+D GENES KO #

  KEGG Orthology (KO) - Candidatus Fukatsuia symbiotica

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:fsm00010] D CCS41_13185 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CCS41_07935 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCS41_11995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CCS41_00805 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCS41_09655 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCS41_04070 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCS41_09600 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCS41_07490 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCS41_01225 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CCS41_04940 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CCS41_05905 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CCS41_06195 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:fsm00020] D CCS41_05205 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCS41_05190 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CCS41_05195 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CCS41_05215 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CCS41_05210 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CCS41_05225 succinate dehydrogenase cytochrome b556 large subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CCS41_05220 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CCS41_07660 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CCS41_00625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCS41_01225 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00030 Pentose phosphate pathway [PATH:fsm00030] D CCS41_13185 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCS41_11105 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CCS41_09675 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D CCS41_11015 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CCS41_07950 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CCS41_04600 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CCS41_09930 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CCS41_07745 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CCS41_07935 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:fsm00040] D CCS41_00765 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCS41_11015 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:fsm00051] D CCS41_07655 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CCS41_00990 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CCS41_07935 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCS41_11995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CCS41_07445 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CCS41_07440 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CCS41_07435 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:fsm00052] D CCS41_00940 dTDP-glucose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:fsm00053] D CCS41_00765 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCS41_13375 cmtB; PTS mannitol transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CCS41_13380 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CCS41_13385 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component C 00500 Starch and sucrose metabolism [PATH:fsm00500] D CCS41_04940 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CCS41_13185 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:fsm00520] D CCS41_02650 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CCS41_04940 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CCS41_05375 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CCS41_05385 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CCS41_05380 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CCS41_01160 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CCS41_12145 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CCS41_10750 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CCS41_07075 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D CCS41_07085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CCS41_07080 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CCS41_07070 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CCS41_13945 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D CCS41_05905 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CCS41_06195 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CCS41_00765 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCS41_00940 dTDP-glucose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CCS41_07445 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CCS41_07440 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CCS41_07435 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CCS41_13185 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCS41_07655 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CCS41_00990 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CCS41_13935 NAD-dependent epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] C 00620 Pyruvate metabolism [PATH:fsm00620] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCS41_13365 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CCS41_13370 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCS41_07490 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCS41_04900 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CCS41_04895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CCS41_04035 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CCS41_14920 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CCS41_00190 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CCS41_06715 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CCS41_00480 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CCS41_00625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCS41_07660 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CCS41_01225 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CCS41_04480 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:fsm00630] D CCS41_00625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCS41_08205 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCS41_04890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:fsm00640] D CCS41_13365 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CCS41_13370 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCS41_04900 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CCS41_04895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CCS41_04035 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CCS41_05195 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CCS41_05190 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:fsm00650] D CCS41_05215 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CCS41_05210 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CCS41_05225 succinate dehydrogenase cytochrome b556 large subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CCS41_05220 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CCS41_10780 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCS41_10775 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:fsm00660] D CCS41_10780 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCS41_10775 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CCS41_05195 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CCS41_05190 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CCS41_04490 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CCS41_04495 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CCS41_04485 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D CCS41_11995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:fsm00190] D CCS41_00105 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D CCS41_00110 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D CCS41_00120 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CCS41_00125 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CCS41_00135 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D CCS41_00140 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D CCS41_00145 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CCS41_00150 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D CCS41_00155 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D CCS41_00165 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CCS41_07875 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CCS41_05215 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CCS41_05210 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CCS41_05225 succinate dehydrogenase cytochrome b556 large subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CCS41_05220 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CCS41_01370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CCS41_01365 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D CCS41_01360 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D CCS41_01350 cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D CCS41_09760 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CCS41_09770 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CCS41_13515 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CCS41_13510 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CCS41_13520 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CCS41_13500 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CCS41_13535 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CCS41_13525 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CCS41_13530 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:fsm00710] D CCS41_00805 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCS41_07935 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCS41_07950 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CCS41_09930 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CCS41_09615 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D CCS41_11995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CCS41_11015 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CCS41_04600 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CCS41_01225 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CCS41_00625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:fsm00720] D CCS41_00625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCS41_07660 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CCS41_05215 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CCS41_05210 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CCS41_05225 succinate dehydrogenase cytochrome b556 large subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CCS41_05220 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CCS41_05190 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CCS41_05195 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CCS41_04900 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CCS41_04895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CCS41_04035 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CCS41_13370 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCS41_13365 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:fsm00680] D CCS41_04890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCS41_09600 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCS41_00625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCS41_07935 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CCS41_13365 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CCS41_13370 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCS41_09655 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCS41_04070 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:fsm00910] D CCS41_08205 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCS41_05155 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:fsm00920] D CCS41_03650 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CCS41_03660 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CCS41_03655 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CCS41_08180 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CCS41_10680 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D CCS41_04350 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CCS41_12040 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:fsm00061] D CCS41_04900 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CCS41_04895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CCS41_04035 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CCS41_11535 acyl carrier protein K02078 acpP; acyl carrier protein D CCS41_09025 acyl carrier protein K02078 acpP; acyl carrier protein D CCS41_11525 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CCS41_11520 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CCS41_05230 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CCS41_11540 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CCS41_13890 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_11530 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_08375 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CCS41_12105 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CCS41_07600 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CCS41_11130 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D CCS41_11130 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:fsm00561] D CCS41_01200 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CCS41_08525 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CCS41_10445 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:fsm00564] D CCS41_11675 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CCS41_08525 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CCS41_10445 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CCS41_01290 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CCS41_00595 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] D CCS41_05365 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D CCS41_12080 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CCS41_12785 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CCS41_01450 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CCS41_07020 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CCS41_13090 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D CCS41_00735 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:fsm00230] D CCS41_09690 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CCS41_07745 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CCS41_04055 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CCS41_10260 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CCS41_01090 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CCS41_01085 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CCS41_05325 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CCS41_07820 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CCS41_10255 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CCS41_13030 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CCS41_04620 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CCS41_04015 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CCS41_10425 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CCS41_04010 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CCS41_13170 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CCS41_08325 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCS41_13355 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D CCS41_13160 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CCS41_07295 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CCS41_03950 GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D CCS41_09120 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D CCS41_05255 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CCS41_00855 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CCS41_09685 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] C 00240 Pyrimidine metabolism [PATH:fsm00240] D CCS41_08465 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CCS41_08460 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CCS41_11365 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CCS41_11495 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CCS41_08580 dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CCS41_01230 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CCS41_07575 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CCS41_12060 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CCS41_10425 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CCS41_09050 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CCS41_04330 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CCS41_08325 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCS41_13355 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D CCS41_07910 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CCS41_03555 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CCS41_04955 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:fsm00250] D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CCS41_05395 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CCS41_13350 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CCS41_05255 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CCS41_07820 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CCS41_11365 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CCS41_08205 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCS41_08465 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CCS41_08460 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CCS41_04055 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:fsm00260] D CCS41_04080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CCS41_13320 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCS41_04085 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CCS41_04090 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CCS41_04890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCS41_09655 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCS41_04070 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCS41_12785 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CCS41_10760 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] C 00270 Cysteine and methionine metabolism [PATH:fsm00270] D CCS41_04350 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CCS41_12040 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CCS41_05670 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CCS41_05175 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CCS41_05165 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CCS41_14095 acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D CCS41_04620 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CCS41_04080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CCS41_13320 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCS41_10770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCS41_12910 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CCS41_05695 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CCS41_00625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:fsm00280] D CCS41_10770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:fsm00290] D CCS41_10760 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CCS41_04490 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CCS41_04495 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CCS41_04485 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CCS41_10780 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCS41_10775 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CCS41_11730 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CCS41_10770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCS41_13350 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CCS41_04480 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:fsm00300] D CCS41_04080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CCS41_13320 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCS41_05335 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCS41_08455 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CCS41_06735 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CCS41_01325 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CCS41_09485 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] C 00310 Lysine