+D GENES KO #

  KEGG Orthology (KO) - Candidatus Comchoanobacter bicostacola

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:gbac00010] D MMH89_04780 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MMH89_01130 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MMH89_01135 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00020 Citrate cycle (TCA cycle) [PATH:gbac00020] D MMH89_02025 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D MMH89_04260 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D MMH89_02860 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MMH89_01785 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D MMH89_01790 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_01800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MMH89_01795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MMH89_01775 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MMH89_01780 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MMH89_01615 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MMH89_02890 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MMH89_01130 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MMH89_01135 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:gbac00030] D MMH89_04665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MMH89_04635 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D MMH89_04780 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions C 00051 Fructose and mannose metabolism [PATH:gbac00051] D MMH89_04780 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00052 Galactose metabolism C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism C 00520 Amino sugar and nucleotide sugar metabolism C 00620 Pyruvate metabolism [PATH:gbac00620] D MMH89_01130 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MMH89_01135 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_03035 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D MMH89_02890 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MMH89_01615 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:gbac00630] D MMH89_02890 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MMH89_02025 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D MMH89_04260 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MMH89_03795 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:gbac00640] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_01795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MMH89_01800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:gbac00650] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MMH89_01775 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MMH89_01780 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] C 00660 C5-Branched dibasic acid metabolism D MMH89_01795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MMH89_01800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:gbac00190] D MMH89_01275 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D MMH89_01280 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D MMH89_01285 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D MMH89_01290 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D MMH89_01300 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D MMH89_01310 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D MMH89_01315 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D MMH89_01325 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D MMH89_01330 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D MMH89_01775 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MMH89_01780 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MMH89_04540 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D MMH89_04535 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D MMH89_04480 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D MMH89_00975 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D MMH89_00965 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D MMH89_00960 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D MMH89_04475 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D MMH89_00005 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MMH89_04885 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D MMH89_04810 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MMH89_04820 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MMH89_04815 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MMH89_04790 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MMH89_04795 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MMH89_03015 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:gbac00710] D MMH89_04780 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MMH89_04665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MMH89_04635 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D MMH89_03035 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D MMH89_02890 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:gbac00720] D MMH89_02890 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MMH89_01615 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MMH89_01775 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MMH89_01780 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MMH89_01800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MMH89_01795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MMH89_02860 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MMH89_04260 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] C 00680 Methane metabolism [PATH:gbac00680] D MMH89_03795 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MMH89_02890 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MMH89_04780 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism D MMH89_01620 acyl-CoA dehydrogenase family protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis D MMH89_02790 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:gbac00071] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism C 00564 Glycerophospholipid metabolism D MMH89_03780 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:gbac01040] D MMH89_00375 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:gbac00230] D MMH89_02735 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MMH89_02365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MMH89_02370 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MMH89_00920 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:gbac00240] D MMH89_00570 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D MMH89_02735 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MMH89_04610 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D MMH89_02365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MMH89_02370 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MMH89_02780 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D MMH89_04845 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MMH89_01375 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D MMH89_01730 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00260 Glycine, serine and threonine metabolism [PATH:gbac00260] D MMH89_03795 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00270 Cysteine and methionine metabolism [PATH:gbac00270] D MMH89_00365 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MMH89_02890 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:gbac00280] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis D MMH89_03775 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] C 00310 Lysine degradation [PATH:gbac00310] D MMH89_01790 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:gbac00380] D MMH89_01790 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gbac00400] D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:gbac00450] D MMH89_02915 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MMH89_04695 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D MMH89_03795 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism C 00480 Glutathione metabolism [PATH:gbac00480] D MMH89_02145 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D MMH89_02860 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis [PATH:gbac00550] D MMH89_00580 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MMH89_01415 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism D MMH89_00920 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism D MMH89_04060 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis C 00780 Biotin metabolism C 00785 Lipoic acid metabolism [PATH:gbac00785] D MMH89_01405 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D MMH89_01400 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_01130 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MMH89_01135 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MMH89_01785 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D MMH89_01790 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:gbac00790] D MMH89_00955 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] C 00670 One carbon pool by folate [PATH:gbac00670] D MMH89_00955 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MMH89_03795 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MMH89_01730 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:gbac00860] D MMH89_04480 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D MMH89_04475 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gbac00130] D MMH89_03165 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D