+D GENES KO
#
KEGG Orthology (KO) - Gilliamella apicola
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:gap00010]
D GAPWK_0931 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GAPWK_2480 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GAPWK_1998 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_2450 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_1816 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GAPWK_0824 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_1222 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_2451 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GAPWK_1794 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GAPWK_1021 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GAPWK_1454 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GAPWK_0946 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GAPWK_0947 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_1810 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GAPWK_1933 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GAPWK_0384 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GAPWK_0360 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GAPWK_1972 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D GAPWK_2220 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GAPWK_2215 Glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D GAPWK_1832 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GAPWK_0483 Aldose 1-epimerase family protein YeaD K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D GAPWK_2179 Beta-glucosidase; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_1842 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_2640 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_0745 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_1732 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_2479 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:gap00020]
D GAPWK_2408 Citrate synthase (si) K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D GAPWK_2410 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GAPWK_2409 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_2090 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GAPWK_2091 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GAPWK_2363 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D GAPWK_2364 Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein) K00247 frdD; succinate dehydrogenase subunit D
D GAPWK_0946 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GAPWK_0947 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GAPWK_1810 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:gap00030]
D GAPWK_2480 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GAPWK_0485 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GAPWK_0486 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D GAPWK_0264 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GAPWK_2121 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GAPWK_2236 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GAPWK_1671 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GAPWK_1672 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GAPWK_0319 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GAPWK_2230 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GAPWK_2238 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D GAPWK_0958 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D GAPWK_2796 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D GAPWK_1903 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D GAPWK_0290 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D GAPWK_2309 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D GAPWK_1877 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D GAPWK_1832 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GAPWK_2212 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GAPWK_2057 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GAPWK_0179 Gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D GAPWK_1289 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D GAPWK_1998 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_2450 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:gap00040]
D GAPWK_0006 Pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D GAPWK_0007 Exopolygalacturonate lyase K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D GAPWK_0009 Oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D GAPWK_0011 Pectin degradation protein KdgF K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D GAPWK_0302 Polygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D GAPWK_2205 Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D GAPWK_2260 Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D GAPWK_2254 Altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D GAPWK_2259 Altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D GAPWK_2256 Altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D GAPWK_2258 Altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D GAPWK_2208 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D GAPWK_0540 Starvation sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D GAPWK_0543 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D GAPWK_2206 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D GAPWK_0541 Starvation sensing protein RspB K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D GAPWK_2465 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GAPWK_2401 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D GAPWK_2400 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D GAPWK_2402 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GAPWK_2012 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GAPWK_0379 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GAPWK_2121 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GAPWK_2236 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GAPWK_2010 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D GAPWK_2009 Ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D GAPWK_2563 Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D GAPWK_2562 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GAPWK_0807 Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D GAPWK_2662 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D GAPWK_0519 hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D GAPWK_2483 hypothetical protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
C 00051 Fructose and mannose metabolism [PATH:gap00051]
D GAPWK_1432 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_2715 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_2790 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_0961 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GAPWK_0808 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D GAPWK_0807 Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D GAPWK_2662 Rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GAPWK_0592 Mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D GAPWK_0315 Sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D GAPWK_0304 L-sorbose 1-phosphate reductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D GAPWK_0438 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D GAPWK_0519 hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D GAPWK_2562 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GAPWK_1998 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_2450 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_1816 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GAPWK_2230 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GAPWK_0291 Ribulose-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D GAPWK_1588 PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GAPWK_2719 hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GAPWK_2718 PTS system, fructose-specific IIBC component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GAPWK_1587 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIC component / PTS system, mannose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_0439 PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_2717 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_0477 PTS system, tagatose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_0957 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_2742 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_1302 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_0420 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GAPWK_0955 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0419 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_1300 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0418 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_1299 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_0593 PTS system, mannitol-specific IIB component / PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D GAPWK_0187 Putative phosphatase YfbT K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D GAPWK_0314 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GAPWK_1665 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GAPWK_0313 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D GAPWK_1666 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D GAPWK_0312 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D GAPWK_1667 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D GAPWK_0308 PTS system, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D GAPWK_0307 PTS system, sorbose-specific IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D GAPWK_0306 PTS system, sorbose-specific IIC component K02814 sorA; sorbose PTS system EIIC component
D GAPWK_0305 PTS system, sorbose-specific IID component K02815 sorM; sorbose PTS system EIID component
C 00052 Galactose metabolism [PATH:gap00052]
D GAPWK_2220 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GAPWK_2219 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GAPWK_2218 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GAPWK_2217 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GAPWK_2465 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GAPWK_1832 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GAPWK_0931 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GAPWK_2031 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D GAPWK_2028 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D GAPWK_0515 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_2233 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0180 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_2663 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0375 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0516 Putative carbohydrate PTS system, IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2232 PTS system, galactitol-specific IIB component, putative K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2234 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0181 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2661 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0376 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0182 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2660 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0377 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0517 Putative carbohydrate PTS system, IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2231 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2235 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0183 Galactitol-1-phosphate 5-dehydrogenase K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251]
D GAPWK_0481 Fructokinase K21621 fk; tagatose kinase [EC:2.7.1.101]
D GAPWK_0185 Tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GAPWK_0358 Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D GAPWK_0479 Tagatose 1,6-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D GAPWK_0186 Tagatose 1,6-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D GAPWK_2276 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GAPWK_2788 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GAPWK_2204 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:gap00053]
D GAPWK_2403 Ascorbate-specific PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GAPWK_0366 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GAPWK_2001 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_2404 Ascorbate-specific PTS system, EIIC component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_0365 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_0301 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_2000 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_0364 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_2406 putative L-ascorbate-6-phosphate lactonase UlaG (L-ascorbate utilization protein G) K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D GAPWK_2401 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D GAPWK_2400 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D GAPWK_2402 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GAPWK_2012 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GAPWK_0379 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GAPWK_0393 Glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D GAPWK_0394 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D GAPWK_0390 D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:gap00500]
D GAPWK_2276 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GAPWK_2788 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GAPWK_2204 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D GAPWK_2465 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GAPWK_1977 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GAPWK_0696 Beta-hexosaminidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GAPWK_0748 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GAPWK_0746 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GAPWK_0750 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D GAPWK_2179 Beta-glucosidase; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_1842 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_2640 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_0745 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_1732 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GAPWK_2479 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GAPWK_1508 PTS system, maltose and glucose-specific IIC component / PTS system, maltose and glucose-specific IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GAPWK_2619 PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D GAPWK_2620 Trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D GAPWK_1832 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GAPWK_0931 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GAPWK_2480 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GAPWK_1432 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_2715 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_2790 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:gap00520]
D GAPWK_0760 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GAPWK_0967 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D GAPWK_2479 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GAPWK_2748 PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D GAPWK_2746 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D GAPWK_2747 Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D GAPWK_1432 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_2715 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_2790 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GAPWK_0595 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GAPWK_0101 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GAPWK_0596 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GAPWK_0422 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D GAPWK_0013 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D GAPWK_0271 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GAPWK_1876 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GAPWK_2564 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D GAPWK_0931 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GAPWK_1832 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GAPWK_2465 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GAPWK_2219 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GAPWK_2218 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GAPWK_2217 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GAPWK_0957 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_2742 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_1302 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_0420 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GAPWK_0955 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0419 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_1300 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0418 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_1299 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_2480 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GAPWK_0961 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:gap00620]
D GAPWK_1810 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GAPWK_0946 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GAPWK_0947 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_0527 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D GAPWK_0384 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GAPWK_0360 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GAPWK_1972 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D GAPWK_1615 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GAPWK_1614 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GAPWK_1454 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GAPWK_2431 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GAPWK_2055 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GAPWK_2056 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GAPWK_2347 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GAPWK_0731 Urea carboxylase without Allophanate hydrolase 2 domains K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D GAPWK_0545 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GAPWK_1784 Glycolate dehydrogenase, subunit GlcD K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D GAPWK_1933 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GAPWK_0176 Pyruvate oxidase [ubiquinone, cytochrome] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D GAPWK_0690 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D GAPWK_0820 D-Lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D GAPWK_1829 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GAPWK_0288 putative glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GAPWK_1464 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GAPWK_0088 putative metal-binding enzyme, YcbL K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GAPWK_0507 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GAPWK_2363 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D GAPWK_2364 Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein) K00247 frdD; succinate dehydrogenase subunit D
D GAPWK_2387 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GAPWK_0555 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:gap00630]
D GAPWK_2408 Citrate synthase (si) K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D GAPWK_2410 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GAPWK_0731 Urea carboxylase without Allophanate hydrolase 2 domains K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D GAPWK_2122 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GAPWK_0429 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GAPWK_2111 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_0395 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D GAPWK_0396 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GAPWK_0810 Lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D GAPWK_2057 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GAPWK_2522 Formate dehydrogenase O alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GAPWK_2524 Formate dehydrogenase N gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:gap00640]
D GAPWK_1615 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GAPWK_1614 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_0527 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D GAPWK_0739 Alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D GAPWK_2431 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GAPWK_2055 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GAPWK_2056 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GAPWK_2347 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GAPWK_0731 Urea carboxylase without Allophanate hydrolase 2 domains K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D GAPWK_0237 Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GAPWK_2091 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GAPWK_2090 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GAPWK_2408 Citrate synthase (si) K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D GAPWK_1933 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GAPWK_2153 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D GAPWK_1545 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D GAPWK_0810 Lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:gap00650]
D GAPWK_0384 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GAPWK_2363 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D GAPWK_2364 Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein) K00247 frdD; succinate dehydrogenase subunit D
D GAPWK_0237 Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GAPWK_0527 Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D GAPWK_1810 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GAPWK_0910 hypothetical protein K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D GAPWK_1013 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1926 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1014 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GAPWK_1927 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:gap00660]
D GAPWK_1013 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1926 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1014 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GAPWK_1927 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D GAPWK_2091 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GAPWK_2090 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GAPWK_0553 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GAPWK_0552 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GAPWK_0554 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:gap00562]
D GAPWK_0113 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GAPWK_1816 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:gap00190]
D GAPWK_2386 NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D GAPWK_2385 NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D GAPWK_2384 NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D GAPWK_2383 NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D GAPWK_2382 NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D GAPWK_2757 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D GAPWK_2363 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D GAPWK_2364 Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein) K00247 frdD; succinate dehydrogenase subunit D
D GAPWK_2089 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GAPWK_2088 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GAPWK_0096 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GAPWK_0094 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GAPWK_0095 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GAPWK_0097 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GAPWK_0093 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GAPWK_0100 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GAPWK_0098 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GAPWK_0099 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GAPWK_0826 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D GAPWK_1455 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:gap00710]
D GAPWK_2451 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GAPWK_0824 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_1222 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_1998 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_2450 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_1671 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GAPWK_0319 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GAPWK_2230 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GAPWK_1816 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GAPWK_2121 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GAPWK_2236 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GAPWK_1672 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GAPWK_2387 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:gap00720]
D GAPWK_1810 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GAPWK_2387 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GAPWK_2363 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D GAPWK_2364 Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein) K00247 frdD; succinate dehydrogenase subunit D
D GAPWK_2090 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GAPWK_2091 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GAPWK_2409 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GAPWK_2410 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GAPWK_2431 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GAPWK_2055 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GAPWK_2056 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GAPWK_2347 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GAPWK_0600 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GAPWK_0781 Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GAPWK_2773 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GAPWK_1614 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GAPWK_1615 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:gap00680]
D GAPWK_2522 Formate dehydrogenase O alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GAPWK_2524 Formate dehydrogenase N gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D GAPWK_2111 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GAPWK_1021 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GAPWK_2387 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GAPWK_1998 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_2450 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GAPWK_2238 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D GAPWK_1615 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GAPWK_1614 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GAPWK_1794 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GAPWK_2659 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_0318 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_1372 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GAPWK_2508 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:gap00910]
D GAPWK_0192 Nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D GAPWK_0193 Nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D GAPWK_0429 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GAPWK_0403 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GAPWK_0402 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GAPWK_1754 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D GAPWK_0267 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D GAPWK_0442 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:gap00920]
D GAPWK_2655 Sulfate and thiosulfate binding protein CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D GAPWK_2654 Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D GAPWK_2653 Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D GAPWK_2652 Sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D GAPWK_2647 Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GAPWK_2648 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D GAPWK_2649 Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D GAPWK_2650 Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D GAPWK_2783 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GAPWK_1620 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GAPWK_2486 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D GAPWK_2197 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GAPWK_2553 Anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GAPWK_2552 Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D GAPWK_2551 Anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:gap00061]
D GAPWK_2431 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GAPWK_2055 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GAPWK_2056 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GAPWK_2347 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GAPWK_0731 Urea carboxylase without Allophanate hydrolase 2 domains K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D GAPWK_2434 Acyl carrier protein K02078 acpP; acyl carrier protein
D GAPWK_2436 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GAPWK_2437 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GAPWK_1745 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GAPWK_2433 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GAPWK_2237 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_2435 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_0941 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D GAPWK_2752 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GAPWK_0171 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:gap00071]
