+F Repair protein KO
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DNA Repair and Recombination Proteins - Fusarium poae
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D FPOAC1_009615 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D FPOAC1_000839 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E FPOAC1_000969 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E FPOAC1_000923 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E FPOAC1_010810 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E FPOAC1_003295 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E FPOAC1_001448 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E FPOAC1_005043 hypothetical protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F FPOAC1_010950 POL3; DNA-directed DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F FPOAC1_010939 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
F FPOAC1_006714 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
F FPOAC1_008997 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F FPOAC1_009035 POL2; DNA polymerase epsilon catalytic subunit K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F FPOAC1_002978 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
E FPOAC1_001140 PCN1; DNA polymerase delta processivity factor K04802 PCNA; proliferating cell nuclear antigen
E FPOAC1_009511 FEN1; Elongation of fatty acids protein 2 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E FPOAC1_008214 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E FPOAC1_009157 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E FPOAC1_010917 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E FPOAC1_003617 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E FPOAC1_008889 hypothetical protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F FPOAC1_004467 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F FPOAC1_008418 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F FPOAC1_010506 hypothetical protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F FPOAC1_002619 RBX1; RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F FPOAC1_008142 hypothetical protein K10609 CUL4; cullin 4
F FPOAC1_008434 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F FPOAC1_008872 hypothetical protein K15082 RAD7; DNA repair protein RAD7
F FPOAC1_008871 hypothetical protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F FPOAC1_000974 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F FPOAC1_002787 RPB2; DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F FPOAC1_001557 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F FPOAC1_001211 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F FPOAC1_011889 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F FPOAC1_010409 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F FPOAC1_001310 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F FPOAC1_006732 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F FPOAC1_010230 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F FPOAC1_010231 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F FPOAC1_000949 RPB10; DNA-directed RNA polymerase II subunit L K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F FPOAC1_010559 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F FPOAC1_006472 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F FPOAC1_002619 RBX1; RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F FPOAC1_008142 hypothetical protein K10609 CUL4; cullin 4
F FPOAC1_008434 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
F FPOAC1_003140 hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F FPOAC1_002664 hypothetical protein K10841 ERCC6; DNA excision repair protein ERCC-6
F FPOAC1_011271 hypothetical protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E FPOAC1_011057 PTR8; transcription factor TFIIH complex ERCC-3 subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E FPOAC1_006754 RAD15; DNA-dependent ATPase of the nucleotide excision repair factor 4 complex K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E FPOAC1_006769 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E FPOAC1_008967 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E FPOAC1_009592 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E FPOAC1_004365 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E FPOAC1_003056 TFB5; TFIIH complex subunit tfb5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E FPOAC1_011217 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E FPOAC1_002267 hypothetical protein K06634 CCNH; cyclin H
E FPOAC1_012542 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E FPOAC1_003207 hypothetical protein K07466 RFA1; replication factor A1
E FPOAC1_011920 hypothetical protein K10739 RFA2; replication factor A2
D Other NER factors
E FPOAC1_001788 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells
E FPOAC1_012437 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1
E FPOAC1_004781 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E FPOAC1_000960 hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5
E FPOAC1_008214 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E FPOAC1_008025 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E FPOAC1_000377 hypothetical protein K03869 CUL3; cullin 3
E FPOAC1_000314 hypothetical protein K03872 ELOC; elongin-C
E FPOAC1_001204 hypothetical protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E FPOAC1_009325 MSH2; MutS-like protein K08735 MSH2; DNA mismatch repair protein MSH2
E FPOAC1_010878 MSH3; Mismatch repair protein msh3 K08736 MSH3; DNA mismatch repair protein MSH3
E FPOAC1_011344 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E FPOAC1_011916 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1
E FPOAC1_002041 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
E FPOAC1_001735 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E FPOAC1_010950 POL3; DNA-directed DNA polymerase delta K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E FPOAC1_010939 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E FPOAC1_006714 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E FPOAC1_008997 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E FPOAC1_003207 hypothetical protein K07466 RFA1; replication factor A1
E FPOAC1_011920 hypothetical protein K10739 RFA2; replication factor A2
D RFC (replication factor C)
E FPOAC1_000338 hypothetical protein K10754 RFC1; replication factor C subunit 1
E FPOAC1_010975 RFC4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
E FPOAC1_001298 RFC2; Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4
E FPOAC1_000340 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
E FPOAC1_008992 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E FPOAC1_001140 PCN1; DNA polymerase delta processivity factor K04802 PCNA; proliferating cell nuclear antigen
E FPOAC1_010803 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E FPOAC1_008214 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E FPOAC1_011665 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E FPOAC1_001817 MUS23; Double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E FPOAC1_000745 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E FPOAC1_001817 MUS23; Double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E FPOAC1_000745 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E FPOAC1_001242 RHP51; RecA recombinase Rhp51 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E FPOAC1_001242 RHP51; RecA recombinase Rhp51 K04482 RAD51; DNA repair protein RAD51
E FPOAC1_000890 hypothetical protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E FPOAC1_003244 hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E FPOAC1_011762 RHP54; DNA repair protein rhp54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
D Bloom's syndrome complex (BTR)
