+E Replication protein KO
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DNA Replication Proteins - Fomitiporia mediterranea
%
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
D FOMMEDRAFT_103131 P-loop containing nucleoside triphosphate hydrolase protein K02603 ORC1; origin recognition complex subunit 1
D FOMMEDRAFT_100475 origin recognition complex subunit 2 K02604 ORC2; origin recognition complex subunit 2
D FOMMEDRAFT_123809 hypothetical protein K02605 ORC3; origin recognition complex subunit 3
D FOMMEDRAFT_89695 hypothetical protein K02606 ORC4; origin recognition complex subunit 4
D FOMMEDRAFT_144006 hypothetical protein K02607 ORC5; origin recognition complex subunit 5
D FOMMEDRAFT_146961 P-loop containing nucleoside triphosphate hydrolase protein K02213 CDC6; cell division control protein 6
D FOMMEDRAFT_108613 MCM-domain-containing protein K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
D FOMMEDRAFT_106959 ATP dependent DNA helicase K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
D FOMMEDRAFT_103281 MCM-domain-containing protein K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
D FOMMEDRAFT_167555 MCM-domain-containing protein K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
D FOMMEDRAFT_124053 mis5 protein K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
D FOMMEDRAFT_109511 ATP dependent DNA helicase K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
D FOMMEDRAFT_111674 kinase-like protein K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
D FOMMEDRAFT_141037 hypothetical protein K02309 DBF4; regulatory subunit for Cdc7p protein kinase
C GINS complex
D FOMMEDRAFT_101938 DNA replication complex GINS protein PSF1 K10732 GINS1; GINS complex subunit 1
D FOMMEDRAFT_135550 Psf2-domain-containing protein K10733 GINS2; GINS complex subunit 2
D FOMMEDRAFT_110862 GINS complex, Psf3 component K10734 GINS3; GINS complex subunit 3
D FOMMEDRAFT_90704 GINS complex, Sld5 component K10735 GINS4; GINS complex subunit 4
C Other initiation factors
D FOMMEDRAFT_165286 hypothetical protein K03507 DPB11; DNA replication regulator DPB11
D FOMMEDRAFT_21066 CDC45-like protein K06628 CDC45; cell division control protein 45
D FOMMEDRAFT_81119 hypothetical protein K10736 MCM10; minichromosome maintenance protein 10
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
D FOMMEDRAFT_137775 hypothetical protein K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
D FOMMEDRAFT_133703 DNA polymerase alpha, subunit B K02321 POLA2; DNA polymerase alpha subunit B
D FOMMEDRAFT_115096 prim-pol domain-containing protein K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
D FOMMEDRAFT_104073 DNA primase, large subunit K02685 PRI2; DNA primase large subunit
C DNA polymerase epsilon complex
D FOMMEDRAFT_138263 DUF1744-domain-containing protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
D FOMMEDRAFT_141833 epsilon DNA polymerase K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
D FOMMEDRAFT_170463 histone-fold-containing protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
D FOMMEDRAFT_114740 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
C DNA polymerase delta complex
D FOMMEDRAFT_164466 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
D FOMMEDRAFT_109238 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
D FOMMEDRAFT_22443 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
C DNA polymerase gamma complex (mitochondrial)
D FOMMEDRAFT_153471 hypothetical protein K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
C RPA (replication protein A)
D FOMMEDRAFT_109397 replication factor-a protein K07466 RFA1; replication factor A1
D FOMMEDRAFT_124996 replication protein A, subunit RPA32 K10739 RFA2; replication factor A2
D FOMMEDRAFT_149629 replication factor A protein 3 K10740 RPA3; replication factor A3
C RFC (replication factor C)
D FOMMEDRAFT_125132 DNA replication factor C, large subunit K10754 RFC1; replication factor C subunit 1
D FOMMEDRAFT_132390 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D FOMMEDRAFT_120792 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D FOMMEDRAFT_138707 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
D FOMMEDRAFT_72721 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
C RNase H
D FOMMEDRAFT_23654 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D FOMMEDRAFT_165421 hypothetical protein K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
D FOMMEDRAFT_156092 hypothetical protein K10744 RNASEH2B; ribonuclease H2 subunit B
