+E Transcription factors KO #

  Transcription Factors - Gluconacetobacter diazotrophicus PA1 5 (Brazil)

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D GDI3776 DdeI; putative cytosine-specifi methyltransferase DdeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GDI3575 conserved hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D GDI1167 AraC; putative transcriptional regulator protein, AraC family K07506 K07506; AraC family transcriptional regulator D GDI1376 AraC; putative AraC-family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D GDI0470 ada; putative regulatory protein ada (Regulatory protein of adaptative response) K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D GDI2729 LysR; putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D GDI0269 putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D GDI0775 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D GDI0578 putative transcriptional Regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D GDI0601 putative transcriptional Regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D GDI1639 LysR; transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D GDI3785 LysR; putative transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D GDI1501 LysR; putative transcriptional Regulator, LysR family K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon C DeoR family D GDI1750 glpR; Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D GDI0350 putative transcriptional regulator protein, family lacI. K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GDI2661 fruR; putative fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D GDI0692 LacI; putative transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D GDI2474 transcriptional regulator, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D GDI2689 putative transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator C TetR/AcrR family D GDI1283 TetR; putative transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D GDI2777 putative transcription regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D GDI3795 putative transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor C Lrp/AsnC family D GDI2669 lrp; putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GDI0620 AsnC; putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GDI0615 AsnC; putative transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator C LuxR family C MarR family D GDI1601 putative transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D GDI3759 MarR; putative transcriptional regulator marR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin C MerR family C Fur family D GDI1398 fur; putative ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GDI1248 putative regulator protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family C CRP/FNR family D GDI1273 putative transcriptional activatory K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D GDI3487 putative regulatory protein K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator C Rrf2 family D GDI0494 putative transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D GDI3648 ArsR; putative transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family D GDI2447 putative transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator C PadR family D GDI1978 putative transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator C Other families D GDI0653 putative transcriptional regulator, mntR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D GDI3027 birA; putative biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D GDI2600 putative sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator D GDI0429 nifA; Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein D GDI0623 cdaR; putative carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D GDI0888 putative transcriptional regulator, LysR family K02019 modE; molybdate transport system regulatory protein D GDI0377 hypothetical protein K07726 K07726; putative transcriptional regulator D GDI1973 putative HTH-type transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D GDI2670 putA; putative bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D GDI1071 relB; putative RelB protein (antitoxin) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB B Other transcription factors C BglG family C Others D GDI1895 BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D GDI2883 parB; putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GDI0953 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GDI2813 putative ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GDI1225 parB; putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GDI2601 putative ParB-like nuclease protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GDI1850 Transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D GDI1379 hrcA; putative heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor D GDI2186 Thiaminase-2 protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D GDI3486 conserved hyothetical protein K07735 algH; putative transcriptional regulator D GDI3797 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D GDI1755 nrdR; putative transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR D GDI3182 mraZ; putative cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0