+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Frieseomelitta varia

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E 122530644 mRNA cap guanine-N7 methyltransferase isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 122534922 mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] E 122536728 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E 122532494 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] D Cap binding complex E 122531726 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E 122535342 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E 122537369 cleavage and polyadenylation specificity factor subunit 5 isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 122538771 cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E 122530551 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E 122531878 uncharacterized protein LOC122531878 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E 122536911 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E 122527969 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 122533868 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 122529858 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 122528240 pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E 122532689 uncharacterized protein LOC122532689 K15542 PFS2; polyadenylation factor subunit 2 E 122531039 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2 E 122538544 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 122534556 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 122532692 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E 122539158 cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1 E 122538453 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 122532655 protein suppressor of forked K14408 CSTF3; cleavage stimulation factor subunit 3 E 122530755 symplekin isoform X1 K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E 122535340 small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B' E 122527151 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 122538865 probable small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E E 122538929 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F E 122530913 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G E 122536111 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 E 122537615 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E 122527969 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 122533868 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 122538453 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 122530755 symplekin isoform X1 K06100 SYMPK; symplekin E 122537540 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E 122537568 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4 E 122533386 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E 122528150 N6-adenosine-methyltransferase subunit METTL3 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E 122535489 N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E 122528177 N(6)-adenine-specific methyltransferase METTL4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] E 122532956 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E 122527693 pre-mRNA-splicing regulator WTAP-like isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP E 122538325 protein virilizer K22910 VIRMA; protein virilizer E 122529932 RNA-binding protein spenito K13190 RBM15; RNA-binding protein 15 E 122532540 zinc finger CCCH domain-containing protein 13-like isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 122536720 protein split ends isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 122538285 E3 ubiquitin-protein ligase Hakai K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E 122526831 poly(A) polymerase type 3 isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 122527060 poly(A) RNA polymerase gld-2 homolog A-like isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] E 122536740 speckle targeted PIP5K1A-regulated poly(A) polymerase-like isoform X1 K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] D Negative regulators of mRNA 3' end processing E 122535471 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1 E 122531371 RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26 E 122532589 uncharacterized protein LOC122532589 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D 122527241 DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17 D 122531182 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D 122538077 terminal nucleotidyltransferase 5C isoform X1 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] D 122537710 zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D 122530714 serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E 122532147 RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A E 122537567 protein mago nashi homolog K12877 MAGOH; protein mago nashi E 122534091 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4 E 122531037 ATP-dependent RNA helicase WM6 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 122529647 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 122528307 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174 E 122530929 protein CASC3 isoform X1 K14323 CASC3; protein CASC3 E 122531274 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E 122531434 pinin K13114 PNN; pinin E 122528728 apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus E 122532551 RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E 122528208 serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E 122534654 THO complex subunit 1-like isoform X1 K12878 THOC1; THO complex subunit 1 E 122528075 THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1 E 122537935 THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2 E 122535185 THO complex subunit 3 K12880 THOC3; THO complex subunit 3 E 122534091 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4 E 122533959 THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5 E 122530884 THO complex subunit 6 K13175 THOC6; THO complex subunit 6 E 122538004 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7 D TREX-2 complex E 122535648 PCI domain-containing protein 2 K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E 122533793 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1 E 122529057 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor E 122531033 cell division control protein 31-like K16466 CETN3; centrin-3 D Nuclear pore complex E 122538320 nucleoprotein TPR-like isoform X1 K09291 TPR; nucleoprotein TPR E 122538001 protein Rae1 K14298 RAE1; mRNA export factor E 122532860 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13 E 122539046 nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37 E 122539052 nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85 E 122533100 nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43 E 122532923 nuclear pore complex protein Nup50 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50 E 122529699 nuclear pore complex protein Nup54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54 E 122534383 nuclear pore glycoprotein p62 isoform X1 K14306 NUP62; nuclear pore complex protein Nup62 