HER31_08055 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HER31_10480 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HER31_03765 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D HER31_09910 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HER31_07655 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HER31_09015 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HER31_06850 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D HER31_15715 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HER31_13335 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HER31_13145 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HER31_14185 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HER31_11110 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HER31_15710 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HER31_18435 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HER31_12180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HER31_06520 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HER31_14660 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08050 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_09830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_02745 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HER31_12245 hypothetical protein K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HER31_11115 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HER31_16095 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HER31_08275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HER31_06240 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D HER31_17385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HER31_04170 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D HER31_08580 hda; DnaA inactivator Hda K10763 hda; DnaA-homolog protein
D HER31_06880 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HER31_15700 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HER31_13200 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HER31_13210 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HER31_02690 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HER31_07710 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:fes03036]
D HER31_10480 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HER31_11735 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HER31_11055 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D HER31_03765 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D HER31_09910 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HER31_07655 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HER31_09015 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HER31_06850 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D HER31_15715 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HER31_17420 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D HER31_17855 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HER31_18150 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HER31_15475 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HER31_00170 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HER31_07080 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HER31_04260 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D HER31_08285 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D HER31_02645 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D HER31_02650 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D HER31_17515 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HER31_00745 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D HER31_15935 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HER31_17465 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HER31_07075 DUF87 domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HER31_17460 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D HER31_17510 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D HER31_17490 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D HER31_15940 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HER31_17520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HER31_08280 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D HER31_12645 cell division protein ZapA K09888 zapA; cell division protein ZapA
D HER31_14970 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D HER31_06625 cell division protein ZapC K18657 zapC; cell division protein ZapC
D HER31_17560 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D HER31_13825 cell division protein ZapE K06916 zapE; cell division protein ZapE
D HER31_18135 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HER31_14785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05815 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_08480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_07555 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D HER31_07560 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HER31_07565 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HER31_16645 hypothetical protein K13053 sulA; cell division inhibitor SulA
D HER31_16395 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HER31_04170 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D HER31_14015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HER31_14010 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HER31_14005 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D HER31_12205 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D HER31_10865 ParA family protein K03496 parA; chromosome partitioning protein
D HER31_12070 ParA family protein K03496 parA; chromosome partitioning protein
D HER31_15760 ParA family protein K03496 parA; chromosome partitioning protein
D HER31_15765 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HER31_13200 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HER31_13210 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HER31_15750 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HER31_15755 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HER31_15100 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HER31_11485 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D HER31_06490 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HER31_16090 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:fes03400]
D HER31_04045 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HER31_08110 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D HER31_11905 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HER31_01630 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HER31_04425 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HER31_17545 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HER31_05320 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HER31_16400 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HER31_04040 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HER31_15675 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HER31_16435 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HER31_02580 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HER31_11910 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HER31_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HER31_08275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HER31_16095 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HER31_14200 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HER31_05170 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D HER31_05260 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D HER31_15135 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HER31_04700 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HER31_16965 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HER31_16970 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HER31_17200 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HER31_16320 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HER31_03225 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HER31_00785 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HER31_18140 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HER31_11820 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D HER31_03630 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HER31_08875 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HER31_00915 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HER31_11110 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HER31_15710 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HER31_18435 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HER31_12180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HER31_06520 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HER31_14660 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08050 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_08225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_09830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HER31_02745 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HER31_12245 hypothetical protein K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HER31_14185 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HER31_17385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HER31_08395 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HER31_08400 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HER31_08390 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HER31_00790 recA; recombinase RecA K03553 recA; recombination protein RecA
D HER31_05960 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HER31_05965 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HER31_05955 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HER31_14300 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HER31_18205 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D HER31_10110 prepilin peptidase K04067 priC; primosomal replication protein N''
D HER31_09870 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D HER31_09865 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D HER31_03045 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HER31_15705 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HER31_16295 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HER31_11725 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HER31_02755 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HER31_02795 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HER31_09160 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D HER31_02045 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HER31_05550 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD
D HER31_06880 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HER31_15700 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HER31_02690 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HER31_03765 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D HER31_09910 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HER31_17855 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HER31_07655 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HER31_09015 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HER31_06850 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D HER31_12815 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HER31_15035 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HER31_11055 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D HER31_01060 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HER31_16640 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HER31_10095 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D HER31_04325 DNA polymerase Y family protein K14161 imuB; protein ImuB
D HER31_04330 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D HER31_00795 regulatory protein RecX K03565 recX; regulatory protein
D HER31_14640 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D HER31_02760 UvrD-helicase domain-containing protein K03658 helD; DNA helicase IV [EC:5.6.2.4]
D HER31_07605 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HER31_10100 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HER31_06895 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HER31_06900 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:fes03029]
D HER31_13805 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HER31_02940 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HER31_06380 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HER31_11180 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HER31_16930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HER31_16990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HER31_15195 elongation factor G K02355 fusA; elongation factor G
