+F Repair protein KO
#
DNA Repair and Recombination Proteins - Fusarium graminearum
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D FGSG_10886 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D FGSG_00797 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E FGSG_00911 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E FGSG_00873 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E FGSG_10290 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E FGSG_08058 hypothetical protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E FGSG_07050 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E FGSG_10201 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E FGSG_01348 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E FGSG_08889 hypothetical protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F FGSG_07175 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F FGSG_07164 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
F FGSG_04257 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
F FGSG_06032 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F FGSG_12863 DNA polymerase epsilon K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F FGSG_09899 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F FGSG_01182 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E FGSG_01052 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E FGSG_10789 structure-specific endonuclease RAD27 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E FGSG_05453 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E FGSG_12884 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E FGSG_10482 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E FGSG_05924 hypothetical protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F FGSG_08372 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F FGSG_05269 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F FGSG_06767 hypothetical protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F FGSG_02497 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F FGSG_05520 hypothetical protein K10609 CUL4; cullin 4
F FGSG_05252 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F FGSG_05905 hypothetical protein K15082 RAD7; DNA repair protein RAD7
F FGSG_05904 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F FGSG_00916 DNA-directed RNA polymerase II largest subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F FGSG_02659 DNA-directed RNA polymerase K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F FGSG_01447 DNA-directed RNA polymerase II 33 kDa polypeptide K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F FGSG_01125 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F FGSG_09748 DNA-directed RNA polymerases II 24 kDa polypeptide K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F FGSG_06683 DNA-directed RNA polymerases I K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F FGSG_01220 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F FGSG_04273 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F FGSG_06531 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F FGSG_11855 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F FGSG_06818 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F FGSG_04037 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F FGSG_02497 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F FGSG_05520 hypothetical protein K10609 CUL4; cullin 4
F FGSG_05252 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
F FGSG_10054 hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F FGSG_02540 hypothetical protein K10841 ERCC6; DNA excision repair protein ERCC-6
F FGSG_07476 hypothetical protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E FGSG_07280 DNA repair helicase RAD25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E FGSG_04295 TFIIH basal transcription factor complex helicase subunit K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E FGSG_04308 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E FGSG_06002 suppressor of stem-loop protein 1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E FGSG_10862 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E FGSG_08299 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E FGSG_09978 RNA polymerase II transcription factor B subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E FGSG_07423 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E FGSG_02126 hypothetical protein K06634 CCNH; cyclin H
E FGSG_09166 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E FGSG_10122 hypothetical protein K07466 RFA1; replication factor A1
E FGSG_09724 hypothetical protein K10739 RFA2; replication factor A2
D Other NER factors
E FGSG_01666 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells
E FGSG_09259 mating-type switching protein swi10 K10849 ERCC1; DNA excision repair protein ERCC-1
E FGSG_08658 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E FGSG_11856 DNA-repair protein rad13 K10846 ERCC5; DNA excision repair protein ERCC-5
E FGSG_05453 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E FGSG_05599 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E FGSG_00359 hypothetical protein K03869 CUL3; cullin 3
E FGSG_00303 hypothetical protein K03872 ELOC; elongin-C
E FGSG_01117 hypothetical protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E FGSG_06330 DNA mismatch repair protein msh-2 K08735 MSH2; DNA mismatch repair protein MSH2
E FGSG_07112 hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3
E FGSG_07549 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E FGSG_09728 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1
E FGSG_01929 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
E FGSG_01614 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E FGSG_07175 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E FGSG_07164 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E FGSG_04257 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E FGSG_06032 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E FGSG_10122 hypothetical protein K07466 RFA1; replication factor A1
E FGSG_09724 hypothetical protein K10739 RFA2; replication factor A2
D RFC (replication factor C)
E FGSG_00327 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E FGSG_01208 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E FGSG_07200 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
E FGSG_00329 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
E FGSG_06027 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E FGSG_01052 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E FGSG_07043 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E FGSG_05453 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E FGSG_07849 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E FGSG_01699 double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E FGSG_11814 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E FGSG_01699 double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E FGSG_11814 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E FGSG_01157 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E FGSG_01157 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
E FGSG_00844 hypothetical protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E FGSG_10158 hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E FGSG_07962 DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E FGSG_00551 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E FGSG_00551 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E FGSG_06716 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E FGSG_06321 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E FGSG_10122 hypothetical protein K07466 RFA1; replication factor A1