MMH89_00555 NAD(P)H-dependent oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:gbac00900] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MMH89_00580 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D MMH89_04665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D MMH89_02790 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D MMH89_00365 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:gbac03020] D MMH89_03580 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MMH89_03575 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MMH89_03425 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MMH89_04245 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:gbac03010] D MMH89_02930 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MMH89_00560 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MMH89_03515 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MMH89_03460 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MMH89_03475 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MMH89_03550 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MMH89_03570 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MMH89_03440 ribosomal protein uS13 K02952 RP-S13; small subunit ribosomal protein S13 D MMH89_03480 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MMH89_01475 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MMH89_03320 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MMH89_03500 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MMH89_03525 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MMH89_03595 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MMH89_03530 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MMH89_03545 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MMH89_03540 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MMH89_03485 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MMH89_03585 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MMH89_03600 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MMH89_03885 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MMH89_03495 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MMH89_03455 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MMH89_03510 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MMH89_03420 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MMH89_03465 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MMH89_03335 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MMH89_02595 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MMH89_04020 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MMH89_03520 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MMH89_03535 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MMH89_03490 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MMH89_04015 bL27 family ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27 D MMH89_00405 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MMH89_02825 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MMH89_02800 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MMH89_00010 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MMH89_02600 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MMH89_03445 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MMH89_00990 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MMH89_01005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:gbac00970] D MMH89_02080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MMH89_03765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MMH89_01910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MMH89_00615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MMH89_01635 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MMH89_01840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MMH89_02280 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MMH89_00070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MMH89_02130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MMH89_02275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MMH89_03650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MMH89_03760 tRNA-His K14226 tRNA-His; tRNA His D MMH89_00995 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MMH89_02285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MMH89_03745 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MMH89_02710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MMH89_03920 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MMH89_01505 tRNA-Met K14230 tRNA-Met; tRNA Met D MMH89_04725 tRNA-Ile K14230 tRNA-Met; tRNA Met D MMH89_04745 tRNA-Met K14230 tRNA-Met; tRNA Met D MMH89_03020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MMH89_02555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MMH89_03770 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MMH89_00905 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MMH89_02255 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MMH89_02505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MMH89_00695 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MMH89_03645 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MMH89_03635 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MMH89_03655 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MMH89_02615 tRNA-Val K14237 tRNA-Val; tRNA Val D MMH89_01845 tRNA-Val K14237 tRNA-Val; tRNA Val D MMH89_03205 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D MMH89_02755 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MMH89_02760 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D MMH89_02530 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MMH89_04315 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MMH89_00300 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MMH89_02610 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MMH89_02900 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MMH89_04200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MMH89_04695 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MMH89_03365 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MMH89_03115 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MMH89_01575 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MMH89_03910 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MMH89_01515 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MMH89_01085 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MMH89_01815 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MMH89_02590 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MMH89_03830 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MMH89_00420 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:gbac03060] D MMH89_03450 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MMH89_01265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MMH89_00720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MMH89_03310 signal recognition particle receptor subunit alpha K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MMH89_00290 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system D MMH89_02865 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:gbac03018] D MMH89_01470 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MMH89_00270 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MMH89_00755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MMH89_03070 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MMH89_02110 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:gbac03030] D MMH89_03660 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MMH89_00605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MMH89_01355 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MMH89_01445 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MMH89_04265 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MMH89_03665 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MMH89_00600 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D MMH89_01165 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:gbac03410] D MMH89_04690 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MMH89_00610 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D MMH89_03135 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MMH89_01680 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MMH89_03940 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MMH89_02835 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MMH89_01165 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:gbac03420] D MMH89_04030 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D MMH89_01645 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D MMH89_00785 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MMH89_01165 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:gbac03430] D MMH89_03010 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MMH89_02985 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D MMH89_00785 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MMH89_02835 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MMH89_04265 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MMH89_00605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MMH89_01355 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MMH89_03660 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MMH89_01165 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:gbac03440] D MMH89_02835 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MMH89_04265 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MMH89_01460 