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Transcription Machinery - Gossypium arboreum (tree cotton)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E 108473439 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E 108450695 DNA-directed RNA polymerase II subunit 1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E 108483155 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E 108476814 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E 108457823 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E 108467743 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E 108484517 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E 108488393 DNA-directed RNA polymerase II subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E 108458059 DNA-directed RNA polymerases IV and V subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E 108454623 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E 108467910 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 108482061 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
D Pol I, II, III common subunits
E 108480204 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108467808 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108459811 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108456719 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108458156 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 108454636 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 108461382 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 108449972 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 108458370 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 108456277 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 108476113 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E 108476866 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
E 108455119 DNA-directed RNA polymerase IV subunit 1-like K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
E 108470020 DNA-directed RNA polymerase IV subunit 1-like K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
E 108486115 DNA-directed RNA polymerase V subunit 1 K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
E 108454175 DNA-directed RNA polymerase D subunit 2b-like K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
E 108472478 DNA-directed RNA polymerase V subunit 7 K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7
E 108450163 DNA-directed RNA polymerase V subunit 7 isoform X1 K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7
C Basal transcription factors
D TFIIA
E 108487289 transcription initiation factor IIA large subunit-like K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 108458102 transcription initiation factor IIA large subunit-like K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 108450427 transcription initiation factor IIA subunit 2 K03123 TFIIA2; transcription initiation factor TFIIA small subunit
E 108453378 transcription initiation factor IIA subunit 2 K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E 108474177 plant-specific TFIIB-related protein 1 isoform X1 K03124 TFIIB; transcription initiation factor TFIIB
E 108483551 transcription initiation factor IIB-2-like K03124 TFIIB; transcription initiation factor TFIIB
E 108459107 transcription initiation factor IIB-like K03124 TFIIB; transcription initiation factor TFIIB
E 108453985 transcription initiation factor IIB-2 K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E 108467550 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108472401 TATA-box-binding protein isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108461768 TATA-box-binding protein-like isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108489097 transcription initiation factor TFIID subunit 1 K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E 108489706 transcription initiation factor TFIID subunit 2 isoform X1 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 108453400 transcription initiation factor TFIID subunit 4b-like isoform X1 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 108479787 transcription initiation factor TFIID subunit 4b-like K03129 TAF4; transcription initiation factor TFIID subunit 4
E 108470843 transcription initiation factor TFIID subunit 5-like isoform X1 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 108453735 transcription initiation factor TFIID subunit 5-like K03130 TAF5; transcription initiation factor TFIID subunit 5
E 108467072 transcription initiation factor TFIID subunit 6 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 108450620 transcription initiation factor TFIID subunit 6-like K03131 TAF6; transcription initiation factor TFIID subunit 6
E 108468008 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 108470674 transcription initiation factor TFIID subunit 8-like K14649 TAF8; transcription initiation factor TFIID subunit 8
E 108489601 transcription initiation factor TFIID subunit 8 K14649 TAF8; transcription initiation factor TFIID subunit 8
E 108454401 transcription initiation factor TFIID subunit 8-like K14649 TAF8; transcription initiation factor TFIID subunit 8
E 108453541 transcription initiation factor TFIID subunit 8-like K14649 TAF8; transcription initiation factor TFIID subunit 8
