+D GENES KO
#
KEGG Orthology (KO) - Fusobacterium necrophorum subsp. funduliforme
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:fnf00010]
D BSQ88_01415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D BSQ88_10230 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BSQ88_06810 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D BSQ88_06605 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BSQ88_07650 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BSQ88_01485 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BSQ88_08230 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BSQ88_08225 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BSQ88_00475 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BSQ88_01490 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BSQ88_06495 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BSQ88_06500 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BSQ88_06610 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D BSQ88_08030 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_01015 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_00815 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BSQ88_04430 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BSQ88_05965 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BSQ88_05180 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BSQ88_09440 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D BSQ88_05390 PTS sugar transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:fnf00020]
D BSQ88_03900 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D BSQ88_03905 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D BSQ88_08030 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_01015 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:fnf00030]
D BSQ88_10230 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BSQ88_07575 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BSQ88_09520 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BSQ88_09525 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BSQ88_03820 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D BSQ88_00265 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D BSQ88_05965 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BSQ88_01390 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BSQ88_07650 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BSQ88_06810 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D BSQ88_06605 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:fnf00040]
D BSQ88_02870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BSQ88_07575 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BSQ88_05225 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:fnf00051]
D BSQ88_05225 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BSQ88_06810 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D BSQ88_06605 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BSQ88_04310 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D BSQ88_07650 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BSQ88_01485 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BSQ88_03820 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D BSQ88_04315 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:fnf00052]
D BSQ88_04430 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BSQ88_05745 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BSQ88_05740 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D BSQ88_05735 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BSQ88_02870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BSQ88_05965 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BSQ88_01415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:fnf00500]
D BSQ88_06325 PTS glucose transporter subunit IIB K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D BSQ88_02870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BSQ88_04290 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D BSQ88_04295 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D BSQ88_04300 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D BSQ88_04285 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D BSQ88_04280 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D BSQ88_05650 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D BSQ88_05180 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BSQ88_05640 alpha-glucoside-specific phosphotransferase enzyme IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D BSQ88_05645 endonuclease K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D BSQ88_04330 glycogen-debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D BSQ88_05965 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BSQ88_01415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D BSQ88_10230 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:fnf00520]
D BSQ88_05180 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BSQ88_06130 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BSQ88_05480 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D BSQ88_04920 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D BSQ88_03315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BSQ88_00910 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D BSQ88_01385 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D BSQ88_06330 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D BSQ88_00320 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BSQ88_00375 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BSQ88_06510 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D BSQ88_06515 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D BSQ88_01800 acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D BSQ88_09440 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D BSQ88_05390 PTS sugar transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D BSQ88_01415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D BSQ88_05965 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BSQ88_02870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BSQ88_05745 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BSQ88_05740 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D BSQ88_05735 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BSQ88_10230 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BSQ88_04290 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D BSQ88_04295 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:fnf00620]
D BSQ88_08030 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_01015 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_03495 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BSQ88_08035 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BSQ88_08040 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BSQ88_06500 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BSQ88_09365 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BSQ88_07385 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_08330 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_07380 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BSQ88_09370 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BSQ88_06315 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D BSQ88_08525 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D BSQ88_01895 FAD-binding oxidoreductase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D BSQ88_00815 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BSQ88_05450 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D BSQ88_05090 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BSQ88_06285 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BSQ88_09185 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D BSQ88_03970 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D BSQ88_03985 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_06965 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_03900 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D BSQ88_03905 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D BSQ88_06610 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:fnf00630]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_04040 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D BSQ88_06305 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D BSQ88_08515 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BSQ88_07220 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D BSQ88_10000 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BSQ88_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism [PATH:fnf00640]
D BSQ88_06315 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D BSQ88_08525 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D BSQ88_08035 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BSQ88_08040 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BSQ88_03495 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BSQ88_03265 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BSQ88_04025 acyl-CoA dehydrogenase K20143 acrC; acrylyl-CoA reductase (NADH) [EC:1.3.1.95]
D BSQ88_08505 2-hydroxyacyl-CoA dehydratase K20626 lcdA; lactoyl-CoA dehydratase subunit alpha [EC:4.2.1.54]
D BSQ88_08500 2-hydroxyacyl-CoA dehydratase K20627 lcdB; lactoyl-CoA dehydratase subunit beta [EC:4.2.1.54]
D BSQ88_09365 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BSQ88_07385 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_08330 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_07380 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BSQ88_09370 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BSQ88_08515 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BSQ88_00815 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:fnf00650]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_09475 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D BSQ88_04010 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D BSQ88_04045 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D BSQ88_09480 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D BSQ88_03265 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BSQ88_01640 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D BSQ88_01645 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D BSQ88_04040 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D BSQ88_06305 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D BSQ88_06950 glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D BSQ88_03985 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_06965 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_06970 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D BSQ88_03975 oxaloacetate decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D BSQ88_06975 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D BSQ88_06960 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D BSQ88_06955 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D BSQ88_08650 iron-containing alcohol dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D BSQ88_08655 acetyl-CoA hydrolase/transferase family protein K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D BSQ88_08665 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D BSQ88_03495 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BSQ88_08030 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_01015 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00660 C5-Branched dibasic acid metabolism
D BSQ88_07220 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
C 00562 Inositol phosphate metabolism
D BSQ88_01485 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:fnf00190]
D BSQ88_00950 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BSQ88_00960 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BSQ88_00955 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BSQ88_00945 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BSQ88_00965 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BSQ88_00930 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BSQ88_00940 atpF; ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BSQ88_00935 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BSQ88_09280 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D BSQ88_09275 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D BSQ88_09290 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D BSQ88_09270 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D BSQ88_09295 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D BSQ88_09285 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D BSQ88_09310 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D BSQ88_09305 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D BSQ88_09300 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:fnf00710]
D BSQ88_08225 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BSQ88_08230 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BSQ88_07650 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BSQ88_06810 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D BSQ88_06605 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BSQ88_09520 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BSQ88_09525 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BSQ88_03820 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D BSQ88_01485 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BSQ88_07575 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BSQ88_06610 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:fnf00720]
D BSQ88_08030 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_01015 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BSQ88_06610 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D BSQ88_03900 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D BSQ88_03905 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D BSQ88_08665 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_09365 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BSQ88_07385 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_08330 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_07380 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BSQ88_09370 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BSQ88_08515 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BSQ88_04200 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D BSQ88_08340 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BSQ88_02000 formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D BSQ88_08040 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BSQ88_08035 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:fnf00680]
D BSQ88_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BSQ88_06495 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BSQ88_07650 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BSQ88_06810 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D BSQ88_06605 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BSQ88_08035 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BSQ88_08040 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BSQ88_00475 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BSQ88_01490 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BSQ88_04135 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:fnf00910]
D BSQ88_02425 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D BSQ88_04720 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D BSQ88_07000 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D BSQ88_05365 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BSQ88_10000 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BSQ88_05515 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:fnf00920]
D BSQ88_01065 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D BSQ88_06405 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D BSQ88_03175 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BSQ88_01265 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:fnf00061]
D BSQ88_09365 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BSQ88_07385 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_08330 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BSQ88_07380 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BSQ88_09370 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BSQ88_01535 acyl carrier protein K02078 acpP; acyl carrier protein
D BSQ88_01530 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BSQ88_01525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BSQ88_01540 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BSQ88_04230 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BSQ88_05855 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BSQ88_06035 DUF561 domain-containing protein K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D BSQ88_04630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_05495 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:fnf00071]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_03265 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BSQ88_04630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_05495 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_09645 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:fnf00074]
D BSQ88_07320 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D BSQ88_01535 acyl carrier protein K02078 acpP; acyl carrier protein
D BSQ88_01530 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:fnf00561]
D BSQ88_03915 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D BSQ88_03920 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D BSQ88_03925 diguanylate cyclase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D BSQ88_03935 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BSQ88_01520 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D BSQ88_05940 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D BSQ88_06110 phosphatase PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D BSQ88_01705 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:fnf00564]
D BSQ88_05935 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BSQ88_03940 FAD/NAD(P)-binding oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D BSQ88_05940 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D BSQ88_06110 phosphatase PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D BSQ88_01705 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D BSQ88_08570 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D BSQ88_09645 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D BSQ88_09615 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BSQ88_03795 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BSQ88_05880 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BSQ88_01960 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D BSQ88_04445 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D BSQ88_03415 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D BSQ88_04180 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:fnf00230]
