+E Ribosome biogenesis KO
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Ribosome Biogenesis - Francisella persica
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D ACH24_00660 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D ACH24_06085 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C ACH24_02755 GTPase Era K03595 era; GTPase
C ACH24_06390 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C ACH24_06600 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C ACH24_01025 nitrogen utilization protein B K03625 nusB; transcription antitermination protein NusB
C ACH24_00205 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D ACH24_01725 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D ACH24_01185 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D ACH24_04330 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D ACH24_05955 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D ACH24_01890 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D ACH24_06040 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D ACH24_00450 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
C 23S rRNA modification factors
D ACH24_04615 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D ACH24_00350 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D ACH24_02540 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D ACH24_01945 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ACH24_02530 MFS transporter K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D ACH24_06630 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D ACH24_04295 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C ACH24_02520 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C ACH24_00265 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C ACH24_05040 SAM-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
B rRNA processing factors
C ACH24_00660 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C ACH24_04210 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
C ACH24_06180 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
C ACH24_02040 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
C ACH24_02300 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
B GTPases
C ACH24_02755 GTPase Era K03595 era; GTPase
C ACH24_01790 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C ACH24_04570 GTPase Der K03977 engA; GTPase
C ACH24_06390 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C ACH24_02780 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
C ACH24_03660 GTPase HflX K03665 hflX; GTPase
B Other maturation factors
C ACH24_05720 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C ACH24_03990 GDP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C ACH24_06610 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C ACH24_06595 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C ACH24_02215 ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
C ACH24_03730 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
C ACH24_01685 RNA-binding protein K07574 yhbY; RNA-binding protein
C ACH24_04270 hypothetical protein K09889 yjgA; ribosome-associated protein
C ACH24_04450 ribosome hibernation promoting factor HPF K05808 hpf; ribosome hibernation promoting factor
C ACH24_03510 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
C ACH24_01240 hypothetical protein K07040 yceD; DUF177 domain-containing protein
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024