E 122533032 nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88 E 122527541 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93 E 122536548 nuclear pore complex protein Nup98-Nup96-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 122537418 nuclear pore complex protein Nup107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107 E 122538847 nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133 E 122529410 nucleoporin Nup188 K14311 NUP188; nuclear pore complex protein Nup188 E 122537784 nuclear pore complex protein Nup153-like isoform X1 K14296 NUP153; nuclear pore complex protein Nup153 E 122536838 nuclear pore complex protein Nup154 K14312 NUP155; nuclear pore complex protein Nup155 E 122535002 nuclear pore complex protein Nup160 homolog isoform X1 K14303 NUP160; nuclear pore complex protein Nup160 E 122533806 nucleoporin Nup35 K14313 NUP35; nuclear pore complex protein Nup53 E 122535052 nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205 E 122535280 nuclear pore membrane glycoprotein 210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210 E 122527823 nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45 E 122531860 nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1 E 122528193 RANBP2-like and GRIP domain-containing protein 1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E 122538114 LOW QUALITY PROTEIN: aladin-like K14320 AAAS; aladin E 122531695 nuclear pore complex protein DDB_G0274915-like isoform X1 K18716 NUP42; nucleoporin NUP42 E 122531033 cell division control protein 31-like K16466 CETN3; centrin-3 E 122528844 nucleoporin GLE1 isoform X1 K18723 GLE1; nucleoporin GLE1 E 122538729 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122538825 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122527854 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor E 122532937 NTF2-related export protein isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2 D Ran-mediated transport factors E 122531111 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran E 122534772 acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D E 122528164 ELAV-like protein 3 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 122535473 FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2 E 122535338 transitional endoplasmic reticulum ATPase TER94 K13525 VCP; transitional endoplasmic reticulum ATPase E 122537458 exportin-1 K14290 XPO1; exportin-1 E 122532810 exportin-7 isoform X1 K18460 XPO7; exportin-7 E 122530853 ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E 122538893 eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E E 122531957 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 122530556 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 122532702 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 122538246 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 122537633 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 122536012 eukaryotic translation initiation factor 4H-like isoform X1 K24086 EIF4H; translation initiation factor 4H E 122530557 eukaryotic translation initiation factor 4E-binding protein 2 isoform X1 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 E 122528306 nuclear factor of activated T-cells 5-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 122528467 protein angel homolog 2 K18729 ANGEL; protein angel E 122529500 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 122532243 cytoplasmic FMR1-interacting protein isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein E 122539041 gem-associated protein 5 K13133 GEMIN5; gem associated protein 5 E 122537176 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122527566 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122527986 putative ATP-dependent RNA helicase Pl10 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 122538195 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 122530466 polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein E 122532588 uncharacterized protein LOC122532588 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E 122538552 polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 E 122532856 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 122530356 deformed epidermal autoregulatory factor 1 K23041 DEAF1; deformed epidermal autoregulatory factor 1 E 122534089 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence E 122532959 density-regulated protein homolog K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E 122529871 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago E 122533328 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 122538451 heterogeneous nuclear ribonucleoprotein 27C isoform X1 K14411 MSI; RNA-binding protein Musashi E 122530144 RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi E 122530369 RNA-binding protein Musashi homolog Rbp6-like isoform X1 K14411 MSI; RNA-binding protein Musashi E 122532868 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein E 122536441 protein pelota K06965 PELO; protein pelota E 122534773 polyadenylate-binding protein 2-B K14396 PABPN1; polyadenylate-binding protein 2 E 122539203 DEAD-box helicase Dbp80 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E 122529931 pre-mRNA-splicing factor syf1 homolog K12867 SYF1; pre-mRNA-splicing factor SYF1 E 122530519 SAP domain-containing ribonucleoprotein isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein E 122526982 regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation E 122538573 la-related protein 6 K18733 LARP6; la-related protein 6 E 122536193 transcriptional activator protein Pur-beta isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha E 122528974 uncharacterized protein LOC122528974 K22414 POLDIP3; polymerase delta-interacting protein 3 E 122531523 leukocyte receptor cluster member 8 homolog isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E 122528394 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1 E 122531750 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3 E 122527054 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 122533376 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 122530498 regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E 122528668 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 122531905 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E 122529187 protein phosphatase PP2A 55 kDa regulatory subunit isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 122531449 uncharacterized protein LOC122531449 isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 122536299 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 122537291 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 122528320 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E 122532290 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 122538855 protein SMG5 K11125 SMG5; protein SMG5 E 122538211 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 122534811 protein SMG7-like isoform X1 K14409 SMG7; protein SMG7 E 122527162 protein SMG8 K18734 SMG8; protein SMG8 E 122536096 protein SMG9 K18735 SMG9; protein SMG9 E 122538195 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 122534908 probable ATP-dependent