degradation D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:fsm00220] D CCS41_08205 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCS41_08465 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CCS41_08460 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CCS41_13350 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] C 00330 Arginine and proline metabolism [PATH:fsm00330] D CCS41_07640 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D CCS41_05165 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CCS41_05175 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CCS41_00620 spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D CCS41_11215 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:fsm00400] D CCS41_11445 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CCS41_11030 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CCS41_04905 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CCS41_09035 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CCS41_11035 shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71] D CCS41_00300 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CCS41_11630 hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:fsm00430] D CCS41_13370 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCS41_13365 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:fsm00440] D CCS41_00895 aepX; phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D CCS41_00900 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] D CCS41_00905 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D CCS41_00595 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] C 00450 Selenocompound metabolism D CCS41_07515 bifunctional cysteine desulfurase/selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] C 00460 Cyanoamino acid metabolism D CCS41_04890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:fsm00470] D CCS41_00810 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CCS41_09450 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCS41_09470 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CCS41_01325 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:fsm00480] D CCS41_12910 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CCS41_05695 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CCS41_06695 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CCS41_03310 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D CCS41_09950 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CCS41_08590 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D CCS41_11105 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CCS41_05165 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:fsm00540] D CCS41_12110 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CCS41_12100 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CCS41_01080 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CCS41_12115 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CCS41_09105 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CCS41_07710 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CCS41_11410 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CCS41_10490 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CCS41_01385 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CCS41_11470 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CCS41_11100 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D CCS41_08475 lipid A phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CCS41_07420 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CCS41_07065 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CCS41_07100 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CCS41_00960 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CCS41_05465 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CCS41_01410 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CCS41_08495 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CCS41_08485 lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D CCS41_08490 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CCS41_09925 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] C 00542 O-Antigen repeat unit biosynthesis [PATH:fsm00542] D CCS41_11800 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:fsm00541] D CCS41_00940 dTDP-glucose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CCS41_00765 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCS41_11825 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCS41_11820 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CCS41_11835 dTDP-4-amino-4,6-dideoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D CCS41_11830 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D CCS41_13935 NAD-dependent epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D CCS41_07655 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CCS41_00990 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00550 Peptidoglycan biosynthesis [PATH:fsm00550] D CCS41_12145 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CCS41_10750 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CCS41_09455 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CCS41_09470 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CCS41_09485 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CCS41_09450 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCS41_12075 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CCS41_01440 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCS41_09475 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CCS41_09460 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CCS41_00275 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CCS41_08135 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CCS41_09490 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CCS41_08125 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CCS41_09585 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCS41_03845 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:fsm00552] D CCS41_01440 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCS41_11800 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CCS41_00920 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] D CCS41_00925 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:fsm00543] D CCS41_11800 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CCS41_11845 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D CCS41_04350 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:fsm00730] D CCS41_10285 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CCS41_03315 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCS41_10310 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D CCS41_05350 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CCS41_10305 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CCS41_10290 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CCS41_13095 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CCS41_01455 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CCS41_00855 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:fsm00740] D CCS41_07560 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CCS41_13110 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CCS41_09710 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D CCS41_13105 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CCS41_07475 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CCS41_08430 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CCS41_04530 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D CCS41_09690 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CCS41_04060 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:fsm00750] D CCS41_07945 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D CCS41_04020 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D CCS41_03760 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CCS41_10630 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D CCS41_04090 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:fsm00760] D CCS41_04525 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CCS41_11345 nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CCS41_12795 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CCS41_12185 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CCS41_11305 NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:fsm00770] D CCS41_10780 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCS41_10775 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CCS41_11730 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CCS41_11620 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CCS41_03560 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CCS41_12975 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CCS41_01105 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CCS41_10635 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CCS41_10770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:fsm00780] D CCS41_09405 bioC; malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D CCS41_05230 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CCS41_11540 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CCS41_13890 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_11530 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_12105 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CCS41_07600 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CCS41_04860 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D CCS41_09400 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CCS41_09390 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CCS41_09410 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CCS41_10755 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:fsm00785] D CCS41_08115 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CCS41_08110 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCS41_05205 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] C 00790 Folate biosynthesis [PATH:fsm00790] D CCS41_03915 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CCS41_07345 folB; bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CCS41_06935 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CCS41_01165 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CCS41_08470 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CCS41_04040 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CCS41_07560 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CCS41_12240 aminodeoxychorismate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D CCS41_07455 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D CCS41_06930 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CCS41_06925 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CCS41_08560 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CCS41_06730 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:fsm00670] D CCS41_08470 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CCS41_04890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCS41_10255 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CCS41_04955 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:fsm00860] D CCS41_05750 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCS41_07730 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CCS41_00470 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CCS41_09125 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CCS41_09130 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CCS41_10275 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CCS41_05665 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D CCS41_13215 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D CCS41_00860 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CCS41_01370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:fsm00130] D CCS41_04910 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D CCS41_04915 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CCS41_04535 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D CCS41_04060 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CCS41_02430 FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D CCS41_04885 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D CCS41_02435 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D CCS41_09100 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CCS41_13240 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:fsm00900] D CCS41_05350 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CCS41_12070 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CCS41_12995 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CCS41_07740 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CCS41_12990 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CCS41_10405 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CCS41_08450 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CCS41_04060 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CCS41_05355 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CCS41_09535 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CCS41_12075 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CCS41_07950 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:fsm00523] D CCS41_11825 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCS41_11820 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D CCS41_08025 phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] C 01055 Biosynthesis of vancomycin group antibiotics D CCS41_11820 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:fsm00261] D CCS41_13895 MbtH family protein K05375 mbtH; MbtH protein D CCS41_04080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CCS41_13320 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCS41_05335 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCS41_08455 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:fsm00521] D CCS41_11825 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCS41_11820 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:fsm00525] D CCS41_11825 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCS41_11820 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CCS41_11525 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CCS41_13890 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_11530 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_07600 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:fsm00998] D CCS41_11535 acyl carrier protein K02078 acpP; acyl carrier protein D CCS41_09025 acyl carrier protein K02078 acpP; acyl carrier protein D CCS41_00895 aepX; phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D CCS41_00900 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites [PATH:fsm00999] D CCS41_05670 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CCS41_09035 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites [PATH:fsm00997] D CCS41_08780 paerucumarin biosynthesis protein PvcA K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24] D CCS41_08785 Pyoverdine biosynthesis protein K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10] D CCS41_02975 lysine 6-monooxygenase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] D CCS41_02990 aerobactin synthase IucA K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38] D CCS41_02980 IucA/IucC family siderophore biosynthesis protein K03895 iucC; aerobactin synthase [EC:6.3.2.39] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CCS41_04060 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:fsm03020] D CCS41_10320 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CCS41_10980 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CCS41_13165 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:fsm03010] D CCS41_09055 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CCS41_12050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CCS41_10880 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CCS41_10975 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CCS41_10935 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CCS41_01260 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CCS41_10825 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CCS41_10920 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CCS41_12940 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CCS41_10840 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CCS41_10970 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CCS41_10820 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CCS41_10965 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CCS41_10915 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CCS41_04540 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CCS41_10455 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CCS41_10895 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CCS41_01250 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CCS41_10870 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CCS41_08480 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CCS41_07320 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CCS41_10340 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CCS41_10865 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CCS41_10845 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CCS41_10850 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CCS41_10910 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CCS41_10925 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CCS41_10330 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CCS41_01245 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CCS41_10335 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CCS41_10345 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CCS41_12935 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CCS41_10900 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CCS41_10885 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CCS41_10985 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CCS41_10930 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CCS41_10470 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CCS41_08255 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CCS41_09530 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CCS41_10875 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CCS41_10860 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CCS41_10905 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CCS41_13050 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CCS41_09525 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CCS41_10890 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CCS41_10940 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CCS41_11600 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CCS41_11515 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CCS41_03575 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CCS41_11565 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CCS41_08260 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CCS41_10960 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CCS41_10250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCS41_04655 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCS41_01430 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCS41_00260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCS41_00265 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:fsm00970] D CCS41_01425 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCS41_05755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCS41_04645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCS41_06590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_02445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_11860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_04135 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_11280 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CCS41_10230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCS41_13190 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCS41_02405 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CCS41_05405 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCS41_05400 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCS41_00255 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCS41_10245 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCS41_13205 