E FPOAC1_010444 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E FPOAC1_009314 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E FPOAC1_003207 hypothetical protein K07466 RFA1; replication factor A1
E FPOAC1_011920 hypothetical protein K10739 RFA2; replication factor A2
D Protein phosphatase 4
E FPOAC1_009196 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E FPOAC1_004829 hypothetical protein K22803 SMC5; structural maintenance of chromosomes protein 5
E FPOAC1_011799 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6
E FPOAC1_012097 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E FPOAC1_004559 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E FPOAC1_004635 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E FPOAC1_001809 hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E FPOAC1_001218 MUS81; Crossover junction endonuclease mus81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E FPOAC1_006419 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E FPOAC1_008816 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E FPOAC1_006855 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E FPOAC1_009006 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E FPOAC1_011784 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E FPOAC1_000772 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E FPOAC1_000567 MPH1; 3'-5' DNA helicase K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E FPOAC1_010453 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E FPOAC1_001817 MUS23; Double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E FPOAC1_000745 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E FPOAC1_010770 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E FPOAC1_006602 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E FPOAC1_000648 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
E FPOAC1_002011 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E FPOAC1_010917 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E FPOAC1_008350 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E FPOAC1_007159 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E FPOAC1_007420 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E FPOAC1_010936 hypothetical protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E FPOAC1_010444 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E FPOAC1_009314 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E FPOAC1_010806 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E FPOAC1_001242 RHP51; RecA recombinase Rhp51 K04482 RAD51; DNA repair protein RAD51
E FPOAC1_000382 hypothetical protein K11137 TELO2; telomere length regulation protein
E FPOAC1_006818 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E FPOAC1_004200 hypothetical protein K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
D Ubiquitin ligases
D Others
E FPOAC1_008430 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E FPOAC1_011088 hypothetical protein K24752 WDR70; WD repeat-containing protein 70
E FPOAC1_011665 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D FPOAC1_005071 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D FPOAC1_009272 hypothetical protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D FPOAC1_001511 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D FPOAC1_001118 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D FPOAC1_005051 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D FPOAC1_008610 UBC2; Ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D FPOAC1_006715 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D FPOAC1_002859 RAD5; DNA helicase rad5 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D FPOAC1_011809 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D FPOAC1_012397 SPM2; Ubiquitin-conjugating enzyme spm2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D FPOAC1_004677 UBC13; Ubiquitin-conjugating enzyme 13 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D FPOAC1_001140 PCN1; DNA polymerase delta processivity factor K04802 PCNA; proliferating cell nuclear antigen
D FPOAC1_011745 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D FPOAC1_006588 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D FPOAC1_008475 hypothetical protein K10903 HUS1; HUS1 checkpoint protein
D FPOAC1_000290 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D FPOAC1_001035 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D FPOAC1_010975 RFC4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D FPOAC1_001298 RFC2; Subunit of heteropentameric Replication factor C (RF-C) K10755 RFC2_4; replication factor C subunit 2/4
D FPOAC1_000340 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
D FPOAC1_008992 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D FPOAC1_000290 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D FPOAC1_010555 TOF1; Topoisomerase 1-associated factor 1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D FPOAC1_005128 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D FPOAC1_003015 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D FPOAC1_000382 hypothetical protein K11137 TELO2; telomere length regulation protein
D FPOAC1_007996 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D FPOAC1_009228 hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D FPOAC1_011101 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D FPOAC1_004810 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D FPOAC1_008141 TEL1; Serine/threonine-protein kinase tel1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D FPOAC1_001616 hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D FPOAC1_010889 hypothetical protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D FPOAC1_000586 hypothetical protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D FPOAC1_010587 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D FPOAC1_001333 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D FPOAC1_003325 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D FPOAC1_008287 hypothetical protein K24664 FKH; forkhead protein FKH
D FPOAC1_009710 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D FPOAC1_009253 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D FPOAC1_000584 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D FPOAC1_000379 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D FPOAC1_011964 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
D FPOAC1_004605 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D FPOAC1_003317 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D FPOAC1_002837 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D FPOAC1_011831 CEF1; Pre-mRNA-splicing factor cef1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D FPOAC1_002985 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D FPOAC1_001436 PLRG1; Pleiotropic regulator 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D FPOAC1_012526 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FPOAC1_013685 uncharacterized protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FPOAC1_008521 RNR1; ribonucleotide-diphosphate reductase subunit rnr1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D FPOAC1_008263 RNR2; Ribonucleotide-diphosphate reductase (RNR), small subunit K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D FPOAC1_009615 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D FPOAC1_000839 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E FPOAC1_000969 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E FPOAC1_003173 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E FPOAC1_004555 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E FPOAC1_003295 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E FPOAC1_004505 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E FPOAC1_004505 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D FPOAC1_012526 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D FPOAC1_013685 uncharacterized protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024