E 108489246 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 108474218 transcription initiation factor TFIID subunit 10-like K03134 TAF10; transcription initiation factor TFIID subunit 10
E 108481027 transcription initiation factor TFIID subunit 10-like K03134 TAF10; transcription initiation factor TFIID subunit 10
E 108489572 transcription initiation factor TFIID subunit 11-like K03135 TAF11; transcription initiation factor TFIID subunit 11
E 108449974 transcription initiation factor TFIID subunit 11-like K03135 TAF11; transcription initiation factor TFIID subunit 11
E 108480211 transcription initiation factor TFIID subunit 12 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 108489763 transcription initiation factor TFIID subunit 12b-like K03126 TAF12; transcription initiation factor TFIID subunit 12
E 108460540 transcription initiation factor TFIID subunit 12b K03126 TAF12; transcription initiation factor TFIID subunit 12
E 108489498 transcription initiation factor TFIID subunit 13 K03127 TAF13; transcription initiation factor TFIID subunit 13
E 108485172 transcription initiation factor TFIID subunit 13-like K03127 TAF13; transcription initiation factor TFIID subunit 13
D TFIIE
E 108473849 transcription initiation factor IIE subunit alpha-like K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 108471286 transcription initiation factor IIE subunit alpha-like K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 108467438 general transcription factor IIE subunit 2-like K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
E 108454548 general transcription factor IIE subunit 2-like K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E 108486527 transcription initiation factor IIF subunit alpha K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E 108483437 transcription initiation factor IIF subunit beta-like K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
E 108489959 transcription initiation factor IIF subunit beta-like K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
E 108488540 general transcription factor IIF subunit 2 K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E 108475724 probable RNA polymerase II transcription factor B subunit 1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 108454522 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 108453827 RNA polymerase II transcription factor B subunit 4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 108487365 RNA polymerase II transcription factor B subunit 2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 108483432 DNA repair helicase XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 108467458 DNA repair helicase XPB1-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 108469451 DNA repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 108473677 DNA repair helicase XPD isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 108477341 RNA polymerase II transcription factor B subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 108456922 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 108457440 cyclin-dependent kinase D-3 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 108455426 cyclin-dependent kinase D-2-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 108465998 uncharacterized protein LOC108465998 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 108470584 cyclin-H1-1 isoform X1 K06634 CCNH; cyclin H
C Mediator complex
D Head
E 108467165 mediator of RNA polymerase II transcription subunit 6-like K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E 108487415 mediator of RNA polymerase II transcription subunit 6 K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E 108484084 mediator of RNA polymerase II transcription subunit 11 K15131 MED11; mediator of RNA polymerase II transcription subunit 11
E 108457289 mediator of RNA polymerase II transcription subunit 17-like isoform X1 K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E 108459414 mediator of RNA polymerase II transcription subunit 17 isoform X1 K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E 108467487 mediator of RNA polymerase II transcription subunit 18 K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E 108467250 mediator of RNA polymerase II transcription subunit 18-like K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E 108461559 mediator of RNA polymerase II transcription subunit 20a K13528 MED20; mediator of RNA polymerase II transcription subunit 20
E 108475968 mediator of RNA polymerase II transcription subunit 22b-like K15139 MED22; mediator of RNA polymerase II transcription subunit 22
E 108478250 mediator of RNA polymerase II transcription subunit 28 K15141 MED28; mediator of RNA polymerase II transcription subunit 28
D Middle
E 108473767 mediator of RNA polymerase II transcription subunit 7a isoform X1 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E 108477057 mediator of RNA polymerase II transcription subunit 10b-like isoform X1 K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E 108485558 mediator of RNA polymerase II transcription subunit 21 K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E 108459513 mediator of RNA polymerase II transcription subunit 31 K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E 108469658 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 14 K15156 MED14; mediator of RNA polymerase II transcription subunit 14