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCS41_11170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCS41_02410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCS41_10360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCS41_11865 tRNA-His K14226 tRNA-His; tRNA His D CCS41_01420 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CCS41_04650 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CCS41_02400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_05410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_06680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_11870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_01150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_09805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCS41_05735 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCS41_02865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCS41_05415 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_00680 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_01145 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_01170 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_01175 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_06905 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CCS41_09920 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCS41_11875 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCS41_13035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCS41_06595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCS41_07705 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCS41_10370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCS41_04630 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCS41_10225 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CCS41_10365 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CCS41_07485 tRNA-Val K14237 tRNA-Val; tRNA Val D CCS41_05740 tRNA-Val K14237 tRNA-Val; tRNA Val D CCS41_05745 tRNA-Val K14237 tRNA-Val; tRNA Val D CCS41_05750 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCS41_12135 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CCS41_09955 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CCS41_11425 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CCS41_08270 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CCS41_07780 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CCS41_01240 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CCS41_07095 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CCS41_12810 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCS41_08435 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CCS41_03820 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CCS41_11460 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCS41_01390 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CCS41_10400 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CCS41_08250 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CCS41_08245 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CCS41_11010 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:fsm03060] D CCS41_10955 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCS41_10355 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCS41_01155 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCS41_02715 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CCS41_02725 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CCS41_11550 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCS41_09420 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCS41_04360 hypothetical protein K03071 secB; preprotein translocase subunit SecB D CCS41_10450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CCS41_08335 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CCS41_11710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCS41_09085 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D CCS41_09080 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CCS41_09075 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CCS41_03960 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D CCS41_08440 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:fsm04122] D CCS41_03315 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCS41_01210 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CCS41_10815 sulfurtransferase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CCS41_10810 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CCS41_10805 sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CCS41_13245 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CCS41_07810 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CCS41_10300 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:fsm03018] D CCS41_13335 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CCS41_11780 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CCS41_09600 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCS41_04545 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CCS41_03880 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CCS41_11735 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CCS41_04555 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CCS41_01300 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CCS41_11790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CCS41_03720 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCS41_13310 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCS41_13270 RNA chaperone Hfq K03666 hfq; host factor-I protein D CCS41_06940 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:fsm03030] D CCS41_00170 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCS41_13140 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCS41_00835 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCS41_07905 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCS41_12800 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCS41_05240 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CCS41_07090 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CCS41_11575 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCS41_07315 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CCS41_00375 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CCS41_02775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCS41_00180 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CCS41_13145 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CCS41_04920 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:fsm03410] D CCS41_07675 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CCS41_09635 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CCS41_12980 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CCS41_13390 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CCS41_00780 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CCS41_04920 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:fsm03420] D CCS41_07855 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CCS41_03740 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CCS41_01310 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCS41_04920 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:fsm03430] D CCS41_04125 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CCS41_13280 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CCS41_13330 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D CCS41_01310 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCS41_04470 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CCS41_10380 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CCS41_05360 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CCS41_00375 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CCS41_02775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCS41_13140 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCS41_11575 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCS41_00835 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCS41_12800 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCS41_07905 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCS41_00170 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCS41_07090 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CCS41_05240 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CCS41_04920 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CCS41_11020 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:fsm03440] D CCS41_00375 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CCS41_02775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCS41_11580 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CCS41_03975 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CCS41_00845 recombination protein RecR K06187 recR; recombination protein RecR D CCS41_12180 recA; recombinase RecA K03553 recA; recombination protein RecA D CCS41_09725 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CCS41_09730 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CCS41_13155 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCS41_06770 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CCS41_10590 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CCS41_06775 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CCS41_13140 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCS41_11575 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCS41_00835 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCS41_12800 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCS41_07905 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCS41_00170 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCS41_07090 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CCS41_05240 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CCS41_11605 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CCS41_01255 priB; primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:fsm02010] D CCS41_03650 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CCS41_03660 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CCS41_03655 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CCS41_09670 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CCS41_04510 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D CCS41_04515 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D CCS41_04520 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CCS41_03680 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D CCS41_03665 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D CCS41_03670 putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein D CCS41_03675 potG; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D CCS41_12160 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CCS41_12165 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CCS41_12170 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CCS41_12155 anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D CCS41_12175 phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CCS41_13340 D-ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D CCS41_13435 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CCS41_13430 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CCS41_13425 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CCS41_13420 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CCS41_11745 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein D CCS41_11750 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D CCS41_11755 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CCS41_03645 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D CCS41_03640 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D CCS41_03630 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D CCS41_03935 artP; amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CCS41_01395 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CCS41_01400 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D CCS41_01405 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CCS41_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCS41_00755 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D CCS41_00745 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CCS41_00740 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CCS41_07630 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CCS41_07625 antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CCS41_07620 antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CCS41_07610 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D CCS41_03010 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CCS41_03015 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CCS41_03005 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CCS41_01330 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D CCS41_03985 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D CCS41_03980 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D CCS41_11090 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CCS41_11080 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D CCS41_11085 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CCS41_00515 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D CCS41_00525 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D CCS41_00530 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D CCS41_00520 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein D CCS41_07840 lipoprotein-releasing system transmembrane subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D CCS41_07850 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CCS41_07845 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CCS41_06690 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CCS41_06685 lipopolysaccharide ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CCS41_11395 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CCS41_11720 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CCS41_11715 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CCS41_09110 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CCS41_13120 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CCS41_13125 multidrug ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CCS41_09565 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CCS41_09570 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:fsm02060] D CCS41_04935 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CCS41_04930 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D CCS41_04940 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CCS41_05905 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CCS41_06195 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CCS41_05375 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CCS41_07445 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CCS41_07440 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CCS41_07435 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CCS41_13375 cmtB; PTS mannitol transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CCS41_13380 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CCS41_13385 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CCS41_11370 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D CCS41_11380 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:fsm03070] D CCS41_09695 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CCS41_05050 EscF/YscF/HrpA family type III secretion system needle major subunit K03221 yscF; type III secretion protein F D CCS41_09005 EscF/YscF/HrpA family type III secretion system needle major subunit K03221 yscF; type III secretion protein F D CCS41_09355 hypothetical protein K04057 yscP; type III secretion protein P D CCS41_05065 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D CCS41_05115 EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D CCS41_05120 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D CCS41_05125 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D CCS41_05130 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D CCS41_05090 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D CCS41_07235 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D CCS41_05095 EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CCS41_07210 hypothetical protein K03225 yscQ; type III secretion protein Q D CCS41_12845 hypothetical protein K02453 gspD; general secretion pathway protein D D CCS41_00510 hypothetical protein K02465 gspS; general secretion pathway protein S D CCS41_12840 hypothetical protein K02452 gspC; general secretion pathway protein C D CCS41_12855 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D CCS41_12860 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D CCS41_12865 hypothetical protein K02457 gspH; general secretion pathway protein H D CCS41_12870 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D CCS41_12875 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D CCS41_12880 hypothetical protein K02460 gspK; general secretion pathway protein K D CCS41_12885 hypothetical protein K02461 gspL; general secretion pathway protein L D CCS41_12850 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CCS41_13815 hypothetical protein K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CCS41_12895 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CCS41_02715 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CCS41_10355 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCS41_01155 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCS41_10955 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCS41_02725 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CCS41_11550 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCS41_09420 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCS41_11710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCS41_04360 hypothetical protein K03071 secB; preprotein translocase subunit SecB D CCS41_10450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CCS41_09085 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D CCS41_09080 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CCS41_09075 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CCS41_14600 murein transglycosylase K03194 virB1; type IV secretion system protein VirB1 D CCS41_14580 conjugal transfer protein K03200 virB5; type IV secretion system protein VirB5 D CCS41_14525 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9 D CCS41_14535 conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6 D CCS41_14530 conjugal transfer protein K03203 virB8; type IV secretion system protein VirB8 D CCS41_14510 hypothetical protein K03195 virB10; type IV secretion system protein VirB10 D CCS41_14585 conjugal transfer protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D CCS41_14495 conjugal transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:fsm02020] D CCS41_13040 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CCS41_13045 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CCS41_13435 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CCS41_07825 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CCS41_12285 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CCS41_12280 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CCS41_09960 porin K09476 ompF; outer membrane pore protein F D CCS41_11970 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CCS41_11975 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CCS41_10740 hypothetical protein K25864 mzrA; modulator protein MzrA D CCS41_01340 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D CCS41_05660 hydrophobe/amphiphile efflux-1 family RND transporter K18324 acrD; multidrug efflux pump D CCS41_07085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CCS41_09325 hypothetical protein K02406 fliC; flagellin D CCS41_09365 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CCS41_09370 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CCS41_10685 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CCS41_04075 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D CCS41_11570 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D CCS41_00480 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CCS41_04465 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CCS41_07010 two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CCS41_12140 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CCS41_08305 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D CCS41_08205 