D HER31_16985 fusA; elongation factor G K02355 fusA; elongation factor G
D HER31_08615 elongation factor G K02355 fusA; elongation factor G
D HER31_11730 GTPase Era K03595 era; GTPase
D HER31_12365 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HER31_12170 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HER31_05950 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HER31_14305 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HER31_14185 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HER31_11145 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D HER31_02835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HER31_02810 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HER31_17970 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HER31_17965 co-chaperone GroES K04078 groES; chaperonin GroES
D HER31_02840 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HER31_08970 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HER31_08955 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D HER31_07500 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D HER31_06490 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HER31_16690 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HER31_16660 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D HER31_16685 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HER31_15735 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HER31_16675 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D HER31_16695 SCO family protein K07152 SCO1; protein SCO1
D HER31_09820 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:fes02000]
D HER31_03270 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HER31_07430 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HER31_07435 ATP-binding cassette domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HER31_06235 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D HER31_04520 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HER31_07725 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HER31_14600 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D HER31_07100 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HER31_07095 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HER31_06640 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HER31_14745 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HER31_14675 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D HER31_14670 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HER31_14565 solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D HER31_14570 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D HER31_14575 energy-coupling factor ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D HER31_18250 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D HER31_18245 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D HER31_18240 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D HER31_13715 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HER31_13710 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D HER31_13705 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HER31_06785 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HER31_06780 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D HER31_06775 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D HER31_06770 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HER31_09655 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HER31_09660 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D HER31_09665 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HER31_05675 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HER31_05685 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D HER31_05690 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HER31_05680 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HER31_13865 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HER31_13870 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HER31_13875 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HER31_13860 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D HER31_13855 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D HER31_04080 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_06175 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_09140 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D HER31_04085 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D HER31_06180 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D HER31_09125 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D HER31_04090 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HER31_06185 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HER31_09120 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HER31_04095 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HER31_06190 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HER31_09115 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HER31_03195 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HER31_07740 PhnD/SsuA/transferrin family substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HER31_03185 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D HER31_03190 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HER31_12845 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HER31_12850 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D HER31_12855 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HER31_03090 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HER31_03080 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D HER31_03085 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D HER31_03070 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HER31_03095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HER31_08185 metQ; methionine ABC transporter substrate-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D HER31_08180 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HER31_08175 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D HER31_11500 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HER31_13320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HER31_13315 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D HER31_13310 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D HER31_13305 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HER31_13300 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HER31_02265 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D HER31_02260 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D HER31_02255 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D HER31_02250 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D HER31_02245 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D HER31_05075 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HER31_07130 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HER31_05065 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HER31_07135 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HER31_05070 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HER31_07140 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HER31_05080 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HER31_07145 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HER31_05085 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HER31_04485 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D HER31_04480 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D HER31_04475 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D HER31_18305 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HER31_18300 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D HER31_04775 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D HER31_06225 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D HER31_18295 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HER31_04770 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HER31_06220 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HER31_04785 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D HER31_04825 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D HER31_06230 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D HER31_09355 zinc ABC transporter solute-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HER31_09365 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D HER31_09360 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HER31_18525 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D HER31_10655 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D HER31_18520 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HER31_18515 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HER31_18510 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HER31_10650 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HER31_18045 zinc ABC transporter solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D HER31_18050 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D HER31_18425 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D HER31_18420 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D HER31_13905 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HER31_08075 ABC transporter permease K09696 natB; sodium transport system permease protein
D HER31_08080 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D HER31_00335 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D HER31_00330 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D HER31_03235 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HER31_03245 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HER31_03240 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HER31_17220 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D HER31_17225 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D HER31_17230 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HER31_17235 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HER31_15940 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HER31_15935 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HER31_13960 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HER31_13965 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HER31_00470 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HER31_04910 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HER31_00465 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HER31_04915 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HER31_17930 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HER31_02475 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HER31_04395 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D HER31_06800 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HER31_17935 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HER31_02470 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HER31_04390 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HER31_06805 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HER31_11440 sodium:sulfate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D HER31_12390 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D HER31_17795 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D HER31_06350 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D HER31_16705 dinF; MATE family efflux transporter DinF K26937 dinF; MATE family, multidrug efflux pump
D HER31_17960 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HER31_08300 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HER31_05090 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HER31_02590 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D HER31_10195 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D HER31_17695 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D HER31_00970 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HER31_11780 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HER31_01335 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HER31_13050 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D HER31_06090 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D HER31_05780 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D HER31_11810 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HER31_08330 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D HER31_13930 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D HER31_08335 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HER31_11210 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HER31_13920 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D HER31_08555 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D HER31_13065 two pore domain potassium channel family protein K10716 kch; voltage-gated potassium channel
