+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Gordonia iterans
%
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ACRISPR-Cas system
B Universal Cas proteins
C C6V83_06685 CRISPR-associated endonuclease Cas4/Cas1 K15342 cas1; CRISP-associated protein Cas1
C C6V83_06690 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D C6V83_06675 cas3u; type I-U CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
D C6V83_06665 cas7u; type I-U CRISPR-associated protein Cas7 K19131 csb1; CRISPR-associated protein Csb1
D C6V83_06670 cas5u6u; type I-U CRISPR-associated protein Cas5/Cas6 K19132 csb2; CRISPR-associated protein Csb2
D C6V83_06680 CRISPR-associated protein K19133 csb3; CRISPR-associated protein Csb3
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C C6V83_08260 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C C6V83_08240 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D C6V83_01330 hypothetical protein K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D C6V83_05735 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D C6V83_00110 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C C6V83_05725 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C C6V83_14965 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
C C6V83_14970 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
D C6V83_11610 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D C6V83_04370 VapC toxin family PIN domain ribonuclease K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D C6V83_04375 hypothetical protein K19687 vapB; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D C6V83_03910 VapC toxin family PIN domain ribonuclease K07062 fitB; toxin FitB [EC:3.1.-.-]
C BC_0920-BC_0921
C Type II TA system related factors
D C6V83_12740 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D C6V83_02545 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D C6V83_14160 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C C6V83_14410 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023