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCS41_11390 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CCS41_08295 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CCS41_04965 DNA-binding response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB D CCS41_09180 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D CCS41_03935 artP; amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CCS41_09620 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CCS41_09760 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CCS41_09770 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CCS41_07385 type I secretion system permease/ATPase K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB D CCS41_07390 HlyD family type I secretion periplasmic adaptor subunit K12532 rtxD; membrane fusion protein, RTX toxin transport system D CCS41_09695 outer membrane channel protein TolC K12340 tolC; outer membrane protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:fsm02024] D CCS41_13270 RNA chaperone Hfq K03666 hfq; host factor-I protein D CCS41_11445 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CCS41_08295 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CCS41_12190 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D CCS41_12195 conjugal transfer protein K20528 trbC; type IV secretion system protein TrbC D CCS41_12200 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD D CCS41_12205 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D CCS41_12230 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D CCS41_12235 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D CCS41_12210 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D CCS41_12215 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D CCS41_12220 hypothetical protein K20267 trbH; type IV secretion system protein TrbH D CCS41_14095 acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D CCS41_14090 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CCS41_11130 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCS41_09620 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CCS41_07560 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CCS41_13110 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CCS41_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCS41_00755 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D CCS41_00745 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CCS41_00740 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CCS41_11550 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCS41_10355 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCS41_01155 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCS41_10955 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCS41_02725 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CCS41_09420 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCS41_11710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCS41_04360 hypothetical protein K03071 secB; preprotein translocase subunit SecB D CCS41_10450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:fsm02030] D CCS41_13340 D-ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D CCS41_09195 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CCS41_09175 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D CCS41_09170 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CCS41_09370 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CCS41_09375 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:fsm02040] D CCS41_09185 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D CCS41_09190 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CCS41_09195 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CCS41_09200 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CCS41_09360 flagellar biogenesis protein K02415 fliL; flagellar protein FliL D CCS41_09175 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D CCS41_09170 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CCS41_09165 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CCS41_09160 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CCS41_09155 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CCS41_09145 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CCS41_09240 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CCS41_09245 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CCS41_09250 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CCS41_09255 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D CCS41_09260 hypothetical protein K02390 flgE; flagellar hook protein FlgE D CCS41_09265 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CCS41_09270 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CCS41_09275 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D CCS41_09280 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D CCS41_09285 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CCS41_09290 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CCS41_09305 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D CCS41_09325 hypothetical protein K02406 fliC; flagellin D CCS41_09335 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D CCS41_09340 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CCS41_09370 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CCS41_09375 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB D CCS41_09235 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D CCS41_07310 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CCS41_11390 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CCS41_09180 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D CCS41_09365 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CCS41_09600 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:fsm01501] D CCS41_09960 porin K09476 ompF; outer membrane pore protein F D CCS41_02650 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CCS41_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCS41_00755 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D CCS41_00745 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CCS41_00740 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CCS41_13015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CCS41_09695 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CCS41_08135 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CCS41_09490 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:fsm01502] D CCS41_09450 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCS41_00810 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CCS41_09475 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CCS41_09460 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:fsm01503] D CCS41_07825 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CCS41_08475 lipid A phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CCS41_07420 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CCS41_07085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CCS41_07080 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CCS41_07075 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D CCS41_07070 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CCS41_07065 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CCS41_07060 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D CCS41_07055 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D CCS41_07630 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CCS41_07625 antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CCS41_07620 antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CCS41_07610 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D CCS41_08795 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D CCS41_11970 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CCS41_11975 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CCS41_11625 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_13285 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_01340 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D CCS41_12255 protein disulfide oxidoreductase DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CCS41_13015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CCS41_09695 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CCS41_12110 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:fsm01000] C 01001 Protein kinases [BR:fsm01001] D CCS41_07410 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CCS41_13040 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CCS41_12285 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CCS41_11970 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CCS41_10685 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CCS41_04465 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:fsm01009] D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CCS41_00850 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:fsm01002] D CCS41_08440 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D CCS41_13815 hypothetical protein K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CCS41_12895 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CCS41_04010 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CCS41_13075 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CCS41_04055 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CCS41_05395 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CCS41_06700 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D CCS41_09660 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D CCS41_09950 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CCS41_02340 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D CCS41_08795 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D CCS41_06695 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CCS41_03310 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D CCS41_11095 murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CCS41_06755 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CCS41_02440 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CCS41_07990 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CCS41_00550 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D CCS41_12085 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CCS41_07470 serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D CCS41_01340 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D CCS41_13445 outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D CCS41_08125 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CCS41_09585 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCS41_03845 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCS41_08535 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CCS41_08545 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CCS41_08370 Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D CCS41_08585 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CCS41_03960 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D CCS41_07985 tail-specific peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CCS41_00795 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D CCS41_11670 rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D CCS41_09515 HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D CCS41_05455 metalloprotease PmbA K03592 pmbA; PmbA protein D CCS41_05730 metalloprotease TldD K03568 tldD; TldD protein D CCS41_13255 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC C 01003 Glycosyltransferases [BR:fsm01003] D CCS41_00275 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CCS41_11845 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D CCS41_11800 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:fsm01005] D CCS41_12110 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CCS41_12115 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CCS41_12100 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CCS41_01080 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CCS41_09105 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CCS41_11470 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CCS41_11100 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D CCS41_01385 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CCS41_07065 4-amino-4-deoxy-L-arabinose lipid A transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CCS41_07420 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CCS41_08475 lipid A phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CCS41_07710 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CCS41_10490 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CCS41_11410 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CCS41_08485 lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D CCS41_12970 lipopolysaccharide biosynthesis protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D CCS41_08490 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CCS41_09925 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D CCS41_07100 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CCS41_00960 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CCS41_01410 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CCS41_05465 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CCS41_08495 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CCS41_11850 O-antigen assembly polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D CCS41_11800 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CCS41_00970 UDP-N-acetylglucosamine 4-epimerase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:fsm01011] D CCS41_12145 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CCS41_10750 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CCS41_09455 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CCS41_09470 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CCS41_09485 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CCS41_09450 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCS41_00810 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CCS41_09475 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CCS41_09460 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CCS41_01440 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCS41_11455 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CCS41_00870 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D CCS41_00275 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CCS41_08135 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CCS41_09490 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CCS41_08125 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CCS41_09585 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCS41_03845 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCS41_06700 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D CCS41_13075 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CCS41_11095 murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CCS41_01180 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D CCS41_09625 murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D CCS41_00195 murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D CCS41_07915 cell division protein YceG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CCS41_11625 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_13285 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_07995 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_07495 murein lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:fsm01004] D CCS41_11525 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CCS41_11520 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CCS41_05230 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CCS41_11540 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CCS41_13890 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_11530 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCS41_08375 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CCS41_12105 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CCS41_07600 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CCS41_11130 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCS41_11250 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D CCS41_08525 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:fsm01008] D CCS41_13895 MbtH family protein K05375 mbtH; MbtH protein D CCS41_08025 phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] C 01006 Prenyltransferases [BR:fsm01006] D CCS41_05355 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CCS41_09535 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CCS41_12075 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CCS41_13275 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CCS41_04915 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CCS41_01370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:fsm01007] D CCS41_05750 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCS41_11010 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CCS41_01240 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CCS41_11460 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCS41_08435 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CCS41_07095 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CCS41_12810 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCS41_03820 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CCS41_09955 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CCS41_10400 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CCS41_11425 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CCS41_07780 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CCS41_01390 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CCS41_08270 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CCS41_12135 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CCS41_08250 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CCS41_08245 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CCS41_09965 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CCS41_13350 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CCS41_09400 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CCS41_09390 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CCS41_10770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCS41_00905 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D CCS41_07085 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CCS41_11835 dTDP-4-amino-4,6-dideoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:fsm00194] D CCS41_13500 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CCS41_13510 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CCS41_13515 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CCS41_13520 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CCS41_13525 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CCS41_13530 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CCS41_13535 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:fsm03000] D CCS41_04475 transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D CCS41_07170 transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D CCS41_08975 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D CCS41_00815 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D CCS41_11295 DNA-binding transcriptional regulator FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D CCS41_07800 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CCS41_12045 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D CCS41_14090 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CCS41_08050 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D CCS41_05340 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CCS41_09620 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CCS41_13840 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CCS41_03320 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CCS41_10755 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CCS41_07960 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CCS41_04065 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D CCS41_09545 transcriptional regulator K07724 ner; Ner family transcriptional regulator D CCS41_06205 hypothetical protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D CCS41_01695 hypothetical protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D CCS41_01740 hypothetical protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D