+D GENES KO
#
KEGG Orthology (KO) - Francisella tularensis subsp. tularensis SCHU S4 NR-28534
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ftq00010]
D RO31_1515 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RO31_0804 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1071 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1537 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO31_1918 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RO31_1598 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO31_0085 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RO31_1601 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO31_1600 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RO31_1552 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RO31_0808 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO31_1599 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO31_0285 pyruvate phosphate dikinase, PEP/pyruvate binding domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_0286 PEP-utilizing enzyme, mobile domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_1743 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RO31_1742 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_1018 zinc-binding dehydrogenase family protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RO31_0870 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RO31_1333 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RO31_0466 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO31_0509 phosphoenolpyruvate carboxykinase family protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ftq00020]
D RO31_0076 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RO31_0094 acnA; aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RO31_1790 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RO31_0081 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RO31_0082 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_0571 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RO31_0572 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RO31_0079 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RO31_0080 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RO31_0077 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RO31_0078 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RO31_1880 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RO31_0345 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RO31_0610 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RO31_0509 phosphoenolpyruvate carboxykinase family protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RO31_1743 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RO31_1742 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ftq00030]
D RO31_1537 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO31_0906 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RO31_1602 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO31_1267 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RO31_1410 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RO31_0129 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RO31_0127 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RO31_0466 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO31_0769 prs; ribose-phosphate diphosphokinase family protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RO31_1598 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO31_1918 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:ftq00040]
D RO31_0868 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RO31_0906 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ftq00051]
D RO31_1554 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RO31_1016 cupin domain protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RO31_1699 phosphoglucomutase/phosphomannomutase, C-terminal domain protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RO31_1700 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RO31_1918 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RO31_1598 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO31_0085 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:ftq00052]
D RO31_1333 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RO31_1733 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RO31_1732 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RO31_0909 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO31_0868 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RO31_0466 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO31_1515 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RO31_0804 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1071 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1938 glycosyl hydrolases family 32 N-terminal domain protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:ftq00500]
D RO31_1938 glycosyl hydrolases family 32 N-terminal domain protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RO31_0868 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RO31_0467 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RO31_0469 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RO31_0464 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RO31_0470 glgP; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RO31_0462 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D RO31_0471 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RO31_1597 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D RO31_0466 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO31_1515 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RO31_0804 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1071 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1537 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO31_1554 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ftq00520]
D RO31_0814 carbohydrate binding domain protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RO31_2104 putative chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RO31_1840 glycosyl hydrolase family 3 N terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO31_1066 glycosyl hydrolase family 3 N terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO31_1357 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RO31_1554 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RO31_0685 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO31_0436 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO31_0084 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RO31_0435 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RO31_1756 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D RO31_2039 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RO31_1591 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RO31_1525 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RO31_1524 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RO31_1715 nucleotide sugar dehydrogenase family protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RO31_1714 polysaccharide biosynthesis family protein K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45]
D RO31_1719 short chain dehydrogenase family protein K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D RO31_1515 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RO31_0804 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1071 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_0466 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO31_0868 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RO31_1733 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RO31_1732 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RO31_0909 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO31_1537 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO31_1016 cupin domain protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RO31_1699 phosphoglucomutase/phosphomannomutase, C-terminal domain protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RO31_1700 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RO31_0467 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ftq00620]
D RO31_0870 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RO31_1743 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RO31_1742 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_1018 zinc-binding dehydrogenase family protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RO31_2084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RO31_2085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO31_1599 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO31_1760 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RO31_0534 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RO31_0535 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RO31_0402 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RO31_0342 FMN-dependent dehydrogenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RO31_0585 FMN-dependent dehydrogenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RO31_1349 4Fe-4S dicluster domain protein K18930 dld; D-lactate dehydrogenase
D RO31_0589 4Fe-4S dicluster domain protein K18930 dld; D-lactate dehydrogenase
D RO31_1415 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RO31_1645 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RO31_1053 putative NAD-dependent malic enzyme 2 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RO31_0610 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RO31_1880 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RO31_0345 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RO31_0509 phosphoenolpyruvate carboxykinase family protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RO31_0285 pyruvate phosphate dikinase, PEP/pyruvate binding domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_0286 PEP-utilizing enzyme, mobile domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_0288 HMGL-like family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ftq00630]
D RO31_0870 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RO31_0610 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RO31_0076 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RO31_0094 acnA; aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RO31_1351 FAD binding domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RO31_0587 FAD binding domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RO31_0555 HAD hydrolase, IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RO31_0223 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO31_1447 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO31_0459 aminotransferase class-V family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RO31_0460 aminotransferase class-V family protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RO31_0457 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_0935 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RO31_0458 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RO31_0886 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RO31_2007 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D RO31_0817 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RO31_2020 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:ftq00640]
D RO31_0870 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RO31_2084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RO31_2085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_1760 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RO31_0534 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RO31_0535 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RO31_0402 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RO31_0572 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RO31_0571 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:ftq00650]
D RO31_1794 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RO31_0079 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RO31_0080 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RO31_0077 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RO31_0078 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RO31_2047 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RO31_2086 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RO31_1067 short chain dehydrogenase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RO31_1069 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D RO31_0731 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO31_0733 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ftq00660]
D RO31_0731 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO31_0733 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO31_0572 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RO31_0571 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:ftq00562]
D RO31_1617 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RO31_0255 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D RO31_0085 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ftq00190]
D RO31_0033 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RO31_0034 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RO31_0035 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RO31_0036 nuoD; NADH dehydrogenase (quinone), D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RO31_0037 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RO31_0038 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RO31_0039 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RO31_0040 NADH dehydrogenase family protein K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RO31_0041 NADH-quinone oxidoreductase, chain I family protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RO31_0042 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RO31_0043 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RO31_0044 proton-translocating NADH-quinone oxidoreductase, chain L family protein K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RO31_0045 proton-translocating NADH-quinone oxidoreductase, chain M family protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RO31_0046 proton-translocating NADH-quinone oxidoreductase, chain N family protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RO31_1193 pyridine nucleotide-disulfide oxidoreductase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RO31_0079 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RO31_0080 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RO31_0077 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RO31_0078 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RO31_0323 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RO31_0322 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D RO31_0321 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D RO31_0320 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D RO31_0319 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D RO31_0101 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RO31_0317 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RO31_0100 cytochrome oxidase subunit II family protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RO31_0316 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RO31_0067 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RO31_0069 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RO31_0068 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RO31_0066 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RO31_0070 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RO31_0063 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RO31_0065 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RO31_0064 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RO31_1185 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RO31_1838 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ftq00710]
D RO31_1600 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RO31_1601 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO31_1598 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO31_1918 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RO31_1602 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO31_1410 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RO31_0085 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RO31_0906 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RO31_1267 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RO31_0509 phosphoenolpyruvate carboxykinase family protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RO31_0285 pyruvate phosphate dikinase, PEP/pyruvate binding domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_0286 PEP-utilizing enzyme, mobile domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_0610 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ftq00720]
D RO31_0285 pyruvate phosphate dikinase, PEP/pyruvate binding domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_0286 PEP-utilizing enzyme, mobile domain protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO31_0610 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RO31_1880 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RO31_0345 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RO31_0079 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RO31_0080 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RO31_0077 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RO31_0078 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RO31_0571 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RO31_0572 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RO31_1790 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RO31_0094 acnA; aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RO31_1760 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RO31_0534 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RO31_0535 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RO31_0402 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RO31_1028 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RO31_2085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO31_2084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RO31_0870 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ftq00680]