RNA helicase DHX34 isoform X1 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E 122532032 GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E 122527391 pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6 E 122537185 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 122531013 protein bicaudal D isoform X1 K18739 BICD; protein bicaudal D E 122538484 egalitarian protein homolog K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals E 122534106 T-box protein 2-like K10180 TBX6; T-box protein 6 E 122533615 nanos homolog 3 isoform X1 K18741 NANOS1; protein nanos 1 E 122530968 enhancer of split mgamma protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 122530970 enhancer of split mbeta protein-like isoform X1 K09090 HESN; hairy and enhancer of split, invertebrate E 122532199 enhancer of split m7 protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 122527027 protein hairy-like K09090 HESN; hairy and enhancer of split, invertebrate E 122527032 protein hairy-like K09090 HESN; hairy and enhancer of split, invertebrate D Trans-acting binding proteins E 122530074 far upstream element-binding protein 3 K13210 FUBP; far upstream element-binding protein E 122527353 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 122536660 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 122538852 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma E 122534268 arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 E 122532919 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 122534178 RNA-binding protein squid isoform X1 K03102 SQD; squid E 122534786 RNA-binding protein squid-like K03102 SQD; squid E 122537176 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122527566 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E 122529500 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 122532243 cytoplasmic FMR1-interacting protein isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein E 122536776 poly(rC)-binding protein 3-like K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 122526791 caprin homolog K18743 CAPRIN1; caprin-1 E 122533834 CUGBP Elav-like family member 2 isoform X1 K02177 BRU; bruno E 122531285 maternal protein exuperantia isoform X1 K18745 EXU; maternal protein exuperantia E 122526798 Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1 E 122532596 sex-lethal homolog isoform X1 K18747 SXL; protein sex-lethal C mRNA cycle factors D Common to processing body (P body) and stress granule E 122534905 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 122528959 protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C E 122529333 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 122538893 eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E E 122531957 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 122527054 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 122527986 putative ATP-dependent RNA helicase Pl10 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 122536473 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 122537847 RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E 122532372 protein LSM14 homolog B-A isoform X1 K18749 LSM14; protein LSM14 E 122526798 Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1 E 122531145 LIM domain-containing protein jub isoform X1 K16682 AJUBA; LIM domain-containing protein E 122527399 putative helicase mov-10-B.1 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E 122537665 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2 E 122533158 transportin-1 K18752 TNPO1; transportin-1 E 122532290 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 122538855 protein SMG5 K11125 SMG5; protein SMG5 E 122538211 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 122534811 protein SMG7-like isoform X1 K14409 SMG7; protein SMG7 E 122534719 protein TIS11 isoform X1 K15308 TTP; tristetraprolin E 122535964 huntingtin isoform X1 K04533 HD; huntingtin E 122535486 protein bicaudal C homolog 1-B isoform X1 K18756 BICC1; protein bicaudal C E 122533328 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 122534344 cAMP-dependent protein kinase catalytic subunit 1-like K04345 PKA; protein kinase A [EC:2.7.11.11] E 122527740 cAMP-dependent protein kinase catalytic subunit 1 K04345 PKA; protein kinase A [EC:2.7.11.11] E 122535144 la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1 E 122527070 ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L D P-body specific factors E 122538614 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 122538970 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 122537411 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 122529860 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 122534936 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 122531043 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 122534552 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 122538343 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 122530743 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 122527728 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E 122527936 kinesin light chain isoform X1 K10407 KLC; kinesin light chain E 122537185 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 122537642 tubulin alpha-1C chain-like isoform X1 K07374 TUBA; tubulin alpha E 122529970 tubulin alpha chain-like K07374 TUBA; tubulin alpha E 122532899 tubulin alpha-1 chain K07374 TUBA; tubulin alpha E 122533712 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 122534224 tubulin alpha chain-like K07374 TUBA; tubulin alpha E 122535190 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 122535540 tubulin alpha-1 chain-like isoform X1 K07374 TUBA; tubulin alpha E 122537176 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122527566 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122539041 gem-associated protein 5 K13133 GEMIN5; gem associated protein 5 E 122528810 protein Gawky isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein E 122537688 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 122534129 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 122537063 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 122532766 alpha-protein kinase 1 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 122538993 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 122532250 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 122530352 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 122536594 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 122535831 PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E 122528954 protein BTG2-like K14443 TOB; protein Tob/BTG E 122529275 protein BTG3-like K14443 TOB; protein Tob/BTG E 122533533 protein Tob1-like K14443 TOB; protein Tob/BTG E 122528306 nuclear factor of activated T-cells 5-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 122538423 protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 122526874 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 122537836 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 122533376 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 122530498 regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3 