D CDK-module
E 108461403 cyclin-dependent kinase E-1-like K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 108457479 cyclin-dependent kinase E-1-like K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 108470407 cyclin-C1-2-like isoform X1 K15161 CCNC; cyclin-C
E 108487258 cyclin-C1-2-like K15161 CCNC; cyclin-C
E 108489248 cyclin-C1-2-like K15161 CCNC; cyclin-C
E 108469588 mediator of RNA polymerase II transcription subunit 13 isoform X1 K15164 MED13; mediator of RNA polymerase II transcription subunit 13
D Other mediators
E 108460350 mediator of RNA polymerase II transcription subunit 23 isoform X1 K15166 MED23; mediator of RNA polymerase II transcription subunit 23
E 108464562 mediator of RNA polymerase II transcription subunit 25-like isoform X1 K15168 MED25; mediator of RNA polymerase II transcription subunit 25
E 108465663 mediator of RNA polymerase II transcription subunit 25 isoform X1 K15168 MED25; mediator of RNA polymerase II transcription subunit 25
E 108461481 mediator of RNA polymerase II transcription subunit 27 K15170 MED27; mediator of RNA polymerase II transcription subunit 27
E 108459448 mediator of RNA polymerase II transcription subunit 32-like K27471 MED32; mediator of RNA polymerase II transcription subunit 32
E 108475463 mediator of RNA polymerase II transcription subunit 32-like K27471 MED32; mediator of RNA polymerase II transcription subunit 32
E 108478297 mediator of RNA polymerase II transcription subunit 32-like K27471 MED32; mediator of RNA polymerase II transcription subunit 32
E 108459928 mediator of RNA polymerase II transcription subunit 33B-like K27472 MED33; mediator of RNA polymerase II transcription subunit 33
E 108469904 mediator of RNA polymerase II transcription subunit 33B-like K27472 MED33; mediator of RNA polymerase II transcription subunit 33
E 108476214 mediator of RNA polymerase II transcription subunit 33A K27472 MED33; mediator of RNA polymerase II transcription subunit 33
E 108473349 mediator of RNA polymerase II transcription subunit 33B-like K27472 MED33; mediator of RNA polymerase II transcription subunit 33
C Coactivators
D SAGA/TFTC/STAGA complex
E 108471446 histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 108473312 transformation/transcription domain-associated protein-like K08874 TRRAP; transformation/transcription domain-associated protein
E 108489069 transformation/transcription domain-associated protein-like isoform X1 K08874 TRRAP; transformation/transcription domain-associated protein
E 108450136 transcriptional adapter ADA2a-like K11314 TADA2A; transcriptional adapter 2-alpha
E 108457493 transcriptional adapter ADA2b K11314 TADA2A; transcriptional adapter 2-alpha
E 108489706 transcription initiation factor TFIID subunit 2 isoform X1 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 108453400 transcription initiation factor TFIID subunit 4b-like isoform X1 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 108479787 transcription initiation factor TFIID subunit 4b-like K03129 TAF4; transcription initiation factor TFIID subunit 4
E 108470843 transcription initiation factor TFIID subunit 5-like isoform X1 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 108453735 transcription initiation factor TFIID subunit 5-like K03130 TAF5; transcription initiation factor TFIID subunit 5
E 108467072 transcription initiation factor TFIID subunit 6 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 108450620 transcription initiation factor TFIID subunit 6-like K03131 TAF6; transcription initiation factor TFIID subunit 6
E 108468008 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 108489246 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 108474218 transcription initiation factor TFIID subunit 10-like K03134 TAF10; transcription initiation factor TFIID subunit 10
E 108481027 transcription initiation factor TFIID subunit 10-like K03134 TAF10; transcription initiation factor TFIID subunit 10
E 108480211 transcription initiation factor TFIID subunit 12 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 108489763 transcription initiation factor TFIID subunit 12b-like K03126 TAF12; transcription initiation factor TFIID subunit 12
E 108460540 transcription initiation factor TFIID subunit 12b K03126 TAF12; transcription initiation factor TFIID subunit 12
E 108485403 ataxin-7-like protein 3 K11363 SGF11; SAGA-associated factor 11
E 108481519 uncharacterized protein LOC108481519 K11364 SGF29; SAGA-associated factor 29
E 108472508 uncharacterized protein LOC108472508 K11364 SGF29; SAGA-associated factor 29
E 108460158 uncharacterized protein LOC108460158 K11364 SGF29; SAGA-associated factor 29
E 108456654 protein CHROMATIN REMODELING 5-like isoform X1 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E 108453049 protein CHROMATIN REMODELING 5 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E 108489899 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 108452744 transcription and mRNA export factor SUS1-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 108465362 transcription and mRNA export factor SUS1-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 108469796 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 108463728 ubiquitin carboxyl-terminal hydrolase 22-like K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 108452125 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 108464113 ubiquitin carboxyl-terminal hydrolase 22-like K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 108483144 splicing factor 3B subunit 3-like K12830 SF3B3; splicing factor 3B subunit 3