recR; recombination mediator RecR K06187 recR; recombination protein RecR D MMH89_02995 recA; recombinase RecA K03553 recA; recombination protein RecA D MMH89_04295 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MMH89_04305 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MMH89_02340 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D MMH89_00605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MMH89_01355 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MMH89_03660 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:gbac02010] D MMH89_04360 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MMH89_04365 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MMH89_04370 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:gbac03070] D MMH89_01265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MMH89_03450 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MMH89_00720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MMH89_00290 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MMH89_03310 signal recognition particle receptor subunit alpha K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:gbac02020] D MMH89_02060 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D MMH89_02065 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D MMH89_04475 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D MMH89_00150 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MMH89_02260 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D MMH89_02510 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MMH89_04540 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D MMH89_04535 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D MMH89_00005 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MMH89_04885 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D MMH89_04540 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:gbac02024] D MMH89_02110 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D MMH89_02060 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D MMH89_02065 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D MMH89_01265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MMH89_03450 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MMH89_00720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MMH89_00290 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MMH89_03310 signal recognition particle receptor subunit alpha K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D MMH89_02705 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:gbac01000] C 01001 Protein kinases [BR:gbac01001] D MMH89_02060 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:gbac01009] D MMH89_04335 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:gbac01002] D MMH89_02145 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D MMH89_04400 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D MMH89_00520 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MMH89_03860 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D MMH89_01415 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MMH89_03735 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D MMH89_03725 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] C 01003 Glycosyltransferases C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:gbac01011] D MMH89_01415 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 01004 Lipid biosynthesis proteins [BR:gbac01004] D MMH89_00375 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:gbac01006] D MMH89_00580 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MMH89_04480 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:gbac01007] D MMH89_03205 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D MMH89_03830 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MMH89_00420 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MMH89_04200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MMH89_01515 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MMH89_04695 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MMH89_01575 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MMH89_03365 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MMH89_03115 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MMH89_03910 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MMH89_04315 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MMH89_01815 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MMH89_00300 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MMH89_02900 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MMH89_01085 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MMH89_02610 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MMH89_02530 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MMH89_02590 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MMH89_01640 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:gbac00194] D MMH89_04820 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MMH89_04815 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MMH89_04810 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MMH89_04795 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MMH89_04790 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:gbac03000] D MMH89_00280 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MMH89_04740 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D MMH89_03790 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:gbac03021] D MMH89_03425 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MMH89_03580 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MMH89_03575 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MMH89_04245 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MMH89_02705 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D MMH89_00295 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D MMH89_01495 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D MMH89_03785 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D MMH89_03605 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MMH89_03875 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D MMH89_03870 ClpXP protease specificity-enhancing factor SspB K03600 sspB; stringent starvation protein B D MMH89_04740 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D MMH89_00430 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D MMH89_00270 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:gbac03019] D MMH89_02205 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D MMH89_01470 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MMH89_00270 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MMH89_00755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MMH89_03070 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MMH89_02110 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D MMH89_02510 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:gbac03011] D MMH89_02930 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MMH89_00560 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MMH89_03515 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MMH89_03460 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MMH89_03475 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MMH89_03550 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MMH89_03570 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MMH89_03440 ribosomal protein uS13 K02952 RP-S13; small subunit ribosomal protein S13 D MMH89_03480 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MMH89_01475 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MMH89_03320 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MMH89_03500 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MMH89_03525 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MMH89_03595 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MMH89_03530 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MMH89_03545 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MMH89_03540 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MMH89_03485 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MMH89_03600 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MMH89_03585 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MMH89_03885 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MMH89_03495 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MMH89_03455 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MMH89_03510 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MMH89_03420 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MMH89_03465 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MMH89_03335 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MMH89_02595 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MMH89_04020 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MMH89_03520 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MMH89_03535 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MMH89_03490 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MMH89_04015 bL27 family ribosomal protein K02899 RP-L27; large subunit ribosomal protein L27 D MMH89_00405 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MMH89_02825 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MMH89_02800 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MMH89_00010 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MMH89_02600 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MMH89_03445 