D BSQ88_00180 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D BSQ88_03625 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D BSQ88_05965 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BSQ88_01390 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BSQ88_05120 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BSQ88_05100 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D BSQ88_05110 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D BSQ88_05135 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D BSQ88_05115 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D BSQ88_05130 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D BSQ88_05125 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D BSQ88_05360 adenylosuccinate lyase family protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BSQ88_05370 adenylosuccinate lyase family protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BSQ88_00900 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BSQ88_05105 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BSQ88_08315 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BSQ88_08620 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D BSQ88_00175 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BSQ88_07560 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D BSQ88_09745 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BSQ88_05825 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D BSQ88_06195 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D BSQ88_06465 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BSQ88_00615 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D BSQ88_08585 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BSQ88_08580 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BSQ88_07645 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D BSQ88_08310 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BSQ88_06845 aroB; 3-dehydroquinate synthase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D BSQ88_04165 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D BSQ88_04365 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BSQ88_04340 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D BSQ88_09815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:fnf00240]
D BSQ88_04530 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BSQ88_04535 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BSQ88_02790 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BSQ88_02810 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D BSQ88_02800 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D BSQ88_02795 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D BSQ88_02815 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D BSQ88_02805 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D BSQ88_09630 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BSQ88_09535 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D BSQ88_04350 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BSQ88_05790 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BSQ88_00255 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D BSQ88_01620 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D BSQ88_04340 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D BSQ88_00260 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D BSQ88_07645 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D BSQ88_08585 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BSQ88_08580 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BSQ88_09980 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D BSQ88_09605 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D BSQ88_00750 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BSQ88_04680 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:fnf00250]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BSQ88_02825 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BSQ88_04935 type I asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D BSQ88_04155 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D BSQ88_03515 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D BSQ88_00785 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BSQ88_00780 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BSQ88_04365 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BSQ88_05360 adenylosuccinate lyase family protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BSQ88_05370 adenylosuccinate lyase family protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BSQ88_00900 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BSQ88_02790 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BSQ88_05515 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D BSQ88_07000 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D BSQ88_05365 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BSQ88_10000 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BSQ88_04530 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BSQ88_04535 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BSQ88_10005 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D BSQ88_03315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BSQ88_05120 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:fnf00260]
D BSQ88_03295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BSQ88_03290 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BSQ88_03300 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D BSQ88_03310 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D BSQ88_03305 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D BSQ88_06270 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D BSQ88_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BSQ88_00475 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BSQ88_01490 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BSQ88_05880 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BSQ88_02470 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D BSQ88_07500 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:fnf00270]
D BSQ88_03175 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BSQ88_04985 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BSQ88_08490 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BSQ88_02340 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BSQ88_02865 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BSQ88_05230 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D BSQ88_09465 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D BSQ88_05205 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D BSQ88_00175 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BSQ88_05210 S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D BSQ88_03895 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D BSQ88_01005 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D BSQ88_10140 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D BSQ88_03295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BSQ88_03290 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BSQ88_03300 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D BSQ88_03310 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D BSQ88_00985 4Fe-4S dicluster domain-containing protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D BSQ88_01265 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D BSQ88_01270 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BSQ88_00815 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BSQ88_02470 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:fnf00280]
D BSQ88_03265 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BSQ88_08515 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis
D BSQ88_07500 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00300 Lysine biosynthesis [PATH:fnf00300]
D BSQ88_03300 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D BSQ88_03295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BSQ88_03290 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BSQ88_07510 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BSQ88_07725 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BSQ88_10105 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BSQ88_00350 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:fnf00310]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_03860 ablA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D BSQ88_03875 D-lysine 5,6-aminomutase subunit alpha K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D BSQ88_03880 hypothetical protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D BSQ88_03855 L-erythro-3,5-diaminohexanoate dehydrogenase K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11]
D BSQ88_03850 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D BSQ88_03845 3-aminobutyryl-CoA ammonia lyase K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14]
D BSQ88_01640 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D BSQ88_01645 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:fnf00220]
D BSQ88_00785 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BSQ88_00780 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BSQ88_10005 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D BSQ88_10000 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BSQ88_04530 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BSQ88_04535 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BSQ88_07000 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D BSQ88_05365 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:fnf00330]
D BSQ88_04725 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:fnf00340]
D BSQ88_03695 histidinol-phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D BSQ88_00100 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D BSQ88_00105 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D BSQ88_01995 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D BSQ88_06855 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D BSQ88_01990 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:fnf00350]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BSQ88_03895 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D BSQ88_03445 tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism [PATH:fnf00360]
D BSQ88_09475 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BSQ88_03895 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00380 Tryptophan metabolism [PATH:fnf00380]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_00510 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:fnf00400]
D BSQ88_00170 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BSQ88_04205 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D BSQ88_04730 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D BSQ88_04225 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D BSQ88_04220 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D BSQ88_04215 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D BSQ88_08335 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BSQ88_03895 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:fnf00410]
D BSQ88_09240 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D BSQ88_03265 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:fnf00430]
D BSQ88_07000 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D BSQ88_08040 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BSQ88_08035 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:fnf00450]
D BSQ88_04985 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BSQ88_08490 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BSQ88_02340 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BSQ88_01005 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D BSQ88_06290 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BSQ88_01455 FAD-binding protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BSQ88_02875 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:fnf00460]
D BSQ88_04935 type I asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D BSQ88_04155 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D BSQ88_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:fnf00470]
D BSQ88_09435 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BSQ88_00720 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BSQ88_00380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BSQ88_10005 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D BSQ88_05085 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BSQ88_00360 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BSQ88_07725 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BSQ88_03875 D-lysine 5,6-aminomutase subunit alpha K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D BSQ88_03880 hypothetical protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D BSQ88_10095 diaminopimelate epimerase K01780 cntK; histidine racemase [EC:5.1.1.24]
C 00480 Glutathione metabolism [PATH:fnf00480]
D BSQ88_05415 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D BSQ88_03060 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BSQ88_05530 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BSQ88_03635 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BSQ88_08560 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:fnf00540]
D BSQ88_05850 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BSQ88_05860 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D BSQ88_07670 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BSQ88_05845 DUF1009 domain-containing protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BSQ88_05840 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BSQ88_02585 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BSQ88_08190 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D BSQ88_10100 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BSQ88_09685 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D BSQ88_06190 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BSQ88_09470 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D BSQ88_07150 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BSQ88_08840 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D BSQ88_00345 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D BSQ88_07455 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D BSQ88_03360 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D BSQ88_00285 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D BSQ88_01710 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D BSQ88_05885 lipopolysaccharide heptosyltransferase family protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:fnf00541]
D BSQ88_02870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BSQ88_05735 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BSQ88_01805 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BSQ88_01820 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BSQ88_01810 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BSQ88_01815 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D BSQ88_01385 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:fnf00550]
D BSQ88_00320 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BSQ88_00375 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BSQ88_00370 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BSQ88_00360 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BSQ88_10105 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BSQ88_00380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BSQ88_00350 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BSQ88_09620 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BSQ88_03355 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BSQ88_00355 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BSQ88_00365 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BSQ88_04670 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BSQ88_08745 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BSQ88_06550 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:fnf00552]
D BSQ88_03355 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:fnf00730]
D BSQ88_01650 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D BSQ88_02545 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D BSQ88_02555 thiF; sulfur carrier protein ThiS adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D BSQ88_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BSQ88_02560 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D BSQ88_07095 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D BSQ88_05275 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BSQ88_08730 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BSQ88_02565 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D BSQ88_02550 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D BSQ88_07570 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BSQ88_02920 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D BSQ88_09815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:fnf00740]
D BSQ88_08535 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D BSQ88_08545 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BSQ88_05155 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D BSQ88_08550 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D BSQ88_08540 ribE; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D BSQ88_05585 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D BSQ88_00180 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D BSQ88_03625 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:fnf00750]
D BSQ88_08790 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D BSQ88_03305 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D BSQ88_09250 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:fnf00760]
D BSQ88_02825 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BSQ88_02820 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D BSQ88_02830 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D BSQ88_01955 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D BSQ88_08620 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D BSQ88_06220 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D BSQ88_08700 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D BSQ88_02345 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D BSQ88_09505 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:fnf00770]
D BSQ88_09225 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D BSQ88_09240 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D BSQ88_07255 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D BSQ88_05560 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D BSQ88_01560 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BSQ88_03425 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BSQ88_07320 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:fnf00780]