E FGSG_09724 hypothetical protein K10739 RFA2; replication factor A2
D Protein phosphatase 4
E FGSG_06212 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E FGSG_08702 hypothetical protein K22803 SMC5; structural maintenance of chromosomes protein 5
E FGSG_09838 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6
E FGSG_09562 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E FGSG_08455 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
D Other HR factors
E FGSG_01691 hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E FGSG_06820 hypothetical protein K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E FGSG_01132 crossover junction endonuclease MUS81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E FGSG_03991 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E FGSG_05856 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E FGSG_04386 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E FGSG_14036 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E FGSG_09851 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E FGSG_00736 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E FGSG_00548 hypothetical protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E FGSG_12711 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E FGSG_06721 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E FGSG_01699 double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E FGSG_11814 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E FGSG_04154 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E FGSG_07013 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E FGSG_01896 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
E FGSG_00621 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E FGSG_05331 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E FGSG_14001 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E FGSG_07161 hypothetical protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E FGSG_00551 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E FGSG_06716 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E FGSG_06321 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E FGSG_07046 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E FGSG_01157 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
E FGSG_00363 hypothetical protein K11137 TELO2; telomere length regulation protein
E FGSG_04351 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E FGSG_05256 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E FGSG_07307 hypothetical protein K24752 WDR70; WD repeat-containing protein 70
E FGSG_07849 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D FGSG_08914 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D FGSG_06286 hypothetical protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D FGSG_01406 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D FGSG_01035 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D FGSG_08898 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D FGSG_12683 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D FGSG_04258 postreplication repair E3 ubiquitin-protein ligase rad18 K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D FGSG_02724 DNA repair protein RAD5 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D FGSG_09828 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D FGSG_11234 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D FGSG_07734 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D FGSG_09295 hypothetical protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
C Other TLS factors
D FGSG_01052 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D FGSG_07947 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D FGSG_04141 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D FGSG_05214 hypothetical protein K10903 HUS1; HUS1 checkpoint protein
D FGSG_00281 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D FGSG_00970 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D FGSG_01208 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D FGSG_07200 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D FGSG_00329 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D FGSG_06027 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D FGSG_00281 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D FGSG_06814 hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D FGSG_11622 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D FGSG_09939 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D FGSG_00363 hypothetical protein K11137 TELO2; telomere length regulation protein
D FGSG_05573 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D FGSG_06244 hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D FGSG_07320 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D FGSG_13318 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D FGSG_05519 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D FGSG_01506 hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D FGSG_07121 hypothetical protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D FGSG_00565 hypothetical protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D FGSG_01241 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D FGSG_06847 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D FGSG_10228 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D FGSG_05388 hypothetical protein K24664 FKH; forkhead protein FKH
D FGSG_10964 vacuolar protein sorting-associated protein 4 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D FGSG_06269 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D FGSG_11782 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D FGSG_00361 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D FGSG_09683 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
D FGSG_08495 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D FGSG_10221 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D FGSG_02706 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D FGSG_09807 pre-mRNA-splicing factor cef-1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D FGSG_09907 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D FGSG_01337 pre-mRNA-splicing factor prp46 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D FGSG_09179 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FGSG_00904 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D FGSG_05174 ribonucleoside-diphosphate reductase large chain K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D FGSG_05409 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D FGSG_10886 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D FGSG_00797 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E FGSG_00911 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E FGSG_10090 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E FGSG_10290 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E FGSG_08451 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E FGSG_10201 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E FGSG_08405 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E FGSG_08405 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D FGSG_09179 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FGSG_00904 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024