+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Geitlerinema sp. PCC 7407</h2>
%<!-- w=600, -->
!
A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
D      GEI7407_1882 CRISPR-associated HD domain protein	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] 
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
C    Subtype I-D factors
C    Subtype I-E factors
C    Subtype I-F factors
C    Subtype I-U factors
D      GEI7407_1880 CRISPR-associated protein, GSU0053 family	K19131 csb1; CRISPR-associated protein Csb1 
D      GEI7407_1879 CRISPR-associated protein, GSU0054	K19132 csb2; CRISPR-associated protein Csb2 
D      GEI7407_1881 hypothetical protein	K19136 csx17; CRISPR-associated protein Csx17 
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
#
A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
C    GEI7407_3463 Type I site-specific deoxyribonuclease	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] 
C    GEI7407_3465 restriction modification system DNA specificity domain protein	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] 
C    GEI7407_3464 Site-specific DNA-methyltransferase (adenine-specific)	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      GEI7407_1095 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      GEI7407_1634 DNA methylase N-4/N-6 domain protein	K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] 
B  Type III R-M system
B  Type IV R-M system
C    GEI7407_2629 HNH endonuclease	K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] 
C    GEI7407_2669 restriction endonuclease	K07448 mrr; restriction system protein 
#
A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
C    RelE/StbE-RelB/StbD
D      GEI7407_2457 hypothetical protein	K06218 relE; mRNA interferase RelE/StbE 
C    YafQ-dinJ
C    YoeB-YefM
D      GEI7407_3593 addiction module toxin, Txe/YoeB family	K19158 yoeB; toxin YoeB [EC:3.1.-.-] 
D      GEI7407_3594 prevent-host-death family protein	K19159 yefM; antitoxin YefM 
C    HipA-HipB
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
C    PspC-PspB
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
C    HigB-HigA
D      GEI7407_2007 Protein of unknown function DUF2136	K19166 higB; mRNA interferase HigB [EC:3.1.-.-] 
D      GEI7407_2008 transcriptional regulator, XRE family	K18831 higA; HTH-type transcriptional regulator / antitoxin HigA 
C    MqsR-MqsA
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
C    BC_0920-BC_0921
C    Type II TA system related factors
D      GEI7407_3760 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      GEI7407_1003 rod shape-determining protein MreB	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      GEI7407_0842 glutamyl-tRNA synthetase, glutamate--tRNA(Gln) ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
B  Type V TA system
C    GhoT-GhoS
#
A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    GEI7407_3431 Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
C    GEI7407_1047 aminotransferase class V	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: November 7, 2023