D HER31_02225 ion transporter K10716 kch; voltage-gated potassium channel
D HER31_13685 ammonium transporter K03320 amt; ammonium transporter, Amt family
D HER31_12550 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HER31_14965 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HER31_01480 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HER31_13795 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D HER31_12870 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D HER31_06455 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D HER31_06460 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D HER31_06465 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D HER31_10260 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D HER31_10265 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D HER31_06165 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D HER31_16040 focA; formate transporter FocA K06212 focA; formate transporter
D HER31_04655 focA; formate transporter FocA K06212 focA; formate transporter
D HER31_18075 mechanosensitive ion channel K22051 mscM; miniconductance mechanosensitive channel
D HER31_06695 mechanosensitive ion channel K22051 mscM; miniconductance mechanosensitive channel
D HER31_10700 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D HER31_15900 mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D HER31_13465 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D HER31_00920 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D HER31_07845 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HER31_00925 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HER31_07840 OmpA family protein K02557 motB; chemotaxis protein MotB
D HER31_18180 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D HER31_05570 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D HER31_07930 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D HER31_18270 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HER31_18275 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HER31_04495 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HER31_07260 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HER31_07265 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HER31_10060 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HER31_10065 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HER31_18265 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D HER31_07255 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D HER31_10055 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D HER31_05380 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D HER31_05385 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D HER31_07060 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D HER31_08925 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HER31_00595 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HER31_10085 porin K14062 ompN; outer membrane protein N
D HER31_11460 carbohydrate porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D HER31_14290 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HER31_15005 transporter K06076 fadL; long-chain fatty acid transport protein
D HER31_04315 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein
D HER31_10310 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein
D HER31_03005 hypothetical protein K05517 tsx; nucleoside-specific channel-forming protein
D HER31_04765 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D HER31_06215 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D HER31_14135 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HER31_04470 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HER31_10535 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_18310 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_03210 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_04010 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_08685 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_08695 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_08700 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_08705 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_09325 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_10080 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HER31_01840 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D HER31_13235 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HER31_14610 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D HER31_01090 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_05795 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_17060 polysaccharide export protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D HER31_10810 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D HER31_05505 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D HER31_11145 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D HER31_08890 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D HER31_08485 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D HER31_00055 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D HER31_02785 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D HER31_03800 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D HER31_03795 hypothetical protein K09800 tamB; translocation and assembly module TamB
D HER31_13900 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D HER31_13895 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D HER31_13500 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D HER31_12175 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D HER31_17055 outer membrane beta-barrel protein K20920 vpsM; polysaccharide biosynthesis protein VpsM
D HER31_03115 corC; CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D HER31_01580 eutM; ethanolamine utilization microcompartment protein EutM K04027 eutM; ethanolamine utilization protein EutM
D HER31_01585 eutM; ethanolamine utilization microcompartment protein EutM K04027 eutM; ethanolamine utilization protein EutM
D HER31_01525 eat; ethanolamine permease K16238 eat; ethanolamine permease
D HER31_00175 yjeH; L-methionine/branched-chain amino acid transporter K16263 yjeH; amino acid efflux transporter
D HER31_15140 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D HER31_01850 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein
D HER31_16570 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D HER31_14780 multidrug efflux protein K18138 acrB; multidrug efflux pump
D HER31_05790 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_08475 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_05810 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_18490 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump
D HER31_10240 hypothetical protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D HER31_14435 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D HER31_15045 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D HER31_18370 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D HER31_05555 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D HER31_12515 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HER31_08860 L-lactate permease K03303 lutP; lactate permease
D HER31_15310 BCCT transporter K05020 opuD; glycine betaine transporter
D HER31_14650 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D HER31_13880 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D HER31_02570 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D HER31_10305 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D HER31_08250 cation acetate symporter K14393 actP; cation/acetate symporter
D HER31_09215 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D HER31_18655 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D HER31_00155 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D HER31_11790 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D HER31_07530 nhaB; sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D HER31_11035 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D HER31_11425 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D HER31_08670 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D HER31_05825 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D HER31_05830 flavodoxin family protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D HER31_11095 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter
D HER31_15640 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D HER31_15615 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D HER31_08595 uracil-xanthine permease K02824 uraA; uracil permease
D HER31_11315 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HER31_00230 amino acid permease K03834 tyrP; tyrosine-specific transport protein
D HER31_15270 hypothetical protein K03835 mtr; tryptophan-specific transport protein
D HER31_00705 hypothetical protein K03835 mtr; tryptophan-specific transport protein
D HER31_13390 HAAAP family serine/threonine permease K03837 sdaC; serine transporter
D HER31_18465 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D HER31_18495 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D HER31_10325 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D HER31_16340 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D HER31_00390 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HER31_11560 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D HER31_00895 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D HER31_13015 LysE family translocator K05835 rhtC; threonine efflux protein
D HER31_08295 LysE family translocator K05835 rhtC; threonine efflux protein
D HER31_08510 AI-2E family transporter K03548 perM; putative permease
D HER31_16115 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter
D HER31_04105 YchE family NAAT transporter K05595 marC; multiple antibiotic resistance protein
D HER31_17490 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D HER31_08850 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D HER31_04575 hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D HER31_08840 sulfite exporter TauE/SafE family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D HER31_18260 energy transducer TonB K03832 tonB; periplasmic protein TonB
D HER31_07250 energy transducer TonB K03832 tonB; periplasmic protein TonB
D HER31_10050 energy transducer TonB K03832 tonB; periplasmic protein TonB
D HER31_05400 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D HER31_05390 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D HER31_05395 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein
D HER31_12045 sulfite exporter TauE/SafE family protein K06196 ccdA; cytochrome c-type biogenesis protein
D HER31_14690 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_14710 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_15965 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_02070 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_04940 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_04955 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_04980 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HER31_14685 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_14705 4Fe-4S binding protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_15970 4Fe-4S dicluster domain-containing protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_02075 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_04935 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_04950 4Fe-4S binding protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_04975 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HER31_12320 phsA; thiosulfate reductase PhsA K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D HER31_12315 4Fe-4S dicluster domain-containing protein K16293 psrB; polysulfide reductase chain B
D HER31_12310 nrfD; polysulfide reductase NrfD K16294 psrC; polysulfide reductase chain C
D HER31_06085 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D HER31_01845 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D HER31_16565 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D HER31_14785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05815 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_08480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_18485 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D HER31_11490 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D HER31_17065 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D HER31_04020 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D HER31_03440 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D HER31_03445 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D HER31_17250 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D HER31_00255 nrfE; heme lyase NrfEFG subunit NrfE K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:fes02044]