D GAPWK_0424 2-acylglycerophosphoethanolamine acyltransferase / Acyl-[acyl-carrier-protein] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D GAPWK_0384 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GAPWK_0360 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:gap00074]
D GAPWK_0731 Urea carboxylase without Allophanate hydrolase 2 domains K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D GAPWK_2434 Acyl carrier protein K02078 acpP; acyl carrier protein
D GAPWK_2436 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:gap00561]
D GAPWK_0396 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GAPWK_1972 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D GAPWK_1544 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, dihydroxyacetone binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D GAPWK_0381 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, dihydroxyacetone binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D GAPWK_1543 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D GAPWK_0380 Putative dihydroxyacetone kinase, ADP-binding subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D GAPWK_1542 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase; DHA-specific IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GAPWK_1545 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D GAPWK_2521 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D GAPWK_2438 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GAPWK_1291 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GAPWK_1046 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GAPWK_2430 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GAPWK_2028 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:gap00564]
D GAPWK_0426 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GAPWK_2521 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D GAPWK_1291 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GAPWK_1046 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GAPWK_2430 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GAPWK_0424 2-acylglycerophosphoethanolamine acyltransferase / Acyl-[acyl-carrier-protein] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D GAPWK_2337 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GAPWK_1591 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GAPWK_1025 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GAPWK_0806 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D GAPWK_1414 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GAPWK_2767 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D GAPWK_1917 hypothetical protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D GAPWK_2096 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:gap00600]
D GAPWK_2031 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D GAPWK_2028 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D GAPWK_0967 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D GAPWK_2095 Acyl-CoA thioesterase YciA, involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:gap00230]
D GAPWK_2098 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GAPWK_1877 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D GAPWK_1832 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GAPWK_2212 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GAPWK_2343 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GAPWK_2006 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GAPWK_0025 Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D GAPWK_0249 Phosphoribosylformylglycinamidine synthase, synthetase subunit / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D GAPWK_1808 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D GAPWK_0792 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D GAPWK_0791 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D GAPWK_1683 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GAPWK_1821 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GAPWK_2494 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GAPWK_2007 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GAPWK_1530 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GAPWK_1325 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D GAPWK_1884 UDP-sugar hydrolase; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D GAPWK_1871 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GAPWK_0802 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GAPWK_1016 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GAPWK_1878 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GAPWK_0170 Cytoplasmic protein YaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D GAPWK_0898 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GAPWK_2308 Inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D GAPWK_1051 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GAPWK_1834 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GAPWK_0857 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GAPWK_0331 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GAPWK_1366 Xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D GAPWK_0077 Glutamine amidotransferase, class I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GAPWK_1612 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GAPWK_1828 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GAPWK_2267 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GAPWK_2268 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GAPWK_0265 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GAPWK_0793 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D GAPWK_0503 Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D GAPWK_0832 GTP pyrophosphokinase, (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GAPWK_1456 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D GAPWK_2224 GTP pyrophosphokinase, (p)ppGpp synthetase I K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D GAPWK_2020 Adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D GAPWK_0024 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GAPWK_1880 Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D GAPWK_2506 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D GAPWK_1881 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D GAPWK_0214 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GAPWK_0398 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GAPWK_2097 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D GAPWK_2319 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D GAPWK_2647 Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GAPWK_2615 Allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D GAPWK_1751 Allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D GAPWK_1746 Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D GAPWK_1753 Ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D GAPWK_1756 Ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D GAPWK_2629 Gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D GAPWK_1754 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:gap00240]
D GAPWK_2770 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GAPWK_2769 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GAPWK_1459 Dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D GAPWK_1725 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GAPWK_2350 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GAPWK_2798 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GAPWK_0857 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GAPWK_0398 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GAPWK_1020 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GAPWK_0920 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GAPWK_1325 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D GAPWK_1884 UDP-sugar hydrolase; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D GAPWK_1871 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GAPWK_2308 Inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D GAPWK_0170 Cytoplasmic protein YaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D GAPWK_0071 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GAPWK_1881 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D GAPWK_0137 Pseudouridine kinase K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D GAPWK_0138 Pseudouridine 5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D GAPWK_1883 Pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D GAPWK_2506 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D GAPWK_1882 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D GAPWK_0265 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GAPWK_2080 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D GAPWK_2267 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GAPWK_2268 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GAPWK_0503 Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D GAPWK_2355 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GAPWK_2780 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GAPWK_1793 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D GAPWK_0280 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GAPWK_1093 dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D GAPWK_1511 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D GAPWK_0466 putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:gap00250]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_1773 Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D GAPWK_0060 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GAPWK_0604 L-aspartate-beta-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D GAPWK_0372 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GAPWK_1370 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GAPWK_1371 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GAPWK_0024 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GAPWK_1821 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GAPWK_2494 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GAPWK_0237 Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GAPWK_0403 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GAPWK_0402 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GAPWK_0429 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GAPWK_2770 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GAPWK_2769 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GAPWK_0595 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GAPWK_2343 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:gap00260]
D GAPWK_2063 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GAPWK_0468 Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D GAPWK_2744 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GAPWK_0469 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D GAPWK_0470 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GAPWK_0041 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D GAPWK_2111 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GAPWK_0396 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GAPWK_1794 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GAPWK_2659 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_0318 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_1372 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GAPWK_2508 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D GAPWK_0466 putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_1025 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GAPWK_0340 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GAPWK_1930 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GAPWK_0797 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D GAPWK_0034 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GAPWK_1963 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GAPWK_1964 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:gap00270]
D GAPWK_2783 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GAPWK_1620 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GAPWK_0117 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GAPWK_1557 Homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D GAPWK_2774 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GAPWK_2426 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GAPWK_1476 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D GAPWK_0898 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GAPWK_0243 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase related protein K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D GAPWK_2468 Biosynthetic Aromatic amino acid aminotransferase alpha K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GAPWK_2630 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2646 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_1914 S-ribosylhomocysteine lyase / Autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D GAPWK_2063 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GAPWK_0468 Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D GAPWK_2744 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GAPWK_0469 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D GAPWK_2486 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D GAPWK_2197 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GAPWK_0215 O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GAPWK_1928 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GAPWK_1467 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GAPWK_1804 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_1933 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GAPWK_0604 L-aspartate-beta-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D GAPWK_0034 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GAPWK_0340 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GAPWK_2659 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_0318 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_1372 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:gap00280]
D GAPWK_1928 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_0731 Urea carboxylase without Allophanate hydrolase 2 domains K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D GAPWK_0237 Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:gap00290]
D GAPWK_1930 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GAPWK_0553 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GAPWK_0552 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GAPWK_0554 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D GAPWK_1013 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1926 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1014 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GAPWK_1927 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D GAPWK_1896 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GAPWK_1929 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GAPWK_1928 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GAPWK_0372 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GAPWK_0555 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:gap00300]
D GAPWK_2063 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GAPWK_0468 Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D GAPWK_2744 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GAPWK_1685 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GAPWK_1053 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GAPWK_1979 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D GAPWK_0523 Acetylornithine aminotransferase / N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GAPWK_1678 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GAPWK_0836 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GAPWK_0835 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GAPWK_0491 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GAPWK_0492 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:gap00310]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_0034 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GAPWK_0408 Diaminopimelate decarboxylase K23385 dokD; D-ornithine/D-lysine decarboxylase [EC:4.1.1.116]
D GAPWK_0237 Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00220 Arginine biosynthesis [PATH:gap00220]
D GAPWK_2768 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GAPWK_1370 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GAPWK_1371 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GAPWK_0429 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GAPWK_2770 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GAPWK_2769 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GAPWK_1754 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_0372 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GAPWK_0300 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D GAPWK_1369 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D GAPWK_1368 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D GAPWK_0523 Acetylornithine aminotransferase / N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GAPWK_1344 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:gap00330]
D GAPWK_0937 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GAPWK_1364 Glutamate 5-kinase / RNA-binding C-terminal domain PUA K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GAPWK_1362 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:gap00340]
D GAPWK_1575 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D GAPWK_1582 Phosphoribosyl-AMP cyclohydrolase / Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D GAPWK_1580 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D GAPWK_1579 Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D GAPWK_1581 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D GAPWK_1578 Histidinol-phosphatase / Imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D GAPWK_1811 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_1577 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_1576 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D GAPWK_0254 Fumarate reductase flavoprotein subunit K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism [PATH:gap00350]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_1811 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_1577 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_2468 Biosynthetic Aromatic amino acid aminotransferase alpha K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GAPWK_0384 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GAPWK_0360 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:gap00360]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_1811 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_1577 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_2468 Biosynthetic Aromatic amino acid aminotransferase alpha K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00380 Tryptophan metabolism
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gap00400]
D GAPWK_0250 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GAPWK_0256 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D GAPWK_1232 3-dehydroquinate dehydratase I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D GAPWK_2520 3-dehydroquinate dehydratase I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D GAPWK_2118 Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GAPWK_0298 Shikimate kinase III K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GAPWK_1227 Shikimate kinase III K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GAPWK_0919 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D GAPWK_2042 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D GAPWK_1967 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GAPWK_1966 Anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D GAPWK_1965 Indole-3-glycerol phosphate synthase / Phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D GAPWK_1963 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GAPWK_1964 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GAPWK_0102 Chorismate mutase I / Cyclohexadienyl dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D GAPWK_2068 Chorismate mutase I / Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D GAPWK_1525 Cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_1811 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_1577 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_2468 Biosynthetic Aromatic amino acid aminotransferase alpha K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:gap00410]
D GAPWK_0237 Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GAPWK_1263 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GAPWK_1093 dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D GAPWK_1511 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:gap00430]
D GAPWK_0751 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GAPWK_1614 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GAPWK_1615 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:gap00450]
D GAPWK_2197 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GAPWK_0117 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GAPWK_2774 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GAPWK_0687 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GAPWK_2647 Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GAPWK_2103 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:gap00460]
D GAPWK_1977 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GAPWK_0696 Beta-hexosaminidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GAPWK_0751 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GAPWK_1773 Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D GAPWK_2111 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:gap00470]
D GAPWK_1004 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GAPWK_0498 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GAPWK_0034 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GAPWK_2425 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GAPWK_0494 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GAPWK_0797 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D GAPWK_0836 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GAPWK_0835 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GAPWK_0408 Diaminopimelate decarboxylase K23385 dokD; D-ornithine/D-lysine decarboxylase [EC:4.1.1.116]
D GAPWK_0410 Putative cytoplasmic protein K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:gap00480]
D GAPWK_0751 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GAPWK_0729 Lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D GAPWK_1467 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GAPWK_1804 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GAPWK_1259 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GAPWK_0120 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D GAPWK_2158 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GAPWK_1367 Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D GAPWK_0400 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GAPWK_2139 Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D GAPWK_2409 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GAPWK_0264 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GAPWK_0485 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GAPWK_0217 Glutathionylspermidine synthase / Glutathionylspermidine amidohydrolase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:gap00511]
D GAPWK_2031 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D GAPWK_0967 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:gap00540]
D GAPWK_2753 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GAPWK_0502 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GAPWK_2333 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GAPWK_0783 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GAPWK_2754 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GAPWK_0924 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GAPWK_0965 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GAPWK_0926 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GAPWK_2772 3-deoxy-D-manno-octulosonic-acid transferase-like K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GAPWK_2461 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GAPWK_0281 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GAPWK_2150 Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D GAPWK_2140 ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D GAPWK_2535 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D GAPWK_1044 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D GAPWK_1042 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D GAPWK_1043 ADP-heptose--lipooligosaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D GAPWK_0559 Lipopolysaccharide core biosynthesis protein WaaP, heptosyl-I-kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D GAPWK_1734 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D GAPWK_0512 Lipopolysaccharide core biosynthesis protein RfaY K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D GAPWK_1572 Lipopolysaccharide core biosynthesis protein RfaZ K12981 waaZ; KDO transferase III [EC:2.4.99.-]
D GAPWK_0560 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D GAPWK_0770 UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:gap00541]
D GAPWK_2465 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GAPWK_2217 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GAPWK_0766 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GAPWK_0765 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GAPWK_0767 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GAPWK_0768 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GAPWK_0961 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GAPWK_0596 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:gap00550]
D GAPWK_0271 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GAPWK_1876 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GAPWK_0497 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GAPWK_0494 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GAPWK_0491 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GAPWK_0498 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GAPWK_0492 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GAPWK_2338 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GAPWK_0493 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GAPWK_0496 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GAPWK_0037 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D GAPWK_0705 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GAPWK_2418 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D GAPWK_0856 Penicillin-insensitive transglycosylase & transpeptidase PBP-1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D GAPWK_1716 Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D GAPWK_2803 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GAPWK_0490 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GAPWK_2801 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GAPWK_2076 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D GAPWK_2728 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:gap00543]
D GAPWK_2783 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:gap00730]
D GAPWK_2127 Hydroxymethylpyrimidine phosphate kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D GAPWK_0131 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GAPWK_0446 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GAPWK_1994 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GAPWK_2125 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GAPWK_2126 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D GAPWK_2459 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GAPWK_0844 Thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D GAPWK_0214 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GAPWK_1774 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:gap00740]
D GAPWK_1916 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GAPWK_0474 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GAPWK_0839 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D GAPWK_1032 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D GAPWK_2149 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GAPWK_1559 Riboflavin synthase eubacterial/eukaryotic K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GAPWK_0052 Riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D GAPWK_2105 acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D GAPWK_1505 non-specific acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D GAPWK_2125 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GAPWK_2098 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GAPWK_1790 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:gap00750]
D GAPWK_2637 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D GAPWK_0206 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D GAPWK_1372 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GAPWK_0470 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GAPWK_1782 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D GAPWK_1783 Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:gap00760]
D GAPWK_2157 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D GAPWK_0802 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GAPWK_1016 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GAPWK_1878 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GAPWK_2146 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D GAPWK_0673 NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family / Ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D GAPWK_1325 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D GAPWK_1884 UDP-sugar hydrolase; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D GAPWK_1871 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GAPWK_0892 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GAPWK_0398 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GAPWK_0456 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D GAPWK_0257 NAD synthetase / Glutamine amidotransferase chain of NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D GAPWK_0036 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D GAPWK_2766 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GAPWK_2310 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GAPWK_2311 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:gap00770]