D BSQ88_06870 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D BSQ88_01540 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BSQ88_04230 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BSQ88_05855 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BSQ88_06865 DUF452 family protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D BSQ88_06860 pyridoxal phosphate-dependent aminotransferase family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BSQ88_06905 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D BSQ88_06910 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D BSQ88_06915 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D BSQ88_07100 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D BSQ88_06920 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:fnf00790]
D BSQ88_06680 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D BSQ88_08175 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D BSQ88_09570 Nif3-like dinuclear metal center hexameric protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D BSQ88_06675 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D BSQ88_06670 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D BSQ88_09770 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BSQ88_09460 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D BSQ88_08535 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D BSQ88_00800 pabB; aminodeoxychorismate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D BSQ88_00805 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D BSQ88_08165 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BSQ88_08170 queE; putative 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BSQ88_08180 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BSQ88_08185 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:fnf00670]
D BSQ88_09770 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BSQ88_04200 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D BSQ88_08340 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BSQ88_02000 formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D BSQ88_04915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BSQ88_05110 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D BSQ88_05105 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BSQ88_01990 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D BSQ88_08345 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BSQ88_02340 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BSQ88_04680 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:fnf00860]
D BSQ88_07290 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BSQ88_08240 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D BSQ88_08280 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D BSQ88_08275 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D BSQ88_08245 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D BSQ88_08265 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D BSQ88_07080 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D BSQ88_01165 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D BSQ88_01190 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D BSQ88_01170 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D BSQ88_01185 cbiG; cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D BSQ88_01195 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D BSQ88_01145 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D BSQ88_01155 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D BSQ88_01150 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D BSQ88_01140 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D BSQ88_01130 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D BSQ88_02365 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D BSQ88_05605 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BSQ88_08845 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BSQ88_03675 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D BSQ88_01110 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D BSQ88_01120 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D BSQ88_02390 iron dicitrate transporter K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D BSQ88_08140 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D BSQ88_08135 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D BSQ88_08125 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D BSQ88_08130 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D BSQ88_01125 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D BSQ88_02405 VWA domain-containing protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D BSQ88_02400 magnesium chelatase ATPase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:fnf00900]
D BSQ88_05275 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BSQ88_08730 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BSQ88_09610 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D BSQ88_00430 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D BSQ88_10250 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D BSQ88_08835 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D BSQ88_01595 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D BSQ88_09990 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_02630 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D BSQ88_09620 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D BSQ88_09520 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BSQ88_09525 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:fnf00523]
D BSQ88_01805 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BSQ88_01820 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BSQ88_01810 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BSQ88_01815 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:fnf01055]
D BSQ88_05685 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D BSQ88_01820 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:fnf00261]
D BSQ88_05685 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D BSQ88_03295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BSQ88_03290 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:fnf00521]
D BSQ88_01415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D BSQ88_05965 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BSQ88_01805 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BSQ88_01820 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BSQ88_01810 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BSQ88_01815 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D BSQ88_01415 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:fnf00525]
D BSQ88_01805 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BSQ88_01820 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:fnf00401]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BSQ88_03895 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D BSQ88_01530 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BSQ88_04230 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D BSQ88_01535 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D BSQ88_02865 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:fnf00362]
D BSQ88_06950 glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D BSQ88_03985 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_06965 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_06970 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D BSQ88_03975 oxaloacetate decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D BSQ88_06975 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D BSQ88_09475 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D BSQ88_01640 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D BSQ88_01645 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:fnf00643]
D BSQ88_06960 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D BSQ88_06955 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D BSQ88_08505 2-hydroxyacyl-CoA dehydratase K20626 lcdA; lactoyl-CoA dehydratase subunit alpha [EC:4.2.1.54]
D BSQ88_08500 2-hydroxyacyl-CoA dehydratase K20627 lcdB; lactoyl-CoA dehydratase subunit beta [EC:4.2.1.54]
D BSQ88_06315 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D BSQ88_08525 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:fnf03020]
D BSQ88_00600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BSQ88_00605 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BSQ88_09780 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BSQ88_00620 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BSQ88_03015 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:fnf03010]
D BSQ88_09985 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BSQ88_09640 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BSQ88_09900 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BSQ88_09785 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BSQ88_09845 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BSQ88_00400 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BSQ88_01315 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BSQ88_09860 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BSQ88_10010 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BSQ88_09935 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BSQ88_09790 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BSQ88_01310 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BSQ88_09795 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BSQ88_09865 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BSQ88_03090 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BSQ88_02695 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BSQ88_09885 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BSQ88_00405 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BSQ88_09910 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BSQ88_03045 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BSQ88_00585 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BSQ88_09915 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BSQ88_09930 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BSQ88_09925 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BSQ88_09870 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BSQ88_09855 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BSQ88_00595 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BSQ88_03225 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BSQ88_00590 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BSQ88_00580 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BSQ88_10015 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BSQ88_09880 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BSQ88_09835 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BSQ88_09895 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BSQ88_09775 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BSQ88_09850 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BSQ88_00885 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BSQ88_01875 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BSQ88_08825 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BSQ88_09905 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BSQ88_09920 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BSQ88_09875 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BSQ88_08815 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BSQ88_00420 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BSQ88_09890 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BSQ88_09840 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BSQ88_01615 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BSQ88_01515 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BSQ88_00560 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BSQ88_10295 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BSQ88_01870 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BSQ88_09800 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BSQ88_09555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_09325 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_08390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_03520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10225 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10130 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_08385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_03535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_09320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_10210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_09550 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_03540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_10205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_09545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_09315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_08380 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_10125 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:fnf00970]
D BSQ88_10215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BSQ88_03530 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BSQ88_09410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BSQ88_02770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_10045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_04185 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_00215 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_08375 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BSQ88_09540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BSQ88_00460 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BSQ88_06780 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BSQ88_00245 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BSQ88_00470 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BSQ88_05420 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BSQ88_10240 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BSQ88_00490 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BSQ88_06790 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BSQ88_00225 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BSQ88_06800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_09405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_00205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_00145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_00150 tRNA-His K14226 tRNA-His; tRNA His
D BSQ88_03525 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BSQ88_10220 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BSQ88_00160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BSQ88_00195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BSQ88_00535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BSQ88_00210 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BSQ88_00155 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BSQ88_06795 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BSQ88_00220 tRNA-Met K14230 tRNA-Met; tRNA Met
D BSQ88_00200 tRNA-Met K14230 tRNA-Met; tRNA Met
D BSQ88_09415 tRNA-Met K14230 tRNA-Met; tRNA Met
D BSQ88_00235 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BSQ88_00465 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BSQ88_05425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BSQ88_00140 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BSQ88_00230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_08795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_01355 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_01360 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_02215 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_00485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BSQ88_03545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BSQ88_02335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BSQ88_00565 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BSQ88_00495 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BSQ88_00455 tRNA-Val K14237 tRNA-Val; tRNA Val
D BSQ88_06785 tRNA-Val K14237 tRNA-Val; tRNA Val
D BSQ88_00240 tRNA-Val K14237 tRNA-Val; tRNA Val
D BSQ88_07290 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BSQ88_02040 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BSQ88_02045 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BSQ88_02035 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BSQ88_03490 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BSQ88_00700 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BSQ88_06225 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BSQ88_01080 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BSQ88_06690 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BSQ88_06685 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BSQ88_07430 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BSQ88_07660 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BSQ88_00435 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BSQ88_03280 endo alpha-1,4 polygalactosaminidase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D BSQ88_02875 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BSQ88_08345 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BSQ88_07160 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BSQ88_00335 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BSQ88_06700 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BSQ88_03030 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BSQ88_02775 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BSQ88_09165 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BSQ88_06230 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BSQ88_00040 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BSQ88_00045 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BSQ88_06575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BSQ88_01410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:fnf03060]
D BSQ88_09830 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BSQ88_00570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BSQ88_06240 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BSQ88_00710 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D BSQ88_00715 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D BSQ88_09675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BSQ88_10280 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BSQ88_03375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BSQ88_02690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BSQ88_05870 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D BSQ88_08045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BSQ88_00890 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BSQ88_06695 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:fnf04122]