D RO31_1018 zinc-binding dehydrogenase family protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RO31_2007 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D RO31_1447 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO31_0808 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO31_0610 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RO31_1598 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO31_1918 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RO31_2084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RO31_2085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO31_0870 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RO31_1552 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RO31_1435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO31_0637 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RO31_0650 HAD phosphoserine phosphatase-like hydrolase, IB family protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ftq00910]
D RO31_0428 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RO31_0223 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO31_0678 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ftq00920]
D RO31_1209 cysN_C; sulfate adenylate transferase, subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RO31_1208 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RO31_1669 metallo-beta-lactamase superfamily protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D RO31_2079 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ftq00061]
D RO31_1760 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RO31_0534 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RO31_0535 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RO31_0402 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RO31_1609 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RO31_1607 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RO31_1606 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RO31_1610 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RO31_1330 enoyl-(Acyl carrier) reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1608 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1102 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1845 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RO31_0899 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RO31_1792 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1459 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ftq00071]
D RO31_1795 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RO31_1794 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RO31_1793 acyl-CoA dehydrogenase, N-terminal domain protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RO31_1792 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1459 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1018 zinc-binding dehydrogenase family protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D RO31_1609 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RO31_1607 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ftq00561]
D RO31_0886 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RO31_0148 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RO31_1605 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RO31_1303 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO31_2098 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO31_2099 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:ftq00564]
D RO31_1005 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RO31_0151 FAD binding domain protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RO31_1303 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO31_2098 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO31_2099 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO31_0255 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D RO31_0828 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RO31_1312 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RO31_0358 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RO31_1837 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D RO31_0964 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RO31_0432 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RO31_0360 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RO31_1149 phospholipase D family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RO31_1151 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D RO31_0255 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ftq00592]
D RO31_1795 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ftq01040]
D RO31_0171 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RO31_1825 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ftq00230]
D RO31_0127 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RO31_0466 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO31_0769 prs; ribose-phosphate diphosphokinase family protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RO31_2046 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RO31_1030 purD; phosphoribosylamine--glycine ligase K13713 purCD; fusion protein PurCD [EC:6.3.2.6 6.3.4.13]
D RO31_1031 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RO31_2103 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D RO31_2045 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RO31_1029 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RO31_1033 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RO31_1032 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RO31_0018 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RO31_0233 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RO31_0083 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RO31_0880 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RO31_0696 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RO31_0235 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RO31_1539 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RO31_0401 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RO31_1834 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RO31_1176 guaA; GMP synthase (glutamine-hydrolyzing), N-terminal domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RO31_1727 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RO31_0609 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RO31_0607 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RO31_0820 dGTPase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D RO31_0931 relA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RO31_1696 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RO31_1770 relA/SpoT family protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D RO31_0234 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RO31_1722 adenosine/AMP deaminase family protein K01488 add; adenosine deaminase [EC:3.5.4.4]
D RO31_1078 adenine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D RO31_1348 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RO31_0532 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D RO31_1208 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RO31_1209 cysN_C; sulfate adenylate transferase, subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ftq00240]
D RO31_1962 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RO31_1961 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RO31_1963 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RO31_1957 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RO31_1942 dihydroorotate dehydrogenase family protein K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RO31_0492 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RO31_1943 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RO31_0355 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RO31_0401 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RO31_0400 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RO31_0636 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RO31_0799 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RO31_1548 phosphorylase superfamily protein K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D RO31_0815 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RO31_2018 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RO31_1549 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RO31_1146 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RO31_0609 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RO31_0607 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RO31_0132 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RO31_0359 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RO31_0710 thymidine kinase family protein K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RO31_1434 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ftq00250]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1724 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RO31_0677 L-asparaginase, type I family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO31_0524 putative L-asparaginase periplasmic K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO31_0562 asparaginase family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO31_0921 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RO31_1711 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RO31_1662 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D RO31_0955 aminotransferase class I and II family protein K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D RO31_0234 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RO31_0018 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RO31_1963 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RO31_2047 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RO31_2086 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RO31_0428 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RO31_1337 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RO31_0223 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO31_1962 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RO31_1961 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RO31_0222 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RO31_0685 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO31_0436 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO31_2046 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ftq00260]
D RO31_0479 ACT domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RO31_0477 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RO31_0481 GHMP kinase N terminal domain protein K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RO31_0483 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RO31_1447 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO31_0886 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RO31_1552 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RO31_1435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO31_0637 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RO31_0650 HAD phosphoserine phosphatase-like hydrolase, IB family protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RO31_0813 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RO31_0812 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D RO31_0459 aminotransferase class-V family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RO31_0460 aminotransferase class-V family protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RO31_0457 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_0935 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RO31_0458 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RO31_0964 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RO31_0661 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RO31_2109 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RO31_2110 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ftq00270]
D RO31_0172 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RO31_0485 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RO31_0486 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RO31_0445 mtnN; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D RO31_0696 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RO31_0479 ACT domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RO31_0477 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RO31_0481 GHMP kinase N terminal domain protein K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RO31_0287 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO31_0408 glutamate-cysteine ligase family protein K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RO31_1064 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_2079 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RO31_0955 aminotransferase class I and II family protein K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D RO31_0610 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RO31_0661 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RO31_1435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO31_0637 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ftq00280]
D RO31_0287 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_1795 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RO31_1964 NAD binding domain of 6-phosphogluconate dehydrogenase family protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ftq00290]
D RO31_0731 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO31_0733 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO31_0736 acetohydroxy acid isomeroreductase, catalytic domain protein K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RO31_0730 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RO31_0287 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO31_0288 HMGL-like family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ftq00300]
D RO31_0479 ACT domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RO31_0477 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RO31_1785 pyridoxal-dependent decarboxylase, pyridoxal binding domain protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RO31_0029 pyridoxal-dependent decarboxylase, pyridoxal binding domain protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RO31_0473 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RO31_0475 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ftq00310]
D RO31_0629 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D RO31_0082 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_0456 cadA; lysine decarboxylase, inducible K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D RO31_2086 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:ftq00220]
D RO31_0222 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RO31_0223 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO31_1962 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RO31_1961 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RO31_0428 gdh; NAD-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:ftq00330]
D RO31_0487 pyridoxal-dependent decarboxylase, pyridoxal binding domain protein K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RO31_0489 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D RO31_0490 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D RO31_0486 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RO31_0485 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RO31_1833 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RO31_1337 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
D RO31_0759 hypothetical protein K01590 hdc; histidine decarboxylase [EC:4.1.1.22]
C 00350 Tyrosine metabolism [PATH:ftq00350]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1018 zinc-binding dehydrogenase family protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RO31_2086 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ftq00360]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_0821 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RO31_2026 peroxidase family protein K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RO31_2027 peroxidase family protein K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:ftq00380]
D RO31_0082 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_2075 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D RO31_0821 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RO31_2026 peroxidase family protein K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RO31_2027 peroxidase family protein K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ftq00400]
D RO31_1107 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RO31_1341 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RO31_0533 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RO31_0271 shikimate / quinate 5-dehydrogenase family protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RO31_1342 aroK; shikimate kinase 1 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RO31_0674 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RO31_1010 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RO31_2144 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RO31_1086 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RO31_2143 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RO31_2142 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RO31_2136 indole-3-glycerol phosphate synthase family protein K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D RO31_2109 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RO31_2110 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RO31_1947 chorismate mutase type II family protein K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D RO31_0963 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D RO31_0314 bacterial extracellular solute-binding s, 3 family protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D RO31_0659 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ftq00410]