E 108456740 pre-mRNA-splicing factor RSE1 isoform X1 K12830 SF3B3; splicing factor 3B subunit 3
E 108460535 splicing factor 3B subunit 3-like K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E 108473363 ATP-dependent helicase BRM-like K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 108479165 ATP-dependent helicase BRM-like isoform X1 K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 108466887 chromatin structure-remodeling complex protein BSH-like K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 108454095 chromatin structure-remodeling complex protein BSH-like isoform X1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 108476289 SWI/SNF complex subunit SWI3D-like K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 108479272 SWI/SNF complex subunit SWI3A isoform X1 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 108457191 SWI/SNF complex subunit SWI3C K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 108450274 SWI/SNF complex subunit SWI3B K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 108460638 SWI/SNF complex subunit SWI3D-like K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 108453543 SWI/SNF complex subunit SWI3C-like isoform X1 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 108476711 SWI/SNF complex component SNF12 homolog K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 108457410 SWI/SNF complex component SNF12 homolog K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 108454421 SWI/SNF complex component SNF12 homolog K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 108452404 SWI/SNF complex component SNF12 homolog K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 108453505 actin-related protein 4 K11340 ACTL6A; actin-like protein 6A
D SWI/SNF complex
E 108466887 chromatin structure-remodeling complex protein BSH-like K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 108454095 chromatin structure-remodeling complex protein BSH-like isoform X1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
D Others
E 108454640 RNA polymerase II transcriptional coactivator KIWI-like K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
E 108483634 RNA polymerase II transcriptional coactivator KELP isoform X1 K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
E 108473958 RNA polymerase II transcriptional coactivator KIWI-like K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
E 108482947 cell division cycle and apoptosis regulator protein 1 K25827 CCAR1; cell division cycle and apoptosis regulator protein 1
C Other transcription-related factors
D Transcription elongation factors
E 108459198 transcription elongation factor TFIIS-like K03145 TFIIS; transcription elongation factor S-II
E 108457171 transcription elongation factor TFIIS-like K03145 TFIIS; transcription elongation factor S-II
E 108458404 transcription elongation factor SPT4 homolog 2 K15171 SUPT4H1; transcription elongation factor SPT4
E 108463424 transcription elongation factor SPT4 homolog 1-like K15171 SUPT4H1; transcription elongation factor SPT4
E 108483533 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
E 108476334 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
E 108453330 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
E 108450561 transcription elongation factor SPT6-like K11292 SUPT6H; transcription elongation factor SPT6
E 108486186 transcription elongation factor SPT6-like K11292 SUPT6H; transcription elongation factor SPT6
E 108458866 transcription elongation factor SPT6-like K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E 108486438 polyadenylation and cleavage factor homolog 4 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 108460635 polyadenylation and cleavage factor homolog 4-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 108453523 polyadenylation and cleavage factor homolog 4-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 108453267 polyadenylation and cleavage factor homolog 4-like isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 108489278 cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 108464316 cleavage and polyadenylation specificity factor subunit 3-I K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 108479519 30-kDa cleavage and polyadenylation specificity factor 30 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 108486484 homeobox protein 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 108473075 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108480369 serine/threonine-protein phosphatase PP1 isozyme 2 isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108472626 serine/threonine-protein phosphatase PP1 isozyme 9-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108469813 serine/threonine-protein phosphatase PP1 isozyme 9 isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108486997 serine/threonine-protein phosphatase PP1 isozyme 2 isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108474824 serine/threonine-protein phosphatase PP1 isozyme 2-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108457248 serine/threonine-protein phosphatase PP1 isozyme 3-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108459241 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108464289 serine/threonine-protein phosphatase PP1 isozyme 4 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108464968 serine/threonine-protein phosphatase PP1 isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108464433 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108467197 uncharacterized protein LOC108467197 isoform X1 K06100 SYMPK; symplekin