CCS41_01780 hypothetical protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D CCS41_14220 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCS41_14545 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCS41_14565 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCS41_03195 transcriptional regulator K07726 K07726; putative transcriptional regulator D CCS41_14235 transcriptional regulator K07726 K07726; putative transcriptional regulator D CCS41_11595 transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D CCS41_06845 type II toxin-antitoxin system antitoxin, RelB/DinJ family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CCS41_15030 CopG family transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CCS41_06765 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CCS41_14875 hypothetical protein K05785 rfaH; transcriptional antiterminator RfaH D CCS41_08605 transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D CCS41_00630 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CCS41_05390 transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D CCS41_07635 DNA-binding transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D CCS41_08985 hypothetical protein K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1 D CCS41_11900 transcriptional regulator K07733 alpA; prophage regulatory protein D CCS41_06665 dipicolinate synthase K07733 alpA; prophage regulatory protein D CCS41_06890 transcriptional regulator K07733 alpA; prophage regulatory protein D CCS41_06945 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D CCS41_12030 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CCS41_03735 Crl family RNA polymerase assembly factor K11926 crl; sigma factor-binding protein Crl D CCS41_09505 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:fsm03021] D CCS41_10980 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CCS41_10320 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CCS41_13165 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CCS41_07310 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CCS41_03835 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CCS41_10505 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CCS41_12830 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D CCS41_11390 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CCS41_09365 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CCS41_13100 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CCS41_10350 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CCS41_12945 stringent starvation protein A K03599 sspA; stringent starvation protein A D CCS41_10510 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA D CCS41_10515 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D CCS41_06945 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D CCS41_03850 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CCS41_11790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:fsm03019] D CCS41_05725 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CCS41_03965 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CCS41_11735 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CCS41_01460 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CCS41_11780 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CCS41_03880 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CCS41_04555 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CCS41_01300 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CCS41_09600 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCS41_04545 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CCS41_11790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CCS41_11985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CCS41_03720 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCS41_13310 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCS41_13270 RNA chaperone Hfq K03666 hfq; host factor-I protein D CCS41_06940 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CCS41_13335 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CCS41_12140 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CCS41_10220 ribonuclease E inhibitor B K09893 rraB; regulator of ribonuclease activity B D CCS41_11375 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:fsm03011] D CCS41_09055 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CCS41_12050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CCS41_10880 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CCS41_10975 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CCS41_10935 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CCS41_01260 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CCS41_10825 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CCS41_10920 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CCS41_12940 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CCS41_10840 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CCS41_10970 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CCS41_10820 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CCS41_10965 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CCS41_10915 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CCS41_04540 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CCS41_10455 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CCS41_10895 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CCS41_01250 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CCS41_10870 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CCS41_08480 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CCS41_07320 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CCS41_10340 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CCS41_10865 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CCS41_10845 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CCS41_10850 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CCS41_10910 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CCS41_10925 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CCS41_01245 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CCS41_10335 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CCS41_10345 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CCS41_10330 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CCS41_12935 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CCS41_10900 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CCS41_10885 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CCS41_10985 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CCS41_10930 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CCS41_10470 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CCS41_08255 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CCS41_09530 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CCS41_10875 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CCS41_10860 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CCS41_10905 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CCS41_09525 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CCS41_10890 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CCS41_10940 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CCS41_11600 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CCS41_11515 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CCS41_03575 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CCS41_11565 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CCS41_08260 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CCS41_10960 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CCS41_13050 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CCS41_00265 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCS41_10250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCS41_04655 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCS41_01430 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCS41_00260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:fsm03009] D CCS41_03965 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CCS41_07410 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CCS41_01460 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CCS41_03970 GTPase Era K03595 era; GTPase D CCS41_01345 obgE; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D CCS41_06945 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D CCS41_13100 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CCS41_10350 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CCS41_13065 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CCS41_03755 ksgA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CCS41_01010 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CCS41_05235 16S rRNA (guanine(1207)-N(2))-methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D CCS41_11705 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CCS41_05690 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CCS41_13545 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CCS41_09500 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CCS41_10710 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CCS41_02335 16S rRNA (guanine(1516)-N(2))-methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D CCS41_13475 23S rRNA (guanosine(2251)-2'-O)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CCS41_03860 23S rRNA (uridine(2552)-2'-O)-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CCS41_08140 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CCS41_12825 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D CCS41_06725 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D CCS41_10420 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CCS41_07155 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CCS41_11505 23S rRNA pseudouridine(955/2504/2580) synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CCS41_04615 23S rRNA pseudouridine(1911/1915/1917) synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CCS41_05245 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CCS41_10460 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CCS41_01265 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CCS41_00305 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D CCS41_05725 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CCS41_05700 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CCS41_13305 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D CCS41_04555 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CCS41_03035 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D CCS41_01455 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CCS41_10385 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D CCS41_13265 GTPase HflX K03665 hflX; GTPase D CCS41_09030 L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CCS41_13160 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CCS41_01125 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CCS41_01140 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CCS41_08175 ribosome silencing factor K09710 ybeB; ribosome-associated protein D CCS41_04580 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D CCS41_03855 RNA-binding protein K07574 yhbY; RNA-binding protein D CCS41_05460 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D CCS41_08380 ribosome modulation factor K03812 rmf; ribosome modulation factor D CCS41_11385 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D CCS41_07755 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D CCS41_11510 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:fsm03016] D CCS41_07355 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CCS41_05750 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCS41_01390 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CCS41_08435 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CCS41_12810 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCS41_11460 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCS41_03820 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CCS41_12135 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CCS41_09955 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CCS41_08270 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CCS41_07780 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CCS41_01240 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CCS41_07095 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CCS41_10400 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CCS41_08250 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CCS41_08245 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CCS41_11010 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CCS41_07890 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CCS41_09640 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CCS41_04025 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CCS41_01120 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CCS41_03315 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCS41_09030 L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CCS41_13275 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CCS41_11545 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CCS41_13550 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CCS41_08180 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CCS41_11560 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CCS41_10715 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CCS41_12005 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D CCS41_01235 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CCS41_11135 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CCS41_11425 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CCS41_10640 tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CCS41_12780 tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D CCS41_07965 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CCS41_13235 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CCS41_00280 carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D CCS41_11290 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D CCS41_10465 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CCS41_11185 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D CCS41_07810 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CCS41_01210 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CCS41_10815 sulfurtransferase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CCS41_10810 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CCS41_10805 sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CCS41_13245 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CCS41_05310 tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D CCS41_02735 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CCS41_08560 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CCS41_06930 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CCS41_06925 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CCS41_06730 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CCS41_02730 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CCS41_13130 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CCS41_06920 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D CCS41_11120 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CCS41_07325 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CCS41_13290 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CCS41_01185 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CCS41_11735 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CCS41_04545 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CCS41_13780 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CCS41_15070 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CCS41_03075 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:fsm03012] D CCS41_07580 stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1 D CCS41_01130 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CCS41_08265 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CCS41_13465 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CCS41_12055 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CCS41_10835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CCS41_10830 fusA; elongation factor G K02355 fusA; elongation factor G D CCS41_07725 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CCS41_12065 ribosome recycling factor K02838 frr; ribosome recycling factor D CCS41_07720 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CCS41_07750 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CCS41_07975 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CCS41_03715 efp; elongation factor P K02356 efp; elongation factor P D CCS41_04595 elongation factor P lysine(34) lysyltransferase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D CCS41_03710 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D CCS41_00295 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] C 03110 Chaperones and folding catalysts [BR:fsm03110] D CCS41_10645 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D CCS41_04625 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CCS41_08540 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CCS41_09520 HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D CCS41_00850 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CCS41_03720 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCS41_13310 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCS41_03725 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CCS41_03775 molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein D CCS41_08960 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CCS41_12560 heat-shock protein K04080 ibpA; molecular chaperone IbpA D CCS41_13315 groES; co-chaperone GroES K04078 groES; chaperonin GroES D CCS41_01340 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D CCS41_13535 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CCS41_04360 hypothetical protein K03071 secB; preprotein translocase subunit SecB D CCS41_11980 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D CCS41_01075 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CCS41_08550 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D CCS41_10800 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D CCS41_08445 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D CCS41_12915 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D CCS41_03765 peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D CCS41_11785 thioredoxin K03671 TXN; thioredoxin D CCS41_03690 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1 D CCS41_12000 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CCS41_12255 protein disulfide oxidoreductase DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CCS41_00820 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D CCS41_05425 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CCS41_08350 dipZ; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] C 04131 Membrane trafficking [BR:fsm04131] D CCS41_10425 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CCS41_00805 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCS41_09655 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCS41_07490 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCS41_00850 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:fsm03051] D CCS41_00850 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:fsm03032] D CCS41_00180 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CCS41_10265 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D CCS41_08240 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CCS41_09060 hypothetical protein K05788 ihfB; integration host factor subunit beta D CCS41_11570 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D CCS41_00420 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D CCS41_06035 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D CCS41_05585 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D CCS41_06225 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D CCS41_03170 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D CCS41_07315 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CCS41_00375 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CCS41_02775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCS41_13140 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCS41_11575 