D RO31_1627 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RO31_2047 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RO31_1626 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ftq00430]
D RO31_2047 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RO31_1376 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RO31_2085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO31_2084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ftq00450]
D RO31_0662 sufS; cysteine desulfurase, SufS family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RO31_0553 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RO31_1209 cysN_C; sulfate adenylate transferase, subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RO31_1509 metG; methionine--tRNA ligase, beta subunit K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ftq00460]
D RO31_1376 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RO31_0677 L-asparaginase, type I family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO31_0524 putative L-asparaginase periplasmic K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO31_0562 asparaginase family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO31_0921 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RO31_1447 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ftq00470]
D RO31_0655 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RO31_0212 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO31_0222 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RO31_1399 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RO31_0511 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RO31_0839 enzyme of enolase superfamily K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RO31_1785 pyridoxal-dependent decarboxylase, pyridoxal binding domain protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RO31_0029 pyridoxal-dependent decarboxylase, pyridoxal binding domain protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ftq00480]
D RO31_1376 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RO31_0258 allophanate hydrolase subunit 1 family protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D RO31_0408 glutamate-cysteine ligase family protein K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RO31_1064 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RO31_1540 cytosol aminopeptidase family, catalytic domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RO31_1268 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RO31_2134 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RO31_1099 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RO31_1790 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RO31_0835 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RO31_0486 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ftq00540]
D RO31_1844 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RO31_0216 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RO31_1846 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RO31_0324 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RO31_0491 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RO31_1843 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RO31_0123 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RO31_0905 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RO31_0798 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RO31_1184 hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RO31_1735 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RO31_1835 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RO31_0266 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RO31_0267 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RO31_1980 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ftq00541]
D RO31_0868 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RO31_0909 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO31_1706 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO31_1703 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RO31_1016 cupin domain protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RO31_1699 phosphoglucomutase/phosphomannomutase, C-terminal domain protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RO31_1700 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RO31_0435 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RO31_1719 short chain dehydrogenase family protein K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D RO31_1715 nucleotide sugar dehydrogenase family protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RO31_1714 polysaccharide biosynthesis family protein K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45]
C 00550 Peptidoglycan biosynthesis [PATH:ftq00550]
D RO31_1525 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RO31_1524 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RO31_0272 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RO31_0511 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RO31_0473 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RO31_0212 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO31_0475 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RO31_0357 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RO31_0510 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RO31_0934 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RO31_0794 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RO31_1186 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO31_0825 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_1198 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_2031 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_0625 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ftq00730]
D RO31_1429 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO31_1175 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RO31_0546 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RO31_1538 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RO31_1348 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ftq00740]
D RO31_1972 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RO31_1970 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RO31_1973 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RO31_1971 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RO31_1052 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:ftq00750]
D RO31_0326 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RO31_0637 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RO31_0483 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RO31_0580 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RO31_0581 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ftq00760]
D RO31_1724 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RO31_1726 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RO31_1725 nadC; nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RO31_0880 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RO31_0434 cytidyltransferase-like domain protein K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D RO31_1464 putative NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RO31_1800 nicotinate phosphoribosyltransferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D RO31_1680 ATP-NAD kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RO31_0779 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D RO31_2086 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ftq00770]
D RO31_0731 thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO31_0733 ACT domain protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO31_0736 acetohydroxy acid isomeroreductase, catalytic domain protein K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RO31_0730 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RO31_1625 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RO31_1624 hypothetical protein K24263 panG; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RO31_1626 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RO31_0126 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RO31_1628 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RO31_1334 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RO31_0665 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RO31_1745 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RO31_2048 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RO31_0287 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO31_1627 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ftq00780]
D RO31_1074 putative biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RO31_1522 methyltransferase domain protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RO31_1610 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RO31_1330 enoyl-(Acyl carrier) reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1608 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1102 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1845 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RO31_0899 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RO31_1081 alpha/beta hydrolase fold family protein K19561 bioJ; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D RO31_1075 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RO31_1077 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RO31_1073 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RO31_1076 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D RO31_0540 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ftq00785]
D RO31_1188 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RO31_0746 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RO31_0785 lipoyltransferase and lipoate-ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_1743 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RO31_1742 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RO31_0081 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RO31_0082 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RO31_0459 aminotransferase class-V family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RO31_0460 aminotransferase class-V family protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RO31_0457 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RO31_0935 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RO31_0458 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ftq00790]
D RO31_1094 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RO31_1083 folB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RO31_1082 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15]
D RO31_0352 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RO31_0403 folC; bifunctional FolC family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RO31_1972 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RO31_1085 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00670 One carbon pool by folate [PATH:ftq00670]
D RO31_0352 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RO31_1028 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RO31_1447 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO31_1031 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RO31_0233 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RO31_1063 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RO31_0457 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RO31_1434 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RO31_0817 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RO31_2020 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RO31_1423 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ftq00860]
D RO31_0346 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RO31_0191 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RO31_1065 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RO31_0522 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RO31_0295 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RO31_1648 uroporphyrinogen-III synthase HemD family protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RO31_0051 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RO31_1227 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RO31_1319 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RO31_0323 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RO31_1691 ferritin-like domain protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ftq00130]
D RO31_0989 chorismate lyase family protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D RO31_0988 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RO31_1420 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D RO31_1868 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RO31_1421 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RO31_1516 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RO31_0612 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RO31_0445 mtnN; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D RO31_0244 NADPH-dependent FMN reductase family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ftq00900]
D RO31_1175 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RO31_1849 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RO31_0810 hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RO31_0307 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RO31_1308 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RO31_0695 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RO31_0962 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RO31_1836 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RO31_1203 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RO31_0357 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ftq00907]
D RO31_1795 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RO31_1602 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ftq00523]
D RO31_1706 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO31_1703 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RO31_1703 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RO31_0776 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RO31_0699 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ftq00261]
D RO31_1209 cysN_C; sulfate adenylate transferase, subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RO31_0479 ACT domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RO31_0477 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ftq00521]
D RO31_1515 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RO31_0804 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1071 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_0466 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO31_1617 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RO31_1706 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO31_1703 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RO31_1515 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RO31_0804 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RO31_1071 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ftq00525]
D RO31_1706 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO31_1703 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RO31_2144 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RO31_1086 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RO31_2143 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RO31_1607 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RO31_1330 enoyl-(Acyl carrier) reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1608 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1102 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_0899 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RO31_1609 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ftq00999]
D RO31_0172 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RO31_0271 shikimate / quinate 5-dehydrogenase family protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ftq00362]
D RO31_1795 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RO31_1794 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ftq00625]
D RO31_1018 zinc-binding dehydrogenase family protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:ftq00633]
D RO31_0343 nfnB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
C 00642 Ethylbenzene degradation
D RO31_1795 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:ftq00626]
D RO31_1018 zinc-binding dehydrogenase family protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ftq03020]
D RO31_0167 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RO31_0168 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RO31_1693 RNA polymerase Rpb3/Rpb11 dimerization domain protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RO31_0389 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RO31_0800 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ftq03010]
D RO31_0210 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RO31_0353 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RO31_0371 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RO31_0388 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RO31_0381 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RO31_1224 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RO31_0362 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RO31_0378 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D RO31_1483 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D RO31_0364 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RO31_0387 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RO31_0361 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RO31_0386 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RO31_0377 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D RO31_0795 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RO31_0173 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RO31_0373 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RO31_1223 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RO31_0369 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RO31_1978 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RO31_0863 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RO31_1197 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RO31_0438 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RO31_0164 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RO31_0368 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RO31_0365 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RO31_0366 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RO31_0376 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RO31_0379 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RO31_0166 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RO31_1222 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RO31_0165 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10