D HER31_13235 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D HER31_14600 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D HER31_14610 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D HER31_13100 AAA family ATPase K02450 gspA; general secretion pathway protein A
D HER31_13095 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D HER31_16770 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D HER31_16775 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D HER31_16780 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HER31_16785 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D HER31_16790 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D HER31_16795 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D HER31_16800 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D HER31_16805 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D HER31_16810 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D HER31_16815 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D HER31_16820 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D HER31_16825 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D HER31_17570 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HER31_17585 pilin K02650 pilA; type IV pilus assembly protein PilA
D HER31_17580 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D HER31_17575 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HER31_00450 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D HER31_09700 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D HER31_08915 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D HER31_17345 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D HER31_17350 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D HER31_17355 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D HER31_17360 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D HER31_17365 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D HER31_01705 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HER31_01710 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D HER31_00430 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D HER31_09685 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D HER31_00435 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D HER31_09690 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D HER31_00440 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D HER31_09695 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D HER31_00445 type IV pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D HER31_09705 fimbrial assembly protein K02674 pilY1; type IV pilus assembly protein PilY1
D HER31_06525 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D HER31_00420 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D HER31_00425 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D HER31_09680 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D HER31_10010 hypothetical protein K08086 fimV; pilus assembly protein FimV
D HER31_12425 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D HER31_12470 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D HER31_12930 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D HER31_14045 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D HER31_14955 type II secretion system protein K10924 mshA; MSHA pilin protein MshA
D HER31_14050 prepilin-type N-terminal cleavage/methylation domain-containing protein K10925 mshB; MSHA pilin protein MshB
D HER31_14040 type II secretion system protein K10926 mshC; MSHA pilin protein MshC
D HER31_14035 prepilin-type N-terminal cleavage/methylation domain-containing protein K10927 mshD; MSHA pilin protein MshD
D HER31_14065 tadA; Flp pilus assembly complex ATPase component TadA K12276 mshE; MSHA biogenesis protein MshE
D HER31_14060 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D HER31_14100 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI
D HER31_14090 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ
D HER31_14085 general secretion pathway protein GspB K12281 mshK; MSHA biogenesis protein MshK
D HER31_14080 mshL; pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D HER31_14075 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM
D HER31_14030 type II secretion system protein K12285 mshO; MSHA biogenesis protein MshO
D HER31_14025 hypothetical protein K12286 mshP; MSHA biogenesis protein MshP
D HER31_14020 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ
D HER31_01690 YggT family protein K02221 yggT; YggT family protein
D HER31_01810 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D HER31_03265 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D HER31_10910 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HER31_07975 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HER31_10915 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HER31_07970 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HER31_01305 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein
D HER31_10980 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HER31_07915 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HER31_10970 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HER31_07905 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D HER31_10965 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HER31_07900 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HER31_10940 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07830 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07950 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D HER31_10935 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HER31_10930 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HER31_07955 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HER31_10925 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HER31_07960 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HER31_10920 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HER31_07965 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HER31_11480 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HER31_06045 hypothetical protein K12205 dotD; defect in organelle trafficking protein DotD
D HER31_00215 molecular chaperone K07346 fimC; fimbrial chaperone protein
D HER31_11640 molecular chaperone K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone
D HER31_09850 hypothetical protein K04335 csgB; minor curlin subunit
D HER31_09840 curli production assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF
D HER31_09845 transporter K06214 csgG; curli production assembly/transport component CsgG
D HER31_17540 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HER31_16005 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D HER31_09045 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HER31_16935 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HER31_09040 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HER31_02915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HER31_17175 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HER31_00605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HER31_15930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HER31_09050 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HER31_15735 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HER31_14400 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D HER31_14405 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D HER31_14410 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:fes02042]
D HER31_08925 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HER31_00595 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HER31_06015 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:fes02022]
D HER31_09145 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HER31_09150 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HER31_07750 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HER31_07745 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HER31_16750 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HER31_16745 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HER31_15155 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D HER31_15150 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HER31_12255 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HER31_12260 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D HER31_00110 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D HER31_06115 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D HER31_13670 hypothetical protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D HER31_13665 response regulator transcription factor K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D HER31_00715 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HER31_05255 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D HER31_09005 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HER31_09010 yehT; two-component system response regulator BtsR K02477 K02477; two-component system, LytTR family, response regulator
D HER31_16240 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HER31_16235 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HER31_04875 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D HER31_14555 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D HER31_05485 GHKL domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D HER31_10880 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HER31_10890 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HER31_10875 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HER31_10410 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HER31_12325 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D HER31_08825 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D HER31_12330 response regulator transcription factor K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D HER31_10995 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D HER31_10990 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_07925 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_03205 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HER31_03200 response regulator K15012 regA; two-component system, response regulator RegA
D HER31_12745 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D HER31_13440 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D HER31_07425 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:fes02035]
D HER31_10880 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HER31_10855 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HER31_10860 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HER31_10405 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HER31_10875 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HER31_10890 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HER31_10885 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HER31_10410 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D HER31_13530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_14325 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_03365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_07670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HER31_14245 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D HER31_10970 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HER31_07905 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D HER31_10965 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HER31_07900 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HER31_10960 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D HER31_10935 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HER31_10930 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HER31_07955 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HER31_10925 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HER31_07960 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HER31_10920 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HER31_07965 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HER31_10910 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HER31_07975 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HER31_10915 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HER31_07970 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HER31_10975 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HER31_07910 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HER31_10945 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HER31_10940 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07830 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HER31_07950 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D HER31_10980 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HER31_07915 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HER31_07785 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HER31_10365 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HER31_07825 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HER31_10415 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HER31_07790 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HER31_10370 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HER31_10950 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HER31_16545 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HER31_07855 hypothetical protein K02415 fliL; flagellar protein FliL