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCS41_07090 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CCS41_12800 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCS41_07905 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCS41_00170 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCS41_00835 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCS41_05240 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CCS41_13145 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CCS41_04920 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CCS41_11020 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CCS41_13115 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D CCS41_00565 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D CCS41_04880 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CCS41_11585 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CCS41_06910 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CCS41_09680 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CCS41_07165 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CCS41_14380 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D CCS41_00790 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:fsm03036] D CCS41_03965 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CCS41_00760 transcriptional regulator K03746 hns; DNA-binding protein H-NS D CCS41_10265 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D CCS41_08240 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CCS41_09060 hypothetical protein K05788 ihfB; integration host factor subunit beta D CCS41_11570 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D CCS41_10695 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D CCS41_04605 heat-shock protein HspQ K11940 hspQ; heat shock protein HspQ D CCS41_11740 DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein D CCS41_07960 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CCS41_13270 RNA chaperone Hfq K03666 hfq; host factor-I protein D CCS41_07800 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CCS41_10480 chromosome partitioning protein MukE K03804 mukE; chromosome partition protein MukE D CCS41_10485 condensin subunit MukF K03633 mukF; chromosome partition protein MukF D CCS41_09440 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CCS41_13000 cell division protein FtsB K05589 ftsB; cell division protein FtsB D CCS41_11715 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CCS41_09490 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CCS41_07795 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CCS41_09495 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D CCS41_09510 hypothetical protein K03591 ftsN; cell division protein FtsN D CCS41_09445 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D CCS41_09465 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CCS41_11720 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CCS41_09435 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CCS41_04925 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D CCS41_09945 Z-ring-associated protein K09888 zapA; cell division protein ZapA D CCS41_01190 septal ring assembly protein ZapB K09892 zapB; cell division protein ZapB D CCS41_01110 cell division protein ZapD K18778 zapD; cell division protein ZapD D CCS41_12925 cell division protein ZapE K06916 zapE; cell division protein ZapE D CCS41_11625 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_13285 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_13015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CCS41_11155 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CCS41_11150 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CCS41_11145 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CCS41_13115 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D CCS41_05710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CCS41_05715 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CCS41_05720 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CCS41_08130 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D CCS41_14015 cobalamin biosynthesis protein CbiA K03496 parA; chromosome partitioning protein D CCS41_14140 hypothetical protein K03496 parA; chromosome partitioning protein D CCS41_14200 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D CCS41_14260 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D CCS41_14370 peptidyl-arginine deiminase K03496 parA; chromosome partitioning protein D CCS41_06910 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CCS41_09680 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CCS41_13550 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CCS41_13545 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CCS41_01315 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CCS41_05420 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CCS41_08715 integrase K04763 xerD; integrase/recombinase XerD D CCS41_04335 Fe-S-binding ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D CCS41_12270 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:fsm03400] D CCS41_07280 O-6-alkylguanine-DNA--cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CCS41_07045 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CCS41_09635 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CCS41_07675 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CCS41_06425 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CCS41_03555 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CCS41_13390 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CCS41_12980 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CCS41_00780 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CCS41_04920 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CCS41_03740 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CCS41_01310 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCS41_10320 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CCS41_10980 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CCS41_13165 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CCS41_07855 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CCS41_04125 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CCS41_13280 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CCS41_13330 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D CCS41_04470 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CCS41_10380 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CCS41_05360 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CCS41_13140 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCS41_11575 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCS41_07090 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CCS41_12800 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCS41_07905 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCS41_00170 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCS41_00835 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCS41_05240 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CCS41_00375 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CCS41_02775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCS41_11020 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CCS41_06770 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CCS41_10590 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CCS41_06775 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CCS41_12180 recA; recombinase RecA K03553 recA; recombination protein RecA D CCS41_09725 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CCS41_09730 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CCS41_00425 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D CCS41_06030 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D CCS41_05590 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D CCS41_03165 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D CCS41_11605 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CCS41_01255 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D CCS41_04455 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CCS41_11580 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CCS41_13155 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCS41_03975 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CCS41_00845 recombination protein RecR K06187 recR; recombination protein RecR D CCS41_01215 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D CCS41_04880 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CCS41_11585 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CCS41_07165 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CCS41_10265 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D CCS41_07960 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CCS41_08240 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CCS41_09060 hypothetical protein K05788 ihfB; integration host factor subunit beta D CCS41_01300 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CCS41_00760 transcriptional regulator K03746 hns; DNA-binding protein H-NS D CCS41_08585 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CCS41_11725 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D CCS41_11110 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CCS41_08325 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:fsm03029] D CCS41_01130 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CCS41_08265 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CCS41_12055 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CCS41_10835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CCS41_10830 fusA; elongation factor G K02355 fusA; elongation factor G D CCS41_03970 GTPase Era K03595 era; GTPase D CCS41_12810 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCS41_11460 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCS41_00375 hypothetical protein K03111 ssb; single-strand DNA-binding protein D CCS41_02775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCS41_12090 bamA; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family D CCS41_03720 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCS41_08960 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CCS41_13310 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCS41_13315 groES; co-chaperone GroES K04078 groES; chaperonin GroES D CCS41_03725 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CCS41_03315 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCS41_12000 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CCS41_04335 Fe-S-binding ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D CCS41_01370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CCS41_11550 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCS41_00850 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:fsm02000] D CCS41_09110 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CCS41_13120 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CCS41_13125 multidrug ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CCS41_07385 type I secretion system permease/ATPase K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB D CCS41_09565 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CCS41_09570 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CCS41_08390 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CCS41_09670 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CCS41_03650 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CCS41_03660 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CCS41_03655 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CCS41_04510 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D CCS41_04515 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D CCS41_04520 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CCS41_03680 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D CCS41_03665 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D CCS41_03670 putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein D CCS41_03675 potG; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D CCS41_13340 D-ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D CCS41_12165 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CCS41_12170 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CCS41_12175 phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CCS41_12160 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CCS41_12155 anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D CCS41_13435 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CCS41_13430 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CCS41_13425 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CCS41_13420 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CCS41_11745 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein D CCS41_11750 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D CCS41_11755 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CCS41_03645 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D CCS41_03640 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D CCS41_03630 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D CCS41_03935 artP; amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CCS41_01395 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CCS41_01400 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D CCS41_01405 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CCS41_13405 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CCS41_13395 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CCS41_13400 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CCS41_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCS41_00755 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D CCS41_00745 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CCS41_00740 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CCS41_07630 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CCS41_07625 antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CCS41_07620 antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CCS41_07610 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D CCS41_03010 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CCS41_03015 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CCS41_03005 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CCS41_02270 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D CCS41_02275 iron ABC transporter K25133 hmuU; heme transport system permease protein D CCS41_01330 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D CCS41_03985 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D CCS41_03980 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D CCS41_11090 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CCS41_11080 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D CCS41_11085 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CCS41_00515 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D CCS41_00525 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D CCS41_00530 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D CCS41_00520 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein D CCS41_06690 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CCS41_06685 lipopolysaccharide ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CCS41_11395 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CCS41_07840 lipoprotein-releasing system transmembrane subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D CCS41_07850 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CCS41_07845 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CCS41_11720 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CCS41_11715 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CCS41_05150 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCS41_07525 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D CCS41_07480 MATE family multidrug exporter K26939 norM; MATE family, multidrug efflux pump D CCS41_02055 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CCS41_01285 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D CCS41_13070 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CCS41_01205 multidrug transporter EmrD K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D CCS41_14990 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CCS41_04935 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CCS41_04930 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D CCS41_11370 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D CCS41_04940 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CCS41_05905 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CCS41_06195 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CCS41_05375 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CCS41_07445 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CCS41_07440 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CCS41_07435 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CCS41_13375 cmtB; PTS mannitol transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CCS41_13380 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CCS41_13385 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CCS41_11380 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CCS41_01195 aquaporin K02440 glpF; glycerol uptake facilitator D CCS41_12945 stringent starvation protein A K03599 sspA; stringent starvation protein A D CCS41_01000 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D CCS41_07930 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D CCS41_09370 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CCS41_09375 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB D CCS41_09775 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D CCS41_09780 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D CCS41_01305 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D CCS41_04390 fluoride ion transporter CrcB K06199 crcB; fluoride exporter D CCS41_09960 porin K09476 ompF; outer membrane pore protein F D CCS41_08280 ompX; outer membrane protein OmpX K11934 ompX; outer membrane protein X D CCS41_01380 hypothetical protein K12678 aidA-I; autotransporter family porin D CCS41_10435 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin D CCS41_02970 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CCS41_12245 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CCS41_09695 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CCS41_14030 ABC transporter K12543 lapE; outer membrane protein, adhesin transport system D CCS41_12090 bamA; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family D CCS41_10390 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D CCS41_05330 outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D CCS41_04610 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D CCS41_05305 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D CCS41_00655 hypothetical protein K07278 tamA; translocation and assembly module TamA D CCS41_10315 hypothetical protein K21449 ata; trimeric autotransporter adhesin D CCS41_11400 lipopolysaccharide ABC transporter substrate-binding protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D CCS41_11405 lipopolysaccharide ABC transporter substrate-binding protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D CCS41_03770 LPS assembly protein LptD K04744 lptD; LPS-assembly protein D CCS41_12805 LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D CCS41_07260 hypothetical protein K13285 sipB; invasin B D CCS41_04810 hypothetical protein K13287 sipD; invasin D D CCS41_07270 hypothetical protein K13287 sipD; invasin D D CCS41_05000 hypothetical protein K15344 sseB; secreted effector protein SseB D CCS41_05010 hypothetical protein K15345 sseC; secreted effector protein SseC D CCS41_04585 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D CCS41_05265 lysine transporter K11733 lysP; lysine-specific permease D CCS41_07415 aromatic amino acid transporter AroP K11734 aroP; aromatic amino acid transport protein AroP D CCS41_02750 proline-specific permease ProY K11736 proY; proline-specific permease ProY D CCS41_02870 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D CCS41_03550 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CCS41_05660 hydrophobe/amphiphile efflux-1 family RND transporter K18324 acrD; multidrug efflux pump D CCS41_07460 multidrug