D RO31_0163 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RO31_1482 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RO31_0374 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RO31_0383 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RO31_0372 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RO31_0390 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RO31_0380 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RO31_0176 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RO31_0943 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RO31_0888 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RO31_0370 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RO31_0367 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RO31_0375 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RO31_0770 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D RO31_0889 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RO31_1884 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RO31_0382 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RO31_0410 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RO31_1604 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RO31_1885 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RO31_0269 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RO31_0942 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RO31_0385 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RO31_1503 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_1571 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_2012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_1500 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_1568 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_2009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_1499 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_2008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_1567 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_0452 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ftq00970]
D RO31_1501 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RO31_2010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RO31_1569 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RO31_2000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RO31_1746 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RO31_0924 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RO31_1650 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RO31_2146 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RO31_1640 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RO31_0308 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RO31_0350 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RO31_0157 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RO31_1641 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RO31_1747 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RO31_0925 tRNA-His K14226 tRNA-His; tRNA His
D RO31_1502 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RO31_1570 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RO31_2011 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RO31_1692 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_0926 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_1639 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_0087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_1550 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RO31_1839 tRNA-Met K14230 tRNA-Met; tRNA Met
D RO31_0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D RO31_1932 tRNA-Met K14230 tRNA-Met; tRNA Met
D RO31_0922 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RO31_0923 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RO31_0865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RO31_1508 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RO31_0982 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RO31_2147 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RO31_0158 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RO31_0160 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RO31_0156 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RO31_0801 tRNA-Val K14237 tRNA-Val; tRNA Val
D RO31_1507 tRNA-Val K14237 tRNA-Val; tRNA Val
D RO31_1059 tRNA-Val K14237 tRNA-Val; tRNA Val
D RO31_0346 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RO31_0023 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RO31_0024 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RO31_0022 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RO31_0508 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RO31_1270 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RO31_0008 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO31_0472 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RO31_0877 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RO31_0940 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RO31_1553 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RO31_1899 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RO31_1509 metG; methionine--tRNA ligase, beta subunit K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RO31_1063 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RO31_0338 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RO31_1142 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO31_1051 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RO31_0219 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RO31_0527 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO31_1657 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO31_0057 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RO31_1158 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RO31_1157 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RO31_0786 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO31_1748 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ftq03060]
D RO31_0384 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RO31_0161 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RO31_0086 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RO31_1294 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RO31_1293 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RO31_1295 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RO31_0268 yidC; membrane protein insertase, YidC/Oxa1 family, N-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO31_0883 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO31_1762 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_2080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_1108 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RO31_0135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO31_1829 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO31_1050 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ftq04122]
D RO31_1429 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO31_2079 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RO31_0517 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D RO31_1976 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ftq03018]
D RO31_0184 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RO31_1432 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D RO31_0808 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO31_0796 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RO31_1095 helicase conserved C-terminal domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RO31_1826 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RO31_1728 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RO31_1698 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RO31_1478 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO31_2004 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO31_0719 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RO31_1838 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ftq03030]
D RO31_0624 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO31_0450 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO31_0217 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO31_0520 DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO31_0224 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RO31_0337 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RO31_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO31_1221 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RO31_1195 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RO31_2083 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RO31_0676 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RO31_1487 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RO31_1623 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ftq03410]
D RO31_0741 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RO31_1853 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RO31_0761 DNA-3-methyladenine glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RO31_0790 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RO31_0885 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RO31_1103 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RO31_0541 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO31_1623 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ftq03420]
D RO31_0737 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RO31_1534 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RO31_1401 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RO31_0893 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RO31_0136 uvrD/REP helicase N-terminal domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO31_1272 uvrD/REP helicase N-terminal domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO31_1623 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ftq03430]
D RO31_1761 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RO31_0549 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D RO31_0136 uvrD/REP helicase N-terminal domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO31_1272 uvrD/REP helicase N-terminal domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO31_1402 exonuclease family protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RO31_1389 exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RO31_1388 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RO31_0541 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO31_2083 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RO31_0450 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO31_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO31_0217 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO31_0224 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RO31_0520 DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO31_0624 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO31_0337 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RO31_1623 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ftq03440]
D RO31_0541 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO31_2083 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RO31_0874 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D RO31_1427 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RO31_0932 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RO31_2081 recA; protein RecA K03553 recA; recombination protein RecA
D RO31_0753 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RO31_1170 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RO31_0749 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RO31_1882 helicase conserved C-terminal domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO31_1630 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RO31_1633 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RO31_1629 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RO31_0450 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO31_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO31_0217 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO31_0224 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RO31_0520 DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO31_0624 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO31_0337 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RO31_0247 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ftq02010]
D RO31_0544 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D RO31_0644 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D RO31_0643 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D RO31_0642 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RO31_1892 toluene tolerance, Ttg2 family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RO31_1891 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RO31_1454 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RO31_1890 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RO31_1452 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RO31_1893 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RO31_1889 hypothetical protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RO31_1453 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RO31_1305 metQ; D-methionine-binding lipometQ domain protein K02072 metI; D-methionine transport system permease protein
D RO31_1304 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RO31_0137 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RO31_0139 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D RO31_0141 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D RO31_0142 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RO31_0143 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RO31_0454 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RO31_0455 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RO31_1541 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D RO31_1542 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D RO31_1181 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RO31_0122 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RO31_1559 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RO31_1558 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS)
D RO31_1489 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ftq03070]
D RO31_2049 outer membrane efflux family protein K12340 tolC; outer membrane protein
D RO31_1909 prepilin-type N-terminal cleavage/methylation domain protein K02456 gspG; general secretion pathway protein G
D RO31_1294 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RO31_1293 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RO31_0161 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RO31_0086 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RO31_0384 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RO31_1295 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RO31_0268 yidC; membrane protein insertase, YidC/Oxa1 family, N-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO31_0883 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO31_0135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO31_1762 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_2080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_1108 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ftq02020]
D RO31_0104 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RO31_1830 transcriptional regulatory, C terminal family protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D RO31_2064 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RO31_2067 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RO31_2066 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RO31_2065 K+-transporting ATPase, c chain family protein K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RO31_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RO31_0625 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO31_1053 putative NAD-dependent malic enzyme 2 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RO31_0223 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO31_1560 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D RO31_1026 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1024 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1025 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_0222 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RO31_0101 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RO31_0317 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RO31_0100 cytochrome oxidase subunit II family protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RO31_0316 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RO31_2049 outer membrane efflux family protein K12340 tolC; outer membrane protein
D RO31_0724 low molecular weight phosphotyrosine phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ftq02024]