D GAPWK_1013 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1926 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GAPWK_1014 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GAPWK_1927 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D GAPWK_1896 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GAPWK_1929 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GAPWK_1262 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D GAPWK_1263 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GAPWK_0850 Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D GAPWK_2779 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GAPWK_0398 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D GAPWK_2222 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GAPWK_0995 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GAPWK_0118 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D GAPWK_1601 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D GAPWK_0909 Acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D GAPWK_1928 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GAPWK_1093 dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D GAPWK_1511 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:gap00780]
D GAPWK_1745 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GAPWK_2433 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GAPWK_2237 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_2435 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_2752 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GAPWK_0171 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GAPWK_2793 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D GAPWK_1874 Biotin-protein ligase / Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:gap00785]
D GAPWK_0945 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D GAPWK_0944 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_0946 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GAPWK_0947 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:gap00790]
D GAPWK_0053 GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D GAPWK_2391 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D GAPWK_1802 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D GAPWK_2500 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GAPWK_2547 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GAPWK_2225 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GAPWK_2346 Dihydrofolate synthase / Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GAPWK_1916 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GAPWK_0539 Para-aminobenzoate synthase, amidotransferase component PabAb K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D GAPWK_0538 Para-aminobenzoate synthase, aminase component / Aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D GAPWK_1851 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GAPWK_1852 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GAPWK_0853 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GAPWK_0852 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GAPWK_0655 hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D GAPWK_2503 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GAPWK_2325 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GAPWK_2323 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GAPWK_2060 Molybdopterin biosynthesis Mog protein, molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GAPWK_1798 Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GAPWK_0042 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:gap00670]
D GAPWK_2225 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GAPWK_0600 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GAPWK_0781 Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GAPWK_2111 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GAPWK_2007 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GAPWK_0173 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GAPWK_0280 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GAPWK_2773 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GAPWK_1996 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:gap00860]
D GAPWK_0056 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GAPWK_1521 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D GAPWK_1082 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GAPWK_0459 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GAPWK_1822 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D GAPWK_1823 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D GAPWK_0321 Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GAPWK_0848 Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D GAPWK_0597 Protoporphyrinogen IX oxidase, oxygen-independent, HemG K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D GAPWK_2462 Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D GAPWK_1824 putative enzyme of heme biosynthesis K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D GAPWK_0195 Siroheme synthase / Precorrin-2 oxidase / Sirohydrochlorin ferrochelatase / Uroporphyrinogen-III methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D GAPWK_1468 Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gap00130]
D GAPWK_2549 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D GAPWK_2389 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D GAPWK_1790 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GAPWK_2072 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D GAPWK_1837 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D GAPWK_2145 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE / 2-heptaprenyl-1,4-naphthoquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D GAPWK_2761 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:gap00900]
D GAPWK_1994 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GAPWK_2794 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D GAPWK_0668 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D GAPWK_1523 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D GAPWK_0669 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D GAPWK_0208 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D GAPWK_0049 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D GAPWK_1790 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GAPWK_1993 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GAPWK_2472 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GAPWK_2338 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GAPWK_1671 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:gap00523]
D GAPWK_0766 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GAPWK_0765 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GAPWK_0767 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GAPWK_0768 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D GAPWK_2376 hypothetical protein K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D GAPWK_0765 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:gap00946]
D GAPWK_1977 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GAPWK_0696 Beta-hexosaminidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:gap00332]
D GAPWK_1364 Glutamate 5-kinase / RNA-binding C-terminal domain PUA K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GAPWK_1362 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:gap00261]
D GAPWK_2647 Sulfate adenylyltransferase, dissimilatory-type K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GAPWK_2063 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GAPWK_0468 Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D GAPWK_2744 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GAPWK_1685 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GAPWK_1053 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:gap00521]
D GAPWK_0931 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GAPWK_1832 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GAPWK_0113 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GAPWK_0766 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GAPWK_0765 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GAPWK_0767 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GAPWK_0768 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D GAPWK_0931 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:gap00525]
D GAPWK_0766 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GAPWK_0765 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:gap00401]
D GAPWK_0102 Chorismate mutase I / Cyclohexadienyl dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_1811 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_1577 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_2468 Biosynthetic Aromatic amino acid aminotransferase alpha K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D GAPWK_1967 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D GAPWK_2436 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GAPWK_2237 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_2435 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_0171 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GAPWK_2434 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:gap00999]
D GAPWK_2426 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GAPWK_1977 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GAPWK_0696 Beta-hexosaminidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D GAPWK_0410 Putative cytoplasmic protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:gap00362]
D GAPWK_1915 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D GAPWK_1491 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D GAPWK_0136 Ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
C 00627 Aminobenzoate degradation [PATH:gap00627]
D GAPWK_0545 Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GAPWK_1790 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GAPWK_1791 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:gap00625]
D GAPWK_0360 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GAPWK_0384 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D GAPWK_1915 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:gap00633]
D GAPWK_2214 Oxygen-insensitive NADPH nitroreductase K10678 nfsA; nitroreductase [EC:1.-.-.-]
D GAPWK_0556 Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D GAPWK_1915 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:gap00626]
D GAPWK_0360 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GAPWK_0384 Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:gap03020]
D GAPWK_2445 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GAPWK_2444 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GAPWK_0165 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GAPWK_0831 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:gap03010]
D GAPWK_0921 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D GAPWK_2800 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D GAPWK_0146 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D GAPWK_0164 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D GAPWK_0157 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D GAPWK_0757 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D GAPWK_2568 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D GAPWK_0154 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D GAPWK_0880 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D GAPWK_0139 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D GAPWK_0163 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D GAPWK_2567 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D GAPWK_0162 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D GAPWK_0153 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D GAPWK_2039 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D GAPWK_0416 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D GAPWK_0149 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D GAPWK_0755 SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D GAPWK_0144 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D GAPWK_2452 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D GAPWK_0460 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D GAPWK_2448 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D GAPWK_0143 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D GAPWK_0140 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D GAPWK_0141 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D GAPWK_0152 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D GAPWK_0155 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D GAPWK_2446 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D GAPWK_0754 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D GAPWK_2447 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D GAPWK_2449 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D GAPWK_0879 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D GAPWK_0150 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D GAPWK_0159 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D GAPWK_0147 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D GAPWK_0166 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D GAPWK_0156 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D GAPWK_0413 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D GAPWK_1436 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D GAPWK_0198 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D GAPWK_0145 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D GAPWK_0142 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D GAPWK_0151 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D GAPWK_0484 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D GAPWK_0199 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D GAPWK_0295 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D GAPWK_0148 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D GAPWK_0158 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D GAPWK_2199 LSU ribosomal protein L31p, zinc-dependent K02909 RP-L31; large subunit ribosomal protein L31
D GAPWK_2439 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D GAPWK_0294 LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D GAPWK_0452 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D GAPWK_1435 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D GAPWK_0161 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D GAPWK_2816 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2868 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2810 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2864 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2813 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2819 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2866 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2862 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2820 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2865 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2861 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2814 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:gap00970]
D GAPWK_2857 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GAPWK_2812 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GAPWK_2818 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GAPWK_2837 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2848 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2829 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2830 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2815 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GAPWK_2826 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GAPWK_2845 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GAPWK_2860 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GAPWK_2841 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GAPWK_2850 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GAPWK_2852 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GAPWK_2853 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GAPWK_2863 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GAPWK_2867 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GAPWK_2836 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2839 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2843 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2824 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2870 tRNA-His K14226 tRNA-His; tRNA His
D GAPWK_2811 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GAPWK_2817 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GAPWK_2838 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2844 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2846 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2851 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2854 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2827 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2840 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GAPWK_2833 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GAPWK_2858 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GAPWK_2842 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2849 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2872 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2855 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2869 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GAPWK_2821 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GAPWK_2871 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GAPWK_2832 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GAPWK_2856 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GAPWK_2831 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GAPWK_2822 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GAPWK_2825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GAPWK_2859 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GAPWK_2823 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GAPWK_2834 tRNA-Val K14237 tRNA-Val; tRNA Val
D GAPWK_2835 tRNA-Val K14237 tRNA-Val; tRNA Val
D GAPWK_2847 tRNA-Val K14237 tRNA-Val; tRNA Val
D GAPWK_0056 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GAPWK_0247 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GAPWK_0532 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GAPWK_2392 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GAPWK_2156 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GAPWK_0327 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GAPWK_0326 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GAPWK_1433 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GAPWK_0530 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GAPWK_2065 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GAPWK_2103 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GAPWK_0173 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GAPWK_1264 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GAPWK_0895 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GAPWK_0051 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GAPWK_0073 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GAPWK_0990 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GAPWK_0338 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GAPWK_0209 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GAPWK_1437 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GAPWK_1438 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GAPWK_0205 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GAPWK_2123 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:gap03060]
D GAPWK_0160 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D GAPWK_0386 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D GAPWK_0445 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GAPWK_2380 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D GAPWK_2379 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D GAPWK_2381 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GAPWK_0455 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GAPWK_2240 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GAPWK_0427 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D GAPWK_2470 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GAPWK_0028 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D GAPWK_2143 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D GAPWK_2142 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D GAPWK_2141 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D GAPWK_2073 Twin-arginine translocation protein TatA K03425 tatE; sec-independent protein translocase protein TatE
D GAPWK_2015 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GAPWK_0050 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:gap04122]
D GAPWK_0131 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GAPWK_0704 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GAPWK_0015 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D GAPWK_2749 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D GAPWK_2750 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D GAPWK_0666 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D GAPWK_1819 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GAPWK_2323 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GAPWK_2503 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GAPWK_2324 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D GAPWK_2397 Molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D GAPWK_2325 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GAPWK_2060 Molybdopterin biosynthesis Mog protein, molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GAPWK_0446 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:gap03018]
D GAPWK_0278 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GAPWK_2491 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D GAPWK_0261 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D GAPWK_1021 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GAPWK_2038 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GAPWK_1332 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GAPWK_2005 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GAPWK_2036 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GAPWK_1627 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GAPWK_0263 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GAPWK_0062 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GAPWK_2724 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GAPWK_0020 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D GAPWK_1455 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GAPWK_2315 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:gap03030]
D GAPWK_1462 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GAPWK_2432 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GAPWK_1624 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GAPWK_2354 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GAPWK_0893 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GAPWK_0846 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D GAPWK_1260 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GAPWK_0232 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GAPWK_1954 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GAPWK_0461 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GAPWK_0929 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GAPWK_1463 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GAPWK_2755 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GAPWK_0054 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GAPWK_1913 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:gap03410]
D GAPWK_0203 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GAPWK_0069 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GAPWK_2069 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GAPWK_2417 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GAPWK_2137 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GAPWK_0103 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GAPWK_1310 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GAPWK_1717 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GAPWK_0054 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GAPWK_0344 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GAPWK_1913 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:gap03420]
D GAPWK_1554 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GAPWK_1290 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D GAPWK_0789 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D GAPWK_1415 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D GAPWK_0840 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GAPWK_0054 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GAPWK_1913 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:gap03430]
D GAPWK_0821 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GAPWK_0018 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D GAPWK_0309 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D GAPWK_0840 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GAPWK_1423 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D GAPWK_0104 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GAPWK_1992 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GAPWK_0344 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GAPWK_0929 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GAPWK_2432 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GAPWK_0232 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GAPWK_1624 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GAPWK_0893 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GAPWK_2354 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GAPWK_1462 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GAPWK_1260 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GAPWK_0846 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D GAPWK_1913 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GAPWK_2120 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:gap03440]
D GAPWK_0344 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GAPWK_0929 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GAPWK_0231 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GAPWK_1429 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GAPWK_1292 Recombination protein RecR K06187 recR; recombination protein RecR
D GAPWK_0534 RecA protein K03553 recA; recombination protein RecA
D GAPWK_0054 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GAPWK_1622 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GAPWK_1621 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GAPWK_1909 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GAPWK_0833 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GAPWK_2032 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GAPWK_0092 Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GAPWK_0675 Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GAPWK_2432 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GAPWK_0232 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GAPWK_1624 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GAPWK_0893 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GAPWK_2354 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GAPWK_1462 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GAPWK_1260 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GAPWK_0846 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D GAPWK_2326 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GAPWK_0756 hypothetical protein K02686 priB; primosomal replication protein N
D GAPWK_1617 Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
D GAPWK_0640 Superfamily I DNA and RNA helicase and helicase subunits K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:gap03250]
D GAPWK_0124 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:gap02010]
D GAPWK_2655 Sulfate and thiosulfate binding protein CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D GAPWK_2654 Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D GAPWK_2653 Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D GAPWK_2652 Sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D GAPWK_0786 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D GAPWK_0785 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D GAPWK_0784 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GAPWK_0788 Putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D GAPWK_1737 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D GAPWK_1736 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D GAPWK_1735 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D GAPWK_1028 Putrescine ABC transporter putrescine-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D GAPWK_1031 Putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D GAPWK_1030 Putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D GAPWK_1029 Putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D GAPWK_2167 putative ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D GAPWK_2166 putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GAPWK_2165 putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GAPWK_2168 Uncharacterized protein YrbB K07122 mlaB; phospholipid transport system transporter-binding protein