D HER31_10985 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HER31_07920 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HER31_07860 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D HER31_07820 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HER31_10400 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HER31_07815 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HER31_10395 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HER31_07810 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HER31_10390 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HER31_07800 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HER31_10380 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HER31_07795 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HER31_10375 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HER31_07780 peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D HER31_10360 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HER31_07805 flgE; flagellar basal body protein FlgE K02390 flgE; flagellar hook protein FlgE
D HER31_10385 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HER31_07775 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HER31_10355 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HER31_07770 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HER31_10350 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HER31_10425 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HER31_07890 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HER31_10430 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP
D HER31_18180 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D HER31_05570 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D HER31_07930 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D HER31_11025 flagellin K02406 fliC; flagellin
D HER31_07880 Lateral flagellin K02406 fliC; flagellin
D HER31_11015 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HER31_07875 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HER31_11005 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HER31_07870 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D HER31_10895 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HER31_07850 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HER31_00920 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D HER31_07845 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D HER31_00925 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HER31_07840 OmpA family protein K02557 motB; chemotaxis protein MotB
D HER31_11000 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D HER31_10995 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D HER31_10990 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_07925 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D HER31_07885 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HER31_10420 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HER31_11020 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D HER31_10905 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D HER31_10900 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D HER31_01705 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HER31_01710 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D HER31_17585 pilin K02650 pilA; type IV pilus assembly protein PilA
D HER31_17580 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D HER31_17575 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HER31_17570 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HER31_08915 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D HER31_17365 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D HER31_17360 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D HER31_17355 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D HER31_17350 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D HER31_17345 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D HER31_06525 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D HER31_00430 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D HER31_09685 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D HER31_00435 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D HER31_09690 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D HER31_00440 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D HER31_09695 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D HER31_00445 type IV pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D HER31_09705 fimbrial assembly protein K02674 pilY1; type IV pilus assembly protein PilY1
D HER31_00450 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D HER31_09700 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D HER31_00215 molecular chaperone K07346 fimC; fimbrial chaperone protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:fes04812]
D HER31_14015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HER31_07935 StbA family protein K18640 parM; plasmid segregation protein ParM
D HER31_17520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HER31_17515 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HER31_07555 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D HER31_07560 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HER31_07565 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HER31_10865 ParA family protein K03496 parA; chromosome partitioning protein
D HER31_12070 ParA family protein K03496 parA; chromosome partitioning protein
D HER31_15760 ParA family protein K03496 parA; chromosome partitioning protein
D HER31_15765 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:fes04147]
D HER31_09820 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HER31_00740 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HER31_06945 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_06955 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HER31_11540 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HER31_07050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HER31_00975 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HER31_05560 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D HER31_17970 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HER31_02835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HER31_00360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HER31_08870 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HER31_16930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HER31_16990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HER31_03985 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HER31_10640 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_13280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_15885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_16300 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_03075 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07570 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_07580 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HER31_10600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_11365 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HER31_05360 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D HER31_09810 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HER31_02740 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HER31_17330 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HER31_00030 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HER31_15485 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HER31_16250 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HER31_14425 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HER31_02320 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HER31_02310 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D HER31_06030 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HER31_01245 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HER31_17740 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HER31_10550 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HER31_17625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HER31_11045 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D HER31_13720 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D HER31_07040 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HER31_02910 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HER31_11915 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:fes02048]
D HER31_02045 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HER31_02050 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HER31_02020 CRISPR-associated endonuclease Cas3'' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HER31_02040 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D HER31_02030 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D HER31_02035 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D HER31_02025 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D HER31_06680 hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD
D HER31_01900 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D HER31_01905 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D HER31_01910 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D HER31_17385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HER31_10480 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HER31_04695 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D HER31_12865 helix-turn-helix transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D HER31_02285 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D HER31_02280 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D HER31_08000 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HER31_17520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HER31_14015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HER31_13200 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HER31_13210 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HER31_02350 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HER31_11775 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D HER31_08970 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:fes04052]
D HER31_06915 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:fes04090]
D HER31_05360 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:fes01504]
D HER31_11035 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D HER31_11425 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D HER31_13195 hypothetical protein K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D HER31_07750 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D HER31_07745 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D HER31_14785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05785 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_05815 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_08480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HER31_14780 multidrug efflux protein K18138 acrB; multidrug efflux pump
D HER31_05790 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_08475 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_05810 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D HER31_01090 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_05795 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D HER31_06100 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D HER31_09540 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D HER31_13235 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:fes00537]
D HER31_06030 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:fes03100]
