+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Geoalkalibacter halelectricus

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E L9S41_07600 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] E L9S41_01595 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] E L9S41_03230 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E L9S41_05255 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] E L9S41_06010 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] E L9S41_07700 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] E L9S41_06615 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Helicases E L9S41_15115 DEAD/DEAH box helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] E L9S41_15355 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E L9S41_06440 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E L9S41_10540 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E L9S41_08245 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E L9S41_08685 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho E L9S41_06410 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E L9S41_16830 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E L9S41_11530 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E L9S41_12300 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D Others E L9S41_05925 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E L9S41_03165 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E L9S41_09365 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E L9S41_11655 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator E L9S41_13780 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ E L9S41_06930 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024