+E Transcription factors KO
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Transcription Factors - Gluconacetobacter diazotrophicus PA1 5 (Brazil)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D GDI3776 DdeI; putative cytosine-specifi methyltransferase DdeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GDI3575 conserved hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D GDI1167 AraC; putative transcriptional regulator protein, AraC family K07506 K07506; AraC family transcriptional regulator
D GDI1376 AraC; putative AraC-family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D GDI0470 ada; putative regulatory protein ada (Regulatory protein of adaptative response) K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D GDI2729 LysR; putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D GDI0269 putative transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D GDI0775 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D GDI0578 putative transcriptional Regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D GDI0601 putative transcriptional Regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D GDI1639 LysR; transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D GDI3785 LysR; putative transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D GDI1501 LysR; putative transcriptional Regulator, LysR family K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
C DeoR family
D GDI1750 glpR; Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
D GDI0350 putative transcriptional regulator protein, family lacI. K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GDI2661 fruR; putative fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D GDI0692 LacI; putative transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D GDI2474 transcriptional regulator, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D GDI2689 putative transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
C TetR/AcrR family
D GDI1283 TetR; putative transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D GDI2777 putative transcription regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D GDI3795 putative transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
C Lrp/AsnC family
D GDI2669 lrp; putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GDI0620 AsnC; putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GDI0615 AsnC; putative transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
C MarR family
D GDI1601 putative transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D GDI3759 MarR; putative transcriptional regulator marR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
C MerR family
C Fur family
D GDI1398 fur; putative ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GDI1248 putative regulator protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
C CRP/FNR family
D GDI1273 putative transcriptional activatory K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D GDI3487 putative regulatory protein K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
C Rrf2 family
D GDI0494 putative transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D GDI3648 ArsR; putative transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D GDI2447 putative transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
C PadR family
D GDI1978 putative transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
C Other families
D GDI0653 putative transcriptional regulator, mntR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D GDI3027 birA; putative biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GDI2600 putative sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator
D GDI0429 nifA; Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein
D GDI0623 cdaR; putative carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D GDI0888 putative transcriptional regulator, LysR family K02019 modE; molybdate transport system regulatory protein
D GDI0377 hypothetical protein K07726 K07726; putative transcriptional regulator
D GDI1973 putative HTH-type transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D GDI2670 putA; putative bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D GDI1071 relB; putative RelB protein (antitoxin) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
C Others
D GDI1895 BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D GDI2883 parB; putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GDI0953 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GDI2813 putative ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GDI1225 parB; putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GDI2601 putative ParB-like nuclease protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GDI1850 Transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D GDI1379 hrcA; putative heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D GDI2186 Thiaminase-2 protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D GDI3486 conserved hyothetical protein K07735 algH; putative transcriptional regulator
D GDI3797 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D GDI1755 nrdR; putative transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D GDI3182 mraZ; putative cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0