D HER31_02355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_08155 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_13770 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_15535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_02410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_02445 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HER31_00845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_14635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_00870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_10445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_09940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HER31_05115 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05135 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05145 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05155 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_05165 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HER31_08025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08030 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08035 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_08140 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_13340 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_16890 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HER31_05275 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HER31_05290 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HER31_05305 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HER31_09445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09490 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09515 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_09530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HER31_02360 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02380 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02390 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02400 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02415 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02425 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02435 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_02460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HER31_00240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_05270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_05285 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_05300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18105 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_18120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_16920 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HER31_09935 tRNA-His K14226 tRNA-His; tRNA His
D HER31_14630 tRNA-His K14226 tRNA-His; tRNA His
D HER31_08160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HER31_13775 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HER31_15540 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HER31_05280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_05295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_05310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_09485 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_09505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_09525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_18340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_18395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_00515 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_02920 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HER31_05410 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05420 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05425 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05430 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05435 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05455 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_05530 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HER31_02925 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05095 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05100 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05105 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05110 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05120 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05130 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05140 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05150 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_05160 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_09480 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_09500 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_09520 tRNA-Met K14230 tRNA-Met; tRNA Met
D HER31_12910 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HER31_01500 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_01505 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_01510 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_01515 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HER31_18720 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_18725 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_18730 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_09945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HER31_06170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_06265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_06275 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_07295 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_07305 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_00840 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_06280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_04065 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_04220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HER31_13740 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_16910 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_15520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_16925 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HER31_12305 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HER31_12350 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HER31_05200 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05205 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05210 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05215 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_05220 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_16915 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HER31_02365 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02375 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02385 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02395 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02405 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02420 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02430 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02440 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_02455 tRNA-Val K14237 tRNA-Val; tRNA Val
D HER31_04660 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HER31_17270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HER31_08150 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HER31_00085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HER31_15865 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HER31_12495 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D HER31_01255 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D HER31_17690 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D HER31_18230 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D HER31_06920 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D HER31_16170 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D HER31_05915 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D HER31_01085 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D HER31_04185 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HER31_03535 bifunctional methionine sulfoxide reductase B/A protein K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HER31_16575 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HER31_02160 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HER31_02185 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HER31_03660 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D HER31_10585 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D HER31_08465 alpha/beta fold hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D HER31_08500 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HER31_01080 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HER31_13700 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D HER31_05845 nickel-dependent hydrogenase large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D HER31_05840 hydrogenase small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D HER31_17850 superoxide dismutase K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1]
D HER31_15380 ftnA; non-heme ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D HER31_11390 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HER31_10160 norW; NADH:flavorubredoxin reductase NorW K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D HER31_08525 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HER31_06040 nrdG; anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HER31_02550 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HER31_09710 iron-sulfur cluster-binding domain-containing protein K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D HER31_04580 4Fe-4S dicluster domain-containing protein K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D HER31_04585 hyfB; hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D HER31_04590 respiratory chain complex I subunit 1 family protein K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D HER31_04595 hydrogenase 4 subunit D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D HER31_04600 hyfE; hydrogenase 4 membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D HER31_04605 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D HER31_04610 hydrogenase large subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D HER31_00770 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D HER31_01430 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D HER31_04505 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D HER31_16205 coproporphyrinogen III oxidase family protein K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D HER31_10750 acyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D HER31_11655 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D HER31_01135 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D HER31_03110 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D HER31_06420 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D HER31_05315 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D HER31_07110 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D HER31_03640 DUF3488 domain-containing transglutaminase family protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D HER31_07115 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D HER31_17015 glycosyltransferase family 4 protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D HER31_16630 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D HER31_14315 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D HER31_11805 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HER31_15105 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HER31_01050 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HER31_07475 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HER31_08830 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HER31_12500 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D HER31_05735 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HER31_13055 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HER31_14995 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D HER31_13430 protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D HER31_12020 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D HER31_11605 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_12540 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_12585 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_14280 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_14730 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_15215 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_15250 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_15265 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_15290 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_15340 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_16180 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_00965 