+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Geobacter anodireducens

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D A2G06_06180 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C A2G06_06190 GTPase Era K03595 era; GTPase C A2G06_15140 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C A2G06_15105 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor C A2G06_01220 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor C A2G06_08580 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C A2G06_13510 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D A2G06_07535 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D A2G06_00400 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D A2G06_10615 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D A2G06_02065 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A2G06_16360 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A2G06_14475 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D A2G06_03390 rRNA (cytidine-2'-O-)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D A2G06_09890 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D A2G06_09690 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A2G06_15115 ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D A2G06_14805 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D A2G06_14515 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D A2G06_11240 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D A2G06_09890 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D A2G06_09740 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D A2G06_08205 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D A2G06_09990 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A2G06_03505 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D A2G06_16030 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C A2G06_08165 ribosomal-protein-alanine N-acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C A2G06_03350 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM C A2G06_15100 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C A2G06_02070 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C A2G06_06180 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C A2G06_12065 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C A2G06_15160 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] B rRNA helicases C A2G06_00710 ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] B GTPases C A2G06_06190 GTPase Era K03595 era; GTPase C A2G06_06195 ribosome biogenesis GTPase Der K03977 engA; GTPase C A2G06_15140 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] C A2G06_11710 GTPase HflX K03665 hflX; GTPase B Other maturation factors C A2G06_06140 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C A2G06_09055 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C A2G06_09075 ribosome maturation factor K09748 rimP; ribosome maturation factor RimP C A2G06_02155 RNA-binding protein K14761 rlbA; ribosome-associated protein C A2G06_15120 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein C A2G06_05925 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor C A2G06_10570 RNA-binding protein K07574 yhbY; RNA-binding protein C A2G06_07425 pseudouridine synthase K05808 hpf; ribosome hibernation promoting factor # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024