D GAPWK_2164 putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GAPWK_1904 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D GAPWK_1905 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D GAPWK_1906 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GAPWK_1907 Ribose ABC transport system, high affinity permease RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D GAPWK_1418 Arginine ABC transporter, periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D GAPWK_1416 Arginine ABC transporter, permease protein ArtM K09998 artM; arginine transport system permease protein
D GAPWK_1417 Arginine ABC transporter, permease protein ArtQ K09999 artQ; arginine transport system permease protein
D GAPWK_1419 Arginine ABC transporter, ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_0679 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D GAPWK_0677 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D GAPWK_0678 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D GAPWK_0676 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_2183 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GAPWK_2186 amino acid ABC transporter permease protein K10009 tcyB; L-cystine transport system permease protein
D GAPWK_2185 Cysteine ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_2496 putative amino-acid ABC transporter binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D GAPWK_2497 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D GAPWK_2498 putative amino-acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D GAPWK_1308 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_1787 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_2160 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_2538 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_1785 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D GAPWK_2163 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D GAPWK_2537 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D GAPWK_1786 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GAPWK_2162 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GAPWK_2536 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GAPWK_2490 Peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D GAPWK_2489 peptide ABC transporter, permease K19228 sapC; cationic peptide transport system permease protein
D GAPWK_2488 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D GAPWK_2487 Peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D GAPWK_1331 Nickel ABC transporter, periplasmic nickel-binding protein NikA K15584 nikA; nickel transport system substrate-binding protein
D GAPWK_1330 Nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein
D GAPWK_1329 Nickel transport system permease protein NikC K15586 nikC; nickel transport system permease protein
D GAPWK_1328 peptide ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D GAPWK_1327 oligopeptide ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D GAPWK_2369 ABC transporter, periplasmic substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GAPWK_2368 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D GAPWK_2367 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D GAPWK_2366 Putative ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GAPWK_2420 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D GAPWK_2422 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D GAPWK_2421 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GAPWK_1950 Manganese ABC transporter, periplasmic-binding protein SitA K11604 sitA; manganese/iron transport system substrate-binding protein
D GAPWK_1952 Manganese ABC transporter, inner membrane permease protein SitC K11605 sitC; manganese/iron transport system permease protein
D GAPWK_1953 Manganese ABC transporter, inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D GAPWK_1951 Manganese ABC transporter, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein
D GAPWK_0087 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D GAPWK_1441 Capsular polysaccharide export system inner membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein
D GAPWK_1442 Capsular polysaccharide ABC transporter, permease protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D GAPWK_1443 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D GAPWK_1551 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D GAPWK_1553 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D GAPWK_1552 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GAPWK_1258 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D GAPWK_1257 putative Permease K11720 lptG; lipopolysaccharide export system permease protein
D GAPWK_0549 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GAPWK_0030 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D GAPWK_0029 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GAPWK_0883 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GAPWK_1405 YbtP K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GAPWK_0884 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GAPWK_1406 YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GAPWK_0771 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GAPWK_0772 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GAPWK_2299 Putative secretion ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GAPWK_2075 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GAPWK_0685 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GAPWK_0686 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D GAPWK_0045 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D GAPWK_1469 ABC transporter-like K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:gap02060]
D GAPWK_2478 Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GAPWK_1590 Phosphotransferase system HPr enzyme K02784 ptsH; phosphocarrier protein HPr
D GAPWK_0476 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D GAPWK_2477 PTS system, phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D GAPWK_2479 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GAPWK_2748 PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D GAPWK_2178 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_1731 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_1841 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_2641 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_1508 PTS system, maltose and glucose-specific IIC component / PTS system, maltose and glucose-specific IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GAPWK_2619 PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D GAPWK_0593 PTS system, mannitol-specific IIB component / PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D GAPWK_0748 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GAPWK_0746 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GAPWK_0750 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D GAPWK_0957 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_2742 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_1302 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_0420 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GAPWK_0955 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0419 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_1300 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0418 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_1299 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_2737 PTS system, mannose-specific IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GAPWK_2738 PTS system, mannose-specific IIC component K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GAPWK_2739 PTS system, mannose-specific IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GAPWK_0308 PTS system, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D GAPWK_0307 PTS system, sorbose-specific IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D GAPWK_0306 PTS system, sorbose-specific IIC component K02814 sorA; sorbose PTS system EIIC component
D GAPWK_0305 PTS system, sorbose-specific IID component K02815 sorM; sorbose PTS system EIID component
D GAPWK_0314 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GAPWK_1665 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GAPWK_0313 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D GAPWK_1666 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D GAPWK_0312 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D GAPWK_1667 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D GAPWK_0515 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_2233 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0180 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_2663 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0375 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0516 Putative carbohydrate PTS system, IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2232 PTS system, galactitol-specific IIB component, putative K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2234 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0181 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2661 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0376 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0182 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2660 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0377 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0517 Putative carbohydrate PTS system, IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2231 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2235 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2403 Ascorbate-specific PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GAPWK_0366 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GAPWK_2001 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_2404 Ascorbate-specific PTS system, EIIC component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_0365 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_0301 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_2000 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_0364 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_0437 Fructose-specific phosphocarrier protein HPr / PTS system, fructose-specific IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D GAPWK_1587 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIC component / PTS system, mannose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_0439 PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_2717 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_0477 PTS system, tagatose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_2718 PTS system, fructose-specific IIBC component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GAPWK_1588 PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GAPWK_2719 hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GAPWK_0438 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:gap03070]
D GAPWK_2099 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D GAPWK_2380 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D GAPWK_2379 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D GAPWK_0386 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D GAPWK_0445 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GAPWK_0160 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D GAPWK_2381 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GAPWK_0455 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GAPWK_2240 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GAPWK_0028 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D GAPWK_0427 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D GAPWK_2470 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GAPWK_2143 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D GAPWK_2142 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D GAPWK_2141 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D GAPWK_2073 Twin-arginine translocation protein TatA K03425 tatE; sec-independent protein translocase protein TatE
D GAPWK_0986 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0900 TssI/VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1354 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0949 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0608 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0578 TssI/VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1853 TssI/VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0650 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1500 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0355 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1944 tssD K11903 hcp; type VI secretion system secreted protein Hcp
D GAPWK_1936 tssJ K11906 vasD; type VI secretion system protein VasD
D GAPWK_1940 tssM K11891 impL; type VI secretion system protein ImpL
D GAPWK_1946 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D GAPWK_1943 TssH/ClpB protein K11907 vasG; type VI secretion system protein VasG
D GAPWK_0222 PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:gap02020]
D GAPWK_1527 Putative response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GAPWK_2105 acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D GAPWK_1505 non-specific acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D GAPWK_0448 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GAPWK_0447 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GAPWK_0244 Transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D GAPWK_0877 Sensor protein basS/pmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D GAPWK_0876 Transcriptional regulatory protein basR/pmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D GAPWK_1040 Osmosensitive K+ channel histidine kinase KdpD K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GAPWK_1039 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GAPWK_2594 Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D GAPWK_2595 Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D GAPWK_2592 Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D GAPWK_2593 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D GAPWK_2596 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D GAPWK_0233 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GAPWK_2272 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D GAPWK_0245 Sensory histidine kinase in two-component regulatory system with RstA K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D GAPWK_2728 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GAPWK_0076 Vancomycin B-type resistance protein VanW K18346 vanW; vancomycin resistance protein VanW
D GAPWK_1033 TonB-dependent receptor; Outer membrane receptor for ferric enterobactin and colicins B, D K19611 fepA; ferric enterobactin receptor
D GAPWK_2189 Sensor kinase CitA, DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D GAPWK_2188 Transcriptional regulatory protein CitB, DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D GAPWK_2192 [Citrate [pro-3S]-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D GAPWK_2193 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D GAPWK_2194 Citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D GAPWK_2195 Citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D GAPWK_2196 Holo-citrate lyase synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D GAPWK_2176 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D GAPWK_0506 Two-component sensor histidine kinase, malate K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D GAPWK_0505 two-component response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D GAPWK_0507 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GAPWK_0508 Malate Na(+) symporter K11616 maeN; malate:Na+ symporter
D GAPWK_0197 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GAPWK_0196 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GAPWK_2363 Fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D GAPWK_2364 Fumarate reductase subunit D (Fumarate reductase 13 kDa hydrophobic protein) K00247 frdD; succinate dehydrogenase subunit D
D GAPWK_0531 Carbon storage regulator K03563 csrA; carbon storage regulator
D GAPWK_0708 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0709 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0710 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0711 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0712 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0713 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0714 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0715 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0720 RcpC K02279 cpaB; pilus assembly protein CpaB
D GAPWK_0721 Flp pilus assembly protein, secretin CpaC K02280 cpaC; pilus assembly protein CpaC
D GAPWK_0722 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D GAPWK_0716 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D GAPWK_0717 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D GAPWK_0718 Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D GAPWK_2269 [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D GAPWK_0258 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D GAPWK_0430 Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D GAPWK_0431 Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D GAPWK_0429 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GAPWK_0550 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D GAPWK_0676 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_0677 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D GAPWK_0678 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D GAPWK_0679 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D GAPWK_2339 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GAPWK_2089 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GAPWK_2088 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GAPWK_2099 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D GAPWK_1440 Capsular polysaccharide biosynthesis/export periplasmic protein WcbC K01991 wza; polysaccharide biosynthesis/export protein
D GAPWK_2610 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:gap02024]
D GAPWK_1914 S-ribosylhomocysteine lyase / Autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D GAPWK_0020 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D GAPWK_1967 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GAPWK_0250 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GAPWK_2594 Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D GAPWK_2595 Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D GAPWK_0409 Putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D GAPWK_0006 Pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D GAPWK_2339 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GAPWK_2245 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GAPWK_1916 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GAPWK_0474 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GAPWK_0358 Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D GAPWK_0455 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GAPWK_0386 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D GAPWK_0445 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GAPWK_0160 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D GAPWK_2381 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GAPWK_2240 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GAPWK_0028 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D GAPWK_0427 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D GAPWK_2470 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:gap02030]
D GAPWK_1904 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D GAPWK_2586 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GAPWK_2580 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GAPWK_2579 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GAPWK_2596 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D GAPWK_2597 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:gap02040]
D GAPWK_2588 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GAPWK_2587 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GAPWK_2586 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GAPWK_2585 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D GAPWK_2584 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GAPWK_2583 Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D GAPWK_2582 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D GAPWK_2581 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D GAPWK_2580 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GAPWK_2579 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GAPWK_2578 Flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GAPWK_2577 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GAPWK_2576 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GAPWK_2575 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GAPWK_2613 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GAPWK_2612 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GAPWK_2609 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D GAPWK_2608 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GAPWK_2607 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GAPWK_2606 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D GAPWK_2605 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D GAPWK_2604 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D GAPWK_2603 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GAPWK_2602 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D GAPWK_2601 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GAPWK_2600 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D GAPWK_2598 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GAPWK_2599 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D GAPWK_2592 Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D GAPWK_2591 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D GAPWK_2590 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D GAPWK_2596 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D GAPWK_2597 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D GAPWK_2610 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D GAPWK_2611 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D GAPWK_2183 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GAPWK_0462 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GAPWK_2594 Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D GAPWK_2595 Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D GAPWK_0550 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D GAPWK_2593 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GAPWK_1021 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:gap01501]
D GAPWK_0689 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GAPWK_0760 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GAPWK_0245 Sensory histidine kinase in two-component regulatory system with RstA K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D GAPWK_1911 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D GAPWK_1910 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D GAPWK_2099 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D GAPWK_0705 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GAPWK_2803 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GAPWK_0490 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:gap01502]
D GAPWK_0498 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GAPWK_1004 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GAPWK_0492 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GAPWK_0493 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GAPWK_0496 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GAPWK_2728 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GAPWK_0076 Vancomycin B-type resistance protein VanW K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:gap01503]
D GAPWK_0245 Sensory histidine kinase in two-component regulatory system with RstA K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D GAPWK_0877 Sensor protein basS/pmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D GAPWK_0876 Transcriptional regulatory protein basR/pmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D GAPWK_2490 Peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D GAPWK_2489 peptide ABC transporter, permease K19228 sapC; cationic peptide transport system permease protein
D GAPWK_2488 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D GAPWK_2487 Peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D GAPWK_0448 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GAPWK_0447 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GAPWK_2807 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GAPWK_0017 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GAPWK_0044 Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GAPWK_0124 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GAPWK_1911 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D GAPWK_1910 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D GAPWK_2099 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D GAPWK_2753 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GAPWK_2272 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:gap01000]
C 01001 Protein kinases [BR:gap01001]
D GAPWK_0222 PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D GAPWK_0448 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GAPWK_0877 Sensor protein basS/pmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D GAPWK_1040 Osmosensitive K+ channel histidine kinase KdpD K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GAPWK_0245 Sensory histidine kinase in two-component regulatory system with RstA K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D GAPWK_2729 Putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D GAPWK_0197 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GAPWK_2189 Sensor kinase CitA, DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D GAPWK_0506 Two-component sensor histidine kinase, malate K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D GAPWK_1976 Autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D GAPWK_0430 Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:gap01009]
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GAPWK_1839 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D GAPWK_2508 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:gap01002]
D GAPWK_0050 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GAPWK_0727 flp operon protein B K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D GAPWK_0077 Glutamine amidotransferase, class I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GAPWK_1612 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GAPWK_2299 Putative secretion ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GAPWK_1812 putative lipoprotein nlpC precursor K13695 nlpC; probable lipoprotein NlpC
D GAPWK_2343 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GAPWK_0403 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GAPWK_0595 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GAPWK_0060 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GAPWK_0272 DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 K03152 thiJ; protein deglycase [EC:3.5.1.124]
D GAPWK_2158 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GAPWK_2170 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D GAPWK_1388 hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GAPWK_2728 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GAPWK_0917 Protease III precursor K01407 ptrA; protease III [EC:3.4.24.55]
D GAPWK_1259 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GAPWK_0120 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D GAPWK_1678 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GAPWK_2412 Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D GAPWK_1367 Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D GAPWK_2133 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D GAPWK_1751 Allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D GAPWK_2419 Cell wall endopeptidase, family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D GAPWK_1472 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GAPWK_2474 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GAPWK_2546 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GAPWK_0369 Putative metalloprotease yggG K07387 K07387; metalloprotease [EC:3.4.24.-]
D GAPWK_0371 Putative metalloprotease yggG K07387 K07387; metalloprotease [EC:3.4.24.-]
D GAPWK_0336 Exported zinc metalloprotease YfgC precursor K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D GAPWK_2336 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GAPWK_2201 Outer membrane stress sensor protease DegQ, serine protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D GAPWK_2200 Outer membrane stress sensor protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D GAPWK_2743 prolyl oligopeptidase family protein K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D GAPWK_2801 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GAPWK_2076 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D GAPWK_2331 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GAPWK_2329 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GAPWK_0942 ATP-dependent protease La Type II K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D GAPWK_0993 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GAPWK_1350 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D GAPWK_2015 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GAPWK_2044 Tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GAPWK_2320 Protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D GAPWK_0601 putative protease sohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D GAPWK_1278 putative prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D GAPWK_2083 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D GAPWK_0751 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GAPWK_2629 Gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D GAPWK_1361 Putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D GAPWK_0111 Putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D GAPWK_0112 Putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D GAPWK_0828 TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D GAPWK_2050 TldD protein, part of proposed TldE/TldD proteolytic complex K03568 tldD; TldD protein