E 108452984 uncharacterized protein LOC108452984 isoform X1 K06100 SYMPK; symplekin
E 108450475 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 108453346 5'-3' exoribonuclease 3-like isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 108469569 decapping nuclease DXO homolog, chloroplastic K14845 RAI1; RAT1-interacting protein
E 108457407 regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1 K15559 RTT103; regulator of Ty1 transposition protein 103
E 108473419 actin cytoskeleton-regulatory complex protein PAN1-like K15559 RTT103; regulator of Ty1 transposition protein 103
E 108457662 regulation of nuclear pre-mRNA domain-containing protein 1B-like K15559 RTT103; regulator of Ty1 transposition protein 103
E 108465227 regulation of nuclear pre-mRNA domain-containing protein 2 K15559 RTT103; regulator of Ty1 transposition protein 103
E 108479929 peptidyl-prolyl cis-trans isomerase Pin1-like K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
E 108487215 peptidyl-prolyl cis-trans isomerase Pin1-like K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E 108467002 protein PAF1 homolog K15174 PAF1; RNA polymerase II-associated factor 1
E 108457111 protein PAF1 homolog K15174 PAF1; RNA polymerase II-associated factor 1
E 108486132 protein PAF1 homolog K15174 PAF1; RNA polymerase II-associated factor 1
E 108476197 protein CDC73 homolog K15175 CDC73; parafibromin
E 108453428 protein CTR9 homolog K15176 CTR9; RNA polymerase-associated protein CTR9
E 108479644 protein LEO1 homolog K15177 LEO1; RNA polymerase-associated protein LEO1
E 108489485 protein RTF1 homolog K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
D Super elongation complex (SEC)
E 108459113 protein rtoA K15186 EAF; ELL-associated factor
E 108453460 ELL-associated factor 1-like K15186 EAF; ELL-associated factor
E 108483062 cyclin-T1-4-like K15188 CCNT; cyclin T
E 108456979 cyclin-T1-5-like isoform X1 K15188 CCNT; cyclin T
E 108489367 cyclin-T1-4 K15188 CCNT; cyclin T
E 108454493 cyclin-T1-3-like K15188 CCNT; cyclin T
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
E 108483062 cyclin-T1-4-like K15188 CCNT; cyclin T
E 108456979 cyclin-T1-5-like isoform X1 K15188 CCNT; cyclin T
E 108489367 cyclin-T1-4 K15188 CCNT; cyclin T
E 108454493 cyclin-T1-3-like K15188 CCNT; cyclin T
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
E 108467686 probable RNA methyltransferase At5g51130 K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E 108474926 la-related protein 6C K15191 LARP7; La-related protein 7
E 108467095 la-related protein 6B isoform X1 K15191 LARP7; La-related protein 7
E 108481314 la-related protein 6C-like K15191 LARP7; La-related protein 7
E 108487328 la-related protein 6A-like K15191 LARP7; La-related protein 7
E 108463550 la-related protein 6C-like K15191 LARP7; La-related protein 7
E 108460964 la-related protein 6A-like K15191 LARP7; La-related protein 7
E 108483062 cyclin-T1-4-like K15188 CCNT; cyclin T
E 108456979 cyclin-T1-5-like isoform X1 K15188 CCNT; cyclin T
E 108489367 cyclin-T1-4 K15188 CCNT; cyclin T
E 108454493 cyclin-T1-3-like K15188 CCNT; cyclin T
D DBIRD complex
D Others
E 108463790 TATA-binding protein-associated factor BTAF1 K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E 108467208 protein Dr1 homolog isoform X1 K21751 DR1; down-regulator of transcription 1
E 108454433 protein Dr1 homolog K21751 DR1; down-regulator of transcription 1
E 108483903 dr1-associated corepressor homolog K21752 DRAP1; Dr1-associated corepressor
E 108450716 dr1-associated corepressor-like K21752 DRAP1; Dr1-associated corepressor
E 108460861 dr1-associated corepressor homolog isoform X1 K21752 DRAP1; Dr1-associated corepressor
E 108467233 protein SPT2 homolog K15193 SPTY2D1; protein SPT2
E 108467185 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1 K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
E 108483565 RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1 K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
E 108489432 RNA polymerase II C-terminal domain phosphatase-like 1 K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
E 108475083 RNA polymerase II C-terminal domain phosphatase-like 4 K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
E 108474543 RNA polymerase II C-terminal domain phosphatase-like 4 K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
E 108460653 RNA polymerase II C-terminal domain phosphatase-like 3 K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