E 122528953 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 122538978 serine/arginine repetitive matrix protein 2 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 122537305 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E 122530481 YTH domain-containing family protein 3 K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E 122534367 nucleolysin TIAR K13201 TIA1; nucleolysin TIA-1/TIAR E 122535432 nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 122530466 polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein E 122532919 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 122529500 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 122534180 ras GTPase-activating protein-binding protein 1 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 122537510 eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A E 122535855 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E 122530556 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 122529647 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 122537633 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 122532702 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 122538246 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 122527493 ribosomal protein S6 kinase 2 beta isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E 122528666 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 122538729 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122538825 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122527854 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor E 122531511 histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E 122537077 tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3 E 122538485 la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4 B mRNA degradation factors C 5'-3' decay D Decapping complex E 122538970 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 122538614 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 122536473 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 122526874 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 122537836 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 122538423 protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E 122537411 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 122529860 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 122534936 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 122531043 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 122534552 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 122538343 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 122530743 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 122527728 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E 122534905 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 122536903 5'-3' exoribonuclease 2 homolog isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E 122530554 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 122531424 probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] C 3'-5' decay D Core exosome factors E 122527723 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 E 122537307 uncharacterized protein LOC122537307 K03679 RRP4; exosome complex component RRP4 E 122531639 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 E 122537669 exosome complex component RRP41 isoform X1 K11600 RRP41; exosome complex component RRP41 E 122533167 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46 E 122529789 exosome complex component MTR3-like K12587 MTR3; exosome complex component MTR3 E 122529007 exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42 E 122536875 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43 E 122527271 exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E 122531744 exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E 122539199 exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E 122530720 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1 E 122533672 M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E 122534904 terminal nucleotidyltransferase 4B-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 122536866 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E 122532856 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 122527660 tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3 E 122531054 WD repeat-containing protein 61 K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E 122538993 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 122537688 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 122534129 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 122537063 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 122532766 alpha-protein kinase 1 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 122532250 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 122539194 CCR4-NOT transcription complex subunit 9 isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 122538605 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E 122536594 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 122535831 PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E 122527531 pre-piRNA 3'-exonuclease trimmer-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 122536272 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 122526953 ATP-dependent DNA/RNA helicase DHX36 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 122528954 protein BTG2-like K14443 TOB; protein Tob/BTG E 122529275 protein BTG3-like K14443 TOB; protein Tob/BTG E 122533533 protein Tob1-like K14443 TOB; protein Tob/BTG E 122530554 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 122528869 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E 122531424 probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] E 122526797 nuclear exosome regulator NRDE2 isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2 E 122536480 protein Smaug homolog 1 K27396 SMG; protein Smaug E 122537769 focadhesin isoform X1 K27498 FOCAD; focadhesin C Other degradation factors D RNases E 122534863 probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E 122529585 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] E 122529029 oligoribonuclease-like isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-] E 122538757 probable oligoribonuclease isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E 122532892 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 122533942 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 122531326 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 122534494 ATP-dependent 6-phosphofructokinase isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E 122527036 heat shock 70 kDa protein cognate 5 isoform X1 K04043 dnaK; molecular chaperone DnaK E 122539201 heat shock protein 60A-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E 122537307 uncharacterized protein LOC122537307 K03679 RRP4; exosome complex component RRP4 E 122527723 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 D Cofactors E 122537669 exosome complex component RRP41 isoform X1 K11600 RRP41; exosome complex component RRP41 E 122529007 exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024