D GAPWK_1027 proteinase inhibitor I11, ecotin K08276 eco; ecotin
D GAPWK_0855 Alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D GAPWK_1715 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D GAPWK_0023 HflC protein K04087 hflC; modulator of FtsH protease HflC
D GAPWK_0022 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:gap01003]
D GAPWK_0037 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D GAPWK_0856 Penicillin-insensitive transglycosylase & transpeptidase PBP-1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D GAPWK_1716 Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D GAPWK_2418 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D GAPWK_0705 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GAPWK_1989 Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:gap01005]
D GAPWK_2753 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GAPWK_2754 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GAPWK_0502 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GAPWK_2333 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GAPWK_0783 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GAPWK_0924 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GAPWK_0281 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GAPWK_2772 3-deoxy-D-manno-octulosonic-acid transferase-like K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GAPWK_2461 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GAPWK_0965 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GAPWK_0926 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GAPWK_1042 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D GAPWK_1043 ADP-heptose--lipooligosaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D GAPWK_0560 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D GAPWK_0770 UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D GAPWK_0559 Lipopolysaccharide core biosynthesis protein WaaP, heptosyl-I-kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D GAPWK_0512 Lipopolysaccharide core biosynthesis protein RfaY K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D GAPWK_1572 Lipopolysaccharide core biosynthesis protein RfaZ K12981 waaZ; KDO transferase III [EC:2.4.99.-]
D GAPWK_1734 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D GAPWK_2150 Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D GAPWK_2535 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D GAPWK_2140 ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D GAPWK_1044 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:gap01011]
D GAPWK_0271 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GAPWK_1876 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GAPWK_0497 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GAPWK_0494 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GAPWK_0491 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GAPWK_0498 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GAPWK_1004 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GAPWK_2425 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GAPWK_0493 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GAPWK_0496 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GAPWK_2407 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GAPWK_0705 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GAPWK_2418 Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D GAPWK_0856 Penicillin-insensitive transglycosylase & transpeptidase PBP-1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D GAPWK_1716 Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D GAPWK_2803 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GAPWK_0490 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GAPWK_2801 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GAPWK_2076 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D GAPWK_0037 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D GAPWK_2728 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GAPWK_1388 hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GAPWK_2419 Cell wall endopeptidase, family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D GAPWK_0129 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GAPWK_2079 Membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D GAPWK_0691 Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D GAPWK_0525 Membrane-bound lytic murein transglycosylase C precursor K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D GAPWK_1465 Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D GAPWK_1005 protein YceG like K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D GAPWK_2807 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GAPWK_0017 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GAPWK_1006 N-acetylmuramoyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:gap01004]
D GAPWK_2436 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GAPWK_2437 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GAPWK_1745 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GAPWK_2433 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GAPWK_2237 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_2435 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GAPWK_0941 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D GAPWK_2752 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GAPWK_0171 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GAPWK_2095 Acyl-CoA thioesterase YciA, involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D GAPWK_2521 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D GAPWK_2438 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GAPWK_1291 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GAPWK_1046 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:gap01008]
C 01006 Prenyltransferases [BR:gap01006]
D GAPWK_1993 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GAPWK_2472 Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GAPWK_2338 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GAPWK_0019 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GAPWK_2761 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D GAPWK_2549 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:gap01007]
D GAPWK_0056 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GAPWK_0247 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GAPWK_2502 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GAPWK_0205 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GAPWK_2123 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GAPWK_2065 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GAPWK_0990 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GAPWK_2103 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GAPWK_0051 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GAPWK_1264 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GAPWK_0895 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GAPWK_0073 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GAPWK_2392 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GAPWK_2156 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GAPWK_0209 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GAPWK_0327 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GAPWK_0326 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GAPWK_0530 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GAPWK_0338 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GAPWK_1433 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GAPWK_0532 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GAPWK_1437 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GAPWK_1438 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GAPWK_2493 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GAPWK_0372 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GAPWK_2468 Biosynthetic Aromatic amino acid aminotransferase alpha K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GAPWK_1811 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_1577 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GAPWK_0523 Acetylornithine aminotransferase / N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GAPWK_0237 Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GAPWK_1082 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GAPWK_1928 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GAPWK_0538 Para-aminobenzoate synthase, aminase component / Aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D GAPWK_1372 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GAPWK_1746 Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:gap00194]
D GAPWK_0093 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GAPWK_0094 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GAPWK_0095 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GAPWK_0096 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GAPWK_0097 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GAPWK_0098 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GAPWK_0099 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GAPWK_0100 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:gap03000]
D GAPWK_2630 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2646 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2008 Arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D GAPWK_0812 L-rhamnose operon transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D GAPWK_0813 HTH-type transcriptional activator rhaS (L-rhamnose operon regulatory protein rhaS) K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D GAPWK_1493 helix-turn-helix-domain containing protein, AraC type K05372 ybtA; AraC family transcriptional regulator
D GAPWK_0127 Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D GAPWK_0862 Right origin-binding protein K19056 tetD; AraC family transcriptional regulator, transposon Tn10 TetD protein
D GAPWK_1526 Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GAPWK_1241 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GAPWK_0911 HTH-type transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D GAPWK_2314 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D GAPWK_0320 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D GAPWK_1747 DNA-binding transcriptional activator of the allD operon K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D GAPWK_1583 Cys regulon transcriptional activator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D GAPWK_2651 Alkanesulfonate utilization operon LysR-family regulator CbI K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D GAPWK_0799 D-serine dehydratase transcriptional activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D GAPWK_1540 Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D GAPWK_2795 Deoxyribose operon repressor, DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D GAPWK_0184 Galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D GAPWK_2229 transcriptional regulator, DeoR family K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D GAPWK_0292 L-fucose operon activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D GAPWK_0317 Glucitol operon repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D GAPWK_2405 Ascorbate utilization transcriptional regulator UlaR, HTH-type K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D GAPWK_1546 DeoR-type transcriptional regulator YihW Cluster I K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
D GAPWK_2566 Xylose activator XylR (AraC family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GAPWK_1902 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GAPWK_2029 Galactose operon repressor, GalR-LacI family of transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GAPWK_1957 hypothetical protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D GAPWK_0436 Fructose repressor FruR, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D GAPWK_2249 Sucrose operon repressor ScrR, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D GAPWK_2275 Sucrose operon repressor ScrR, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D GAPWK_2618 Trehalose operon transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D GAPWK_0070 Gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D GAPWK_1730 regulatory protein GntR, HTH:UbiC transcription regulator-associated K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D GAPWK_1506 Transcriptional regulator of succinyl CoA synthetase operon K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D GAPWK_0959 putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GAPWK_2207 Uxu operon transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D GAPWK_2262 Hexuronate utilization operon transcriptional repressor ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D GAPWK_0544 Transcriptional regulator, GntR family K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D GAPWK_2253 Regulator of L-galactonate catabolism YjjM K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
D GAPWK_0865 Transcriptional regulator, TetR family K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D GAPWK_0863 Transposon Tn10 tetC protein K19047 tetC; TetR/AcrR family transcriptional regulator, repressor of tetCD
D GAPWK_2781 Transcriptional regulator SlmA, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D GAPWK_0738 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D GAPWK_2313 Unsaturated fatty acid biosynthesis repressor FabR, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D GAPWK_1574 Transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GAPWK_2093 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GAPWK_2245 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GAPWK_0012 Transcriptional regulator KdgR, KDG operon repressor K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GAPWK_2339 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GAPWK_1450 Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D GAPWK_2571 Fumarate and nitrate reduction regulatory protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D GAPWK_0130 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D GAPWK_1874 Biotin-protein ligase / Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GAPWK_1901 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GAPWK_0128 Transcriptional repressor protein TrpR K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D GAPWK_1817 putative transcriptional regulator K07724 ner; Ner family transcriptional regulator
D GAPWK_2047 Ner-like regulatory protein K07724 ner; Ner family transcriptional regulator
D GAPWK_2146 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D GAPWK_0673 NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family / Ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D GAPWK_0389 Sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator
D GAPWK_0407 Putative regulatory protein K06714 rocR; arginine utilization regulatory protein
D GAPWK_0787 DNA-binding domain of ModE / Molybdate-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D GAPWK_2198 Methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D GAPWK_1840 Beta-glucoside bgl operon antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator
D GAPWK_2639 Beta-glucoside bgl operon antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator
D GAPWK_2002 Transcriptional antiterminator bglG:Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K03483 mtlR; mannitol operon transcriptional activator
D GAPWK_0747 Transcriptional antiterminator of lichenan operon, BglG family K03491 licR; probable licABCH operon transcriptional regulator
D GAPWK_2062 Arginine pathway regulatory protein ArgR, repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D GAPWK_2745 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family K02565 nagC; N-acetylglucosamine repressor
D GAPWK_0591 Mannitol operon repressor K02562 mtlR; mannitol operon repressor
D GAPWK_1774 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D GAPWK_0761 Transcriptional repressor protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D GAPWK_2282 hypothetical protein K07733 alpA; prophage regulatory protein
D GAPWK_1086 Transcriptional regulator in PFGI-1-like cluster K07733 alpA; prophage regulatory protein
D GAPWK_1269 Putative DNA binding protein K07733 alpA; prophage regulatory protein
D GAPWK_1806 UPF0301 protein YqgE K07735 algH; putative transcriptional regulator
D GAPWK_2501 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D GAPWK_0473 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D GAPWK_2627 Transcriptional regulatory protein RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D GAPWK_0487 Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:gap03021]
D GAPWK_0165 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GAPWK_2445 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GAPWK_2444 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GAPWK_0831 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GAPWK_0462 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GAPWK_2019 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GAPWK_0031 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D GAPWK_0550 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D GAPWK_2593 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D GAPWK_1961 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GAPWK_2148 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D GAPWK_0387 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GAPWK_0881 Stringent starvation protein A K03599 sspA; stringent starvation protein A
D GAPWK_0882 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D GAPWK_2018 Sigma factor RpoE negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D GAPWK_2017 Sigma factor RpoE negative regulatory protein RseB precursor K03598 rseB; sigma-E factor negative regulatory protein RseB
D GAPWK_2501 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D GAPWK_2543 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GAPWK_1891 Transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D GAPWK_0263 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:gap03019]
D GAPWK_2491 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D GAPWK_2051 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GAPWK_2014 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GAPWK_2005 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GAPWK_2460 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GAPWK_0261 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D GAPWK_1332 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GAPWK_2036 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GAPWK_1627 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GAPWK_1021 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GAPWK_2038 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GAPWK_0263 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GAPWK_0274 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GAPWK_0062 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GAPWK_2724 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GAPWK_0020 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D GAPWK_1455 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GAPWK_2315 Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D GAPWK_0278 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GAPWK_0531 Carbon storage regulator K03563 csrA; carbon storage regulator
D GAPWK_2762 Ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D GAPWK_0968 Ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D GAPWK_0330 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
D GAPWK_1452 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:gap03011]
D GAPWK_0921 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D GAPWK_2800 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D GAPWK_0146 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D GAPWK_0164 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D GAPWK_0157 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D GAPWK_0757 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D GAPWK_2568 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D GAPWK_0154 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D GAPWK_0880 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D GAPWK_0139 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D GAPWK_0163 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D GAPWK_2567 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D GAPWK_0162 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D GAPWK_0153 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D GAPWK_2039 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D GAPWK_0416 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D GAPWK_0149 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D GAPWK_0755 SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D GAPWK_0144 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D GAPWK_2452 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D GAPWK_0460 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D GAPWK_2448 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D GAPWK_0143 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D GAPWK_0140 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D GAPWK_0141 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D GAPWK_0152 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D GAPWK_0155 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D GAPWK_0754 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D GAPWK_2447 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D GAPWK_2449 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D GAPWK_2446 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D GAPWK_0879 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D GAPWK_0150 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D GAPWK_0159 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D GAPWK_0147 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D GAPWK_0166 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D GAPWK_0156 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D GAPWK_0413 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D GAPWK_1436 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D GAPWK_0198 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D GAPWK_0145 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D GAPWK_0142 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D GAPWK_0151 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D GAPWK_0199 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D GAPWK_0295 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D GAPWK_0148 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D GAPWK_0158 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D GAPWK_2199 LSU ribosomal protein L31p, zinc-dependent K02909 RP-L31; large subunit ribosomal protein L31
D GAPWK_2439 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D GAPWK_0294 LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D GAPWK_0452 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D GAPWK_1435 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D GAPWK_0161 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D GAPWK_0484 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D GAPWK_2820 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2865 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2861 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2814 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2816 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2868 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2810 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2864 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2813 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2819 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2866 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2862 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:gap03009]
D GAPWK_2014 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GAPWK_2460 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GAPWK_2013 GTP-binding protein Era K03595 era; GTPase
D GAPWK_0201 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D GAPWK_2501 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D GAPWK_1961 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GAPWK_2148 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D GAPWK_0387 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GAPWK_2172 Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D GAPWK_2318 Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GAPWK_2517 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GAPWK_0847 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D GAPWK_0706 16S rRNA (guanine(966)-N(2))-methyltransferase, SSU rRNA m(2)G966 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GAPWK_1803 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GAPWK_2808 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GAPWK_0488 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GAPWK_1796 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GAPWK_2171 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D GAPWK_2004 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GAPWK_2545 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D GAPWK_0683 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GAPWK_2429 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D GAPWK_0577 23S rRNA (guanine-N-2-) -methyltransferase rlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D GAPWK_0282 LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D GAPWK_2727 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GAPWK_2223 23S rRNA (Uracil-5-) -methyltransferase RumA, LSU rRNA m(5)U1939 K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GAPWK_1471 23S rRNA (Uracil-5-) -methyltransferase rumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D GAPWK_0332 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GAPWK_0971 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GAPWK_0334 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D GAPWK_0897 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GAPWK_0027 Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D GAPWK_2147 putative tRNA/rRNA methyltransferase yfiF K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D GAPWK_0845 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GAPWK_0363 Ribosomal-protein-L7p-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D GAPWK_0415 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D GAPWK_1662 Ribosomal protein S12p Asp88 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D GAPWK_1000 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D GAPWK_1899 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D GAPWK_2043 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D GAPWK_1921 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D GAPWK_2491 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D GAPWK_2051 Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GAPWK_1807 Putative Holliday junction resolvase YggF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GAPWK_2036 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GAPWK_1037 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D GAPWK_2459 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GAPWK_0212 GTP-binding protein EngA K03977 engA; GTPase
D GAPWK_0021 GTP-binding protein HflX K03665 hflX; GTPase
D GAPWK_0014 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GAPWK_0832 GTP pyrophosphokinase, (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GAPWK_1959 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D GAPWK_1962 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D GAPWK_0684 Iojap protein K09710 ybeB; ribosome-associated protein
D GAPWK_0682 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly K07042 ybeY; probable rRNA maturation factor
D GAPWK_2544 RNA binding protein K07574 yhbY; RNA-binding protein
D GAPWK_0827 Putative alpha helix protein K09889 yjgA; ribosome-associated protein
D GAPWK_2067 Ribosome hibernation protein YfiA K05809 raiA; ribosome-associated inhibitor A
D GAPWK_1797 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D GAPWK_2440 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:gap03016]