E 108487113 CTD small phosphatase-like protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108484878 CTD small phosphatase-like protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108488267 CTD small phosphatase-like protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108488268 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108485560 probable C-terminal domain small phosphatase K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108462265 probable phosphatase PSR2 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108461749 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108461759 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108455466 probable C-terminal domain small phosphatase K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 108479186 protein IWS1 homolog K17498 SPN1; transcription factor SPN1
E 108481715 protein IWS1 homolog K17498 SPN1; transcription factor SPN1
E 108481718 protein IWS1 homolog K17498 SPN1; transcription factor SPN1
E 108481722 protein IWS1 homolog K17498 SPN1; transcription factor SPN1
E 108453360 transcription factor IWS1-like K17498 SPN1; transcription factor SPN1
E 108467111 transcriptional elongation regulator MINIYO K20826 RPAP1; RNA polymerase II-associated protein 1
E 108457058 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E 108470705 RNA polymerase II-associated protein 3 isoform X1 K23002 RPAP3; RNA polymerase II-associated protein 3
E 108451470 serum response factor-like K12412 MCM1; pheromone receptor transcription factor
E 108455556 agamous-like MADS-box protein AGL62 K12412 MCM1; pheromone receptor transcription factor
E 108471183 GPN-loop GTPase 3 isoform X1 K24104 GPN; GPN-loop GTPase
E 108467705 GPN-loop GTPase 3-like K24104 GPN; GPN-loop GTPase
E 108484250 GPN-loop GTPase 2 K24104 GPN; GPN-loop GTPase
E 108465653 GPN-loop GTPase 1 isoform X1 K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E 108463964 DNA-directed RNA polymerase III subunit 1 K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E 108460354 DNA-directed RNA polymerase III subunit 2 K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E 108480727 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 108482920 DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E 108457347 DNA-directed RNA polymerase III subunit RPC3 isoform X1 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E 108481984 DNA-directed RNA polymerase III subunit RPC4 isoform X1 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 108485997 uncharacterized protein LOC108485997 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 108463242 uncharacterized protein LOC108463242 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 108479910 DNA-directed RNA polymerase III subunit RPC5 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E 108475922 DNA-directed RNA polymerase III subunit RPC6 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E 108450702 nucleolar transcription factor 1 K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E 108467057 DNA-directed RNA polymerase III subunit RPC8 K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E 108474756 DNA-directed RNA polymerase III subunit RPC9-like K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E 108469327 DNA-directed RNA polymerase III subunit RPC10-like K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
E 108478430 DNA-directed RNA polymerase III subunit RPC10-like K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E 108480204 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108467808 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108459811 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108456719 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108458156 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 108454636 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 108461382 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 108449972 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 108458370 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 108456277 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 108476113 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E 108476866 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E 108450017 transcription factor IIIA-like isoform X1 K09191 GTF3A; general transcription factor IIIA
E 108450194 transcription factor IIIA isoform X1 K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E 108467550 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108472401 TATA-box-binding protein isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108461768 TATA-box-binding protein-like isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108474178 plant-specific TFIIB-related protein PTF2 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E 108473544 transcription factor IIIB 90 kDa subunit-like isoform X1 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E 108464462 transcription factor IIIB 90 kDa subunit-like isoform X1 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E 108457496 transcription factor TFIIIB component B'' homolog K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E 108460307 uncharacterized protein LOC108460307 K15199 GTF3C1; general transcription factor 3C polypeptide 1
E 108456978 uncharacterized protein LOC108456978 isoform X1 K15200 GTF3C2; general transcription factor 3C polypeptide 2