D BSQ88_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BSQ88_02520 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BSQ88_03385 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BSQ88_05380 HesA/MoeB/ThiF family protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D BSQ88_02570 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D BSQ88_02555 thiF; sulfur carrier protein ThiS adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:fnf03018]
D BSQ88_06495 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BSQ88_04435 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BSQ88_09655 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BSQ88_03070 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BSQ88_05915 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BSQ88_01585 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BSQ88_02465 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BSQ88_08740 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BSQ88_09720 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D BSQ88_05985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:fnf03030]
D BSQ88_03505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BSQ88_07390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BSQ88_07525 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D BSQ88_03215 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BSQ88_00450 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BSQ88_01100 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BSQ88_05190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_05925 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_03230 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BSQ88_09020 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BSQ88_09585 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BSQ88_05600 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BSQ88_01465 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BSQ88_03380 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:fnf03410]
D BSQ88_06565 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BSQ88_10110 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BSQ88_06245 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BSQ88_09195 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D BSQ88_07085 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BSQ88_07190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_02995 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_03380 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:fnf03420]
D BSQ88_10260 DEAD/DEAH box helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BSQ88_06180 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D BSQ88_08095 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D BSQ88_09395 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D BSQ88_04665 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BSQ88_05865 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BSQ88_03380 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:fnf03430]
D BSQ88_00685 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BSQ88_00425 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D BSQ88_03870 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2
D BSQ88_03005 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D BSQ88_04665 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BSQ88_05865 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BSQ88_08090 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BSQ88_02625 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BSQ88_07190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_02995 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_05600 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BSQ88_07390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BSQ88_07525 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D BSQ88_05190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_05925 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_03215 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BSQ88_01100 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BSQ88_00450 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BSQ88_03505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BSQ88_03380 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:fnf03440]
D BSQ88_07190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_02995 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_05600 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BSQ88_00015 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BSQ88_08360 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D BSQ88_09350 recR; recombination protein RecR K06187 recR; recombination protein RecR
D BSQ88_00300 recA; recombinase RecA K03553 recA; recombination protein RecA
D BSQ88_06175 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BSQ88_08775 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BSQ88_06275 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BSQ88_06060 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_07040 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_09160 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_01700 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_00850 HTH domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_01180 DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_03145 DeoR family transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_07390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BSQ88_07525 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D BSQ88_05190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_05925 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_03215 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BSQ88_01100 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BSQ88_00450 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BSQ88_03505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BSQ88_06825 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:fnf02010]
D BSQ88_01210 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D BSQ88_01200 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D BSQ88_01205 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D BSQ88_02785 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D BSQ88_01105 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D BSQ88_05195 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BSQ88_05670 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D BSQ88_05675 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D BSQ88_05680 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BSQ88_02420 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D BSQ88_02415 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BSQ88_02850 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D BSQ88_02845 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D BSQ88_05545 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BSQ88_01420 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D BSQ88_01430 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D BSQ88_01425 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D BSQ88_01285 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D BSQ88_01290 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D BSQ88_01295 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D BSQ88_01300 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BSQ88_04140 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D BSQ88_00790 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D BSQ88_04150 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D BSQ88_04145 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D BSQ88_08460 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D BSQ88_08465 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D BSQ88_08470 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D BSQ88_08475 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D BSQ88_08480 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D BSQ88_00865 ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D BSQ88_00870 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D BSQ88_00875 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D BSQ88_04090 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D BSQ88_00835 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D BSQ88_04100 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D BSQ88_00845 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D BSQ88_04095 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D BSQ88_00840 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D BSQ88_08555 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D BSQ88_04815 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D BSQ88_05910 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D BSQ88_05905 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BSQ88_00735 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D BSQ88_00740 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D BSQ88_00695 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BSQ88_09515 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D BSQ88_03435 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BSQ88_04775 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BSQ88_04830 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BSQ88_03440 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BSQ88_04780 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BSQ88_04825 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BSQ88_05030 ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D BSQ88_05035 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:fnf02060]
D BSQ88_05695 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BSQ88_05690 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D BSQ88_09995 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D BSQ88_09440 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D BSQ88_05390 PTS sugar transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D BSQ88_05180 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BSQ88_06130 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BSQ88_06325 PTS glucose transporter subunit IIB K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D BSQ88_05640 alpha-glucoside-specific phosphotransferase enzyme IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D BSQ88_04315 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BSQ88_04310 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D BSQ88_08355 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D BSQ88_03395 CBS domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:fnf03070]
D BSQ88_10195 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D BSQ88_00710 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D BSQ88_00715 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D BSQ88_00570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BSQ88_06240 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BSQ88_09830 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BSQ88_09675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BSQ88_10280 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BSQ88_03375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BSQ88_08045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BSQ88_02690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BSQ88_08155 filamentous hemagglutinin N-terminal domain-containing protein K11016 shlA; hemolysin
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:fnf02020]
D BSQ88_09205 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BSQ88_01275 GHKL domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BSQ88_09200 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D BSQ88_01285 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D BSQ88_05500 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D BSQ88_09210 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D BSQ88_09215 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D BSQ88_09220 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D BSQ88_03990 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D BSQ88_03995 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D BSQ88_04000 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D BSQ88_09185 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D BSQ88_10000 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BSQ88_01640 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D BSQ88_01645 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D BSQ88_01635 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_08675 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D BSQ88_10005 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D BSQ88_02960 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D BSQ88_02955 response regulator K07720 yesN; two-component system, response regulator YesN
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:fnf02024]
D BSQ88_08460 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D BSQ88_08465 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D BSQ88_08470 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D BSQ88_08475 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D BSQ88_08480 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D BSQ88_04630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_05495 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_08545 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BSQ88_02050 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_03100 glutathione ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_05150 DNA-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_05255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_05350 DNA-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_06030 DNA-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_06100 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_07280 diguanylate phosphodiesterase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_06880 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_01945 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_04610 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_02055 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_03105 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_05250 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_05345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_06025 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_07275 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_01940 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_02060 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_05245 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_05340 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_06020 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_07270 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_03110 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_03115 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_05240 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_05335 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_06015 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_02065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_01930 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_07265 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_03120 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D BSQ88_02070 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D BSQ88_10280 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BSQ88_00570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BSQ88_06240 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BSQ88_09830 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BSQ88_09675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BSQ88_03375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BSQ88_08045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BSQ88_02690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D BSQ88_01420 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:fnf02040]
D BSQ88_05930 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_06370 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_09580 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_09575 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_08675 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BSQ88_06495 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:fnf04980]
D BSQ88_05605 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BSQ88_02340 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:fnf01501]
D BSQ88_05770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D BSQ88_04670 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BSQ88_08745 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:fnf01502]
D BSQ88_00380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BSQ88_09435 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BSQ88_00720 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BSQ88_00350 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BSQ88_00355 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BSQ88_00365 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:fnf01503]
D BSQ88_09670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BSQ88_05770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D BSQ88_05850 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:fnf01000]
C 01001 Protein kinases [BR:fnf01001]
D BSQ88_07565 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BSQ88_02455 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D BSQ88_09205 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BSQ88_01275 GHKL domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BSQ88_10030 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D BSQ88_02960 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:fnf01009]
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BSQ88_01680 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:fnf01002]
D BSQ88_06695 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BSQ88_06465 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BSQ88_05810 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D BSQ88_06760 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D BSQ88_05120 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BSQ88_03315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BSQ88_04410 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D BSQ88_03810 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D BSQ88_04880 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D BSQ88_04960 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D BSQ88_04955 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D BSQ88_02895 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D BSQ88_07985 M15 family peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D BSQ88_01825 M15 family peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D BSQ88_02320 M15 family peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D BSQ88_03060 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BSQ88_07510 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BSQ88_07710 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D BSQ88_05530 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BSQ88_03635 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BSQ88_09810 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BSQ88_06065 peptidase M24 family protein K14213 PEPD; Xaa-Pro dipeptidase [EC:3.4.13.9]
