+E Ribosome biogenesis KO
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Ribosome Biogenesis - Gekko japonicus (Schlegel's Japanese gecko)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 107122016 FBL; fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 107117631 NOP56; NOP56 ribonucleoprotein K14564 NOP56; nucleolar protein 56
D 107113316 NOP58; NOP58 ribonucleoprotein K14565 NOP58; nucleolar protein 58
D 107117165 SNU13; SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
C Box H/ACA snoRNPs
D 107118203 DKC1; dyskerin pseudouridine synthase 1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 107123204 GAR1; GAR1 ribonucleoprotein K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 107111526 NHP2; NHP2 ribonucleoprotein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D 107111742 NOP10; NOP10 ribonucleoprotein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D 107125672 NAF1; nuclear assembly factor 1 ribonucleoprotein K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D 107126019 SHQ1; SHQ1, H/ACA ribonucleoprotein assembly factor K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D 107125374 IMP3; IMP3, U3 small nucleolar ribonucleoprotein K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 107106078 IMP4; IMP4 homolog, U3 small nucleolar ribonucleoprotein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D 107117384 MPHOSPH10; M-phase phosphoprotein 10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D 107116202 NGDN; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D 107118379 RRP7A; ribosomal RNA processing 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7
D 107109220 PWP2; PWP2 periodic tryptophan protein homolog (yeast) K14558 PWP2; periodic tryptophan protein 2
D 107118343 NOP14; NOP14 nucleolar protein K14766 NOP14; nucleolar protein 14
D 107123772 UTP3; UTP3, small subunit processome component homolog (S. cerevisiae) K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 107106549 UTP4; UTP4, small subunit processome component K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D 107124487 WDR43; WD repeat domain 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D 107121721 UTP6; UTP6, small subunit processome component K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D 107115676 WDR46; WD repeat domain 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 107123640 HEATR1; HEAT repeat containing 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D 107110159 UTP11; UTP11, small subunit processome component homolog (S. cerevisiae) K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D 107111857 WDR3; WD repeat domain 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D 107125834 TBL3; transducin beta like 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D 107106066 UTP14A; UTP14A small subunit processome component K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D 107112456 UTP15; UTP15, small subunit processome component K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D 107117756 WD repeat-containing protein 75-like K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D 107118115 UTP18; UTP18, small subunit processome component K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 107116944 NOC4L; nucleolar complex associated 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D 107118905 UTP20; UTP20, small subunit processome component K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D 107117244 WDR36; WD repeat domain 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D 107124689 NOL6; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D 107105637 UTP23; UTP23, small subunit processome component K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D 107118327 FCF1; FCF1 rRNA-processing protein K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 107119278 DIEXF; digestive organ expansion factor homolog (zebrafish) K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D 107114069 RSL1D1; ribosomal L1 domain containing 1 K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D 107113981 DDX10; DEAD-box helicase 10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D 107106197 DDX18; DEAD-box helicase 18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 107118907 DDX47; DEAD-box helicase 47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D 107116983 DDX49; DEAD-box helicase 49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D 107121195 DDX52; DExD-box helicase 52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D 107115135 DHX15; DEAH-box helicase 15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 107125052 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 107118499 DHX37; DEAH-box helicase 37 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D 107114212 EIF4A3; eukaryotic translation initiation