D RO31_0719 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RO31_2144 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RO31_1086 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RO31_2143 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RO31_1107 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RO31_0104 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RO31_1830 transcriptional regulatory, C terminal family protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D RO31_2047 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RO31_0416 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_1783 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_1114 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_0543 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_1792 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1459 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1156 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RO31_1970 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RO31_0137 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RO31_0139 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D RO31_0141 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D RO31_0142 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RO31_0143 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RO31_0268 yidC; membrane protein insertase, YidC/Oxa1 family, N-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO31_0161 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RO31_0086 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RO31_0384 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RO31_1295 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RO31_0883 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO31_0135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO31_1762 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_2080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_1108 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RO31_0255 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D RO31_1194 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RO31_0808 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ftq01501]
D RO31_0075 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RO31_1840 glycosyl hydrolase family 3 N terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO31_1066 glycosyl hydrolase family 3 N terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO31_0137 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RO31_0139 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D RO31_0141 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D RO31_0142 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RO31_0143 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RO31_0776 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RO31_0699 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RO31_0119 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RO31_0118 MMPL family protein K18138 acrB; multidrug efflux pump
D RO31_2049 outer membrane efflux family protein K12340 tolC; outer membrane protein
D RO31_0794 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ftq01502]
D RO31_0212 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO31_0655 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RO31_0475 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RO31_0510 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RO31_0934 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RO31_0625 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ftq01503]
D RO31_0119 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RO31_0118 MMPL family protein K18138 acrB; multidrug efflux pump
D RO31_2049 outer membrane efflux family protein K12340 tolC; outer membrane protein
D RO31_1844 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ftq01000]
C 01001 Protein kinases [BR:ftq01001]
D RO31_1250 hipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RO31_0104 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RO31_2064 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ftq01009]
D RO31_0422 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D RO31_0650 HAD phosphoserine phosphatase-like hydrolase, IB family protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ftq01002]
D RO31_1050 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RO31_0778 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO31_0335 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RO31_1176 guaA; GMP synthase (glutamine-hydrolyzing), N-terminal domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RO31_2046 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RO31_0685 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO31_0436 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO31_1711 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RO31_0221 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D RO31_2134 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RO31_1035 peptidase M3 family protein K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D RO31_1411 peptidase M13 family protein K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RO31_0625 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO31_1543 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RO31_1544 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RO31_1540 cytosol aminopeptidase family, catalytic domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RO31_1268 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RO31_0441 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RO31_0697 metallopeptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RO31_2111 carboxypeptidase Taq (M32) metallopeptidase family protein K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RO31_1532 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RO31_0994 peptidase M48 family protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RO31_1186 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO31_0825 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_1198 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_2031 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_0713 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RO31_0715 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RO31_1829 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO31_2077 sppA; signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D RO31_0519 peptidase S49 family protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D RO31_0920 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D RO31_0783 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RO31_0921 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RO31_1376 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RO31_2051 peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RO31_0723 hflC; hflC protein K04087 hflC; modulator of FtsH protease HflC
D RO31_0722 hflK; hflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ftq01003]
D RO31_0469 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ftq01005]
D RO31_1844 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RO31_1843 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RO31_0216 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RO31_1846 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RO31_0324 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RO31_1922 PAP2 superfamily protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D RO31_0491 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RO31_0123 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RO31_0266 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RO31_0267 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RO31_1835 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RO31_0798 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RO31_1735 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RO31_1184 hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RO31_0905 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RO31_1441 glycosyl transferases group 1 family protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D RO31_1980 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RO31_1716 glycosyl transferases group 1 family protein K13004 wbtD; galacturonosyltransferase WbtD [EC:2.4.1.-]
D RO31_1712 glycosyl transferases group 1 family protein K13003 wbtG; glycosyltransferase WbtG [EC:2.4.1.-]
D RO31_1713 putative membrane protein K13009 wzy; O-antigen polymerase [EC:2.4.99.27]
D RO31_1681 glycosyl transferase 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RO31_0514 glycosyl transferase 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RO31_1718 bacterial sugar transferase family protein K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ftq01011]
D RO31_1525 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RO31_1524 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RO31_0272 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RO31_0511 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RO31_0473 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RO31_0212 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO31_0655 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RO31_1399 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RO31_0510 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RO31_0934 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RO31_0407 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RO31_0794 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RO31_1186 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO31_0825 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_1198 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_2031 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RO31_0625 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO31_0448 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RO31_1480 3D domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RO31_0186 N-acetylmuramoyl-L-alanine amidase family protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ftq01004]
D RO31_1607 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RO31_1606 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RO31_1610 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RO31_1330 enoyl-(Acyl carrier) reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1608 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1102 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO31_1845 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RO31_0899 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RO31_0171 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RO31_1825 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RO31_0870 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RO31_1792 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1459 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1605 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RO31_1303 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO31_2098 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO31_2099 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ftq01006]
D RO31_1836 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RO31_1203 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RO31_0357 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RO31_0718 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RO31_0988 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RO31_0323 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ftq01007]
D RO31_0346 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RO31_0508 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RO31_0786 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO31_1748 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RO31_1899 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RO31_0527 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO31_1509 metG; methionine--tRNA ligase, beta subunit K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RO31_1051 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RO31_0338 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RO31_1142 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO31_0219 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RO31_0008 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO31_0057 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RO31_0472 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RO31_0877 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RO31_1553 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RO31_1657 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO31_0940 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RO31_1270 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RO31_1158 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RO31_1157 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RO31_1019 degT/DnrJ/EryC1/StrS aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1354 aminotransferase class-V family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RO31_1658 aminotransferase class-V family protein K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D RO31_0813 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RO31_1075 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RO31_1077 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RO31_1065 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RO31_0287 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO31_1085 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RO31_0637 aminotransferase class-V family protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ftq00194]
D RO31_0070 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RO31_0069 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RO31_0068 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RO31_0067 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RO31_0066 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RO31_0065 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RO31_0064 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RO31_0063 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RO31_0062 ATP synthase I chain family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ftq03000]
D RO31_0633 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RO31_1872 bacterial regulatory helix-turn-helix, lysR family protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D RO31_0032 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RO31_1156 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RO31_1672 transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D RO31_0540 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RO31_2145 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D RO31_0980 sensory box protein K21829 dauR; D-arginine utilization repressor
D RO31_1166 helix-turn-helix family protein K07727 K07727; putative transcriptional regulator
D RO31_1337 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RO31_0631 metal-sensitive transcriptional repressor family protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RO31_1424 bolA-like family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RO31_1044 parB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO31_1136 hypothetical protein K07735 algH; putative transcriptional regulator
C 03021 Transcription machinery [BR:ftq03021]
D RO31_1693 RNA polymerase Rpb3/Rpb11 dimerization domain protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RO31_0389 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RO31_0167 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RO31_0168 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RO31_0800 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RO31_1194 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RO31_1291 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RO31_0054 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D RO31_1663 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RO31_0162 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D RO31_0518 glutaredoxin family protein K03599 sspA; stringent starvation protein A
D RO31_1484 glutathione S-transferase, N-terminal domain protein K03599 sspA; stringent starvation protein A
D RO31_1485 stringent starvation B family protein K03600 sspB; stringent starvation protein B
D RO31_1535 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D RO31_1698 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ftq03019]
D RO31_1432 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D RO31_2148 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D RO31_1828 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RO31_1826 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RO31_0263 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RO31_1095 helicase conserved C-terminal domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RO31_1728 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RO31_0808 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO31_0796 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RO31_1698 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RO31_1478 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO31_2004 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO31_0719 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RO31_1838 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RO31_0184 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RO31_1788 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ftq03011]