D BSQ88_03320 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BSQ88_09170 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D BSQ88_05470 beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D BSQ88_03085 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BSQ88_08810 protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D BSQ88_09600 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D BSQ88_06550 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BSQ88_07180 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BSQ88_07890 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BSQ88_07170 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BSQ88_10060 helix-turn-helix domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D BSQ88_00890 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BSQ88_08715 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BSQ88_02890 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D BSQ88_03235 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D BSQ88_03420 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D BSQ88_03955 ecotin K08276 eco; ecotin
C 01003 Glycosyltransferases [BR:fnf01003]
D BSQ88_04300 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D BSQ88_04670 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:fnf01005]
D BSQ88_05850 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BSQ88_05840 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BSQ88_05860 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D BSQ88_07670 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BSQ88_05845 DUF1009 domain-containing protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BSQ88_02585 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BSQ88_09470 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D BSQ88_10100 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BSQ88_06190 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BSQ88_09685 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D BSQ88_08190 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D BSQ88_08840 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D BSQ88_07455 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D BSQ88_00285 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D BSQ88_05885 lipopolysaccharide heptosyltransferase family protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D BSQ88_01710 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D BSQ88_07150 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BSQ88_00345 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D BSQ88_03360 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:fnf01011]
D BSQ88_00320 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BSQ88_00375 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BSQ88_00370 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BSQ88_00360 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BSQ88_10105 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BSQ88_00380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BSQ88_09435 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BSQ88_00720 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BSQ88_05085 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BSQ88_00355 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BSQ88_00365 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BSQ88_03355 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BSQ88_05575 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D BSQ88_04670 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BSQ88_08745 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BSQ88_06550 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BSQ88_07985 M15 family peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D BSQ88_01825 M15 family peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D BSQ88_02320 M15 family peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D BSQ88_03075 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D BSQ88_06185 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D BSQ88_09670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:fnf01004]
D BSQ88_01530 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BSQ88_01525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BSQ88_01540 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BSQ88_04230 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BSQ88_05855 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BSQ88_06035 DUF561 domain-containing protein K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D BSQ88_04630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_05495 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_01520 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D BSQ88_05940 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins [BR:fnf01008]
D BSQ88_05685 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:fnf01006]
D BSQ88_02630 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D BSQ88_09620 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BSQ88_02445 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:fnf01007]
D BSQ88_07290 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BSQ88_06575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BSQ88_01410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BSQ88_00435 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BSQ88_02775 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BSQ88_02875 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BSQ88_06700 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BSQ88_07160 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BSQ88_00335 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BSQ88_03030 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BSQ88_06225 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BSQ88_01080 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BSQ88_06230 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BSQ88_06690 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BSQ88_06685 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BSQ88_07660 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BSQ88_09165 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BSQ88_07430 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BSQ88_03490 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BSQ88_00700 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BSQ88_00040 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BSQ88_00045 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BSQ88_03280 endo alpha-1,4 polygalactosaminidase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D BSQ88_03345 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BSQ88_03895 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D BSQ88_06860 pyridoxal phosphate-dependent aminotransferase family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BSQ88_04985 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BSQ88_08490 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BSQ88_06905 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D BSQ88_08280 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:fnf00194]
D BSQ88_00965 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BSQ88_00960 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BSQ88_00955 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BSQ88_00950 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BSQ88_00945 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BSQ88_00940 atpF; ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BSQ88_00935 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BSQ88_00930 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:fnf03000]
D BSQ88_04305 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D BSQ88_06615 CBS domain-containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D BSQ88_06535 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BSQ88_05655 UTRA domain-containing protein K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D BSQ88_01885 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BSQ88_01260 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BSQ88_01880 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BSQ88_09245 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BSQ88_08565 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D BSQ88_05280 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D BSQ88_09950 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D BSQ88_05525 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D BSQ88_08770 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D BSQ88_06010 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D BSQ88_04925 MurR/RpiR family transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D BSQ88_06920 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BSQ88_01055 AAA family ATPase K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D BSQ88_04005 PAS domain S-box protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D BSQ88_06410 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D BSQ88_03705 transcriptional regulator K07727 K07727; putative transcriptional regulator
D BSQ88_02105 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D BSQ88_06980 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator
D BSQ88_05995 metal-sensitive transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D BSQ88_03910 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D BSQ88_09730 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D BSQ88_08350 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:fnf03021]
D BSQ88_09780 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BSQ88_00600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BSQ88_00605 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BSQ88_03015 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D BSQ88_00620 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BSQ88_05930 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_06370 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_09580 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_09575 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D BSQ88_00330 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D BSQ88_08675 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D BSQ88_07210 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D BSQ88_07360 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BSQ88_00575 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D BSQ88_09390 serine/threonine protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D BSQ88_02460 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D BSQ88_02455 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D BSQ88_01585 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:fnf03019]
D BSQ88_01555 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D BSQ88_01545 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BSQ88_08740 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D BSQ88_02465 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BSQ88_09655 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BSQ88_03070 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BSQ88_05915 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BSQ88_06495 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BSQ88_04435 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BSQ88_01585 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BSQ88_09360 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BSQ88_09720 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D BSQ88_05985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BSQ88_09400 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:fnf03011]
D BSQ88_09985 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BSQ88_09640 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BSQ88_09900 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BSQ88_09785 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BSQ88_09845 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BSQ88_00400 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BSQ88_01315 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BSQ88_09860 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BSQ88_10010 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BSQ88_09935 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BSQ88_09790 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BSQ88_01310 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BSQ88_09795 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BSQ88_09865 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BSQ88_03090 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BSQ88_02695 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BSQ88_09885 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BSQ88_00405 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BSQ88_09910 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BSQ88_03045 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BSQ88_00585 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BSQ88_09915 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BSQ88_09930 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BSQ88_09925 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BSQ88_09870 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BSQ88_09855 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BSQ88_03225 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BSQ88_00590 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BSQ88_00580 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BSQ88_00595 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BSQ88_10015 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BSQ88_09880 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BSQ88_09835 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BSQ88_09895 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BSQ88_09775 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BSQ88_09850 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BSQ88_00885 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BSQ88_01875 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BSQ88_08825 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BSQ88_09905 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BSQ88_09920 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BSQ88_09875 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BSQ88_08815 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BSQ88_00420 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BSQ88_09890 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BSQ88_09840 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BSQ88_01615 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BSQ88_01515 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BSQ88_00560 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BSQ88_10295 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BSQ88_01870 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BSQ88_09800 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BSQ88_03540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_10205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_09545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_09315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_08380 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_10125 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_09555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_09325 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_08390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_03520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10225 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10130 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_08385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_03535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_09320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_10210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_09550 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:fnf03009]
D BSQ88_01545 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BSQ88_09490 GTPase Era K03595 era; GTPase
D BSQ88_02440 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D BSQ88_07210 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D BSQ88_07360 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BSQ88_00575 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D BSQ88_02650 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D BSQ88_07555 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BSQ88_01350 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D BSQ88_02615 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BSQ88_08765 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BSQ88_07690 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BSQ88_04455 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BSQ88_08710 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BSQ88_08720 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BSQ88_00325 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BSQ88_03010 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BSQ88_00725 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BSQ88_04675 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BSQ88_02030 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BSQ88_00760 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BSQ88_08235 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BSQ88_01460 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BSQ88_00895 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D BSQ88_07540 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D BSQ88_04440 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D BSQ88_04345 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D BSQ88_01555 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D BSQ88_00705 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D BSQ88_00440 Mini-ribonuclease 3-like protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D BSQ88_03070 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BSQ88_07570 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BSQ88_08610 ribosome biogenesis GTPase Der K03977 engA; GTPase