factor 4A3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D 107110647 BMS1; BMS1, ribosome biogenesis factor K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D 107108371 DROSHA; drosha ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D 107113560 REXO4; REX4 homolog, 3'-5' exonuclease K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 107122020 DBR1; debranching RNA lariats 1 K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D 107110674 casein kinase II subunit alpha-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 107114132 CSNK2A2; casein kinase 2 alpha 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 107115698 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 107109804 CSNK2B; casein kinase 2 beta K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D 107118215 AATF; apoptosis antagonizing transcription factor K14782 AATF; protein AATF/BFR2
D 107109892 CMSS1; cms1 ribosomal small subunit homolog (yeast) K14784 CMS1; protein CMS1
D 107116806 EMG1; EMG1, N1-specific pseudouridine methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D 107116234 ABT1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein
D 107117824 KRI1; KRI1 homolog K14786 KRI1; protein KRI1
D 107106502 KRR1; KRR1, small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein
D 107105883 RBM19; RNA binding motif protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D 107110135 NAT10; N-acetyltransferase 10 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D 107109944 NCL; nucleolin K11294 NCL; nucleolin
D 107122622 nucleolar protein 10-like K14788 NOL10; ribosome biogenesis protein ENP2
D 107117867 NOP9; NOP9 nucleolar protein K14790 NOP9; nucleolar protein 9
D 107117122 PINX1; PIN2/TERF1 interacting, telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1
D 107124195 PWP1; PWP1 homolog, endonuclein K14791 PWP1; periodic tryptophan protein 1
D 107107206 RCL1; RNA terminal phosphate cyclase like 1 K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D 107117917 PDCD11; programmed cell death 11 K14792 RRP5; rRNA biogenesis protein RRP5
D 107115938 RRP9; ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) K14793 RRP9; ribosomal RNA-processing protein 9
D 107114427 RRP12; ribosomal RNA processing 12 homolog K14794 RRP12; ribosomal RNA-processing protein 12
D 107123079 RRP36; ribosomal RNA processing 36 K14795 RRP36; ribosomal RNA-processing protein 36
D 107123369 treacle protein-like K14562 TCOF1; Treacher Collins syndrome protein
D 107107058 DDB1- and CUL4-associated factor 13-like K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D 107121266 RIOK1; RIO kinase 1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D 107107278 RIOK2; RIO kinase 2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D 107114791 DIMT1; DIM1 dimethyladenosine transferase 1 homolog K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D 107112420 WBSCR22; Williams-Beuren syndrome chromosome region 22 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D 107119682 METTL5; methyltransferase like 5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5
D 107119189 BYSL; bystin like K14797 ENP1; essential nuclear protein 1
D 107119500 LTV1; LTV1 ribosome biogenesis factor K14798 LTV1; protein LTV1
D 107106532 NOB1; NIN1/PSMD8 binding protein 1 homolog K11883 NOB1; RNA-binding protein NOB1
D 107108481 PNO1; partner of NOB1 homolog K11884 PNO1; RNA-binding protein PNO1
D 107116017 RAN; RAN, member RAS oncogene family K07936 RAN; GTP-binding nuclear protein Ran
D 107112783 AK6; adenylate kinase 6 K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 107119404 TSR1; TSR1, ribosome maturation factor K14799 TSR1; pre-rRNA-processing protein TSR1
D 107110671 TSR2; TSR2, ribosome maturation factor K14800 TSR2; pre-rRNA-processing protein TSR2
D 107106227 TSR3; TSR3, acp transferase ribosome maturation factor K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 107110326 PDCD2L; programmed cell death 2 like K14801 TSR4; pre-rRNA-processing protein TSR4
D 107113463 PDCD2; programmed cell death 2 K14801 TSR4; pre-rRNA-processing protein TSR4
D 107117149 RPS19BP1; ribosomal protein S19 binding protein 1 K26536 RPS19BP1; active regulator of SIRT1
D 107108413 XPO1; exportin 1 K14290 XPO1; exportin-1
D 107111471 KPNB1; karyopherin subunit beta 1 K14293 KPNB1; importin subunit beta-1
D 107112464 TNPO1; transportin 1 K18752 TNPO1; transportin-1
D 107115075 IPO4; importin 4 K20221 IPO4; importin-4
D 107113748 IPO5; importin 5 K20222 IPO5; importin-5
D 107109687 IPO7; importin 7 K20223 IPO7; importin-7
D 107107846 IPO9; importin 9 K20224 IPO9; importin-9
C Other pre-40S particles
D 107112573 ATP8A1; ATPase phospholipid transporting 8A1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 107112633 ATP8A2; ATPase phospholipid transporting 8A2 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 107116561 EIF3J; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J