D GAPWK_1341 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D GAPWK_2026 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GAPWK_2626 Protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D GAPWK_0056 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GAPWK_0338 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GAPWK_0051 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GAPWK_0895 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GAPWK_2103 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GAPWK_0247 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GAPWK_0990 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GAPWK_0073 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GAPWK_2392 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GAPWK_0532 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GAPWK_2156 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GAPWK_1433 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GAPWK_0530 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GAPWK_2065 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GAPWK_1264 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GAPWK_0209 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GAPWK_1437 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GAPWK_1438 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GAPWK_0205 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GAPWK_2123 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GAPWK_2455 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D GAPWK_0758 YcfF/hinT protein: a purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GAPWK_2213 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GAPWK_2539 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D GAPWK_1955 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GAPWK_1958 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GAPWK_0670 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D GAPWK_0131 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GAPWK_0014 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GAPWK_0019 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GAPWK_2135 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GAPWK_2809 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GAPWK_0453 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GAPWK_1688 Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D GAPWK_1724 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D GAPWK_1985 Exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D GAPWK_1477 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D GAPWK_2132 RNA:NAD 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D GAPWK_0557 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D GAPWK_0327 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GAPWK_0326 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GAPWK_2502 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GAPWK_0324 Cys-tRNA(Pro) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D GAPWK_1052 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D GAPWK_1057 tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D GAPWK_1900 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GAPWK_2398 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D GAPWK_2806 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D GAPWK_1479 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D GAPWK_1480 tRNA (5-methoxyuridine) 34 synthase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D GAPWK_1045 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D GAPWK_1038 tRNA (Uracil54-C5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D GAPWK_0414 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GAPWK_2147 putative tRNA/rRNA methyltransferase yfiF K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D GAPWK_2066 tRNA:Cm32/Um32 methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D GAPWK_0449 tRNA (cytidine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GAPWK_1533 tRNA (adenine37-N(6))-methyltransferase TrmN6 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D GAPWK_1294 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D GAPWK_0332 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GAPWK_1819 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GAPWK_0887 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D GAPWK_0704 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GAPWK_0015 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D GAPWK_2749 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D GAPWK_2750 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D GAPWK_0666 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D GAPWK_0133 Iron binding protein IscA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D GAPWK_1012 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D GAPWK_0370 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D GAPWK_0853 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GAPWK_1851 Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GAPWK_1852 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GAPWK_0852 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GAPWK_1597 Protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D GAPWK_0368 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D GAPWK_0446 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GAPWK_0116 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GAPWK_1681 putative P-loop ATPase fused to an acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D GAPWK_0778 metal-dependent protease, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GAPWK_0998 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GAPWK_0016 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GAPWK_0383 CsdL protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D GAPWK_2005 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GAPWK_2038 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:gap03012]
D GAPWK_2349 Translation initiation factor SUI1-related protein K03113 EIF1; translation initiation factor 1
D GAPWK_1960 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D GAPWK_1434 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D GAPWK_0388 Glutathione-regulated potassium-efflux system ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GAPWK_2799 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D GAPWK_2570 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D GAPWK_0385 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D GAPWK_2569 Translation elongation factor G K02355 fusA; elongation factor G
D GAPWK_0963 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GAPWK_2797 Ribosome recycling factor K02838 frr; ribosome recycling factor
D GAPWK_0964 Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GAPWK_2211 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GAPWK_0891 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D GAPWK_0888 Translation elongation factor P-related protein K02356 efp; elongation factor P
D GAPWK_0450 Translation elongation factor P K02356 efp; elongation factor P
D GAPWK_1990 Translation elongation factor P Lys34:lysine transferase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D GAPWK_0451 Lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D GAPWK_0074 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GAPWK_0912 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:gap03110]
D GAPWK_1850 TssH/ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GAPWK_2330 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GAPWK_2082 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D GAPWK_1839 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D GAPWK_0062 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GAPWK_0135 Chaperone protein HscA K04044 hscA; molecular chaperone HscA
D GAPWK_0105 Chaperone protein hscC (Hsc62) K04045 hscC; molecular chaperone HscC
D GAPWK_2724 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GAPWK_0063 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GAPWK_2556 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D GAPWK_0134 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D GAPWK_2540 33 kDa chaperonin (Heat shock protein 33) (HSP33) K04083 hslO; molecular chaperone Hsp33
D GAPWK_2765 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D GAPWK_2541 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4) K04762 hslR; ribosome-associated heat shock protein Hsp15
D GAPWK_2723 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D GAPWK_2546 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GAPWK_0100 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GAPWK_0427 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D GAPWK_2550 Putative oxidoreductase component of anaerobic dehydrogenases; Chaperone protein TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D GAPWK_0967 Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D GAPWK_0124 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GAPWK_0782 Peptidyl-prolyl cis-trans isomerase PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D GAPWK_2328 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D GAPWK_2751 hypothetical protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D GAPWK_1055 FKBP-type peptidyl-prolyl cis-trans isomerase FklB K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D GAPWK_0169 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D GAPWK_2317 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D GAPWK_0262 Thioredoxin K03671 TXN; thioredoxin
D GAPWK_1474 Thioredoxin domain-containing protein EC-YbbN K05838 ybbN; putative thioredoxin
D GAPWK_0779 Glutaredoxin 1 K03674 grxA; glutaredoxin 1
D GAPWK_0357 Glutaredoxin 2 K03675 grxB; glutaredoxin 2
D GAPWK_1689 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D GAPWK_0044 Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GAPWK_0333 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D GAPWK_0345 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:gap04131]
D GAPWK_0857 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GAPWK_0824 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_1222 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_1794 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GAPWK_1454 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GAPWK_1839 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:gap04121]
C 03051 Proteasome [BR:gap03051]
D GAPWK_1839 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:gap03032]
D GAPWK_1463 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GAPWK_2630 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2646 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_0323 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D GAPWK_1439 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D GAPWK_0922 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D GAPWK_0233 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GAPWK_1954 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GAPWK_0461 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GAPWK_0929 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GAPWK_2432 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GAPWK_0232 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GAPWK_1260 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GAPWK_0893 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GAPWK_2354 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GAPWK_1462 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GAPWK_1624 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GAPWK_0846 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D GAPWK_2755 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GAPWK_0054 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GAPWK_1913 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GAPWK_2120 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D GAPWK_1831 SeqA protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D GAPWK_0001 Chromosomal replication initiator protein DnaA K10763 hda; DnaA-homolog protein
D GAPWK_0286 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GAPWK_0230 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GAPWK_2555 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GAPWK_2554 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GAPWK_1584 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GAPWK_1075 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:gap03036]
D GAPWK_2630 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2646 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2014 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GAPWK_0323 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D GAPWK_1439 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D GAPWK_0922 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D GAPWK_0127 Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D GAPWK_0233 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GAPWK_0285 Phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D GAPWK_0311 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D GAPWK_1901 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GAPWK_0020 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D GAPWK_0320 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D GAPWK_1574 Transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GAPWK_1718 Nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D GAPWK_2303 Chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D GAPWK_2304 Chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D GAPWK_2305 Chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D GAPWK_0500 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GAPWK_0667 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage K05589 ftsB; cell division protein FtsB
D GAPWK_0029 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GAPWK_0490 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GAPWK_2175 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GAPWK_0489 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D GAPWK_2453 putative cell division protein FtsN K03591 ftsN; cell division protein FtsN
D GAPWK_0499 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D GAPWK_0495 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D GAPWK_0030 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D GAPWK_0501 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GAPWK_1912 Cell division protein ZipA K03528 zipA; cell division protein ZipA
D GAPWK_1995 Z-ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D GAPWK_1815 Putative cytoplasmic protein K09892 zapB; cell division protein ZapB
D GAPWK_1893 hypothetical protein K18657 zapC; cell division protein ZapC
D GAPWK_0996 hypothetical protein K18778 zapD; cell division protein ZapD
D GAPWK_2807 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GAPWK_0017 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GAPWK_1911 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D GAPWK_1562 hypothetical protein K13053 sulA; cell division inhibitor SulA
D GAPWK_2781 Transcriptional regulator SlmA, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D GAPWK_1831 SeqA protein, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D GAPWK_2054 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D GAPWK_2053 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D GAPWK_2052 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D GAPWK_2802 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D GAPWK_2555 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GAPWK_2554 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GAPWK_2809 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GAPWK_2808 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GAPWK_0838 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D GAPWK_0346 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D GAPWK_2104 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GAPWK_0522 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:gap03400]
D GAPWK_1847 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GAPWK_0069 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GAPWK_2069 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GAPWK_0203 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GAPWK_2241 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GAPWK_2780 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GAPWK_1526 Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GAPWK_1241 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D GAPWK_2137 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GAPWK_2417 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GAPWK_0103 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GAPWK_1310 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GAPWK_1717 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GAPWK_1534 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D GAPWK_0344 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GAPWK_1913 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GAPWK_0054 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GAPWK_1290 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D GAPWK_0789 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D GAPWK_1415 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D GAPWK_0662 DNA polymerase III epsilon subunit K05984 cho; excinuclease Cho [EC:3.1.25.-]
D GAPWK_0840 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GAPWK_2445 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GAPWK_2444 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GAPWK_0165 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GAPWK_0831 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GAPWK_1554 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GAPWK_0821 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GAPWK_0018 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D GAPWK_0309 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D GAPWK_1423 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D GAPWK_0104 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GAPWK_1992 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GAPWK_2432 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GAPWK_0232 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GAPWK_1260 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GAPWK_0893 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GAPWK_2354 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GAPWK_1462 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GAPWK_1624 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GAPWK_0846 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D GAPWK_0929 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GAPWK_2120 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D GAPWK_2032 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GAPWK_0092 Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GAPWK_0675 Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GAPWK_0534 RecA protein K03553 recA; recombination protein RecA
D GAPWK_1622 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GAPWK_1621 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GAPWK_1909 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GAPWK_2326 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GAPWK_0756 hypothetical protein K02686 priB; primosomal replication protein N
D GAPWK_1617 Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
D GAPWK_0640 Superfamily I DNA and RNA helicase and helicase subunits K04067 priC; primosomal replication protein N''
D GAPWK_2507 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GAPWK_0231 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GAPWK_0833 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GAPWK_1429 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GAPWK_1292 Recombination protein RecR K06187 recR; recombination protein RecR
D GAPWK_2778 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GAPWK_0235 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D GAPWK_2357 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D GAPWK_1079 ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D GAPWK_0286 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GAPWK_0230 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GAPWK_1584 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GAPWK_0323 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D GAPWK_1901 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GAPWK_1439 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D GAPWK_0922 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D GAPWK_1627 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GAPWK_1733 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GAPWK_1349 Error-prone, lesion bypass DNA polymerase V (UmuC) K03502 umuC; DNA polymerase V
D GAPWK_1350 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D GAPWK_0993 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GAPWK_0533 Regulatory protein RecX K03565 recX; regulatory protein
D GAPWK_1058 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D GAPWK_0777 DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GAPWK_2267 Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GAPWK_2268 Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:gap03029]
D GAPWK_1960 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D GAPWK_1434 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D GAPWK_2799 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D GAPWK_2570 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D GAPWK_0385 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D GAPWK_2569 Translation elongation factor G K02355 fusA; elongation factor G
D GAPWK_2013 GTP-binding protein Era K03595 era; GTPase
D GAPWK_0205 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GAPWK_0895 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GAPWK_2392 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GAPWK_0990 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GAPWK_0929 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GAPWK_2335 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D GAPWK_0062 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GAPWK_2765 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D GAPWK_2724 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GAPWK_2723 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D GAPWK_0063 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GAPWK_0131 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GAPWK_0134 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D GAPWK_1689 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D GAPWK_2104 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GAPWK_0455 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GAPWK_1839 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:gap02000]
D GAPWK_0883 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GAPWK_1405 YbtP K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GAPWK_0884 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GAPWK_1406 YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GAPWK_0771 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GAPWK_0772 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GAPWK_2299 Putative secretion ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GAPWK_2075 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GAPWK_0685 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GAPWK_0686 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D GAPWK_0045 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D GAPWK_1469 ABC transporter-like K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D GAPWK_2109 ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein
D GAPWK_2655 Sulfate and thiosulfate binding protein CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D GAPWK_2654 Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D GAPWK_2653 Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D GAPWK_2652 Sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D GAPWK_0786 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D GAPWK_0785 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D GAPWK_0784 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GAPWK_0788 Putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D GAPWK_1737 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D GAPWK_1736 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D GAPWK_1735 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D GAPWK_1028 Putrescine ABC transporter putrescine-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D GAPWK_1031 Putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D GAPWK_1030 Putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D GAPWK_1029 Putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D GAPWK_1904 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D GAPWK_1905 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D GAPWK_1906 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GAPWK_2166 putative ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GAPWK_2165 putative ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GAPWK_2164 putative ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GAPWK_2167 putative ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D GAPWK_2168 Uncharacterized protein YrbB K07122 mlaB; phospholipid transport system transporter-binding protein
D GAPWK_1418 Arginine ABC transporter, periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D GAPWK_1416 Arginine ABC transporter, permease protein ArtM K09998 artM; arginine transport system permease protein
D GAPWK_1417 Arginine ABC transporter, permease protein ArtQ K09999 artQ; arginine transport system permease protein
D GAPWK_1419 Arginine ABC transporter, ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_0679 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D GAPWK_0677 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D GAPWK_0678 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D GAPWK_0676 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_2183 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GAPWK_2186 amino acid ABC transporter permease protein K10009 tcyB; L-cystine transport system permease protein
D GAPWK_2185 Cysteine ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_1308 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_1787 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_2160 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_2538 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GAPWK_1785 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D GAPWK_2163 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D GAPWK_2537 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D GAPWK_1786 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GAPWK_2162 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GAPWK_2536 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GAPWK_2526 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GAPWK_2527 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GAPWK_2528 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D GAPWK_2529 Methionine ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D GAPWK_2496 putative amino-acid ABC transporter binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D GAPWK_2497 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D GAPWK_2498 putative amino-acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D GAPWK_0859 putative periplasmic solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GAPWK_0860 ABC-type amino acid transport system, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D GAPWK_0874 Glutamate transport membrane-spanning protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D GAPWK_1513 putative amino acid transport protein (ABC superfamily, ATP_bind and membrane) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GAPWK_2490 Peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D GAPWK_2489 peptide ABC transporter, permease K19228 sapC; cationic peptide transport system permease protein
D GAPWK_2488 Peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D GAPWK_2487 Peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D GAPWK_1331 Nickel ABC transporter, periplasmic nickel-binding protein NikA K15584 nikA; nickel transport system substrate-binding protein
D GAPWK_1330 Nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein
D GAPWK_1329 Nickel transport system permease protein NikC K15586 nikC; nickel transport system permease protein
D GAPWK_1328 peptide ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D GAPWK_1327 oligopeptide ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D GAPWK_2369 ABC transporter, periplasmic substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GAPWK_2368 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D GAPWK_2367 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D GAPWK_2366 Putative ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GAPWK_1067 Periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D GAPWK_1071 Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D GAPWK_1072 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D GAPWK_0432 Iron compound ABC transporter, periplasmic iron compound-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D GAPWK_1661 Iron compound ABC uptake transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D GAPWK_0434 Petrobactin ABC transporter, permease protein II K25283 yclO; iron-siderophore transport system permease protein
D GAPWK_0433 hypothetical protein K25284 yclN; iron-siderophore transport system permease protein
D GAPWK_0435 putative iron ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D GAPWK_2420 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D GAPWK_2422 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D GAPWK_2421 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GAPWK_1950 Manganese ABC transporter, periplasmic-binding protein SitA K11604 sitA; manganese/iron transport system substrate-binding protein
D GAPWK_1952 Manganese ABC transporter, inner membrane permease protein SitC K11605 sitC; manganese/iron transport system permease protein
D GAPWK_1953 Manganese ABC transporter, inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D GAPWK_1951 Manganese ABC transporter, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein
D GAPWK_0087 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D GAPWK_1442 Capsular polysaccharide ABC transporter, permease protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein
D GAPWK_1441 Capsular polysaccharide export system inner membrane protein KpsE K10107 kpsE; capsular polysaccharide transport system permease protein