D RO31_0210 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RO31_0353 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RO31_0371 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RO31_0388 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RO31_0381 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RO31_1224 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RO31_0362 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RO31_0378 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D RO31_1483 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D RO31_0364 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RO31_0387 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RO31_0361 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RO31_0386 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RO31_0377 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D RO31_0795 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RO31_0173 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RO31_0373 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RO31_1223 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RO31_0369 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RO31_1978 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RO31_0863 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RO31_1197 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RO31_0438 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RO31_0164 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RO31_0368 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RO31_0365 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RO31_0366 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RO31_0376 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RO31_0379 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RO31_1222 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RO31_0165 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10
D RO31_0163 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RO31_0166 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RO31_1482 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RO31_0374 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RO31_0383 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RO31_0372 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RO31_0390 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RO31_0380 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RO31_0176 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RO31_0943 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RO31_0888 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RO31_0370 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RO31_0367 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RO31_0375 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RO31_0889 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RO31_1884 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RO31_0382 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RO31_0410 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RO31_1604 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RO31_1885 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RO31_0269 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RO31_0942 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RO31_0385 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RO31_0770 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D RO31_1499 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_2008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_1567 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_0452 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_1503 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_1571 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_2012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_1500 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_1568 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_2009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ftq03009]
D RO31_1828 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RO31_0263 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RO31_1353 era; GTP-binding protein Era K03595 era; GTPase
D RO31_2058 cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RO31_0054 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D RO31_1663 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RO31_0162 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D RO31_0531 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RO31_1618 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RO31_1545 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RO31_1457 RNA methyltransferase, RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RO31_1989 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RO31_0792 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RO31_0273 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RO31_1766 SAM-dependent methyltransferase family protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D RO31_0495 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RO31_1048 ftsJ-like methyltransferase family protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RO31_0194 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RO31_1061 methyltransferase domain protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D RO31_1220 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RO31_0803 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RO31_1218 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RO31_0060 pseudouridine synthase, RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RO31_1450 pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RO31_0203 acetyltransferase family protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RO31_1216 acetyltransferase family protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RO31_0174 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RO31_0592 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RO31_1900 prmB; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RO31_1432 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D RO31_2148 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D RO31_1137 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RO31_1728 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RO31_0546 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RO31_1527 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D RO31_1358 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D RO31_0720 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D RO31_0209 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RO31_0931 relA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RO31_0056 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RO31_0053 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D RO31_1276 hypothetical protein K09710 ybeB; ribosome-associated protein
D RO31_0705 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D RO31_0521 CRS1 / YhbY domain protein K07574 yhbY; RNA-binding protein
D RO31_1446 hypothetical protein K09889 yjgA; ribosome-associated protein
D RO31_1490 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D RO31_0774 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D RO31_1603 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ftq03016]
D RO31_0121 cca; multifunctional CCA domain protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RO31_0346 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RO31_1657 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO31_1051 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RO31_1142 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO31_1509 metG; methionine--tRNA ligase, beta subunit K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RO31_0508 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RO31_0527 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO31_0219 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RO31_0008 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO31_1270 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RO31_0940 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RO31_1553 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RO31_1899 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RO31_0338 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RO31_0057 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RO31_1158 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RO31_1157 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RO31_0786 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO31_1748 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RO31_1940 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RO31_1519 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RO31_1678 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RO31_1178 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RO31_1827 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RO31_1429 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO31_0209 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RO31_0718 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RO31_1492 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RO31_1407 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RO31_0990 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RO31_0293 RNB domain protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D RO31_0892 3'-5' exonuclease family protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RO31_2120 ccmA; heme ABC exporter, ATP-binding protein CcmA K06020 ettA; energy-dependent translational throttle protein EttA
D RO31_0472 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RO31_0877 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RO31_0211 cytidine and deoxycytidylate deaminase zinc-binding region family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RO31_0576 dusA; tRNA dihydrouridine synthase A family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RO31_0593 TIM-barrel, nifR3 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RO31_0707 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RO31_1488 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RO31_0175 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RO31_0523 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RO31_1287 RNA 2'-O ribose methyltransferase substrate binding family protein K03437 spoU; RNA methyltransferase, TrmH family
D RO31_1976 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RO31_1201 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RO31_1383 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RO31_0517 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D RO31_0663 iron-sulfur cluster assembly accessory family protein K13628 iscA; iron-sulfur cluster assembly protein
D RO31_1262 aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D RO31_1547 tRNA-(Ms(2)io(6)a)-hydroxylase, putative K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D RO31_1418 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RO31_1278 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RO31_1300 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RO31_1436 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RO31_1356 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RO31_0170 tRNA threonylcarbamoyl adenosine modification protein YgjD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RO31_0614 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RO31_1826 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RO31_0796 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ftq03012]
D RO31_0055 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RO31_0941 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RO31_0606 ABC transporter family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RO31_0354 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RO31_0159 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RO31_0363 fusA; translation elongation factor G K02355 fusA; elongation factor G
D RO31_0192 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RO31_0356 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D RO31_0193 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RO31_0775 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RO31_1111 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RO31_0264 efp; translation elongation factor P K02356 efp; elongation factor P
D RO31_0539 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D RO31_0859 kamA family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D RO31_0218 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RO31_0133 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ftq03110]
D RO31_2105 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RO31_0714 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RO31_0782 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RO31_0422 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D RO31_1478 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO31_2004 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO31_1477 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RO31_1774 dnaJ C terminal domain protein K05516 cbpA; curved DNA-binding protein
D RO31_1479 grpE family protein K03687 GRPE; molecular chaperone GrpE
D RO31_2135 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RO31_0845 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D RO31_2003 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D RO31_1532 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RO31_0063 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RO31_1762 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_2080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_0717 surA N-terminal domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RO31_1202 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D RO31_0961 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D RO31_1729 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RO31_0530 surA N-terminal domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RO31_1697 thioredoxin K03671 TXN; thioredoxin
D RO31_1123 thioredoxin K03671 TXN; thioredoxin
D RO31_0608 grxA; glutaredoxin-1 K03674 grxA; glutaredoxin 1
D RO31_0743 glutaredoxin 2, C terminal domain protein K03675 grxB; glutaredoxin 2
D RO31_0607 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RO31_0072 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D RO31_0120 disulfide bond formation DsbB family protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
C 04131 Membrane trafficking [BR:ftq04131]
D RO31_0401 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RO31_1601 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO31_1599 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO31_0422 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ftq03051]
D RO31_0422 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ftq03032]
D RO31_0676 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RO31_0716 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RO31_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RO31_1221 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RO31_1195 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RO31_2083 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RO31_0450 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO31_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO31_0337 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RO31_0224 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RO31_0520 DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO31_0624 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO31_0217 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO31_1487 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RO31_1623 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RO31_1850 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RO31_0579 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RO31_0444 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RO31_0187 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RO31_1042 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ftq03036]
D RO31_1828 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RO31_0716 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RO31_1774 dnaJ C terminal domain protein K05516 cbpA; curved DNA-binding protein
D RO31_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RO31_0719 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RO31_0214 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RO31_0809 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D RO31_0794 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RO31_1924 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RO31_0793 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RO31_0213 cell division FtsQ family protein K03589 ftsQ; cell division protein FtsQ
D RO31_0512 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RO31_0215 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RO31_0059 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE
D RO31_0119 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RO31_1886 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RO31_1887 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RO31_1888 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RO31_1043 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D RO31_1044 parB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO31_0444 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RO31_0187 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RO31_1407 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RO31_1989 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RO31_1765 phage integrase family protein K03733 xerC; integrase/recombinase XerC
D RO31_0177 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RO31_1147 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RO31_0725 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ftq03400]