D BSQ88_08705 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D BSQ88_07630 hflX; GTPase HflX K03665 hflX; GTPase
D BSQ88_08060 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D BSQ88_01395 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BSQ88_08310 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BSQ88_07195 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D BSQ88_07215 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D BSQ88_00010 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D BSQ88_06115 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D BSQ88_08735 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D BSQ88_05900 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D BSQ88_01510 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:fnf03016]
D BSQ88_06210 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D BSQ88_07290 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BSQ88_09165 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BSQ88_06700 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BSQ88_00335 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BSQ88_02875 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BSQ88_02775 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BSQ88_03030 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BSQ88_06225 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BSQ88_03490 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BSQ88_00700 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BSQ88_01080 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BSQ88_07430 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BSQ88_07660 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BSQ88_00435 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BSQ88_07160 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BSQ88_06230 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BSQ88_00040 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BSQ88_00045 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BSQ88_06575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BSQ88_01410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BSQ88_01950 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D BSQ88_03825 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BSQ88_04360 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D BSQ88_09960 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BSQ88_04980 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BSQ88_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BSQ88_01395 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BSQ88_02445 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BSQ88_10270 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BSQ88_10265 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BSQ88_07695 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BSQ88_10290 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D BSQ88_09560 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D BSQ88_05830 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D BSQ88_06690 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BSQ88_06685 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BSQ88_03280 endo alpha-1,4 polygalactosaminidase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D BSQ88_08295 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D BSQ88_00680 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D BSQ88_01580 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D BSQ88_08760 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D BSQ88_08270 methyltransferase domain-containing protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D BSQ88_08070 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D BSQ88_07535 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BSQ88_06280 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D BSQ88_05185 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D BSQ88_02520 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BSQ88_03385 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BSQ88_05505 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D BSQ88_05510 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D BSQ88_02635 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BSQ88_08180 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BSQ88_08165 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BSQ88_08170 queE; putative 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BSQ88_08185 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D BSQ88_04650 recombinase K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D BSQ88_08305 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BSQ88_03080 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BSQ88_07445 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BSQ88_00310 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BSQ88_07450 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BSQ88_08625 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D BSQ88_06265 nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D BSQ88_09655 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BSQ88_04435 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:fnf03012]
D BSQ88_07200 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BSQ88_01865 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BSQ88_01220 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D BSQ88_09635 elongation factor Ts K02357 tsf; elongation factor Ts
D BSQ88_00500 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BSQ88_01325 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BSQ88_06070 fusA; elongation factor G K02355 fusA; elongation factor G
D BSQ88_01320 fusA; elongation factor G K02355 fusA; elongation factor G
D BSQ88_02605 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D BSQ88_09625 ribosome recycling factor K02838 frr; ribosome recycling factor
D BSQ88_02610 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BSQ88_00050 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BSQ88_09805 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BSQ88_02665 efp; elongation factor P K02356 efp; elongation factor P
D BSQ88_07310 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:fnf03110]
D BSQ88_03645 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D BSQ88_07175 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BSQ88_01680 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D BSQ88_09720 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D BSQ88_05985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BSQ88_09680 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BSQ88_07330 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D BSQ88_09725 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D BSQ88_05990 co-chaperone GroES K04078 groES; chaperonin GroES
D BSQ88_03085 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BSQ88_00930 atpB; ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BSQ88_02620 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D BSQ88_05665 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D BSQ88_09590 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D BSQ88_03815 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D BSQ88_06665 trxA; thioredoxin K03671 TXN; thioredoxin
D BSQ88_07440 thiol reductase thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:fnf04131]
D BSQ88_08230 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BSQ88_00475 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BSQ88_06500 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BSQ88_01680 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:fnf03051]
D BSQ88_01680 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:fnf03032]
D BSQ88_04335 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D BSQ88_05140 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D BSQ88_03230 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BSQ88_09020 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BSQ88_07855 AAA family ATPase K02315 dnaC; DNA replication protein DnaC
D BSQ88_09585 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BSQ88_05600 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BSQ88_07390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BSQ88_07525 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D BSQ88_05190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_05925 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_01100 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BSQ88_00450 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BSQ88_03505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BSQ88_03215 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BSQ88_01465 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BSQ88_03380 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BSQ88_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BSQ88_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BSQ88_08075 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:fnf03036]
D BSQ88_01545 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BSQ88_04335 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D BSQ88_05140 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D BSQ88_09420 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D BSQ88_02580 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D BSQ88_05580 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D BSQ88_02025 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D BSQ88_00390 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BSQ88_00385 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D BSQ88_01090 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D BSQ88_09515 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D BSQ88_00395 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BSQ88_09670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BSQ88_05770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D BSQ88_08405 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D BSQ88_08400 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D BSQ88_08395 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D BSQ88_05950 DUF552 domain-containing protein K09772 sepF; cell division inhibitor SepF
D BSQ88_01060 DUF552 domain-containing protein K09772 sepF; cell division inhibitor SepF
D BSQ88_02015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BSQ88_00445 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BSQ88_08370 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D BSQ88_00755 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D BSQ88_10265 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BSQ88_07695 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BSQ88_07690 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BSQ88_08070 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D BSQ88_04130 integrase K04763 xerD; integrase/recombinase XerD
D BSQ88_08065 recombinase XerD K04763 xerD; integrase/recombinase XerD
D BSQ88_07045 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D BSQ88_03160 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D BSQ88_07165 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D BSQ88_05590 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:fnf03400]
D BSQ88_07110 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D BSQ88_10110 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BSQ88_06245 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BSQ88_06565 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BSQ88_06215 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D BSQ88_07240 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D BSQ88_00750 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BSQ88_09195 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D BSQ88_07085 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BSQ88_07190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_02995 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BSQ88_03380 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BSQ88_06180 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D BSQ88_08095 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D BSQ88_09395 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D BSQ88_04665 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BSQ88_05865 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BSQ88_00600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BSQ88_00605 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BSQ88_09780 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BSQ88_03015 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D BSQ88_00620 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BSQ88_10260 DEAD/DEAH box helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BSQ88_00685 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BSQ88_00425 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D BSQ88_03870 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2
D BSQ88_03005 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D BSQ88_08090 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BSQ88_02625 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BSQ88_07390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BSQ88_07525 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D BSQ88_05190 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_05925 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BSQ88_01100 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BSQ88_00450 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BSQ88_03505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BSQ88_03215 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BSQ88_05600 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BSQ88_00300 recA; recombinase RecA K03553 recA; recombination protein RecA
D BSQ88_06175 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BSQ88_08775 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BSQ88_06275 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BSQ88_06825 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BSQ88_04655 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D BSQ88_04660 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D BSQ88_01565 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D BSQ88_00015 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BSQ88_06060 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_07040 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_09160 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_01700 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_00850 HTH domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_01180 DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_03145 DeoR family transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BSQ88_08360 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D BSQ88_09350 recR; recombination protein RecR K06187 recR; recombination protein RecR
D BSQ88_09500 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D BSQ88_02755 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D BSQ88_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BSQ88_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BSQ88_08075 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BSQ88_04335 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D BSQ88_05140 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D BSQ88_05915 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BSQ88_10060 helix-turn-helix domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D BSQ88_00305 regulatory protein RecX K03565 recX; regulatory protein
D BSQ88_06125 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D BSQ88_08585 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BSQ88_08580 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BSQ88_01065 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:fnf03029]
D BSQ88_07200 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BSQ88_01865 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BSQ88_09635 elongation factor Ts K02357 tsf; elongation factor Ts
D BSQ88_00500 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BSQ88_01325 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BSQ88_06070 fusA; elongation factor G K02355 fusA; elongation factor G
D BSQ88_01320 fusA; elongation factor G K02355 fusA; elongation factor G
D BSQ88_09490 GTPase Era K03595 era; GTPase
D BSQ88_06575 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BSQ88_00335 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BSQ88_06225 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BSQ88_02775 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BSQ88_02040 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BSQ88_02045 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BSQ88_02035 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BSQ88_05600 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BSQ88_07680 outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D BSQ88_09720 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D BSQ88_09725 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D BSQ88_05985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BSQ88_05990 co-chaperone GroES K04078 groES; chaperonin GroES
D BSQ88_09680 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BSQ88_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BSQ88_10280 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BSQ88_06895 prohibitin family protein K17081 PHB2; prohibitin 2
D BSQ88_01680 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:fnf02000]