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MMH89_00990 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MMH89_01005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:gbac03009] D MMH89_02205 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D MMH89_04010 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D MMH89_04740 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D MMH89_01495 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D MMH89_03785 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D MMH89_03605 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MMH89_03285 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D MMH89_00515 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D MMH89_01995 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MMH89_03185 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MMH89_00140 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D MMH89_00105 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:gbac03016] D MMH89_01085 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MMH89_01575 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MMH89_03115 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MMH89_04695 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MMH89_01515 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MMH89_03910 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MMH89_04315 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MMH89_02530 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MMH89_00300 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MMH89_02610 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MMH89_02900 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MMH89_04200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MMH89_03365 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MMH89_01815 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MMH89_02590 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MMH89_03830 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MMH89_00420 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MMH89_00660 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MMH89_01200 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D MMH89_01230 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MMH89_01480 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D MMH89_00030 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MMH89_00040 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MMH89_04630 3'-5' exoribonuclease K03683 rnt; ribonuclease T [EC:3.1.13.-] D MMH89_04255 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D MMH89_03205 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D MMH89_03825 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D MMH89_02830 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D MMH89_03330 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D MMH89_02865 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MMH89_01665 tRNA-guanosine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D MMH89_01895 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D MMH89_02210 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D MMH89_01470 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:gbac03012] D MMH89_01490 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MMH89_02605 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MMH89_00565 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D MMH89_03555 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MMH89_03640 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MMH89_03560 fusA; elongation factor G K02355 fusA; elongation factor G D MMH89_04440 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D MMH89_00575 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D MMH89_02850 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D MMH89_04715 efp; elongation factor P K02356 efp; elongation factor P D MMH89_03915 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:gbac03110] D MMH89_02855 ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D MMH89_03730 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D MMH89_04335 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D MMH89_00755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MMH89_03070 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MMH89_00750 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D MMH89_03075 co-chaperone GroES K04078 groES; chaperonin GroES D MMH89_00520 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MMH89_04790 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MMH89_03750 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D MMH89_00275 trxA; thioredoxin K03671 TXN; thioredoxin D MMH89_02490 glutathione S-transferase N-terminal domain-containing protein K03676 grxC; glutaredoxin 3 D MMH89_00635 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:gbac04131] D MMH89_02735 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MMH89_04335 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:gbac03051] D MMH89_04335 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:gbac03032] D MMH89_03665 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MMH89_01850 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D MMH89_02565 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D MMH89_00150 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MMH89_01445 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MMH89_04265 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MMH89_00605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MMH89_03660 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MMH89_01355 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MMH89_00600 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D MMH89_01165 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MMH89_02950 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MMH89_00165 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MMH89_04870 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MMH89_04505 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MMH89_00950 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:gbac03036] D MMH89_01850 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D MMH89_02565 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D MMH89_00150 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MMH89_02110 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D MMH89_02905 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D MMH89_03250 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D MMH89_00940 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MMH89_02240 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D MMH89_02745 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D MMH89_02165 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D MMH89_00285 ParA family protein K03496 parA; chromosome partitioning protein D MMH89_00280 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MMH89_04870 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MMH89_04505 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MMH89_00040 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MMH89_04785 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:gbac03400] D MMH89_03855 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D MMH89_00610 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D MMH89_03135 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MMH89_04690 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MMH89_04845 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MMH89_01685 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D MMH89_01680 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MMH89_03940 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MMH89_02835 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MMH89_01165 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MMH89_04030 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D MMH89_01645 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D MMH89_00785 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MMH89_03580 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MMH89_03575 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MMH89_03425 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MMH89_04245 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MMH89_03010 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MMH89_02985 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D MMH89_00605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MMH89_03660 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MMH89_01355 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MMH89_04265 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MMH89_02340 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D MMH89_02995 recA; recombinase RecA K03553 recA; recombination protein RecA D MMH89_04295 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MMH89_04305 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MMH89_01460 recR; recombination mediator RecR K06187 recR; recombination protein RecR D MMH89_02950 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MMH89_00165 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MMH89_00950 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D MMH89_01850 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D MMH89_02565 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D MMH89_02365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MMH89_02370 