C Other elongation factors
D FOMMEDRAFT_136996 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D FOMMEDRAFT_78324 Dna2-domain-containing protein K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D FOMMEDRAFT_109188 P-loop containing nucleoside triphosphate hydrolase protein K19783 HCS1; DNA polymerase alpha-associated DNA helicase A [EC:5.6.2.3]
D FOMMEDRAFT_148871 PIN domain-like protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D FOMMEDRAFT_168154 PIN domain-like protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D FOMMEDRAFT_84667 PIN domain-like protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
D FOMMEDRAFT_155252 DNA ligase I K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DNA Replication Termination Factors
C DNA methylation enzymes
D FOMMEDRAFT_157471 S-adenosyl-L-methionine-dependent methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D FOMMEDRAFT_168758 S-adenosyl-L-methionine-dependent methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D FOMMEDRAFT_171001 S-adenosyl-L-methionine-dependent methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
E FOMMEDRAFT_97591 SIR2-domain-containing protein K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286]
E FOMMEDRAFT_83466 DHS-like NAD/FAD-binding domain-containing protein K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286]
C Telomerase complex (animals)
D Dyskerin complex
E FOMMEDRAFT_134686 Gar1-domain-containing protein K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
E FOMMEDRAFT_90168 L30e-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
E FOMMEDRAFT_95636 Nop10p-domain-containing protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
E FOMMEDRAFT_139987 putative rRNA pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
C Telomerase complex (fungi)
D Sm core complex
E FOMMEDRAFT_115847 Sm-like ribonucleo protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E FOMMEDRAFT_143300 Sm-like ribonucleo protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
E FOMMEDRAFT_140187 Sm-like ribonucleo protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
E FOMMEDRAFT_107963 Sm-like ribonucleo protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
E FOMMEDRAFT_125703 small nuclear ribonucleo protein SmF K11098 SNRPF; small nuclear ribonucleoprotein F
E FOMMEDRAFT_141897 like-Sm ribonucleo protein K11099 SNRPG; small nuclear ribonucleoprotein G
C ELG1-RFC complex
D FOMMEDRAFT_132390 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D FOMMEDRAFT_120792 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D FOMMEDRAFT_138707 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
D FOMMEDRAFT_72721 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
C MRN complex
D FOMMEDRAFT_138837 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11
D FOMMEDRAFT_171500 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
C Other termination factors
D FOMMEDRAFT_100399 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D FOMMEDRAFT_166191 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D FOMMEDRAFT_107109 PARP-domain-containing protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D FOMMEDRAFT_164781 hypothetical protein K11135 PINX1; Pin2-interacting protein X1
D FOMMEDRAFT_113710 hypothetical protein K11137 TELO2; telomere length regulation protein
D FOMMEDRAFT_169368 WD40 repeat-like protein K23314 WRAP53; telomerase Cajal body protein 1
D FOMMEDRAFT_76490 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
D FOMMEDRAFT_122385 DUF602-domain-containing protein K25186 RTF2; replication termination factor 2
B DNA Topoisomerases
C FOMMEDRAFT_20466 hypothetical protein K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C FOMMEDRAFT_122296 DNA topoisomerase II K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C FOMMEDRAFT_108365 prokaryotic type I DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
D RNase H
E FOMMEDRAFT_23654 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Other elongation factors
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E FOMMEDRAFT_23654 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
E FOMMEDRAFT_78324 Dna2-domain-containing protein K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
E FOMMEDRAFT_148871 PIN domain-like protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E FOMMEDRAFT_168154 PIN domain-like protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E FOMMEDRAFT_155252 DNA ligase I K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022