DMT transporter K03297 emrE; small multidrug resistance pump D CCS41_07060 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D CCS41_08505 inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D CCS41_00545 putP; sodium/proline symporter K11928 putP; sodium/proline symporter D CCS41_13150 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CCS41_03730 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D CCS41_11465 K+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D CCS41_13455 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D CCS41_13460 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D CCS41_08755 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter D CCS41_01005 Trk system potassium transport protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D CCS41_00695 cytosine permease K10974 codB; cytosine permease D CCS41_15210 cytosine permease K10974 codB; cytosine permease D CCS41_04565 cytosine permease K10974 codB; cytosine permease D CCS41_08190 cytosine permease K10974 codB; cytosine permease D CCS41_05260 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein D CCS41_00270 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D CCS41_11840 lipid III flippase WzxE K16693 wzxE; enterobacterial common antigen flippase D CCS41_11455 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CCS41_00870 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D CCS41_00020 trkD; potassium transporter Kup K03549 kup; KUP system potassium uptake protein D CCS41_09465 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CCS41_00730 hypothetical protein K03832 tonB; periplasmic protein TonB D CCS41_09795 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CCS41_09790 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D CCS41_07390 HlyD family type I secretion periplasmic adaptor subunit K12532 rtxD; membrane fusion protein, RTX toxin transport system D CCS41_14035 hypothetical protein K12542 lapC; membrane fusion protein, adhesin transport system D CCS41_13015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CCS41_09665 multidrug efflux pump-associated protein, AcrZ family K25859 acrZ; accessory protein, multidrug efflux pump D CCS41_10660 macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D CCS41_04855 iron transporter K04758 feoA; ferrous iron transport protein A D CCS41_04845 ferrous iron transporter C K07490 feoC; ferrous iron transport protein C C 02044 Secretion system [BR:fsm02044] D CCS41_09695 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CCS41_07385 type I secretion system permease/ATPase K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB D CCS41_07390 HlyD family type I secretion periplasmic adaptor subunit K12532 rtxD; membrane fusion protein, RTX toxin transport system D CCS41_14035 hypothetical protein K12542 lapC; membrane fusion protein, adhesin transport system D CCS41_14030 ABC transporter K12543 lapE; outer membrane protein, adhesin transport system D CCS41_12840 hypothetical protein K02452 gspC; general secretion pathway protein C D CCS41_12845 hypothetical protein K02453 gspD; general secretion pathway protein D D CCS41_12850 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CCS41_12855 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D CCS41_12860 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D CCS41_12865 hypothetical protein K02457 gspH; general secretion pathway protein H D CCS41_12870 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D CCS41_12875 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D CCS41_12880 hypothetical protein K02460 gspK; general secretion pathway protein K D CCS41_12885 hypothetical protein K02461 gspL; general secretion pathway protein L D CCS41_13815 hypothetical protein K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CCS41_12895 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CCS41_00510 hypothetical protein K02465 gspS; general secretion pathway protein S D CCS41_10415 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D CCS41_11205 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CCS41_10570 prepilin-type cleavage/methylation domain-containing protein K02679 ppdA; prepilin peptidase dependent protein A D CCS41_10575 prepilin-type cleavage/methylation domain-containing protein K02680 ppdB; prepilin peptidase dependent protein B D CCS41_10585 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C D CCS41_11320 prepilin peptidase-dependent pilin K02682 ppdD; prepilin peptidase dependent protein D D CCS41_11315 type II secretion system protein GspE K02504 hofB; protein transport protein HofB D CCS41_11310 type IV pilin biogenesis protein K02505 hofC; protein transport protein HofC D CCS41_11065 pilus assembly protein HofM K12288 hofM; pilus assembly protein HofM D CCS41_11055 hypothetical protein K12289 hofN; pilus assembly protein HofN D CCS41_11050 hypothetical protein K12290 hofO; pilus assembly protein HofO D CCS41_11045 hypothetical protein K12291 hofP; pilus assembly protein HofP D CCS41_11040 hofQ; DNA transporter HofQ K02507 hofQ; protein transport protein HofQ D CCS41_08555 hypothetical protein K02237 comEA; competence protein ComEA D CCS41_09115 ComEC family protein K02238 comEC; competence protein ComEC D CCS41_04985 EscD/YscD/HrpQ family type III secretion system inner membrane ring protein K03220 yscD; type III secretion protein D D CCS41_05050 EscF/YscF/HrpA family type III secretion system needle major subunit K03221 yscF; type III secretion protein F D CCS41_09005 EscF/YscF/HrpA family type III secretion system needle major subunit K03221 yscF; type III secretion protein F D CCS41_05065 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D CCS41_05095 EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CCS41_09355 hypothetical protein K04057 yscP; type III secretion protein P D CCS41_07210 hypothetical protein K03225 yscQ; type III secretion protein Q D CCS41_05115 EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D CCS41_05120 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D CCS41_05125 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D CCS41_05130 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D CCS41_05090 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D CCS41_07235 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D CCS41_07245 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K22504 invG; type III secretion system outer membrane ring protein D CCS41_04400 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K22505 prgK; type III secretion system inner membrane ring protein D CCS41_07225 EscN/YscN/HrcN family type III secretion system ATPase K22506 spaL; type III secretion system ATPase [EC:7.4.2.8] D CCS41_07205 EscR/YscR/HrcR family type III secretion system export apparatus protein K22507 spaP; type III secretion system export apparatus protein D CCS41_07200 EscS/YscS/HrcS family type III secretion system export apparatus protein K22508 spaQ; type III secretion system export apparatus protein D CCS41_07190 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K22510 spaS; type III secretion system export apparatus switch protein D CCS41_07250 type III invasion protein K22511 invE; type III secretion system protein D CCS41_07230 hypothetical protein K22512 spaK; type III secretion system chaperone D CCS41_07220 type III needle complex assembly protein K22513 spaM; type III secretion system protein D CCS41_04395 hypothetical protein K22488 prgH; type III secretion system protein D CCS41_08995 hypothetical protein K22488 prgH; type III secretion system protein D CCS41_09010 hypothetical protein K22487 prgJ; type III secretion system protein D CCS41_09145 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CCS41_09190 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CCS41_09200 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CCS41_09170 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CCS41_09165 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CCS41_09160 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CCS41_09155 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CCS41_14600 murein transglycosylase K03194 virB1; type IV secretion system protein VirB1 D CCS41_14585 conjugal transfer protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D CCS41_14580 conjugal transfer protein K03200 virB5; type IV secretion system protein VirB5 D CCS41_14535 conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6 D CCS41_14530 conjugal transfer protein K03203 virB8; type IV secretion system protein VirB8 D CCS41_14525 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9 D CCS41_14510 hypothetical protein K03195 virB10; type IV secretion system protein VirB10 D CCS41_14495 conjugal transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D CCS41_12650 hypothetical protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D CCS41_12670 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D CCS41_12680 trbC; type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC D CCS41_12690 traW; type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW D CCS41_12695 trbI; type-F conjugative transfer system protein TrbI K12062 trbI; conjugal transfer pilin signal peptidase TrbI D CCS41_12700 traC; type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC D CCS41_12705 traV; type IV conjugative transfer system protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV D CCS41_12715 traK; type-F conjugative transfer system secretin TraK K12066 traK; conjugal transfer pilus assembly protein TraK D CCS41_12720 traE; type IV conjugative transfer system protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE D CCS41_12725 traL; type IV conjugative transfer system protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL D CCS41_05425 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CCS41_12655 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH D CCS41_13650 traJ; plasmid transfer ATPase TraJ K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8] D CCS41_13790 traJ; plasmid transfer ATPase TraJ K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8] D CCS41_13795 conjugal transfer protein K12204 dotC; defect in organelle trafficking protein DotC D CCS41_13800 conjugal transfer protein TraH K12205 dotD; defect in organelle trafficking protein DotD D CCS41_13740 conjugal transfer protein TraO K12209 icmE; intracellular multiplication protein IcmE D CCS41_15045 conjugal transfer protein TraO K12209 icmE; intracellular multiplication protein IcmE D CCS41_13720 TraT conjugal transfer protein K12212 icmJ; intracellular multiplication protein IcmJ D CCS41_15065 TraT conjugal transfer protein K12212 icmJ; intracellular multiplication protein IcmJ D CCS41_13745 conjugal transfer protein TraN K12213 icmK; intracellular multiplication protein IcmK D CCS41_15040 conjugal transfer protein K12213 icmK; intracellular multiplication protein IcmK D CCS41_15130 conjugal transfer protein TrbC K12217 icmO; intracellular multiplication protein IcmO [EC:7.2.4.8] D CCS41_13770 conjugal transfer protein K12222 icmT; intracellular multiplication protein IcmT D CCS41_15125 conjugal transfer protein TrbB K12228 trbB; TrbB protein D CCS41_12190 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D CCS41_12195 conjugal transfer protein K20528 trbC; type IV secretion system protein TrbC D CCS41_12200 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD D CCS41_12205 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D CCS41_12210 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D CCS41_12215 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D CCS41_12220 hypothetical protein K20267 trbH; type IV secretion system protein TrbH D CCS41_12230 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D CCS41_12235 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D CCS41_01380 hypothetical protein K12678 aidA-I; autotransporter family porin D CCS41_09420 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCS41_04360 hypothetical protein K03071 secB; preprotein translocase subunit SecB D CCS41_10355 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCS41_02715 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CCS41_01155 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCS41_10955 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCS41_10450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CCS41_11710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCS41_02725 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CCS41_11550 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCS41_09085 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D CCS41_09080 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CCS41_09075 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:fsm02042] D CCS41_12575 hypothetical protein K11014 cdtB; cytolethal distending toxin subunit B D CCS41_02025 hypothetical protein K11021 tccC; insecticidal toxin complex protein TccC C 02022 Two-component system [BR:fsm02022] D CCS41_13040 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CCS41_13045 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CCS41_07825 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CCS41_12285 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CCS41_12280 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CCS41_11970 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CCS41_11975 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CCS41_10685 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CCS41_04075 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D CCS41_04465 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CCS41_07010 two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CCS41_08295 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CCS41_04965 DNA-binding response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB D CCS41_09180 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC C 02035 Bacterial motility proteins [BR:fsm02035] D CCS41_09200 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CCS41_09165 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CCS41_09160 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CCS41_09155 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CCS41_09145 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CCS41_09195 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CCS41_09175 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D CCS41_09170 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CCS41_09190 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CCS41_09280 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D CCS41_09240 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CCS41_09275 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D CCS41_09360 flagellar biogenesis protein K02415 fliL; flagellar protein FliL D CCS41_09185 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D CCS41_09245 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CCS41_09250 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CCS41_09255 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D CCS41_09265 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CCS41_09270 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CCS41_09285 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CCS41_09260 hypothetical protein K02390 flgE; flagellar hook protein FlgE D CCS41_09290 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CCS41_09305 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D CCS41_09235 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D CCS41_09225 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D CCS41_09325 hypothetical protein K02406 fliC; flagellin D CCS41_09335 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D CCS41_09340 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CCS41_09365 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CCS41_09370 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CCS41_09375 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB D CCS41_09180 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D CCS41_11205 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CCS41_10415 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:fsm04812] D CCS41_05710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CCS41_14895 plasmid stabilization protein K18640 parM; plasmid segregation protein ParM D CCS41_07265 hypothetical protein K13286 sipC; invasin C D CCS41_09435 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CCS41_09440 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CCS41_11155 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CCS41_11150 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CCS41_11145 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CCS41_14015 cobalamin biosynthesis protein CbiA K03496 parA; chromosome partitioning protein D CCS41_14140 hypothetical protein K03496 parA; chromosome partitioning protein D CCS41_14200 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D CCS41_14260 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D CCS41_14370 peptidyl-arginine deiminase K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:fsm04147] D CCS41_00850 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CCS41_09600 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCS41_00805 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCS41_07490 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCS41_02745 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CCS41_13310 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCS41_03720 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCS41_13185 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCS41_04015 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CCS41_10835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CCS41_07890 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CCS41_11130 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCS41_00855 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CCS41_13030 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CCS41_01200 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CCS41_08205 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCS41_00470 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CCS41_10255 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CCS41_03695 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCS41_11105 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CCS41_11995 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CCS41_09655 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:fsm02048] D CCS41_02685 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CCS41_11020 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CCS41_13690 small toxic polypeptide K18920 hokA; protein HokA D CCS41_15095 small toxic polypeptide K18920 hokA; protein HokA D CCS41_12590 AbrB family transcriptional regulator K07172 mazE; antitoxin MazE D CCS41_06550 toxin ChpB K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D CCS41_06545 antitoxin ChpS K18842 chpS; antitoxin ChpS D CCS41_14240 toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D CCS41_14245 AbrB family transcriptional regulator K19156 prlF; antitoxin PrlF D CCS41_01935 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D CCS41_06840 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D CCS41_15025 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D CCS41_01595 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D CCS41_06845 type II toxin-antitoxin system antitoxin, RelB/DinJ family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CCS41_15030 CopG family transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CCS41_13825 antitoxin K18923 stbD; antitoxin StbD D CCS41_01600 plasmid stabilization protein K18923 stbD; antitoxin StbD D CCS41_13785 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D CCS41_05855 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D CCS41_05860 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D CCS41_14110 mRNA interferase K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D CCS41_14115 hypothetical protein K18843 hicB; antitoxin HicB D CCS41_13295 transcriptional regulator K05839 hha; haemolysin expression modulating protein D CCS41_13715 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4 D CCS41_13710 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4 D CCS41_14215 cytoplasmic protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D CCS41_14570 cytoplasmic protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D CCS41_14705 toxin K07334 higB-1; toxin HigB-1 D CCS41_12300 Killer protein K07334 higB-1; toxin HigB-1 D CCS41_14220 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCS41_14545 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCS41_14565 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCS41_14700 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D CCS41_12305 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D CCS41_13780 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CCS41_15070 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CCS41_03075 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CCS41_13775 AbrB family transcriptional regulator K18829 mvpT; antitoxin VapB D CCS41_15075 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D CCS41_14575 AbrB family transcriptional regulator K18829 mvpT; antitoxin VapB D CCS41_03080 AbrB family transcriptional regulator K18829 mvpT; antitoxin VapB D CCS41_13670 VapC toxin family PIN domain ribonuclease K07062 fitB; toxin FitB [EC:3.1.