D BSQ88_03435 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BSQ88_04775 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BSQ88_04830 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BSQ88_03440 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BSQ88_04780 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BSQ88_04825 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BSQ88_05445 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D BSQ88_05835 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D BSQ88_05030 ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D BSQ88_05035 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D BSQ88_01210 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D BSQ88_01200 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D BSQ88_01205 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D BSQ88_02785 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D BSQ88_01105 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D BSQ88_05195 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BSQ88_05670 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D BSQ88_05675 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D BSQ88_05680 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BSQ88_02420 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D BSQ88_02415 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BSQ88_02850 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D BSQ88_02845 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D BSQ88_05325 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D BSQ88_07620 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D BSQ88_07615 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D BSQ88_05315 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D BSQ88_07610 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D BSQ88_05545 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BSQ88_01420 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D BSQ88_01430 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D BSQ88_01425 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D BSQ88_00645 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D BSQ88_00650 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D BSQ88_00640 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BSQ88_01285 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D BSQ88_01290 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D BSQ88_01295 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D BSQ88_01300 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BSQ88_04140 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D BSQ88_00790 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D BSQ88_04150 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D BSQ88_04145 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D BSQ88_08460 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D BSQ88_08465 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D BSQ88_08470 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D BSQ88_08475 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D BSQ88_08480 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D BSQ88_00865 ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D BSQ88_00870 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D BSQ88_00875 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D BSQ88_09345 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D BSQ88_09340 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D BSQ88_09335 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D BSQ88_02050 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_03100 glutathione ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_05150 DNA-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_05255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_05350 DNA-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_06030 DNA-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_06100 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_07280 diguanylate phosphodiesterase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_06880 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_01945 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_04610 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BSQ88_02055 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_03105 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_05250 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_05345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_06025 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_07275 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_01940 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BSQ88_02060 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_05245 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_05340 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_06020 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_07270 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_03110 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BSQ88_03115 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_05240 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_05335 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_06015 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_02065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_01930 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_07265 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BSQ88_03120 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D BSQ88_02070 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D BSQ88_05050 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D BSQ88_05300 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D BSQ88_08010 FMN-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D BSQ88_09265 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D BSQ88_05045 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D BSQ88_05295 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D BSQ88_08005 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D BSQ88_09260 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D BSQ88_05040 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D BSQ88_08000 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D BSQ88_09255 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D BSQ88_05290 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D BSQ88_07405 hemin receptor K25034 btuF; cobalamin transport system substrate-binding protein
D BSQ88_02375 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D BSQ88_02380 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D BSQ88_07415 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D BSQ88_07420 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D BSQ88_02385 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D BSQ88_04090 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D BSQ88_00835 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D BSQ88_04100 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D BSQ88_00845 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D BSQ88_04095 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D BSQ88_00840 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D BSQ88_08555 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D BSQ88_04820 Trep_Strep domain-containing protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D BSQ88_04815 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D BSQ88_04810 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D BSQ88_00735 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D BSQ88_00740 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D BSQ88_00695 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BSQ88_05910 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D BSQ88_05905 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BSQ88_09515 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D BSQ88_04545 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BSQ88_04550 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BSQ88_04570 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BSQ88_06150 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BSQ88_04555 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BSQ88_04575 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BSQ88_06155 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BSQ88_04695 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D BSQ88_07635 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D BSQ88_05385 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D BSQ88_03350 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D BSQ88_09150 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D BSQ88_05430 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D BSQ88_08450 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D BSQ88_04490 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D BSQ88_07715 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D BSQ88_05695 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BSQ88_05690 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D BSQ88_09995 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D BSQ88_05180 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BSQ88_09440 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D BSQ88_05390 PTS sugar transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D BSQ88_06130 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BSQ88_06325 PTS glucose transporter subunit IIB K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D BSQ88_05640 alpha-glucoside-specific phosphotransferase enzyme IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D BSQ88_04315 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BSQ88_08355 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D BSQ88_03395 CBS domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D BSQ88_03925 diguanylate cyclase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D BSQ88_03930 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D BSQ88_02525 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D BSQ88_09750 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D BSQ88_01345 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D BSQ88_03195 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D BSQ88_04595 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D BSQ88_06740 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D BSQ88_03200 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D BSQ88_04600 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D BSQ88_06735 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR
D BSQ88_00530 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D BSQ88_08325 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BSQ88_05700 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BSQ88_06600 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D BSQ88_04585 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D BSQ88_02370 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BSQ88_04800 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BSQ88_05020 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BSQ88_07140 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BSQ88_07410 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BSQ88_07680 outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D BSQ88_05485 adhesin K21449 ata; trimeric autotransporter adhesin
D BSQ88_06080 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BSQ88_06300 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BSQ88_09700 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BSQ88_04320 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BSQ88_07305 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BSQ88_07015 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BSQ88_00120 hypothetical protein K19233 btaF; ECM component-binding autotransporter adhesin
D BSQ88_01985 sodium:proton antiporter K07084 yuiF; putative amino acid transporter
D BSQ88_08195 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D BSQ88_01890 L-lactate permease K03303 lutP; lactate permease
D BSQ88_07245 panF; sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter
D BSQ88_00520 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D BSQ88_04065 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D BSQ88_06945 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D BSQ88_06990 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D BSQ88_08020 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D BSQ88_07025 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D BSQ88_08680 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D BSQ88_01920 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D BSQ88_02985 Na+/H+ antiporter NhaC family protein K03315 nhaC; Na+:H+ antiporter, NhaC family
D BSQ88_01495 Na+/H+ antiporter NhaC family protein K03315 nhaC; Na+:H+ antiporter, NhaC family
D BSQ88_06205 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D BSQ88_06655 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D BSQ88_07705 potassium transporter KtrB K03498 trkH; trk/ktr system potassium uptake protein
D BSQ88_06650 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D BSQ88_07700 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D BSQ88_02900 uracil-xanthine permease K02824 uraA; uracil permease
D BSQ88_00765 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D BSQ88_07720 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D BSQ88_04370 chromate transporter K07240 chrA; chromate transporter
D BSQ88_04375 chromate transporter K07240 chrA; chromate transporter
D BSQ88_05550 chromate transporter K07240 chrA; chromate transporter
D BSQ88_05555 chromate transporter K07240 chrA; chromate transporter
D BSQ88_06525 TRAP transporter large permease subunit K21393 yiaN; TRAP-type transport system large permease protein
D BSQ88_00545 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D BSQ88_06530 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D BSQ88_07495 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D BSQ88_05575 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D BSQ88_03260 AEC family transporter K24180 mleP; malate permease and related proteins
D BSQ88_08215 AEC family transporter K24180 mleP; malate permease and related proteins
D BSQ88_05080 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D BSQ88_09210 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D BSQ88_09215 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D BSQ88_09220 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D BSQ88_01095 VUT family protein K09125 yhhQ; queuosine precursor transporter
D BSQ88_01090 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D BSQ88_04615 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D BSQ88_04620 hypothetical protein K07230 p19; periplasmic iron binding protein
D BSQ88_02915 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D BSQ88_03205 energy transducer TonB K03832 tonB; periplasmic protein TonB
D BSQ88_04605 energy transducer TonB K03832 tonB; periplasmic protein TonB
D BSQ88_06730 energy transducer TonB K03832 tonB; periplasmic protein TonB
D BSQ88_00630 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D BSQ88_03985 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_06965 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BSQ88_03970 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D BSQ88_06970 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D BSQ88_03975 oxaloacetate decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D BSQ88_06975 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D BSQ88_06950 glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D BSQ88_02940 cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D BSQ88_05770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D BSQ88_00525 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D BSQ88_04945 MipA/OmpV family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:fnf02044]
D BSQ88_10195 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D BSQ88_10190 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D BSQ88_07345 twitching motility protein K02669 pilT; twitching motility protein PilT
D BSQ88_04450 YggT family protein K02221 yggT; YggT family protein
D BSQ88_07335 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D BSQ88_09980 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D BSQ88_06255 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D BSQ88_08155 filamentous hemagglutinin N-terminal domain-containing protein K11016 shlA; hemolysin
D BSQ88_03375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BSQ88_00710 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D BSQ88_00570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BSQ88_00715 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D BSQ88_06240 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BSQ88_09830 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BSQ88_02690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BSQ88_08045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BSQ88_09675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BSQ88_10280 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:fnf02042]
D BSQ88_08325 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BSQ88_05700 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BSQ88_08155 filamentous hemagglutinin N-terminal domain-containing protein K11016 shlA; hemolysin
D BSQ88_03335 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:fnf02022]
D BSQ88_09205 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BSQ88_01275 GHKL domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BSQ88_09200 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D BSQ88_05500 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D BSQ88_10030 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D BSQ88_10025 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D BSQ88_02960 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D BSQ88_02955 response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:fnf02035]
D BSQ88_07345 twitching motility protein K02669 pilT; twitching motility protein PilT
D BSQ88_10190 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:fnf04812]
D BSQ88_02015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BSQ88_00445 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BSQ88_00395 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BSQ88_00390 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BSQ88_08405 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D BSQ88_08400 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D BSQ88_08395 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
C 04147 Exosome [BR:fnf04147]
D BSQ88_01680 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D BSQ88_06495 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BSQ88_08230 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BSQ88_08225 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BSQ88_06500 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BSQ88_05985 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BSQ88_09720 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D BSQ88_10230 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BSQ88_09745 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BSQ88_00500 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BSQ88_01325 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BSQ88_03825 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BSQ88_00815 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BSQ88_04630 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_05495 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BSQ88_04235 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BSQ88_09815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BSQ88_08315 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BSQ88_00780 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BSQ88_00785 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BSQ88_05745 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BSQ88_04285 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D BSQ88_03935 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BSQ88_10000 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BSQ88_08275 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D BSQ88_05105 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BSQ88_03040 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D BSQ88_03275 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D BSQ88_04035 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D BSQ88_01910 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D BSQ88_01250 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D BSQ88_05365 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BSQ88_06895 prohibitin family protein K17081 PHB2; prohibitin 2