E 108473361 general transcription factor 3C polypeptide 3 isoform X1 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E 108464243 general transcription factor 3C polypeptide 5-like K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 108472543 general transcription factor 3C polypeptide 6 K15203 GTF3C6; general transcription factor 3C polypeptide 6
D TFIIIC, fungi type
E 108464243 general transcription factor 3C polypeptide 5-like K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 108473361 general transcription factor 3C polypeptide 3 isoform X1 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E 108450534 uncharacterized protein LOC108450534 K15208 SNAPC1; snRNA-activating protein complex subunit 1
E 108489897 snRNA-activating protein complex subunit isoform X1 K15210 SNAPC3; snRNA-activating protein complex subunit 3
D Octamer transcription factors
D Others
E 108471008 repressor of RNA polymerase III transcription MAF1 homolog K25817 MAF1; repressor of RNA polymerase III transcription MAF1
E 108477412 repressor of RNA polymerase III transcription MAF1 homolog K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E 108466193 DNA-directed RNA polymerase I subunit 1 K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E 108456748 DNA-directed RNA polymerase I subunit 2 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E 108480727 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 108482920 DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E 108483611 DNA-directed RNA polymerase I subunit rpa49 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E 108459338 DNA-directed RNA polymerase I subunit RPA12 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E 108480204 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108467808 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108459811 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108456719 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 108458156 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 108454636 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 108461382 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 108449972 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 108458370 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 108456277 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 108476113 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E 108476866 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E 108467550 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108472401 TATA-box-binding protein isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 108461768 TATA-box-binding protein-like isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
E 108460035 high mobility group B protein 6-like K09273 UBTF; upstream-binding transcription factor
D Transcription initiation factors
E 108486280 RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
E 108476435 histone acetyltransferase KAT6B isoform X1 K15223 UAF30; upstream activation factor subunit UAF30
E 108457915 protein TRI1-like isoform X1 K15223 UAF30; upstream activation factor subunit UAF30
D Transcription elongation factors
E 108458404 transcription elongation factor SPT4 homolog 2 K15171 SUPT4H1; transcription elongation factor SPT4
E 108463424 transcription elongation factor SPT4 homolog 1-like K15171 SUPT4H1; transcription elongation factor SPT4
E 108483533 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
E 108476334 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
E 108453330 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E 108476218 ISWI chromatin-remodeling complex ATPase CHR11-like K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
E 108456722 ISWI chromatin-remodeling complex ATPase CHR11-like isoform X1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
E 108450009 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E 108468793 DNA-directed RNA polymerase subunit alpha-like K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E 11540333 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E 11540285 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E 11540280 rpoC2; RNA polymerase beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E 11540283 rpoC1; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Sigma factors
E 108484413 RNA polymerase sigma factor sigA-like K03086 rpoD; RNA polymerase primary sigma factor
E 108473463 RNA polymerase sigma factor sigA-like isoform X1 K03086 rpoD; RNA polymerase primary sigma factor
E 108484224 RNA polymerase sigma factor sigC-like K03093 sigI; RNA polymerase sigma-I factor
E 108478186 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial K03093 sigI; RNA polymerase sigma-I factor
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E 108474177 plant-specific TFIIB-related protein 1 isoform X1 K03124 TFIIB; transcription initiation factor TFIIB
E 108483551 transcription initiation factor IIB-2-like K03124 TFIIB; transcription initiation factor TFIIB
E 108459107 transcription initiation factor IIB-like K03124 TFIIB; transcription initiation factor TFIIB
E 108453985 transcription initiation factor IIB-2 K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E 108473849 transcription initiation factor IIE subunit alpha-like K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 108471286 transcription initiation factor IIE subunit alpha-like K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024