D RO31_1781 methylated-DNA-[]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RO31_0977 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RO31_1321 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RO31_1853 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RO31_0761 DNA-3-methyladenine glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RO31_0741 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RO31_1134 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RO31_0950 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RO31_0359 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RO31_0978 FAD binding domain of DNA photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RO31_0885 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RO31_0790 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RO31_1103 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RO31_0541 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO31_1623 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RO31_1534 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RO31_1401 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RO31_0893 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RO31_0136 uvrD/REP helicase N-terminal domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO31_1272 uvrD/REP helicase N-terminal domain protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO31_0167 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RO31_0168 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RO31_1693 RNA polymerase Rpb3/Rpb11 dimerization domain protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RO31_0389 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RO31_0800 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RO31_0737 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RO31_1761 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RO31_0549 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D RO31_1402 exonuclease family protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RO31_1389 exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RO31_1388 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RO31_0450 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO31_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO31_0337 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RO31_0224 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RO31_0520 DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO31_0624 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO31_0217 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO31_2083 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RO31_1630 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RO31_1633 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RO31_1629 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RO31_2081 recA; protein RecA K03553 recA; recombination protein RecA
D RO31_0753 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RO31_1170 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RO31_0749 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RO31_0247 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RO31_1007 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RO31_0874 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D RO31_1882 helicase conserved C-terminal domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO31_1427 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RO31_0932 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RO31_1021 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RO31_1258 exonuclease, RdgC family protein K03554 rdgC; recombination associated protein RdgC
D RO31_0669 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RO31_1850 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RO31_0579 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RO31_1042 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RO31_0716 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RO31_2082 recX family protein K03565 recX; regulatory protein
D RO31_1261 uvrD/REP helicase N-terminal domain protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RO31_0609 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RO31_0607 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ftq03029]
D RO31_0055 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RO31_0941 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RO31_0354 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RO31_0159 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RO31_0363 fusA; translation elongation factor G K02355 fusA; elongation factor G
D RO31_1353 era; GTP-binding protein Era K03595 era; GTPase
D RO31_0786 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO31_1142 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO31_0008 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO31_0527 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO31_0023 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RO31_0024 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RO31_0022 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RO31_0698 DNA/RNA non-specific endonuclease family protein K01173 ENDOG; endonuclease G, mitochondrial
D RO31_2083 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RO31_1848 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D RO31_1478 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO31_1479 grpE family protein K03687 GRPE; molecular chaperone GrpE
D RO31_2004 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO31_2003 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D RO31_1477 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RO31_1669 metallo-beta-lactamase superfamily protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D RO31_1429 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO31_0072 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D RO31_1147 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RO31_0323 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RO31_0268 yidC; membrane protein insertase, YidC/Oxa1 family, N-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO31_0422 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ftq02000]
D RO31_0122 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RO31_0911 ABC transporter family protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D RO31_1559 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RO31_1558 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RO31_0503 ABC transporter family protein K15738 uup; ABC transport system ATP-binding/permease protein
D RO31_0544 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D RO31_0644 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D RO31_0643 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D RO31_0642 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RO31_0201 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RO31_0202 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RO31_0301 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RO31_0302 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RO31_1891 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RO31_1454 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RO31_1890 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RO31_1452 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RO31_1889 hypothetical protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RO31_1453 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RO31_1892 toluene tolerance, Ttg2 family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RO31_1893 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RO31_1305 metQ; D-methionine-binding lipometQ domain protein K02072 metI; D-methionine transport system permease protein
D RO31_1304 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RO31_0137 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RO31_0139 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D RO31_0141 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D RO31_0142 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RO31_0143 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RO31_0240 periplasmic solute binding family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D RO31_0238 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D RO31_0239 ABC transporter family protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D RO31_1541 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D RO31_1542 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D RO31_1181 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RO31_0454 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RO31_0455 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RO31_0831 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RO31_1682 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RO31_0830 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO31_1683 AAA domain protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO31_1684 putative aBC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO31_1118 sufC; feS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RO31_1731 galP; galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D RO31_1730 MFS transporter, sugar porter family protein K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D RO31_0927 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D RO31_1386 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D RO31_0259 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D RO31_0827 major Facilitator Superfamily protein K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D RO31_0075 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RO31_2052 drug resistance transporter, Bcr/CflA subfamily protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D RO31_1282 major Facilitator Superfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RO31_0891 major Facilitator Superfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RO31_0030 major Facilitator Superfamily protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D RO31_0557 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RO31_0558 major Facilitator Superfamily protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RO31_1461 H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RO31_1614 major Facilitator Superfamily protein K06141 tsgA; MFS transporter, TsgA protein
D RO31_1489 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RO31_0152 MIP channel s family protein K02440 glpF; glycerol uptake facilitator
D RO31_0780 ion channel family protein K10716 kch; voltage-gated potassium channel
D RO31_0518 glutaredoxin family protein K03599 sspA; stringent starvation protein A
D RO31_1484 glutathione S-transferase, N-terminal domain protein K03599 sspA; stringent starvation protein A
D RO31_0331 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D RO31_0332 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D RO31_0333 tetratricopeptide repeat family protein K07114 yfbK; Ca-activated chloride channel homolog
D RO31_0738 inhibitor of apoptosis-promoting Bax1 family protein K19416 yccA; modulator of FtsH protease
D RO31_0154 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D RO31_0537 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D RO31_1145 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D RO31_0966 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D RO31_0967 biopolymer transport ExbD/TolR family protein K03560 tolR; biopolymer transport protein TolR
D RO31_0296 crcB-like family protein K06199 crcB; fluoride exporter
D RO31_1915 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RO31_0771 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RO31_2049 outer membrane efflux family protein K12340 tolC; outer membrane protein
D RO31_1848 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D RO31_0189 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D RO31_1449 yfiO; outer membrane assembly lipoYfiO family protein K05807 bamD; outer membrane protein assembly factor BamD
D RO31_1979 smpA / OmlA family protein K06186 bamE; outer membrane protein assembly factor BamE
D RO31_1183 lipopolysaccharide-assembly, LptC-related family protein K11719 lptC; lipopolysaccharide export system protein LptC
D RO31_0846 ostA-like family protein K04744 lptD; LPS-assembly protein
D RO31_0529 organic solvent tolerance family protein K04744 lptD; LPS-assembly protein
D RO31_1143 lipopolysaccharide-assembly family protein K03643 lptE; LPS-assembly lipoprotein
D RO31_0704 transporter associated domain protein K06189 corC; hemolysin (HlyC) family protein
D RO31_1189 major Facilitator Superfamily protein K16210 togT; oligogalacturonide transporter
D RO31_1921 amino acid permease family protein K11733 lysP; lysine-specific permease
D RO31_1127 amino acid permease family protein K02205 rocE; arginine/ornithine permease
D RO31_0416 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_1783 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_1114 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_0543 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D RO31_0118 MMPL family protein K18138 acrB; multidrug efflux pump
D RO31_1285 BCCT transporter family protein K02168 betT; choline/glycine/proline betaine transport protein
D RO31_1917 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D RO31_1560 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D RO31_2095 nhaA; na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D RO31_1750 sodium/hydrogen exchanger family protein K03316 nhaP; Na+:H+ antiporter
D RO31_2073 sodium/hydrogen exchanger family protein K03316 nhaP; Na+:H+ antiporter
D RO31_0764 sodium/hydrogen exchanger family protein K26735 KEA4_5_6; K+:H+ antiporter
D RO31_1928 cation transport family protein K03498 trkH; trk/ktr system potassium uptake protein
D RO31_1115 NAD(P)-binding family protein K03499 trkA; trk/ktr system potassium uptake protein
D RO31_0954 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D RO31_0131 nupC; nucleoside permease nupC K11535 nupC; nucleoside transport protein
D RO31_0130 na+ dependent nucleoside transporter family protein K11535 nupC; nucleoside transport protein
D RO31_1772 tryptophan/tyrosine permease family protein K03834 tyrP; tyrosine-specific transport protein
D RO31_1990 tryptophan/tyrosine permease family protein K03834 tyrP; tyrosine-specific transport protein
D RO31_1764 amino acid permease family protein K03834 tyrP; tyrosine-specific transport protein
D RO31_1966 tryptophan/tyrosine permease family protein K03837 sdaC; serine transporter
D RO31_2112 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D RO31_1562 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family
D RO31_0407 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RO31_2125 lysE type translocator family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D RO31_1679 lysE type translocator family protein K05835 rhtC; threonine efflux protein
D RO31_0542 hypothetical protein K03548 perM; putative permease
D RO31_1416 conserved hypothetical integral membrane family protein K09125 yhhQ; queuosine precursor transporter
D RO31_0512 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RO31_0971 pal; outer membrane P6 domain protein K03640 pal; peptidoglycan-associated lipoprotein
D RO31_0968 tolA; protein TolA K03646 tolA; colicin import membrane protein
D RO31_0969 WD40-like Beta Propeller Repeat family protein K03641 tolB; TolB protein
D RO31_1462 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D RO31_0119 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RO31_0806 nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D RO31_2116 nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D RO31_0763 nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D RO31_0246 nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D RO31_1643 feoA domain protein K04758 feoA; ferrous iron transport protein A
D RO31_0284 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RO31_1284 tspO/MBR family protein K05770 TSPO; translocator protein
C 02044 Secretion system [BR:ftq02044]
D RO31_2049 outer membrane efflux family protein K12340 tolC; outer membrane protein
D RO31_1909 prepilin-type N-terminal cleavage/methylation domain protein K02456 gspG; general secretion pathway protein G
D RO31_0778 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO31_1026 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1024 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1025 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1313 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D RO31_1314 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC
D RO31_0265 prepilin-type N-terminal cleavage/methylation domain protein K02655 pilE; type IV pilus assembly protein PilE
D RO31_1219 tetratricopeptide repeat family protein K02656 pilF; type IV pilus assembly protein PilF
D RO31_1344 pilus assembly, PilP family protein K02665 pilP; type IV pilus assembly protein PilP
D RO31_1343 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D RO31_0095 twitching motility family protein K02669 pilT; twitching motility protein PilT
D RO31_1907 putative pilus assembly protein K02672 pilW; type IV pilus assembly protein PilW
D RO31_1536 type II transport GspH family protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RO31_0199 YGGT family protein K02221 yggT; YggT family protein
D RO31_0206 comEC/Rec2-related domain protein K02238 comEC; competence protein ComEC
D RO31_2035 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D RO31_1587 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D RO31_2036 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D RO31_1588 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D RO31_0883 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO31_1762 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_2080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RO31_1294 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RO31_0161 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RO31_1293 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RO31_0086 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RO31_0384 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RO31_1108 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RO31_0135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO31_1295 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RO31_0268 yidC; membrane protein insertase, YidC/Oxa1 family, N-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:ftq02042]
D RO31_1915 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RO31_0771 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RO31_0255 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:ftq02022]