D BSQ88_01485 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BSQ88_00475 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:fnf02048]
D BSQ88_02755 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D BSQ88_02760 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D BSQ88_02745 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D BSQ88_02730 cas8a1; type I CRISPR-associated protein Cas8a1/Csx8 K19088 cst1; CRISPR-associated protein Cst1
D BSQ88_02735 cas7i; type I-B CRISPR-associated protein Cas7/Cst2/DevR K19075 cst2; CRISPR-associated protein Cst2
D BSQ88_02750 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D BSQ88_02740 cas5; CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t
D BSQ88_02725 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D BSQ88_07075 type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D BSQ88_07065 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D BSQ88_07070 SAM-dependent methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D BSQ88_05570 methyltransferase domain-containing protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D BSQ88_04075 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D BSQ88_07130 addiction module toxin RelE K06218 relE; mRNA interferase RelE/StbE
D BSQ88_08855 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D BSQ88_01690 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D BSQ88_10090 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D BSQ88_10085 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D BSQ88_01025 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D BSQ88_01030 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D BSQ88_04885 signal recognition particle K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
D BSQ88_00395 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BSQ88_02015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BSQ88_00445 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BSQ88_07290 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BSQ88_06560 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BSQ88_06380 hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:fnf01504]
D BSQ88_05500 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D BSQ88_05770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:fnf00536]
D BSQ88_07475 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:fnf03100]
D BSQ88_10215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BSQ88_03530 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BSQ88_09410 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BSQ88_02770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_10045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_04185 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_00215 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BSQ88_08375 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BSQ88_09540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BSQ88_00460 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BSQ88_06780 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BSQ88_00245 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BSQ88_00470 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BSQ88_05420 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BSQ88_10240 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BSQ88_00490 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BSQ88_06790 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BSQ88_00225 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BSQ88_06800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_09405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_00205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_00145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BSQ88_00150 tRNA-His K14226 tRNA-His; tRNA His
D BSQ88_03525 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BSQ88_10220 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BSQ88_00160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BSQ88_00195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BSQ88_00535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BSQ88_00210 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BSQ88_00155 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BSQ88_06795 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BSQ88_00220 tRNA-Met K14230 tRNA-Met; tRNA Met
D BSQ88_00200 tRNA-Met K14230 tRNA-Met; tRNA Met
D BSQ88_09415 tRNA-Met K14230 tRNA-Met; tRNA Met
D BSQ88_00235 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BSQ88_00465 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BSQ88_05425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BSQ88_00140 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BSQ88_00230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_08795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_01355 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_01360 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_02215 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BSQ88_00485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BSQ88_03545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BSQ88_02335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BSQ88_00565 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BSQ88_00495 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BSQ88_00455 tRNA-Val K14237 tRNA-Val; tRNA Val
D BSQ88_06785 tRNA-Val K14237 tRNA-Val; tRNA Val
D BSQ88_00240 tRNA-Val K14237 tRNA-Val; tRNA Val
D BSQ88_09555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_09325 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_08390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_03520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10225 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BSQ88_10130 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_08385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_03535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_09320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_10210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_09550 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BSQ88_03540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_10205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_09545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_09315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_08380 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_10125 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BSQ88_05870 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D BSQ88_09560 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D BSQ88_09145 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BSQ88_05270 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D BSQ88_06995 lactate dehydrogenase K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D BSQ88_08200 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D BSQ88_05455 dihydrolipoamide dehydrogenase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D BSQ88_02950 msrB; peptide-methionine (R)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D BSQ88_01450 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D BSQ88_02970 NADH-quinone oxidoreductase subunit NuoF K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D BSQ88_02975 NADH:ubiquinone oxidoreductase K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D BSQ88_09945 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D BSQ88_05460 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D BSQ88_07640 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D BSQ88_03500 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D BSQ88_01975 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D BSQ88_02980 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BSQ88_00625 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D BSQ88_08205 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D BSQ88_03400 DegV family EDD domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D BSQ88_02160 hypothetical protein K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D BSQ88_01570 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D BSQ88_04485 phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D BSQ88_09450 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D BSQ88_04515 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D BSQ88_02905 dihydrolipoamide acyltransferase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D BSQ88_03365 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D BSQ88_06120 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D BSQ88_07325 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BSQ88_01070 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D BSQ88_01035 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D BSQ88_06820 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BSQ88_08290 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D BSQ88_06935 2-hydroxyacyl-CoA dehydratase subunit D K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167]
D BSQ88_06930 2-hydroxyacyl-CoA dehydratase subunit D K20904 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta [EC:4.2.1.167]
D BSQ88_01050 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D BSQ88_06540 cyclically-permuted mutarotase family protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D BSQ88_06940 2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D BSQ88_08510 2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D BSQ88_05055 hypothetical protein K24411 patD; oxazoline/thiazoline synthase [EC:6.2.2.2 6.2.2.3]
D BSQ88_00060 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D BSQ88_00055 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D BSQ88_00080 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D BSQ88_06890 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D BSQ88_03340 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D BSQ88_08420 heavy metal translocating P-type ATPase K12950 ctpC; manganese-transporting P-type ATPase C [EC:7.2.2.22]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D BSQ88_00065 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D BSQ88_00070 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D BSQ88_00075 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D BSQ88_06555 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D BSQ88_08100 flavodoxin K03839 fldA; flavodoxin I
D BSQ88_08630 flavodoxin K03839 fldA; flavodoxin I
D BSQ88_03035 electron transfer flavoprotein K03521 fixA; electron transfer flavoprotein beta subunit
D BSQ88_03270 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D BSQ88_01255 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D BSQ88_05955 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D BSQ88_03480 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D BSQ88_05815 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D BSQ88_08445 cold-shock protein K03704 cspA; cold shock protein
D BSQ88_09755 cold shock domain-containing protein K03704 cspA; cold shock protein
D BSQ88_06710 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D BSQ88_07185 tig; trigger factor K03545 tig; trigger factor
D BSQ88_09650 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D BSQ88_07350 ATP-binding protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D BSQ88_02595 ribonuclease HI K06993 K06993; ribonuclease H-related protein
D BSQ88_08120 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D BSQ88_00990 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D BSQ88_01470 YraN family protein K07460 yraN; putative endonuclease
D BSQ88_00190 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D BSQ88_05920 DNA-processing protein DprA K04096 smf; DNA processing protein
D BSQ88_08080 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D BSQ88_02220 terminase small subunit K07474 xtmA; phage terminase small subunit
D BSQ88_06235 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D BSQ88_02185 virulence-associated protein E K06919 K06919; putative DNA primase/helicase
D BSQ88_03150 IS3 family transposase K07483 K07483; transposase
D BSQ88_06345 ISL3 family transposase K07485 K07485; transposase
D BSQ88_06350 ISL3 family transposase K07485 K07485; transposase
D BSQ88_06635 ISL3 family transposase K07485 K07485; transposase
D BSQ88_07465 ISL3 family transposase K07485 K07485; transposase
D BSQ88_07005 ISL3 family transposase K07485 K07485; transposase
D BSQ88_09825 ISL3 family transposase K07485 K07485; transposase
D BSQ88_02720 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D BSQ88_02715 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D BSQ88_02885 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D BSQ88_06260 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D BSQ88_01040 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D BSQ88_00515 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D BSQ88_03450 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D BSQ88_05165 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D BSQ88_00135 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D BSQ88_05490 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D BSQ88_05805 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D BSQ88_03680 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D BSQ88_08595 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D BSQ88_08605 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D BSQ88_09235 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D BSQ88_07235 hypothetical protein K07085 K07085; putative transport protein
C 99978 Cell growth
D BSQ88_10275 KH domain-containing protein K06346 jag; spoIIIJ-associated protein
D BSQ88_05400 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI
D BSQ88_05405 pxpB; 5-oxoprolinase subunit PxpB K06351 kipI; inhibitor of KinA
D BSQ88_10245 spoVG; septation regulator SpoVG K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
D BSQ88_04975 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D BSQ88_01500 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D BSQ88_06295 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D BSQ88_07515 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D BSQ88_07675 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D BSQ88_06160 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D BSQ88_06485 creD; cell envelope integrity protein CreD K06143 creD; inner membrane protein
C 99994 Others
D BSQ88_01305 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein
D BSQ88_03510 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BSQ88_00730 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D BSQ88_00670 BAX protein K03796 bax; Bax protein
D BSQ88_04420 serine protease K07001 K07001; NTE family protein
D BSQ88_01215 phospholipase K07001 K07001; NTE family protein
D BSQ88_06835 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D BSQ88_03165 LemA family protein K03744 lemA; LemA protein
D BSQ88_09180 LemA family protein K03744 lemA; LemA protein
D BSQ88_09430 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D BSQ88_03610 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
C 99997 Function unknown
D BSQ88_02395 radical SAM protein K06871 K06871; uncharacterized protein
D BSQ88_02505 HD domain-containing protein K06885 K06885; uncharacterized protein
D BSQ88_07295 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D BSQ88_04255 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D BSQ88_04745 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D BSQ88_00855 ATP-binding protein K06921 K06921; uncharacterized protein
D BSQ88_06140 DUF134 domain-containing protein K06933 K06933; uncharacterized protein
D BSQ88_07545 KH domain-containing protein K06960 K06960; uncharacterized protein
D BSQ88_03475 N-acetyltransferase K06975 K06975; uncharacterized protein
D BSQ88_03590 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D BSQ88_05725 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D BSQ88_05750 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D BSQ88_05755 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D BSQ88_02430 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D BSQ88_02705 nitroreductase K07078 K07078; uncharacterized protein
D BSQ88_04425 hypothetical protein K07090 K07090; uncharacterized protein
D BSQ88_00035 metallophosphoesterase K07095 K07095; uncharacterized protein
D BSQ88_00340 DHH family phosphoesterase K07097 K07097; uncharacterized protein
D BSQ88_02835 transcription repressor NadR K07105 K07105; uncharacterized protein
D BSQ88_04750 ATP-binding protein K07133 K07133; uncharacterized protein
D BSQ88_06770 ATP-binding protein K07133 K07133; uncharacterized protein
D BSQ88_06775 ATP-binding protein K07133 K07133; uncharacterized protein
D BSQ88_04245 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D BSQ88_08050 pyridine nucleotide-disulfide oxidoreductase K07137 K07137; uncharacterized protein
D BSQ88_04930 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D BSQ88_10285 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D BSQ88_01505 PFL family protein K09157 K09157; uncharacterized protein
D BSQ88_02685 hypothetical protein K09787 K09787; uncharacterized protein
D BSQ88_06745 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D BSQ88_09355 DUF496 family protein K09802 K09802; uncharacterized protein
D BSQ88_02480 DUF535 domain-containing protein K09824 virK; uncharacterized protein
D BSQ88_02475 DUF535 domain-containing protein K09824 virK; uncharacterized protein
D BSQ88_07600 S1 RNA-binding domain-containing protein K00243 K00243; uncharacterized protein
D BSQ88_05475 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D BSQ88_09690 hypothetical protein K09975 K09975; uncharacterized protein
D BSQ88_07505 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein
D BSQ88_08820 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D BSQ88_07205 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024