+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Francisella tularensis subsp. holarctica F92

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D F92_03020 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D F92_01020 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C F92_04350 era; GTPase Era K03595 era; GTPase C F92_10355 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C F92_10020 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C F92_03515 transcription antitermination factor K03625 nusB; transcription antitermination protein NusB C F92_09690 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D F92_08830 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D F92_08240 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D F92_03795 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D F92_00350 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D F92_08530 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D F92_00960 tetrapyrrole (corrin/porphyrin) methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D F92_01560 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] C 23S rRNA modification factors D F92_02775 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D F92_02335 rrmJ; 23S rRNA methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D F92_09535 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D F92_07135 rlmL; 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D F92_05685 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D F92_08480 rumA; 23S rRNA m(5)U1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D F92_05695 RNA pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D F92_09990 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D F92_03830 RNA pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C F92_05705 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C F92_09625 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C F92_01820 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C F92_05380 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] C F92_09325 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] B rRNA processing factors C F92_03020 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C F92_03935 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C F92_06735 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C F92_07770 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C F92_04350 era; GTPase Era K03595 era; GTPase C F92_08750 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C F92_02240 GTP-binding protein Der K03977 engA; GTPase C F92_10355 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C F92_04325 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A C F92_04960 protease, GTP-binding subunit K03665 hflX; GTPase B Other maturation factors C F92_10590 YrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C F92_07885 Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase/(p)ppGpp synthase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C F92_10010 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C F92_10025 hypothetical protein K09748 rimP; ribosome maturation factor RimP C F92_06065 putative iojap-like protein K09710 ybeB; ribosome-associated protein C F92_04885 hypothetical protein K07042 ybeY; probable rRNA maturation factor C F92_08870 hypothetical protein K07574 yhbY; RNA-binding protein C F92_03860 hypothetical protein K09889 yjgA; ribosome-associated protein C F92_06525 Ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor C F92_05255 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C F92_06325 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2025