D GAPWK_1443 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D GAPWK_1258 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D GAPWK_1257 putative Permease K11720 lptG; lipopolysaccharide export system permease protein
D GAPWK_0549 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GAPWK_1551 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D GAPWK_1553 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D GAPWK_1552 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GAPWK_0030 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D GAPWK_0029 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GAPWK_1347 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D GAPWK_0189 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D GAPWK_2759 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D GAPWK_2760 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D GAPWK_2058 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D GAPWK_2059 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GAPWK_0568 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GAPWK_0569 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GAPWK_0572 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GAPWK_0224 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D GAPWK_0570 ABC transporter, ATP-binding protein, putative K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GAPWK_0573 lipoprotein releasing system, ATP-binding protein, putative K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GAPWK_0223 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GAPWK_0463 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D GAPWK_1092 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D GAPWK_1663 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K26939 norM; MATE family, multidrug efflux pump
D GAPWK_1326 DNA-damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump
D GAPWK_1598 Putative sugar transporter K26937 dinF; MATE family, multidrug efflux pump
D GAPWK_1719 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K26937 dinF; MATE family, multidrug efflux pump
D GAPWK_2011 Arabinose-proton symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D GAPWK_2561 D-xylose proton-symporter XylE K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D GAPWK_2216 Lactose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D GAPWK_2251 Sucrose permease, major facilitator superfamily K02532 lacY; MFS transporter, OHS family, lactose permease
D GAPWK_2784 Sucrose permease, major facilitator superfamily K02532 lacY; MFS transporter, OHS family, lactose permease
D GAPWK_0289 fucose/glucose/galactose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D GAPWK_1872 Putative transport protein K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D GAPWK_1879 Nucleoside permease NupG K11537 xapB; MFS transporter, NHS family, xanthosine permease
D GAPWK_0801 Xanthosine permease K11537 xapB; MFS transporter, NHS family, xanthosine permease
D GAPWK_0359 L-Proline/Glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D GAPWK_0899 L-Proline/Glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D GAPWK_2138 L-Proline/Glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D GAPWK_0542 Putative transport protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D GAPWK_0255 Oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D GAPWK_0391 D-glucarate permease K03535 gudP; MFS transporter, ACS family, glucarate transporter
D GAPWK_2209 Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D GAPWK_2261 Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D GAPWK_2485 putative glucarate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D GAPWK_1228 hypothetical protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D GAPWK_1229 putative MFS family transport protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D GAPWK_0423 Lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D GAPWK_0689 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GAPWK_0864 Tetracycline efflux protein TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D GAPWK_2173 MFS family multidrug transport protein, bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D GAPWK_2108 putative sugar efflux transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D GAPWK_2152 MFS superfamily export protein YceL K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D GAPWK_0653 Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D GAPWK_2134 putative transporter K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D GAPWK_1539 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D GAPWK_1875 membrane protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D GAPWK_1017 TsgA protein K06141 tsgA; MFS transporter, TsgA protein
D GAPWK_1780 Niacin transporter NiaP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D GAPWK_2478 Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GAPWK_1590 Phosphotransferase system HPr enzyme K02784 ptsH; phosphocarrier protein HPr
D GAPWK_0476 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D GAPWK_2477 PTS system, phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D GAPWK_0437 Fructose-specific phosphocarrier protein HPr / PTS system, fructose-specific IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D GAPWK_2479 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GAPWK_2748 PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D GAPWK_2178 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_1731 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_1841 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_2641 PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GAPWK_2619 PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D GAPWK_1508 PTS system, maltose and glucose-specific IIC component / PTS system, maltose and glucose-specific IIB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GAPWK_1588 PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GAPWK_2719 hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GAPWK_1587 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIC component / PTS system, mannose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_0439 PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_2717 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_0477 PTS system, tagatose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GAPWK_2718 PTS system, fructose-specific IIBC component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GAPWK_0593 PTS system, mannitol-specific IIB component / PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D GAPWK_0748 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GAPWK_0746 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GAPWK_0750 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D GAPWK_0314 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GAPWK_1665 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GAPWK_0313 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D GAPWK_1666 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D GAPWK_0312 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D GAPWK_1667 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D GAPWK_0515 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_2233 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0180 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_2663 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0375 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GAPWK_0516 Putative carbohydrate PTS system, IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2232 PTS system, galactitol-specific IIB component, putative K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2234 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0181 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_2661 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0376 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GAPWK_0182 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2660 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0377 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0517 Putative carbohydrate PTS system, IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2231 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_2235 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D GAPWK_0420 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GAPWK_0957 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_2742 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_1302 PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GAPWK_0955 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0419 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_1300 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D GAPWK_0418 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_1299 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D GAPWK_2737 PTS system, mannose-specific IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GAPWK_2738 PTS system, mannose-specific IIC component K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GAPWK_2739 PTS system, mannose-specific IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GAPWK_0308 PTS system, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D GAPWK_0307 PTS system, sorbose-specific IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D GAPWK_0306 PTS system, sorbose-specific IIC component K02814 sorA; sorbose PTS system EIIC component
D GAPWK_0305 PTS system, sorbose-specific IID component K02815 sorM; sorbose PTS system EIID component
D GAPWK_2403 Ascorbate-specific PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GAPWK_0366 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GAPWK_2001 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_2404 Ascorbate-specific PTS system, EIIC component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_0365 Putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GAPWK_0301 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_2000 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_0364 Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D GAPWK_1542 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase; DHA-specific IIA component K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GAPWK_0795 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D GAPWK_0400 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GAPWK_0881 Stringent starvation protein A K03599 sspA; stringent starvation protein A
D GAPWK_1529 Putative membrane protein precursor K07114 yfbK; Ca-activated chloride channel homolog
D GAPWK_0526 Formate efflux transporter K06212 focA; formate transporter
D GAPWK_0194 Nitrite transporter NirC K02598 nirC; nitrite transporter
D GAPWK_0805 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K22051 mscM; miniconductance mechanosensitive channel
D GAPWK_2782 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D GAPWK_2596 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D GAPWK_2597 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D GAPWK_2086 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D GAPWK_2085 Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D GAPWK_0930 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D GAPWK_1073 Magnesium and cobalt transport protein CorA K16074 zntB; zinc transporter
D GAPWK_1561 Protein crcB K06199 crcB; fluoride exporter
D GAPWK_2154 Outer membrane protein C precursor K14062 ompN; outer membrane protein N
D GAPWK_2030 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) K10124 bglH; carbohydrate-specific outer membrane porin
D GAPWK_0234 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D GAPWK_1033 TonB-dependent receptor; Outer membrane receptor for ferric enterobactin and colicins B, D K19611 fepA; ferric enterobactin receptor
D GAPWK_1660 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D GAPWK_1324 hemin receptor, outer membrane protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GAPWK_1003 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GAPWK_1470 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GAPWK_1066 TonB-dependent hemin, ferrichrome receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GAPWK_1492 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GAPWK_2413 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GAPWK_1403 Ferric vibriobactin receptor ViuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GAPWK_0605 Ferric vulnibactin receptor VuuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GAPWK_2099 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D GAPWK_1440 Capsular polysaccharide biosynthesis/export periplasmic protein WcbC K01991 wza; polysaccharide biosynthesis/export protein
D GAPWK_2335 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D GAPWK_0211 Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) K17713 bamB; outer membrane protein assembly factor BamB
D GAPWK_1684 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex K07287 bamC; outer membrane protein assembly factor BamC
D GAPWK_0896 putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) K05807 bamD; outer membrane protein assembly factor BamD
D GAPWK_1056 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex K06186 bamE; outer membrane protein assembly factor BamE
D GAPWK_1049 Uncharacterized protein YtfM precursor K07278 tamA; translocation and assembly module TamA
D GAPWK_1048 Uncharacterized protein YtfN K09800 tamB; translocation and assembly module TamB
D GAPWK_0004 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D GAPWK_0548 LptA, protein essential for LPS transport across the periplasm K09774 lptA; lipopolysaccharide export system protein LptA
D GAPWK_0547 Uncharacterized protein YrbK K11719 lptC; lipopolysaccharide export system protein LptC
D GAPWK_2316 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D GAPWK_0894 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) K03643 lptE; LPS-assembly lipoprotein
D GAPWK_0681 Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D GAPWK_1422 Antiholin-like protein LrgA K06518 cidA; holin-like protein
D GAPWK_0003 Putative transport protein K16210 togT; oligogalacturonide transporter
D GAPWK_0890 Lysine-specific permease K11733 lysP; lysine-specific permease
D GAPWK_2078 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D GAPWK_1556 Arginine permease RocE K16235 mmuP; S-methylmethionine transporter
D GAPWK_1532 Arginine/ornithine antiporter ArcD K03758 arcD; arginine:ornithine antiporter / lysine permease
D GAPWK_0409 Putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D GAPWK_0273 Cobalt-zinc-cadmium resistance protein K13283 fieF; ferrous-iron efflux pump FieF
D GAPWK_1910 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D GAPWK_1285 Ethidium bromide-methyl viologen resistance protein EmrE K03297 emrE; small multidrug resistance pump
D GAPWK_1034 hypothetical protein K18924 ykkC; paired small multidrug resistance pump
D GAPWK_1035 Quaternary ammonium compound-resistance protein SugE K18925 ykkD; paired small multidrug resistance pump
D GAPWK_1799 Putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D GAPWK_1722 Permease of the drug/metabolite transporter (DMT) superfamily K03298 TC.DME; drug/metabolite transporter, DME family
D GAPWK_2471 Integral membrane protein K11939 rhtA; inner membrane transporter RhtA
D GAPWK_0809 L-rhamnose-proton symporter K02856 rhaT; L-rhamnose-H+ transport protein
D GAPWK_0529 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D GAPWK_1836 High-affinity gluconate transporter GntT K06155 gntT; Gnt-I system high-affinity gluconate transporter
D GAPWK_0798 D-serine permease DsdX K13629 dsdX; D-serine transporter
D GAPWK_2518 Histidine permease YuiF K07084 yuiF; putative amino acid transporter
D GAPWK_0464 Low-affinity inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D GAPWK_1898 Pantothenate:Na+ symporter K14392 panF; sodium/pantothenate symporter
D GAPWK_0204 Proline/sodium symporter PutP, Propionate/sodium symporter K11928 putP; sodium/proline symporter
D GAPWK_0287 Proton/glutamate symport protein, Proton/aspartate symport protein K11102 gltP; proton glutamate symport protein
D GAPWK_0736 Sodium/dicarboxylate symporter K07862 sstT; serine/threonine transporter
D GAPWK_0870 Sodium/glutamate symport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D GAPWK_1428 Putative Na(+)/H(+) exchanger protein, CPA1 family precursor K24163 nhaK; monovalent cation/hydrogen antiporter
D GAPWK_2557 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D GAPWK_2124 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D GAPWK_0072 Uracil permease K02824 uraA; uracil permease
D GAPWK_2560 Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D GAPWK_0339 Serine transporter K03837 sdaC; serine transporter
D GAPWK_2457 Putative sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D GAPWK_2777 Manganese transport protein MntH K03322 mntH; manganese transport protein
D GAPWK_2407 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GAPWK_1336 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D GAPWK_1352 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D GAPWK_2270 hypothetical protein K24180 mleP; malate permease and related proteins
D GAPWK_0695 Transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D GAPWK_2116 Threonine efflux protein K05835 rhtC; threonine efflux protein
D GAPWK_1827 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D GAPWK_1826 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D GAPWK_1080 Putative permease PerM (YfgO) K03548 perM; putative permease
D GAPWK_0854 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D GAPWK_0928 Multiple antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D GAPWK_0412 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D GAPWK_0495 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D GAPWK_2725 putative membrane protein K23242 mntP; manganese efflux pump family protein
D GAPWK_0565 Putative high-affinity iron permease K07243 FTR; high-affinity iron transporter
D GAPWK_0566 Periplasmic protein p19 involved in high-affinity Fe2+ transport K07230 p19; periplasmic iron binding protein
D GAPWK_1973 Carbon starvation protein A K23676 btsT; pyruvate/proton symporter
D GAPWK_2473 hypothetical protein K03832 tonB; periplasmic protein TonB
D GAPWK_2415 18K peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D GAPWK_2084 Hemolysin-type calcium-binding region:RTX N-terminal domain K03646 tolA; colicin import membrane protein
D GAPWK_2416 tolB protein precursor K03641 tolB; TolB protein
D GAPWK_2553 Anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GAPWK_2552 Anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D GAPWK_2551 Anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D GAPWK_0654 Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D GAPWK_2300 Putative secretion permease K13408 cvaA; membrane fusion protein
D GAPWK_1911 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D GAPWK_0046 Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D GAPWK_0672 Ribosyl nicotinamide transporter, PnuC-like K03811 pnuC; nicotinamide mononucleotide transporter
D GAPWK_1676 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D GAPWK_1675 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D GAPWK_1674 hypothetical protein K10123 feoC; putative ferrous iron transport protein C
D GAPWK_2467 hypothetical protein K16348 ecnB; entericidin B
D GAPWK_0236 MltA-interacting protein MipA K07274 mipA; MipA family protein
C 02044 Secretion system [BR:gap02044]
D GAPWK_2099 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D GAPWK_2300 Putative secretion permease K13408 cvaA; membrane fusion protein
D GAPWK_2299 Putative secretion ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GAPWK_2726 Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D GAPWK_0936 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GAPWK_0727 flp operon protein B K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D GAPWK_0720 RcpC K02279 cpaB; pilus assembly protein CpaB
D GAPWK_0721 Flp pilus assembly protein, secretin CpaC K02280 cpaC; pilus assembly protein CpaC
D GAPWK_0722 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D GAPWK_0716 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D GAPWK_0717 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D GAPWK_0718 Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D GAPWK_0719 Flp pilus assembly protein TadD, contains TPR repeat K12512 tadD; tight adherence protein D
D GAPWK_0724 hypothetical protein K12514 tadF; tight adherence protein F
D GAPWK_0725 hypothetical protein K12515 tadG; tight adherence protein G
D GAPWK_0708 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0709 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0710 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0711 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0712 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0713 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0714 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0715 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_1980 Prepilin peptidase dependent protein A precursor K02679 ppdA; prepilin peptidase dependent protein A
D GAPWK_1981 Prepilin peptidase dependent protein B precursor K02680 ppdB; prepilin peptidase dependent protein B
D GAPWK_1983 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D GAPWK_1007 Type IV pilin PilA K02682 ppdD; prepilin peptidase dependent protein D
D GAPWK_1008 Type IV fimbrial assembly, ATPase PilB K02504 hofB; protein transport protein HofB
D GAPWK_1009 Type IV fimbrial assembly protein PilC K02505 hofC; protein transport protein HofC
D GAPWK_0702 Type IV pilus biogenesis protein PilQ K02507 hofQ; protein transport protein HofQ
D GAPWK_0934 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D GAPWK_2327 DNA uptake protein K02237 comEA; competence protein ComEA
D GAPWK_0923 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D GAPWK_2613 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GAPWK_2612 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GAPWK_2587 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GAPWK_2585 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D GAPWK_2584 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GAPWK_2579 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GAPWK_2578 Flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GAPWK_2577 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GAPWK_2576 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GAPWK_2575 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GAPWK_2709 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like K12055 K12055; chromosome partitioning related protein ParA
D GAPWK_2686 Type IV secretory pathway, VirD4 components K12071 traD; conjugal transfer pilus assembly protein TraD
D GAPWK_0345 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D GAPWK_1940 tssM K11891 impL; type VI secretion system protein ImpL
D GAPWK_1946 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D GAPWK_1947 tssK K11893 impJ; type VI secretion system protein ImpJ
D GAPWK_1937 tssG K11895 impH; type VI secretion system protein ImpH
D GAPWK_1938 tssF K11896 impG; type VI secretion system protein ImpG
D GAPWK_1948 tssC K11900 impC; type VI secretion system protein ImpC
D GAPWK_1949 tssB K11901 impB; type VI secretion system protein ImpB
D GAPWK_1944 tssD K11903 hcp; type VI secretion system secreted protein Hcp
D GAPWK_0986 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0900 TssI/VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1354 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0949 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0608 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0578 TssI/VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1853 TssI/VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0650 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1500 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_0355 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D GAPWK_1935 tssE K11905 K11905; type VI secretion system protein
D GAPWK_1936 tssJ K11906 vasD; type VI secretion system protein VasD
D GAPWK_1943 TssH/ClpB protein K11907 vasG; type VI secretion system protein VasG
D GAPWK_1939 tssA K11910 vasJ; type VI secretion system protein VasJ
D GAPWK_0222 PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D GAPWK_2240 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GAPWK_0427 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D GAPWK_2380 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D GAPWK_0386 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D GAPWK_2379 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D GAPWK_0445 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GAPWK_0160 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D GAPWK_2470 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GAPWK_0028 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D GAPWK_2381 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GAPWK_0455 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GAPWK_2143 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D GAPWK_2142 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D GAPWK_2141 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D GAPWK_2073 Twin-arginine translocation protein TatA K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins
C 02022 Two-component system [BR:gap02022]
D GAPWK_1527 Putative response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GAPWK_0244 Transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D GAPWK_0448 Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D GAPWK_0447 Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D GAPWK_0877 Sensor protein basS/pmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D GAPWK_0876 Transcriptional regulatory protein basR/pmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D GAPWK_1040 Osmosensitive K+ channel histidine kinase KdpD K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GAPWK_1039 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GAPWK_0245 Sensory histidine kinase in two-component regulatory system with RstA K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D GAPWK_2729 Putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D GAPWK_2730 Transcriptional regulatory protein cpxR K02483 K02483; two-component system, OmpR family, response regulator
D GAPWK_0197 Nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GAPWK_0196 Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GAPWK_2189 Sensor kinase CitA, DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D GAPWK_2188 Transcriptional regulatory protein CitB, DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D GAPWK_0506 Two-component sensor histidine kinase, malate K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D GAPWK_0505 two-component response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D GAPWK_1976 Autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D GAPWK_1975 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator
D GAPWK_0430 Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D GAPWK_0431 Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
C 02035 Bacterial motility proteins [BR:gap02035]
D GAPWK_2585 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D GAPWK_2584 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GAPWK_2583 Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D GAPWK_2578 Flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GAPWK_2577 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GAPWK_2576 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GAPWK_2575 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GAPWK_2613 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GAPWK_2612 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GAPWK_2586 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GAPWK_2580 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GAPWK_2579 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GAPWK_2587 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GAPWK_2601 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GAPWK_2609 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D GAPWK_2602 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D GAPWK_2581 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D GAPWK_2588 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GAPWK_2582 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D GAPWK_2608 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GAPWK_2607 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GAPWK_2606 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D GAPWK_2604 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D GAPWK_2603 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GAPWK_2600 Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D GAPWK_2605 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D GAPWK_2598 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GAPWK_2599 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D GAPWK_2611 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D GAPWK_2592 Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D GAPWK_2591 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D GAPWK_2590 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D GAPWK_2594 Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D GAPWK_2595 Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D GAPWK_2593 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D GAPWK_2596 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D GAPWK_2597 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D GAPWK_2183 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GAPWK_2610 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D GAPWK_0936 Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GAPWK_2726 Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D GAPWK_0708 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0709 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0710 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0711 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0712 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0713 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0714 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0715 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D GAPWK_0727 flp operon protein B K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D GAPWK_0720 RcpC K02279 cpaB; pilus assembly protein CpaB