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_02125 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_04565 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_09195 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D HER31_07230 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D HER31_15890 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HER31_05375 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HER31_02635 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HER31_03910 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HER31_10215 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HER31_00010 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D HER31_01465 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D HER31_15910 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D HER31_02215 MBL fold metallo-hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D HER31_00545 deoxyribonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D HER31_14420 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HER31_02995 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HER31_06530 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HER31_14835 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D HER31_04165 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D HER31_13650 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HER31_15600 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HER31_13405 acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D HER31_13985 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D HER31_13070 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D HER31_03575 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D HER31_03650 AAA domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HER31_06480 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HER31_10245 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HER31_12505 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D HER31_18125 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HER31_12510 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D HER31_00810 2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D HER31_00040 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D HER31_00565 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D HER31_04440 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D HER31_04445 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D HER31_04450 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D HER31_01020 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D HER31_03740 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D HER31_01025 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D HER31_03735 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D HER31_01030 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D HER31_03730 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D HER31_01035 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D HER31_03725 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D HER31_01040 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D HER31_03720 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D HER31_01045 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D HER31_03715 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D HER31_06730 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D HER31_12705 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D HER31_09745 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D HER31_09740 lactate utilization protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D HER31_09735 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D HER31_14545 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D HER31_04650 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D HER31_06905 2Fe-2S iron-sulfur cluster binding domain-containing protein K11107 yfaE; ferredoxin
D HER31_04435 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D HER31_04430 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D HER31_04455 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D HER31_04635 4Fe-4S dicluster domain-containing protein K05796 hydN; electron transport protein HydN
D HER31_15745 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D HER31_04615 4Fe-4S dicluster domain-containing protein K12143 hyfH; hydrogenase-4 component H
D HER31_08965 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D HER31_04620 NADH-quinone oxidoreductase subunit B family protein K15832 hycG; formate hydrogenlyase subunit 7
D HER31_10155 norV; anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D HER31_11585 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD
D HER31_06140 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD
D HER31_08435 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD
D HER31_08430 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D HER31_00250 cytochrome c-type biogenesis protein CcmH K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D HER31_00275 hypothetical protein K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D HER31_00305 hypothetical protein K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D HER31_04150 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
D HER31_03450 cytochrome C K02569 napC; cytochrome c-type protein NapC
D HER31_08450 cytochrome C K02569 napC; cytochrome c-type protein NapC
D HER31_11050 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D HER31_13725 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D HER31_11880 nitrite reductase K04013 nrfB; cytochrome c-type protein NrfB
D HER31_11885 4Fe-4S dicluster domain-containing protein K04014 nrfC; protein NrfC
D HER31_00280 4Fe-4S binding protein K04014 nrfC; protein NrfC
D HER31_00310 4Fe-4S binding protein K04014 nrfC; protein NrfC
D HER31_11890 nrfD; polysulfide reductase NrfD K04015 nrfD; protein NrfD
D HER31_00285 nrfD; polysulfide reductase NrfD K04015 nrfD; protein NrfD
D HER31_00315 nrfD; polysulfide reductase NrfD K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
D HER31_03705 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D HER31_08290 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein
D HER31_01565 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D HER31_01540 eutL; ethanolamine utilization microcompartment protein EutL K04026 eutL; ethanolamine utilization protein EutL
D HER31_01575 EutN/CcmL family microcompartment protein K04028 eutN; ethanolamine utilization protein EutN
D HER31_01605 ethanolamine utilization protein K04029 eutP; ethanolamine utilization protein EutP
D HER31_01600 eutQ; ethanolamine utilization acetate kinase EutQ K04030 eutQ; ethanolamine utilization protein EutQ
D HER31_01610 eutS; ethanolamine utilization microcompartment protein EutS K04031 eutS; ethanolamine utilization protein EutS
D HER31_01700 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HER31_17030 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ
D HER31_06845 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D HER31_06840 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D HER31_15050 hypothetical protein K02498 hemY; HemY protein
D HER31_14395 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D HER31_14390 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D HER31_14645 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D HER31_11285 SCP2 sterol-binding domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D HER31_01535 NADH dehydrogenase subunit K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HER31_05605 cold-shock protein K03704 cspA; cold shock protein
D HER31_05610 cold-shock protein K03704 cspA; cold shock protein
D HER31_07160 cspD; cold shock domain-containing protein CspD K03704 cspA; cold shock protein
D HER31_17645 rsd; sigma D regulator K07740 rsd; regulator of sigma D
D HER31_04625 HycH family protein K15834 hycH; formate hydrogenlyase maturation protein HycH
D HER31_13680 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D HER31_16735 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D HER31_05710 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D HER31_07155 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D HER31_09930 tig; trigger factor K03545 tig; trigger factor
D HER31_03665 msrQ; protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D HER31_02770 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D HER31_18545 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D HER31_05865 hypC; HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D HER31_18540 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D HER31_18535 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D HER31_05870 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D HER31_14825 ATP-binding protein K07391 comM; magnesium chelatase family protein
D HER31_14910 ATP-binding protein K07391 comM; magnesium chelatase family protein
D HER31_16715 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D HER31_04310 methylated-DNA--[protein]-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D HER31_09180 xni; flap endonuclease Xni K01146 xni; protein Xni
D HER31_16410 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HER31_16330 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D HER31_02145 endonuclease K07457 K07457; endonuclease III related protein
D HER31_04705 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D HER31_17425 YraN family protein K07460 yraN; putative endonuclease
D HER31_05325 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D HER31_15590 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D HER31_07065 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D HER31_15580 hypothetical protein K07479 yrdD; putative DNA topoisomerase
D HER31_10830 transposase K07491 rayT; REP-associated tyrosine transposase
D HER31_10735 IS256 family transposase K07493 K07493; putative transposase
D HER31_01870 IS256 family transposase K07493 K07493; putative transposase
D HER31_10730 transposase K07497 K07497; putative transposase
D HER31_12885 transposase family protein K07497 K07497; putative transposase
D HER31_01825 transposase K07497 K07497; putative transposase
D HER31_01980 IS3 family transposase K07497 K07497; putative transposase
D HER31_06270 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D HER31_02275 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D HER31_10315 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D HER31_02750 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HER31_15375 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HER31_01385 hypothetical protein K03293 TC.AAT; amino acid transporter, AAT family
D HER31_03300 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D HER31_03305 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D HER31_14160 hypothetical protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D HER31_14655 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D HER31_10815 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D HER31_05670 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D HER31_11475 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HER31_13080 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HER31_11705 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D HER31_06580 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HER31_00370 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HER31_01225 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HER31_05900 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HER31_11510 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D HER31_13000 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D HER31_03000 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D HER31_05465 oligosaccharide flippase family protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D HER31_02595 septation protein A K06190 ispZ; intracellular septation protein
D HER31_03050 sporulation protein K06377 spo0M; sporulation-control protein
D HER31_09890 sporulation protein K06377 spo0M; sporulation-control protein
D HER31_07520 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D HER31_15990 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D HER31_13640 lpoB; penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D HER31_11260 syd; SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D HER31_17605 ampE; beta-lactamase regulator AmpE K03807 ampE; AmpE protein
D HER31_06570 proQ; RNA chaperone ProQ K03607 proQ; ProP effector
D HER31_12940 universal stress protein K06149 uspA; universal stress protein A
D HER31_06750 uspE; universal stress protein UspE K14055 uspE; universal stress protein E