D RO31_0104 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RO31_1830 transcriptional regulatory, C terminal family protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D RO31_2064 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RO31_1810 transcriptional regulatory, C terminal family protein K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:ftq02035]
D RO31_0095 twitching motility family protein K02669 pilT; twitching motility protein PilT
D RO31_1026 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1024 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1025 prepilin-type N-terminal cleavage/methylation domain protein K02650 pilA; type IV pilus assembly protein PilA
D RO31_1313 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D RO31_1314 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC
D RO31_0778 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO31_1219 tetratricopeptide repeat family protein K02656 pilF; type IV pilus assembly protein PilF
D RO31_1343 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D RO31_1344 pilus assembly, PilP family protein K02665 pilP; type IV pilus assembly protein PilP
D RO31_1907 putative pilus assembly protein K02672 pilW; type IV pilus assembly protein PilW
D RO31_0265 prepilin-type N-terminal cleavage/methylation domain protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ftq04812]
D RO31_0215 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RO31_0214 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RO31_1886 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RO31_1887 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RO31_1888 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RO31_1043 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D RO31_1044 parB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ftq04147]
D RO31_0422 htpG; chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D RO31_0808 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO31_1601 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO31_1600 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RO31_1599 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO31_0617 ahpC/TSA family protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RO31_2004 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO31_1478 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO31_1537 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO31_1539 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RO31_0159 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RO31_1519 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RO31_1792 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1459 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RO31_1348 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RO31_0083 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RO31_1733 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RO31_0464 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RO31_0148 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RO31_0223 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO31_0522 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RO31_1435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO31_0233 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RO31_1741 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RO31_0085 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RO31_0225 lipocalin-like domain protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:ftq02048]
D RO31_0669 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RO31_0671 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D RO31_0672 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RO31_1368 helicase conserved C-terminal domain protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RO31_1363 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RO31_1361 eco57I restriction-modification methylase family protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RO31_0595 N-6 DNA Methylase family protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RO31_0596 type I restriction modification DNA specificity domain protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RO31_1854 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D RO31_1250 hipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RO31_0215 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RO31_0444 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RO31_0187 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RO31_0346 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RO31_1338 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB
D RO31_1429 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:ftq04052]
D RO31_1800 nicotinate phosphoribosyltransferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ftq01504]
D RO31_2052 drug resistance transporter, Bcr/CflA subfamily protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D RO31_0776 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RO31_0699 beta-lactamase family protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RO31_0625 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO31_0119 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RO31_0118 MMPL family protein K18138 acrB; multidrug efflux pump
D RO31_2049 outer membrane efflux family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ftq00537]
D RO31_1597 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ftq03100]
D RO31_1501 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RO31_2010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RO31_1569 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RO31_2000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RO31_1746 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RO31_0924 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RO31_1650 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RO31_2146 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RO31_1640 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RO31_0308 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RO31_0350 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RO31_0157 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RO31_1641 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RO31_1747 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RO31_0925 tRNA-His K14226 tRNA-His; tRNA His
D RO31_1502 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RO31_1570 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RO31_2011 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RO31_1692 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_0926 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_1639 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_0087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RO31_1550 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RO31_1839 tRNA-Met K14230 tRNA-Met; tRNA Met
D RO31_0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D RO31_1932 tRNA-Met K14230 tRNA-Met; tRNA Met
D RO31_0922 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RO31_0923 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RO31_0865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RO31_1508 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RO31_0982 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RO31_2147 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RO31_0158 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RO31_0160 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RO31_0156 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RO31_0801 tRNA-Val K14237 tRNA-Val; tRNA Val
D RO31_1507 tRNA-Val K14237 tRNA-Val; tRNA Val
D RO31_1059 tRNA-Val K14237 tRNA-Val; tRNA Val
D RO31_1503 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_1571 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_2012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO31_1500 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_1568 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_2009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO31_1499 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_2008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_1567 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RO31_0452 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RO31_0096 deoxyribodipyrimidine photolyase, type II domain protein K18208 RNLS; renalase [EC:1.6.3.5]
D RO31_0098 flavin containing amine oxidoreductase family protein K18208 RNLS; renalase [EC:1.6.3.5]
D RO31_1105 flavodoxin-like fold family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D RO31_2138 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RO31_1283 peptide-methionine (S)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D RO31_1012 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RO31_0634 ahpC/TSA family protein K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RO31_0093 dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D RO31_1475 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RO31_0745 ferritin-like domain protein K02217 ftnA; ferritin [EC:1.16.3.2]
D RO31_1791 arsC family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RO31_0951 arsC family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RO31_2050 protein-L-isoaspartate(D-aspartate) O-methyltransferase family protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RO31_1820 methyltransferase domain protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RO31_0703 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RO31_1675 acetyltransferase family protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D RO31_1709 formyl transferase family protein K22885 K22885; dTDP-4-amino-4,6-dideoxyglucose formyltransferase [EC:2.3.1.-]
D RO31_1433 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RO31_1200 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RO31_0276 mitochondrial PGP phosphatase family protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D RO31_1688 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RO31_1192 glycosyl hydrolases 31 family protein K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D RO31_1191 glycosyl hydrolase family 31 protein K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D RO31_1974 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RO31_0451 polypeptide deformylase family protein K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RO31_1090 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RO31_0328 AAA domain family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RO31_0843 yjeF-related family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RO31_1310 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RO31_0494 mpl; L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RO31_0928 pgsB; poly-gamma-glutamate synthase PgsB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D RO31_0742 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RO31_1001 HAD ATPase, P-type, IC family protein K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RO31_2100 fdxA; ferredoxin-1 K05524 fdxA; ferredoxin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RO31_1988 alanine racemase, N-terminal domain protein K06997 yggS; PLP dependent protein
D RO31_0437 acetyltransferase domain protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D RO31_1518 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D RO31_1517 SCP-2 sterol transfer family protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D RO31_0047 membrane fusogenic activity family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
C 99999 Others
D RO31_0294 alpha/beta hydrolase fold family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RO31_0860 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D RO31_0439 cspC; cold shock-like protein CspC K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D RO31_0712 tig; trigger factor K03545 tig; trigger factor
D RO31_1382 smpB; ssrA-binding protein K03664 smpB; SsrA-binding protein
D RO31_0049 sigma-54 interaction domain protein K07391 comM; magnesium chelatase family protein
D RO31_1667 2OG-Fe(II) oxygenase superfamily protein K07394 K07394; SM-20-related protein
C 99976 Replication and repair
D RO31_0754 rmuC family protein K09760 rmuC; DNA recombination protein RmuC
D RO31_1034 archaeal holliday junction resolvase family protein K07460 yraN; putative endonuclease
D RO31_1704 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D RO31_1856 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D RO31_0958 DNA recombination-mediator A family protein K04096 smf; DNA processing protein
D RO31_0959 DNA recombination-mediator A family protein K04096 smf; DNA processing protein
D RO31_1694 mgsA AAA+ ATPase C terminal family protein K07478 ycaJ; putative ATPase
D RO31_1860 putative transposase K07488 K07488; transposase
C 99979 Viral proteins
C 99998 Others
D RO31_0933 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RO31_1162 major Facilitator Superfamily protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO31_1015 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D RO31_1160 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_0781 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_1097 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_0506 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_0648 putative membrane protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_0744 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_1439 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_1458 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_0565 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RO31_0253 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RO31_0979 sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D RO31_0957 aspT; aspartate-alanine antiporter K07085 K07085; putative transport protein
C 99978 Cell growth
D RO31_1513 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
D RO31_1808 hypothetical protein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D RO31_1930 proQ/FINO family protein K03607 proQ; ProP effector
D RO31_1373 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D RO31_0706 istB-like ATP binding family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D RO31_1925 lolA; outer membrane lipocarrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D RO31_0306 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D RO31_1869 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RO31_1378 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RO31_0243 putative outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D RO31_1847 outer membrane family protein K06142 hlpA; outer membrane protein
D RO31_0929 pgsC; poly-gamma-glutamate biosynthesis protein PgsC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D RO31_0829 hlyD secretion family protein K01993 ABC-2.TX; HlyD family secretion protein
C 99994 Others
D RO31_0559 KDPG and KHG aldolase family protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RO31_1169 mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein K03796 bax; Bax protein
D RO31_1451 mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein K03796 bax; Bax protein
D RO31_1331 chaB; cation transport regulator ChaB K06197 chaB; cation transport regulator
D RO31_0918 HAD hydrolase, IA, variant 3 family protein K07025 K07025; putative hydrolase of the HAD superfamily
D RO31_0797 iron-sulfur cluster assembly accessory family protein K15724 erpA; iron-sulfur cluster insertion protein
D RO31_1117 sufB; feS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RO31_1119 sufD; feS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RO31_0245 yihY; yihY family inner membrane domain protein K07058 K07058; membrane protein
D RO31_1649 fe-S metabolism associated domain protein K02426 sufE; cysteine desulfuration protein SufE
D RO31_1259 rhodanese-like domain protein K07146 K07146; UPF0176 protein
D RO31_0995 lemA family protein K03744 lemA; LemA protein
D RO31_1425 dedA; protein dedA K03975 dedA; membrane-associated protein
D RO31_1426 hypothetical protein K03975 dedA; membrane-associated protein
D RO31_1687 sulfite exporter TauE/SafE family protein K11312 K11312; cupin 2 domain-containing protein
D RO31_0620 phnA family protein K06193 phnA; protein PhnA
C 99997 Function unknown
D RO31_1813 hypothetical protein K06954 K06954; uncharacterized protein
D RO31_0684 dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D RO31_1104 zinc carboxypeptidase family protein K06987 K06987; uncharacterized protein
D RO31_0768 succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein
D RO31_1919 phospholipase/Carboxylesterase family protein K07018 K07018; uncharacterized protein
D RO31_0103 NAD dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein
D RO31_1110 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RO31_1668 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RO31_0406 sel1 repeat family protein K07126 K07126; uncharacterized protein
D RO31_1196 yqey-like family protein K09117 K09117; uncharacterized protein
D RO31_1187 hypothetical protein K09158 K09158; uncharacterized protein
D RO31_1666 hypothetical protein K09160 K09160; uncharacterized protein
D RO31_1736 trm112p-like family protein K09791 K09791; uncharacterized protein
D RO31_0651 integral membrane TerC family protein K09799 K09799; uncharacterized protein
D RO31_1380 rnfH Ubiquitin family protein K09801 K09801; uncharacterized protein
D RO31_1260 S1 domain protein K00243 K00243; uncharacterized protein
D RO31_1805 putative lipoprotein K09859 K09859; uncharacterized protein
D RO31_1998 hypothetical protein K09861 K09861; uncharacterized protein
D RO31_1422 hypothetical protein K09895 K09895; uncharacterized protein
D RO31_0903 hypothetical protein K09929 K09929; uncharacterized protein
D RO31_0902 hypothetical protein K09930 K09930; uncharacterized protein
D RO31_1953 hypothetical protein K09941 K09941; uncharacterized protein
D RO31_0890 hypothetical protein K09966 K09966; uncharacterized protein
D RO31_0254 hypothetical protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024