D GAPWK_0721 Flp pilus assembly protein, secretin CpaC K02280 cpaC; pilus assembly protein CpaC
D GAPWK_0722 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D GAPWK_0716 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:gap04812]
D GAPWK_2054 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D GAPWK_0501 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GAPWK_0500 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:gap04147]
D GAPWK_1839 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D GAPWK_1021 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GAPWK_0824 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_1222 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GAPWK_2451 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GAPWK_1454 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GAPWK_0124 Peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GAPWK_1036 Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D GAPWK_2724 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GAPWK_0062 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GAPWK_2480 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GAPWK_1834 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GAPWK_2570 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D GAPWK_0385 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D GAPWK_0758 YcfF/hinT protein: a purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GAPWK_1933 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GAPWK_0463 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D GAPWK_0214 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GAPWK_1530 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GAPWK_1371 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GAPWK_1370 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GAPWK_1531 NG,NG-dimethylarginine dimethylaminohydrolase 1 K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D GAPWK_2219 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GAPWK_0429 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GAPWK_0459 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GAPWK_2659 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_0318 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GAPWK_2007 IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GAPWK_0948 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GAPWK_0485 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GAPWK_1816 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GAPWK_1794 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:gap02048]
D GAPWK_2357 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D GAPWK_2356 CRISPR-associated protein, Cas2 K09951 cas2; CRISPR-associated protein Cas2
D GAPWK_2370 CRISPR-associated helicase Cas3, protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D GAPWK_2362 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D GAPWK_2361 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D GAPWK_2360 CRISPR-associated protein, CT1975 family K19124 casC; CRISPR system Cascade subunit CasC
D GAPWK_2359 CRISPR-associated protein, Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D GAPWK_2358 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
D GAPWK_1729 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GAPWK_1728 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D GAPWK_1727 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GAPWK_2120 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D GAPWK_2630 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2646 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GAPWK_2666 Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal K01156 res; type III restriction enzyme [EC:3.1.21.5]
D GAPWK_2667 Type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GAPWK_1282 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D GAPWK_1152 hypothetical protein K19048 symE; toxic protein SymE
D GAPWK_1288 Protein yjgK K19334 tabA; biofilm protein TabA
D GAPWK_0501 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GAPWK_2054 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D GAPWK_2555 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GAPWK_2554 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GAPWK_0056 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GAPWK_0131 Cysteine desulfurase, IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:gap04090]
C 01504 Antimicrobial resistance genes [BR:gap01504]
D GAPWK_0864 Tetracycline efflux protein TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D GAPWK_0245 Sensory histidine kinase in two-component regulatory system with RstA K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D GAPWK_1040 Osmosensitive K+ channel histidine kinase KdpD K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D GAPWK_1039 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D GAPWK_2728 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GAPWK_0076 Vancomycin B-type resistance protein VanW K18346 vanW; vancomycin resistance protein VanW
D GAPWK_2272 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D GAPWK_1911 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D GAPWK_1910 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D GAPWK_2099 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D GAPWK_2134 putative transporter K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:gap00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:gap03100]
D GAPWK_2857 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GAPWK_2812 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GAPWK_2818 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GAPWK_2837 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2848 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2829 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2830 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GAPWK_2815 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GAPWK_2826 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GAPWK_2845 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GAPWK_2860 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GAPWK_2841 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GAPWK_2850 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GAPWK_2852 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GAPWK_2853 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GAPWK_2863 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GAPWK_2867 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GAPWK_2836 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2839 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2843 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2824 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GAPWK_2870 tRNA-His K14226 tRNA-His; tRNA His
D GAPWK_2811 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GAPWK_2817 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GAPWK_2838 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2844 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2846 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2851 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2854 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2827 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GAPWK_2840 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GAPWK_2833 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GAPWK_2858 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GAPWK_2842 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2849 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2872 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2855 tRNA-Met K14230 tRNA-Met; tRNA Met
D GAPWK_2869 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GAPWK_2821 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GAPWK_2871 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GAPWK_2832 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GAPWK_2856 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GAPWK_2831 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GAPWK_2822 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GAPWK_2825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GAPWK_2859 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GAPWK_2823 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GAPWK_2834 tRNA-Val K14237 tRNA-Val; tRNA Val
D GAPWK_2835 tRNA-Val K14237 tRNA-Val; tRNA Val
D GAPWK_2847 tRNA-Val K14237 tRNA-Val; tRNA Val
D GAPWK_2816 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2868 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2810 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2864 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GAPWK_2813 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2819 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2866 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2862 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GAPWK_2820 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2865 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2861 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GAPWK_2814 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GAPWK_0010 2-deoxy-D-gluconate 3-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D GAPWK_0734 oxidoreductase, aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D GAPWK_1305 putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D GAPWK_1312 putative transmembrane reductase oxidoreductase protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D GAPWK_2101 hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D GAPWK_2071 2,4-dienoyl-CoA reductase [NADPH] K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D GAPWK_1254 Peptide methionine sulfoxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D GAPWK_1256 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D GAPWK_2187 Glutathione S-transferase domain protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D GAPWK_1081 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GAPWK_2107 Thiol peroxidase, Tpx-type K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GAPWK_0639 Ribonucleotide reductase of class III (anaerobic), activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D GAPWK_0266 Ribonucleotide reductase of class III (anaerobic), activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D GAPWK_0528 Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D GAPWK_0617 Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D GAPWK_0671 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D GAPWK_0172 Tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D GAPWK_1068 Radical SAM family protein HutW, coproporphyrinogen III oxidase-like, oxygen-independent, associated with heme uptake K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D GAPWK_2791 Galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D GAPWK_0680 Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D GAPWK_1805 acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D GAPWK_2293 hypothetical protein K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D GAPWK_2495 Histone acetyltransferase HPA2-related acetyltransferase K24117 scmL; S-(2-succino)cysteine N-acetyltransferase [EC:2.3.1.-]
D GAPWK_0279 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GAPWK_0251 thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GAPWK_0478 Tagatose-1-phosphate kinase TagK K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D GAPWK_0886 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D GAPWK_2115 hypothetical protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D GAPWK_0242 alpha/beta hydrolase fold K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D GAPWK_0421 Carboxylesterase, type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D GAPWK_2087 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GAPWK_1298 putative protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GAPWK_0969 putative metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D GAPWK_2033 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D GAPWK_0091 Putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GAPWK_1920 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GAPWK_1984 Esterase ybfF K01175 ybfF; esterase [EC:3.1.-.-]
D GAPWK_1365 Fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D GAPWK_2250 hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D GAPWK_2716 Alpha-mannosidase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D GAPWK_2764 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GAPWK_2469 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D GAPWK_0885 Adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D GAPWK_0574 Maf/YceF/YhdE family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D GAPWK_1605 Low molecular weight protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D GAPWK_0907 Transaldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-]
D GAPWK_2484 Altronate hydrolase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D GAPWK_0342 NAD(P)HX epimerase / NAD(P)HX dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D GAPWK_0110 Cysteine desulfurase CsdA-CsdE, main protein CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D GAPWK_0811 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D GAPWK_2117 Arabinose 5-phosphate isomerase K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D GAPWK_0343 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D GAPWK_0599 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D GAPWK_1873 Lead; Copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D GAPWK_1077 Mg(2+) transport ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D GAPWK_2740 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K19504 gfrE; glucoselysine-6-phosphate deglycase
D GAPWK_2741 Putative glucosamine-fructose-6-phosphate aminotransferase K19510 gfrF; fructoselysine-6-phosphate deglycase
C 99982 Energy metabolism
D GAPWK_0803 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D GAPWK_1750 Protein fdrA K02381 fdrA; FdrA protein
D GAPWK_0132 Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D GAPWK_2092 Flavodoxin 1 K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D GAPWK_1680 Sulfate transporter, CysZ-type K06203 cysZ; CysZ protein
D GAPWK_0935 Hypothetical protein YggS, proline synthase K06997 yggS; PLP dependent protein
D GAPWK_2731 Putative inner membrane protein K26607 cyuA; putative L-cysteine desulfidase
C 99986 Glycan metabolism
D GAPWK_1918 Inner membrane protein yciS K08992 lapA; lipopolysaccharide assembly protein A
D GAPWK_1919 Heat shock (predicted periplasmic) protein YciM, precursor K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D GAPWK_1825 Uncharacterized protein EC-HemY K02498 hemY; HemY protein
D GAPWK_2144 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D GAPWK_1427 Putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D GAPWK_0040 Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D GAPWK_2411 Putative integral membrane efflux protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D GAPWK_0310 FMN reductase, NADPH-dependent K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D GAPWK_1567 hypothetical protein K15977 K15977; putative oxidoreductase
D GAPWK_1569 putative membrane protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GAPWK_0316 Glucitol operon activator protein K02466 gutM; glucitol operon activator protein
D GAPWK_0938 Cold shock protein CspA K03704 cspA; cold shock protein
D GAPWK_0825 Cold shock protein CspA K03704 cspA; cold shock protein
D GAPWK_0794 Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D GAPWK_1890 Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
D GAPWK_1346 ABC-type multidrug transport system, permease component K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D GAPWK_1453 Heat shock protein hslJ K03668 hslJ; heat shock protein HslJ
D GAPWK_2332 Cell division trigger factor K03545 tig; trigger factor
D GAPWK_2525 formate dehydrogenase formation protein FdhE K02380 fdhE; FdhE protein
D GAPWK_2248 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D GAPWK_2423 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein K07391 comM; magnesium chelatase family protein
D GAPWK_0693 OsmC/Ohr family protein K07397 yhfA; putative redox protein
D GAPWK_0126 NfuA Fe-S protein maturation K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D GAPWK_0168 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D GAPWK_1991 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D GAPWK_0558 putative ATP-dependent endonuclease of the OLD family, YbjD subgroup K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D GAPWK_0284 putative endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D GAPWK_0520 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D GAPWK_2763 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D GAPWK_2264 Holliday junction DNA helicase K07478 ycaJ; putative ATPase
D GAPWK_1275 DNA primase, phage-associated / Replicative helicase RepA K06919 K06919; putative DNA primase/helicase
D GAPWK_2286 DNA primase, phage-associated / Replicative helicase RepA K06919 K06919; putative DNA primase/helicase
D GAPWK_1764 Mobile element protein K07483 K07483; transposase
D GAPWK_1375 Mobile element protein K07483 K07483; transposase
D GAPWK_1411 transposase K07483 K07483; transposase
D GAPWK_1894 Mobile element protein K07483 K07483; transposase
D GAPWK_1449 Mobile element protein K07483 K07483; transposase
D GAPWK_2288 Mobile element protein K07483 K07483; transposase
D GAPWK_2291 Mobile element protein K07483 K07483; transposase
D GAPWK_0752 Mobile element protein K07483 K07483; transposase
D GAPWK_1239 Mobile element protein K07483 K07483; transposase
D GAPWK_2632 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1154 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1196 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1413 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1501 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1608 Mobile element protein K07497 K07497; putative transposase
D GAPWK_0753 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1609 hypothetical protein K07497 K07497; putative transposase
D GAPWK_2530 Mobile element protein K07497 K07497; putative transposase
D GAPWK_2531 IS1400 transposase A K07497 K07497; putative transposase
D GAPWK_1765 Mobile element protein K07497 K07497; putative transposase
D GAPWK_2633 IS1400 transposase A K07497 K07497; putative transposase
D GAPWK_1895 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1153 hypothetical protein K07497 K07497; putative transposase
D GAPWK_1197 hypothetical protein K07497 K07497; putative transposase
D GAPWK_1214 hypothetical protein K07497 K07497; putative transposase
D GAPWK_1215 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1238 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1376 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1412 hypothetical protein K07497 K07497; putative transposase
D GAPWK_2290 Mobile element protein K07497 K07497; putative transposase
D GAPWK_1502 hypothetical protein K07497 K07497; putative transposase
D GAPWK_1410 Mobile element protein K07497 K07497; putative transposase
D GAPWK_2287 Mobile element protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D GAPWK_1623 hypothetical protein co-occurring with RecR K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GAPWK_2277 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D GAPWK_0361 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GAPWK_1838 Sodium-dependent transporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D GAPWK_0090 Sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D GAPWK_2614 Cytosine/purine/uracil/thiamine/allantoin permease family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D GAPWK_1457 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D GAPWK_0603 putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D GAPWK_2094 Intracellular septation protein IspA K06190 ispZ; intracellular septation protein
D GAPWK_0328 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP K22719 envC; murein hydrolase activator
C 99993 Cell motility
D GAPWK_0759 Lipoprotein YcfM, part of a salvage pathway of unknown substrate K07337 K07337; penicillin-binding protein activator
D GAPWK_0260 DNA transformation protein TfoX K07343 tfoX; DNA transformation protein and related proteins
D GAPWK_2492 Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D GAPWK_2045 ProQ: influences osmotic activation of compatible solute ProP K03607 proQ; ProP effector
D GAPWK_0465 Universal stress protein A K06149 uspA; universal stress protein A
D GAPWK_0576 Universal stress protein G K14061 uspF; universal stress protein F
D GAPWK_0598 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D GAPWK_0373 ACT domain protein K07166 K07166; ACT domain-containing protein
D GAPWK_2804 Phosphate starvation-inducible ATPase PhoH with RNA binding motif K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D GAPWK_2027 SH3 domain protein K07184 ygiM; SH3 domain protein
D GAPWK_1978 UPF0234 protein YajQ K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D GAPWK_2263 Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D GAPWK_1522 outer membrane lipoprotein LolB precursor K02494 lolB; outer membrane lipoprotein LolB
D GAPWK_1741 Lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D GAPWK_1830 15kd peptidoglycan-associated outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D GAPWK_2334 Chaperone protein skp precursor K06142 hlpA; outer membrane protein
D GAPWK_1795 Lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D GAPWK_2037 Lipoprotein nlpI precursor K05803 nlpI; lipoprotein NlpI
D GAPWK_1445 Capsular polysaccharide export system protein KpsS K07265 kpsS; capsular polysaccharide export protein
D GAPWK_1444 Capsular polysaccharide export system protein KpsC K07266 kpsC; capsular polysaccharide export protein
D GAPWK_1265 Outer membrane protein W precursor K07275 ompW; outer membrane protein
D GAPWK_2081 AsmA protein K07289 asmA; AsmA protein
D GAPWK_1970 Putative activity regulator of membrane protease YbbK K07340 ybbJ; inner membrane protein
D GAPWK_1345 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D GAPWK_0190 Hypothetical UPF0194 membrane protein ybhG K01993 ABC-2.TX; HlyD family secretion protein
D GAPWK_2758 Membrane fusion component of tripartite multidrug resistance system K01993 ABC-2.TX; HlyD family secretion protein
C 99994 Others
D GAPWK_1988 Glucans biosynthesis protein G precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D GAPWK_2077 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D GAPWK_0841 Frataxin-like CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D GAPWK_1069 Putative heme iron utilization protein K07227 chuX; heme iron utilization protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GAPWK_2344 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D GAPWK_0536 Paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D GAPWK_0740 Cation transport regulator ChaB K06197 chaB; cation transport regulator
D GAPWK_0066 Pyruvate formate-lyase K06866 grcA; autonomous glycyl radical cofactor
D GAPWK_1083 putative iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D GAPWK_2454 Inner membrane protein YihY, formerly thought to be RNase BN K07058 K07058; membrane protein
D GAPWK_2722 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D GAPWK_0109 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE K02426 sufE; cysteine desulfuration protein SufE
D GAPWK_1820 a protein of unknown function perhaps involved in purine metabolism K07153 hflD; high frequency lysogenization protein
D GAPWK_0392 Glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein
D GAPWK_2296 LemA family protein K03744 lemA; LemA protein
D GAPWK_2442 LemA family protein K03744 lemA; LemA protein
D GAPWK_0167 SlyX K03745 slyX; SlyX protein
D GAPWK_2427 Protein sprT K02742 sprT; SprT protein
D GAPWK_2345 hypothetical protein K03749 dedD; DedD protein
D GAPWK_2119 DamX, an inner membrane protein involved in bile resistance K03112 damX; DamX protein
D GAPWK_1420 SanA protein K03748 sanA; SanA protein
D GAPWK_0535 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D GAPWK_0707 putative membrane protein K08993 yhhL; putative membrane protein
D GAPWK_2776 Putative membrane protein K08996 yagU; putative membrane protein
D GAPWK_2574 Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D GAPWK_2441 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D GAPWK_1315 Dienelactone hydrolase-related enzyme K06889 K06889; uncharacterized protein
D GAPWK_2322 Putative membrane protein K06890 K06890; uncharacterized protein
D GAPWK_1520 Putative oxidoreductase K06938 K06938; uncharacterized protein
D GAPWK_0889 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D GAPWK_2271 Metal-dependent phosphohydrolase, HD subdomain K06950 K06950; uncharacterized protein
D GAPWK_2464 Proton/sodium-glutamate symport protein K06956 K06956; uncharacterized protein
D GAPWK_0275 hypothetical protein K06975 K06975; uncharacterized protein
D GAPWK_0943 hydrolase of alkaline phosphatase superfamily K07014 K07014; uncharacterized protein
D GAPWK_2321 putative hydrolase K07014 K07014; uncharacterized protein
D GAPWK_0061 YaaH protein K07034 K07034; uncharacterized protein
D GAPWK_1870 YpfJ protein, zinc metalloprotease superfamily K07054 K07054; uncharacterized protein
D GAPWK_2041 Putative membrane protein YfcA K07090 K07090; uncharacterized protein
D GAPWK_0692 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D GAPWK_1478 Metallophosphoesterase K07098 K07098; uncharacterized protein
D GAPWK_2616 Rrf2-linked NADH-flavin reductase K07118 K07118; uncharacterized protein
D GAPWK_0283 LppC putative lipoprotein K07121 K07121; uncharacterized protein
D GAPWK_2102 oxidoreductase, short-chain dehydrogenase/reductase family K07124 K07124; uncharacterized protein
D GAPWK_0121 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D GAPWK_0123 hypothetical protein K07126 K07126; uncharacterized protein
D GAPWK_1809 hypothetical protein K07126 K07126; uncharacterized protein
D GAPWK_0697 hypothetical protein K07126 K07126; uncharacterized protein
D GAPWK_0698 hypothetical protein K07126 K07126; uncharacterized protein
D GAPWK_2388 hypothetical protein K07126 K07126; uncharacterized protein
D GAPWK_1720 hypothetical protein K07126 K07126; uncharacterized protein
D GAPWK_2514 hypothetical protein K07126 K07126; uncharacterized protein
D GAPWK_0561 putative Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D GAPWK_1892 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K07140 K07140; MOSC domain-containing protein
D GAPWK_0454 Protein YidD K08998 K08998; uncharacterized protein
D GAPWK_0374 hypothetical protein K09157 K09157; uncharacterized protein
D GAPWK_0216 putative lipoate regulatory protein YbeD K09158 K09158; uncharacterized protein
D GAPWK_0933 YcgN K09160 K09160; uncharacterized protein
D GAPWK_1460 hypothetical protein K09790 K09790; uncharacterized protein
D GAPWK_0925 hypothetical protein K09791 K09791; uncharacterized protein
D GAPWK_1078 hypothetical protein K09794 K09794; uncharacterized protein
D GAPWK_2352 putative periplasmic protein K09795 K09795; uncharacterized protein
D GAPWK_0329 putative divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D GAPWK_2246 UPF0125 protein yfjF K09801 K09801; uncharacterized protein
D GAPWK_2348 UPF0265 protein YeeX K09802 K09802; uncharacterized protein
D GAPWK_1022 hypothetical protein K09824 virK; uncharacterized protein
D GAPWK_0537 hypothetical protein K09857 K09857; uncharacterized protein
D GAPWK_1337 UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D GAPWK_0997 zinc-binding protein K09862 K09862; uncharacterized protein
D GAPWK_0322 Uncharacterized protein YjaG K09891 K09891; uncharacterized protein
D GAPWK_0849 Protein of unknown function DUF414 K09894 K09894; uncharacterized protein
D GAPWK_2475 Putative conserved exported protein precursor K09895 K09895; uncharacterized protein
D GAPWK_0043 Protein yihD K09896 K09896; uncharacterized protein
D GAPWK_2424 Protein yifE K09897 K09897; uncharacterized protein
D GAPWK_2340 hypothetical protein K09898 K09898; uncharacterized protein
D GAPWK_1616 hypothetical protein K09899 K09899; uncharacterized protein
D GAPWK_0932 hypothetical protein K09902 K09902; uncharacterized protein
D GAPWK_2202 putative membrane protein K09908 K09908; uncharacterized protein
D GAPWK_1585 hypothetical protein K09911 K09911; uncharacterized protein
D GAPWK_0837 Protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D GAPWK_2106 hypothetical protein K09922 K09922; uncharacterized protein
D GAPWK_1333 uncharacterized protein YggL K09923 K09923; uncharacterized protein
D GAPWK_0059 Putative uncharacterized protein ydbL, may be related to amine metabolism K09978 K09978; uncharacterized protein
D GAPWK_1789 hypothetical protein K09979 K09979; uncharacterized protein
D GAPWK_1065 hypothetical protein K09980 K09980; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024