D HER31_16255 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D HER31_01400 hypothetical protein K07167 chrR; putative transcriptional regulator
D HER31_03125 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D HER31_13455 PhoH family protein K07175 phoH2; PhoH-like ATPase
D HER31_07510 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D HER31_14665 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein
D HER31_08230 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein
D HER31_13085 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D HER31_03030 hypothetical protein K07186 smp; membrane protein
D HER31_00955 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D HER31_07070 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D HER31_09435 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D HER31_01315 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D HER31_07105 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D HER31_11140 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D HER31_00775 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D HER31_02970 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D HER31_01240 ompW; outer membrane protein OmpW K07275 ompW; outer membrane protein
D HER31_11530 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D HER31_18195 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D HER31_00980 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D HER31_08095 AsmA family protein K07289 asmA; AsmA protein
D HER31_16590 NfeD family protein K07340 ybbJ; inner membrane protein
D HER31_13970 biotin/lipoyl-binding protein K01993 ABC-2.TX; HlyD family secretion protein
D HER31_17940 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D HER31_02490 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D HER31_17215 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D HER31_17245 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D HER31_17260 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D HER31_08910 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
D HER31_01530 BMC domain-containing protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D HER31_09110 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D HER31_18060 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D HER31_17950 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D HER31_13520 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D HER31_15075 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D HER31_00325 nosD; nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D HER31_14550 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein
D HER31_04510 hutX; heme utilization cystosolic carrier protein HutX K07227 chuX; heme iron utilization protein
D HER31_16855 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D HER31_18505 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
D HER31_00320 nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HER31_09985 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D HER31_06760 glucosaminidase K03796 bax; Bax protein
D HER31_10300 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D HER31_13785 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D HER31_11090 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D HER31_18585 BamA/TamA family outer membrane protein K07001 K07001; NTE family protein
D HER31_10320 rssA; patatin-like phospholipase RssA K07001 K07001; NTE family protein
D HER31_07375 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D HER31_18475 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D HER31_16280 virulence factor BrkB family protein K07058 K07058; membrane protein
D HER31_17955 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D HER31_13415 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D HER31_07180 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D HER31_08190 LemA family protein K03744 lemA; LemA protein
D HER31_13655 SlyX family protein K03745 slyX; SlyX protein
D HER31_15585 DUF494 domain-containing protein K03747 smg; Smg protein
D HER31_10615 CreA family protein K05805 creA; CreA protein
D HER31_00550 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D HER31_09990 SPOR domain-containing protein K03749 dedD; DedD protein
D HER31_17380 AAA family ATPase K03112 damX; DamX protein
D HER31_06550 paraquat-inducible membrane protein A K03808 pqiA; paraquat-inducible protein A
D HER31_06555 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D HER31_08385 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D HER31_07420 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D HER31_04370 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D HER31_02295 TIGR01620 family protein K08990 ycjF; putative membrane protein
D HER31_15920 DUF1145 domain-containing protein K08993 yhhL; putative membrane protein
D HER31_05240 YchJ family protein K09858 K09858; SEC-C motif domain protein
D HER31_15190 hypothetical protein K09914 K09914; putative lipoprotein
D HER31_08995 phosphate-starvation-inducible PsiE family protein K13256 psiE; protein PsiE
D HER31_03855 PhnA domain protein K06193 phnA; protein PhnA
C 99997 Function unknown
D HER31_02110 SnoaL-like domain-containing protein K06893 K06893; uncharacterized protein
D HER31_02290 YcjX family protein K06918 K06918; uncharacterized protein
D HER31_03695 DUF134 domain-containing protein K06933 K06933; uncharacterized protein
D HER31_18530 DUF296 domain-containing protein K06934 K06934; uncharacterized protein
D HER31_15950 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D HER31_16110 HD domain-containing protein K06950 K06950; uncharacterized protein
D HER31_01420 NAD(P)-binding protein K06954 K06954; uncharacterized protein
D HER31_14450 L-cystine transporter K06956 K06956; uncharacterized protein
D HER31_03820 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D HER31_03945 VOC family protein K06996 K06996; uncharacterized protein
D HER31_13215 esterase YqiA K07000 K07000; uncharacterized protein
D HER31_02710 alpha/beta hydrolase K07000 K07000; uncharacterized protein
D HER31_06610 RND family transporter K07003 K07003; uncharacterized protein
D HER31_04250 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D HER31_13610 hydrolase K07019 K07019; uncharacterized protein
D HER31_09260 alpha/beta hydrolase K07020 K07020; uncharacterized protein
D HER31_02150 zinc metallopeptidase K07054 K07054; uncharacterized protein
D HER31_13635 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein
D HER31_02480 TIGR01777 family protein K07071 K07071; uncharacterized protein
D HER31_12040 permease K07089 K07089; uncharacterized protein
D HER31_17750 SO_0444 family Cu/Zn efflux transporter K07089 K07089; uncharacterized protein
D HER31_09780 permease K07089 K07089; uncharacterized protein
D HER31_10290 permease K07089 K07089; uncharacterized protein
D HER31_11670 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D HER31_13395 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D HER31_05905 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D HER31_10105 TSUP family transporter K07090 K07090; uncharacterized protein
D HER31_05595 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein
D HER31_14275 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D HER31_17430 hypothetical protein K07121 K07121; uncharacterized protein
D HER31_15365 DUF4145 domain-containing protein K07126 K07126; uncharacterized protein
D HER31_08800 MAPEG family protein K07136 K07136; uncharacterized protein
D HER31_18710 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D HER31_18590 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D HER31_04840 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D HER31_01410 ATP-dependent protease K07157 K07157; uncharacterized protein
D HER31_15730 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D HER31_13140 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D HER31_01685 YggU family protein K09131 K09131; uncharacterized protein
D HER31_07470 hypothetical protein K09138 K09138; uncharacterized protein
D HER31_12225 YbeD family protein K09158 K09158; uncharacterized protein
D HER31_07540 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D HER31_17715 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D HER31_01425 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D HER31_00495 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D HER31_13005 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D HER31_02585 YciI family protein K09780 K09780; uncharacterized protein
D HER31_11330 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D HER31_07515 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D HER31_13435 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D HER31_03280 Trm112 family protein K09791 K09791; uncharacterized protein
D HER31_06740 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D HER31_13295 YdcH family protein K09794 K09794; uncharacterized protein
D HER31_18715 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D HER31_01360 YdcH family protein K09794 K09794; uncharacterized protein
D HER31_15980 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D HER31_02780 RnfH family protein K09801 K09801; uncharacterized protein
D HER31_08260 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D HER31_03710 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D HER31_11555 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D HER31_13645 hypothetical protein K09859 K09859; uncharacterized protein
D HER31_00375 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D HER31_17555 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D HER31_00710 YjaG family protein K09891 K09891; uncharacterized protein
D HER31_16075 GTPase-activating protein K09894 K09894; uncharacterized protein
D HER31_12640 UPF0149 family protein K09895 K09895; uncharacterized protein
D HER31_12675 YihD family protein K09896 K09896; uncharacterized protein
D HER31_13605 YheU family protein K09898 K09898; uncharacterized protein
D HER31_02545 DUF412 domain-containing protein K09899 K09899; uncharacterized protein
D HER31_07550 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D HER31_04255 DUF1414 domain-containing protein K09904 K09904; uncharacterized protein
D HER31_05590 VOC family protein K09907 K09907; uncharacterized protein
D HER31_13830 DUF1043 family protein K09908 K09908; uncharacterized protein
D HER31_17910 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein
D HER31_10115 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein
D HER31_13660 YacL family protein K09910 K09910; uncharacterized protein
D HER31_15185 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D HER31_10820 DUF480 domain-containing protein K09915 K09915; uncharacterized protein
D HER31_06935 DUF1315 family protein K09916 K09916; uncharacterized protein
D HER31_07370 YoaH family protein K09917 K09917; uncharacterized protein
D HER31_07735 YebG family protein K09918 K09918; uncharacterized protein
D HER31_08375 N-acetyltransferase K09919 K09919; uncharacterized protein
D HER31_13225 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D HER31_15095 DUF484 family protein K09921 K09921; uncharacterized protein
D HER31_11950 DUF469 family protein K09923 K09923; uncharacterized protein
D HER31_01640 DUF469 family protein K09923 K09923; uncharacterized protein
D HER31_06725 FixH family protein K09926 K09926; uncharacterized protein
D HER31_01365 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein
D HER31_03260 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D HER31_02735 DUF2063 domain-containing protein K09929 K09929; uncharacterized protein
D HER31_02730 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D HER31_09625 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D HER31_18170 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D HER31_08585 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D HER31_09330 peptidase K09939 K09939; uncharacterized protein
D HER31_10575 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D HER31_16055 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D HER31_04385 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D HER31_05195 DUF3820 family protein K09954 K09954; uncharacterized protein
D HER31_01370 ACT domain-containing protein K09964 K09964; uncharacterized protein
D HER31_18010 TraB/GumN family protein K09973 K09973; uncharacterized protein
D HER31_06395 DUF1853 family protein K09977 K09977; uncharacterized protein
D HER31_05750 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D HER31_11470 DUF47 family protein K07220 K07220; uncharacterized protein
D HER31_13075 TIGR00153 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024