+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Ferroglobus placidus

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D Ferp_2138 Pre-mRNA processing ribonucleoprotein, binding domain protein K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D Ferp_0882 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins D Ferp_2268 Brix domain protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 C Helicases C GTPase C RNase C Kinase C Other 90S particles D Ferp_0144 Suppressor Mra1 family protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D Ferp_0772 KH domain protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D Ferp_0773 Non-specific serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Ferp_1829 RIO-like kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D Ferp_1629 Adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] C Other pre-40S particles D Ferp_1781 ABC transporter related protein K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D Ferp_0281 small GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E Ferp_1144 Ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E Ferp_0298 Ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E Ferp_0297 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D Ferp_1721 conserved hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D Ferp_0029 translation initiation factor eIF-6 K03264 EIF6; translation initiation factor 6 D Ferp_1395 NMD3 family protein K07562 NMD3; 60S ribosomal export protein NMD3 D Ferp_0300 Ribosome maturation protein SBDS-like protein K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D Ferp_0216 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Ferp_2177 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles D Ferp_2456 Protein of unknown function UPF0113 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 B Other ribosome biogenesis factors C Ferp_1545 small GTP-binding protein K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D Ferp_2138 Pre-mRNA processing ribonucleoprotein, binding domain protein K14564 NOP56; nucleolar protein 56 D Ferp_2139 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D Ferp_0621 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D Ferp_1390 conserved hypothetical protein K07569 gar1; RNA-binding protein D Ferp_0882 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C Ferp_0758 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D Ferp_0273 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Ferp_1594 RNA methylase, NOL1/NOP2/sun family K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Ferp_1885 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Ferp_1588 RNA-binding S4 domain protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D Ferp_1553 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Ferp_1723 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Ferp_1588 RNA-binding S4 domain protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] B ribosomal protein modification factors C Ferp_0824 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] B rRNA processing factors C Ferp_0392 protein of unknown function DUF402 K22469 fau-1; ribonuclease FAU-1 [EC:3.1.26.-] B rRNA helicases B GTPases C Ferp_1545 small GTP-binding protein K03595 era; GTPase B Other maturation factors C Ferp_0857 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C Ferp_0034 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein C Ferp_0174 GTPase of unknown function domain protein K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025