-.-] D CCS41_12490 VapC toxin family PIN domain ribonuclease K07062 fitB; toxin FitB [EC:3.1.-.-] D CCS41_11490 bssS; transcriptional regulator K12148 bssS; biofilm regulator BssS D CCS41_09435 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CCS41_05710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CCS41_06910 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CCS41_09680 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CCS41_05750 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCS41_05320 hypothetical protein K19168 cptA; toxin CptA D CCS41_05315 hypothetical protein K09159 cptB; antitoxin CptB D CCS41_03315 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:fsm01504] D CCS41_07825 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CCS41_13015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CCS41_09695 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CCS41_09960 porin K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:fsm03200] D CCS41_01950 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D CCS41_05810 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D CCS41_04340 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D CCS41_05615 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D CCS41_10100 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D CCS41_01545 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D CCS41_03140 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:fsm03100] D CCS41_01425 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCS41_05755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCS41_04645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCS41_06590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_02445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_11860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_04135 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCS41_11280 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CCS41_10230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCS41_13190 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCS41_02405 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CCS41_05405 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCS41_05400 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCS41_00255 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCS41_10245 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCS41_13205 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCS41_11170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCS41_02410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCS41_10360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCS41_11865 tRNA-His K14226 tRNA-His; tRNA His D CCS41_01420 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CCS41_04650 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CCS41_02400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_05410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_06680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_11870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_01150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCS41_09805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCS41_05735 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCS41_02865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCS41_05415 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_00680 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_01145 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_01170 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_01175 tRNA-Met K14230 tRNA-Met; tRNA Met D CCS41_06905 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CCS41_09920 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCS41_11875 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCS41_13035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCS41_06595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCS41_07705 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCS41_10370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCS41_04630 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCS41_10225 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CCS41_10365 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CCS41_07485 tRNA-Val K14237 tRNA-Val; tRNA Val D CCS41_05740 tRNA-Val K14237 tRNA-Val; tRNA Val D CCS41_05745 tRNA-Val K14237 tRNA-Val; tRNA Val D CCS41_10250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCS41_04655 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCS41_01430 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCS41_00260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCS41_00265 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCS41_08335 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CCS41_10715 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CCS41_11245 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CCS41_04945 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CCS41_00560 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CCS41_12985 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CCS41_04590 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CCS41_13915 hypothetical protein K22721 CSG1; inositol phosphorylceramide mannosyltransferase catalytic subunit [EC:2.4.1.370] D CCS41_04960 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CCS41_07135 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CCS41_09650 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CCS41_04685 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_04700 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_05530 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_02780 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_05925 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_05940 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_06085 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_06100 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_06170 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_06820 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_02345 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_02360 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_02495 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_02510 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_03385 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_04180 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_04190 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCS41_11200 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D CCS41_05685 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D CCS41_04440 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CCS41_07900 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CCS41_02255 alpha/beta hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D CCS41_01945 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_09895 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_05815 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_05985 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_04345 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_05610 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_10095 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_01550 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_03145 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CCS41_06960 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_12500 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_08065 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCS41_01020 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CCS41_11360 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CCS41_00015 ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CCS41_07690 electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D CCS41_07365 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D CCS41_07370 electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D CCS41_07105 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CCS41_07110 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CCS41_07115 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CCS41_07125 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CCS41_07130 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CCS41_08320 2Fe-2S ferredoxin K11107 yfaE; ferredoxin D CCS41_07685 electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CCS41_07680 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D CCS41_07375 electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D CCS41_00005 FMN-binding protein MioC K06205 mioC; MioC protein D CCS41_05345 flavodoxin K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D CCS41_11210 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CCS41_07565 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D CCS41_07570 lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D CCS41_09140 protoheme IX biogenesis protein HemY K02498 hemY; HemY protein D CCS41_09095 SCP2 domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D CCS41_09715 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D CCS41_07430 cold-shock protein K03704 cspA; cold shock protein D CCS41_05180 cold-shock protein K03704 cspA; cold shock protein D CCS41_05185 cold-shock protein K03704 cspA; cold shock protein D CCS41_01850 cold-shock protein K03704 cspA; cold shock protein D CCS41_03940 cold-shock protein K03704 cspA; cold shock protein D CCS41_03450 cold-shock protein K03704 cspA; cold shock protein D CCS41_10280 Rsd/AlgQ family anti-sigma factor K07740 rsd; regulator of sigma D D CCS41_00410 DNA-binding protein K07741 antB; anti-repressor protein D CCS41_05570 DNA-binding protein K07741 antB; anti-repressor protein D CCS41_06045 DNA-binding protein K07741 antB; anti-repressor protein D CCS41_12955 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CCS41_10650 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CCS41_01655 SsrA-binding protein K03664 smpB; SsrA-binding protein D CCS41_04870 Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D CCS41_05005 CesD/SycD/LcrH family type III secretion system chaperone K15368 sscA; secretion system chaperone SscA C 99976 Replication and repair D CCS41_03565 hypothetical protein K03630 radC; DNA repair protein RadC D CCS41_07970 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D CCS41_10700 YraN family protein K07460 yraN; putative endonuclease D CCS41_01025 DNA-protecting protein DprA K04096 smf; DNA processing protein D CCS41_07785 recombination factor protein RarA K07478 ycaJ; putative ATPase D CCS41_13765 hypothetical protein K06919 K06919; putative DNA primase/helicase D CCS41_01040 hypothetical protein K07480 insB; insertion element IS1 protein InsB D CCS41_13940 hypothetical protein K07483 K07483; transposase D CCS41_02115 hypothetical protein K07483 K07483; transposase D CCS41_06400 hypothetical protein K07483 K07483; transposase D CCS41_00210 IS110 family transposase K07486 K07486; transposase D CCS41_05635 IS110 family transposase K07486 K07486; transposase D CCS41_10215 IS110 family transposase K07486 K07486; transposase D CCS41_06615 IS110 family transposase K07486 K07486; transposase D CCS41_05790 IS110 family transposase K07486 K07486; transposase D CCS41_14690 IS110 family transposase K07486 K07486; transposase D CCS41_14950 IS110 family transposase K07486 K07486; transposase D CCS41_15190 IS110 family transposase K07486 K07486; transposase D CCS41_06795 IS110 family transposase K07486 K07486; transposase D CCS41_08095 IS110 family transposase K07486 K07486; transposase D CCS41_04300 IS110 family transposase K07486 K07486; transposase D CCS41_09300 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_09385 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_05170 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_14130 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_02185 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_00665 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_13580 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_05645 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_06315 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_02810 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_07550 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_08805 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_13175 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_12350 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D CCS41_09815 hypothetical protein K07497 K07497; putative transposase D CCS41_14045 transposase K07497 K07497; putative transposase D CCS41_12555 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CCS41_00840 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CCS41_07595 dipeptide/tripeptide permease A K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CCS41_02760 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family C 99978 Cell growth D CCS41_00725 septation protein A K06190 ispZ; intracellular septation protein D CCS41_04695 DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D CCS41_05520 DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D CCS41_06630 DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D CCS41_06830 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D CCS41_03380 DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D CCS41_04185 DNA recombinase K06400 spoIVCA; site-specific DNA recombinase D CCS41_04375 murein hydrolase activator EnvC K22719 envC; murein hydrolase activator C 99993 Cell motility D CCS41_07880 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D CCS41_03925 DNA transformation protein tfoX K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D CCS41_07980 RNA chaperone ProQ K03607 proQ; ProP effector D CCS41_08500 universal stress global response regulator UspA K06149 uspA; universal stress protein A D CCS41_08200 translational GTPase TypA K06207 typA; GTP-binding protein D CCS41_07360 hypothetical protein K07184 ygiM; SH3 domain protein C 99992 Structural proteins D CCS41_07790 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D CCS41_07735 lipoprotein localization factor LolB K02494 lolB; outer membrane lipoprotein LolB D CCS41_11805 polysaccharide chain length modulation protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D CCS41_08045 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D CCS41_12095 molecular chaperone K06142 hlpA; outer membrane protein D CCS41_03840 peptidase K06194 nlpD; lipoprotein NlpD D CCS41_04550 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D CCS41_11125 hypothetical protein K07285 slp; outer membrane lipoprotein D CCS41_06760 hypothetical protein K07286 yajG; uncharacterized lipoprotein C 99994 Others D CCS41_13415 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D CCS41_03750 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D CCS41_02265 hemin-degrading factor K07225 hmuS; putative hemin transport protein B B 09194 Poorly characterized C 99996 General function prediction only D CCS41_04050 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D CCS41_04435 molecular chaperone OsmY K04065 osmY; hyperosmotically inducible periplasmic protein D CCS41_07955 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D CCS41_07535 Fe-S cluster assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA D CCS41_07530 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CCS41_07520 signal peptide peptidase SppA K09015 sufD; Fe-S cluster assembly protein SufD D CCS41_08005 metal-dependent hydrolase K07038 K07038; inner membrane protein D CCS41_09415 yhjD; inner membrane protein YhjD K07058 K07058; membrane protein D CCS41_08340 exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D CCS41_07510 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D CCS41_10785 lysis protein K03745 slyX; SlyX protein D CCS41_04045 sporulation protein K03749 dedD; DedD protein D CCS41_11025 SPOR domain-containing protein K03112 damX; DamX protein D CCS41_00475 vancomycin high temperature exclusion protein K03748 sanA; SanA protein D CCS41_04005 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D CCS41_11700 hypothetical protein K08993 yhhL; putative membrane protein D CCS41_04770 hypothetical protein K09858 K09858; SEC-C motif domain protein D CCS41_06985 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D CCS41_08105 hypothetical protein K06890 K06890; uncharacterized protein D CCS41_10130 baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D CCS41_01515 baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D CCS41_12435 hypothetical protein K06903 W; Bacteriophage baseplate protein W D CCS41_10190 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D CCS41_08000 L-cystine transporter K06956 K06956; uncharacterized protein D CCS41_04445 hypothetical protein K07014 K07014; uncharacterized protein D CCS41_04450 hypothetical protein K07014 K07014; uncharacterized protein D CCS41_08595 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein D CCS41_13450 hypothetical protein K07070 K07070; uncharacterized protein D CCS41_09560 TIGR01777 family protein K07071 K07071; uncharacterized protein D CCS41_10705 hypothetical protein K07121 K07121; uncharacterized protein D CCS41_09745 hypothetical protein K07136 K07136; uncharacterized protein D CCS41_11555 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D CCS41_00825 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D CCS41_06835 hypothetical protein K09703 K09703; uncharacterized protein D CCS41_00690 DUF917 domain-containing protein K09703 K09703; uncharacterized protein D CCS41_09065 DUF917 domain-containing protein K09703 K09703; uncharacterized protein D CCS41_10495 hypothetical protein K09791 K09791; uncharacterized protein D CCS41_04380 hypothetical protein K09798 K09798; uncharacterized protein D CCS41_01665 RnfH family protein K09801 K09801; uncharacterized protein D CCS41_08920 hypothetical protein K09803 K09803; uncharacterized protein D CCS41_14455 hypothetical protein K09803 K09803; uncharacterized protein D CCS41_07925 oxidative stress defense protein K09807 K09807; uncharacterized protein D CCS41_07140 hypothetical protein K05952 K05952; uncharacterized protein D CCS41_04110 peroxide stress protein YaaA K09861 K09861; uncharacterized protein D CCS41_01115 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D CCS41_10270 hypothetical protein K09891 K09891; uncharacterized protein D CCS41_09610 hypothetical protein K09898 K09898; uncharacterized protein D CCS41_12920 cytochrome D ubiquinol oxidase subunit III K09908 K09908; uncharacterized protein D CCS41_08365 Ter macrodomain-binding protein MatP K09911 K09911; uncharacterized protein D CCS41_00800 transcriptional regulator K09916 K09916; uncharacterized protein D CCS41_13300 YoaH family protein K09917 K09917; uncharacterized protein D CCS41_01320 DUF484 domain-containing protein K09921 K09921; uncharacterized protein D CCS41_01100 hypothetical protein K09946 K09946; uncharacterized protein D CCS41_13005 hypothetical protein K09979 K09979; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024