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:gbac03029] D MMH89_04535 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D MMH89_01490 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MMH89_02605 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MMH89_00565 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D MMH89_03555 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MMH89_03640 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MMH89_03560 fusA; elongation factor G K02355 fusA; elongation factor G D MMH89_03830 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MMH89_03115 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MMH89_04315 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MMH89_00300 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MMH89_01515 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MMH89_02755 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MMH89_02760 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D MMH89_04265 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MMH89_00755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MMH89_03070 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MMH89_03075 co-chaperone GroES K04078 groES; chaperonin GroES D MMH89_00750 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D MMH89_00635 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D MMH89_04480 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D MMH89_04475 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D MMH89_04335 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:gbac02000] D MMH89_00925 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D MMH89_03720 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D MMH89_00335 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D MMH89_00340 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D MMH89_04360 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MMH89_04365 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MMH89_04370 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D MMH89_00125 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D MMH89_01945 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D MMH89_03980 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D MMH89_01145 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D MMH89_03875 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D MMH89_03155 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D MMH89_02090 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D MMH89_03250 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D MMH89_00815 tryptophan-rich sensory protein K05770 TSPO; translocator protein C 02044 Secretion system [BR:gbac02044] D MMH89_04170 dotB; Dot/Icm type IV secretion system ATPase DotB K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8] D MMH89_04070 type IV secretion protein IcmB K12206 icmB; intracellular multiplication protein IcmB [EC:7.2.4.8] D MMH89_04075 icmJ; type IVB secretion system protein IcmJDotN K12212 icmJ; intracellular multiplication protein IcmJ D MMH89_04110 DotH/IcmK family type IV secretion protein K12213 icmK; intracellular multiplication protein IcmK D MMH89_04120 type IVB secretion system apparatus protein IcmL/DotI K12214 icmL; intracellular multiplication protein IcmL D MMH89_04150 icmT; IcmT/TraK family protein K12222 icmT; intracellular multiplication protein IcmT D MMH89_00720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MMH89_01265 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MMH89_03450 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MMH89_03310 signal recognition particle receptor subunit alpha K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MMH89_00290 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor C 02042 Bacterial toxins C 02022 Two-component system [BR:gbac02022] D MMH89_02060 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D MMH89_02065 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D MMH89_02260 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:gbac04812] D MMH89_02745 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D MMH89_00940 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MMH89_02240 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D MMH89_00285 ParA family protein K03496 parA; chromosome partitioning protein D MMH89_00280 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:gbac04147] D MMH89_04335 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D MMH89_00510 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D MMH89_03070 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MMH89_00755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MMH89_03555 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MMH89_03640 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MMH89_00660 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MMH89_01530 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MMH89_00920 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D MMH89_01140 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MMH89_04390 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit C 02048 Prokaryotic defense system [BR:gbac02048] D MMH89_00940 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MMH89_02745 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D MMH89_04870 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MMH89_04505 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:gbac03100] D MMH89_02080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MMH89_03765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MMH89_01910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MMH89_00615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MMH89_01635 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MMH89_01840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MMH89_02280 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MMH89_00070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MMH89_02130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MMH89_02275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MMH89_03650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MMH89_03760 tRNA-His K14226 tRNA-His; tRNA His D MMH89_00995 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MMH89_02285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MMH89_03745 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MMH89_02710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MMH89_03920 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MMH89_01505 tRNA-Met K14230 tRNA-Met; tRNA Met D MMH89_04725 tRNA-Ile K14230 tRNA-Met; tRNA Met D MMH89_04745 tRNA-Met K14230 tRNA-Met; tRNA Met D MMH89_03020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MMH89_02555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MMH89_03770 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MMH89_00905 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MMH89_02255 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MMH89_02505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MMH89_00695 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MMH89_03645 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MMH89_03635 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MMH89_03655 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MMH89_02615 tRNA-Val K14237 tRNA-Val; tRNA Val D MMH89_01845 tRNA-Val K14237 tRNA-Val; tRNA Val D MMH89_00990 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MMH89_01005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MMH89_00650 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D MMH89_04380 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D MMH89_01935 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D MMH89_03715 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D MMH89_02100 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D MMH89_04405 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D MMH89_04850 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D MMH89_00620 ferredoxin family protein K05524 fdxA; ferredoxin D MMH89_04385 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D MMH89_00670 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D MMH89_03925 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D MMH89_01930 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D MMH89_04495 NTP/NDP exchange transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family D MMH89_04645 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D MMH89_01870 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D MMH89_00495 nucleoside recognition protein K06373 spmA; spore maturation protein A D MMH89_00490 spore maturation protein K06374 spmB; spore maturation protein B C 99993 Cell motility C 99995 Signaling proteins D MMH89_01520 typA; translational GTPase TypA K06207 typA; GTP-binding protein D MMH89_03820 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D MMH89_03985 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D MMH89_01755 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D MMH89_03865 LemA family protein K03744 lemA; LemA protein C 99997 Function unknown D MMH89_00020 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D MMH89_00655 Trm112 family protein K09791 K09791; uncharacterized protein D MMH89_00170 YaaA family protein K09861 K09861; uncharacterized protein D MMH89_04410 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024