+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Francisella persica

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D ACH24_00660 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D ACH24_06085 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C ACH24_02755 GTPase Era K03595 era; GTPase C ACH24_06390 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C ACH24_06600 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C ACH24_01025 nitrogen utilization protein B K03625 nusB; transcription antitermination protein NusB C ACH24_00205 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D ACH24_01725 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D ACH24_01185 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D ACH24_04330 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D ACH24_05955 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ACH24_01890 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D ACH24_06040 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D ACH24_00450 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] C 23S rRNA modification factors D ACH24_04615 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D ACH24_00350 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D ACH24_02540 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D ACH24_01945 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D ACH24_02530 MFS transporter K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D ACH24_06630 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D ACH24_04295 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C ACH24_02520 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C ACH24_00265 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C ACH24_05040 SAM-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] B rRNA processing factors C ACH24_00660 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C ACH24_04210 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C ACH24_06180 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] C ACH24_02040 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C ACH24_02300 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C ACH24_02755 GTPase Era K03595 era; GTPase C ACH24_01790 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C ACH24_04570 GTPase Der K03977 engA; GTPase C ACH24_06390 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C ACH24_02780 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A C ACH24_03660 GTPase HflX K03665 hflX; GTPase B Other maturation factors C ACH24_05720 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C ACH24_03990 GDP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C ACH24_06610 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C ACH24_06595 hypothetical protein K09748 rimP; ribosome maturation factor RimP C ACH24_02215 ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein C ACH24_03730 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor C ACH24_01685 RNA-binding protein K07574 yhbY; RNA-binding protein C ACH24_04270 hypothetical protein K09889 yjgA; ribosome-associated protein C ACH24_04450 ribosome hibernation promoting factor HPF K05808 hpf; ribosome hibernation promoting factor C ACH24_03510 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase C ACH24_01240 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024