D 107120266 ABCE1; ATP binding cassette subfamily E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D 107120926 DDX5; DEAD-box helicase 5 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 107106197 DDX18; DEAD-box helicase 18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 107105597 DDX21; DExD-box helicase 21 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
D 107114094 DDX24; DEAD-box helicase 24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D 107108036 DDX27; DEAD-box helicase 27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 107107268 DDX31; DEAD-box helicase 31 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D 107108538 DDX51; DEAD-box helicase 51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D 107122252 DDX54; DEAD-box helicase 54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D 107117213 DDX55; DEAD-box helicase 55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D 107118750 DDX56; DEAD-box helicase 56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D 107120509 SKIV2L2; Ski2 like RNA helicase 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D 107121765 GNL3; G protein nucleolar 3 K14538 NUG1; nuclear GTP-binding protein
D 107120839 GNL3L; G protein nucleolar 3 like K14538 NUG1; nuclear GTP-binding protein
D 107110169 GNL2; G protein nucleolar 2 K14537 NUG2; nuclear GTP-binding protein
D 107120491 GTPBP4; GTP binding protein 4 K06943 NOG1; nucleolar GTP-binding protein
D 107108765 LSG1; large 60S subunit nuclear export GTPase 1 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D 107107166 EFL1; elongation factor like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D 107116300 REXO2; RNA exonuclease 2 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 107125855 RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 107116255 RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 107114581 putative RNA exonuclease NEF-sp K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 107116814 REXO1; RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 107112361 XRN1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 107106120 XRN2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E 107105828 POP1; POP1 homolog, ribonuclease P/MRP subunit K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E 107112931 POP4; POP4 homolog, ribonuclease P/MRP subunit K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 107126102 POP5; POP5 homolog, ribonuclease P/MRP subunit K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E 107109531 RPP30; ribonuclease P/MRP subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E 107118097 POP7; POP7 homolog, ribonuclease P/MRP subunit K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
E 107109198 RPP25L; ribonuclease P/MRP subunit p25 like K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 107110654 RPP25; ribonuclease P/MRP subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 107120971 RPP38; ribonuclease P/MRP subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
E 107118472 RPP40; ribonuclease P/MRP subunit p40 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
D 107106148 NOL9; nucleolar protein 9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D 107123456 ABCF2; ATP binding cassette subfamily F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D 107107504 DNAJC21; DnaJ heat shock protein family (Hsp40) member C21 K09506 DNAJA5; DnaJ homolog subfamily A member 5
D 107107850 EIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D 107113195 heat shock 70 kDa protein 1-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 107113203 heat shock 70 kDa protein II-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 107106285 heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 107115689 heat shock cognate 71 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 107123537 heat shock 70 kDa protein K26598 HSPA2; heat shock 70kDa protein 2
D 107111623 MRTO4; MRT4 homolog, ribosome maturation factor K14815 MRT4; mRNA turnover protein 4
D 107107031 NMD3; NMD3 ribosome export adaptor K07562 NMD3; 60S ribosomal export protein NMD3
D 107115206 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
D 107114013 NXT2; nuclear transport factor 2 like export factor 2 K14285 NXT1_2; NTF2-related export protein 1/2
D 107116017 RAN; RAN, member RAS oncogene family K07936 RAN; GTP-binding nuclear protein Ran
D 107122733 ZNF622; zinc finger protein 622 K14816 REI1; pre-60S factor REI1
D 107112492 SBDS; SBDS ribosome assembly guanine nucleotide exchange factor K14574 SDO1; ribosome maturation protein SDO1
D 107109556 SPATA5; spermatogenesis associated 5 K14575 AFG2; AAA family ATPase
D 107124461 SPATA5L1; spermatogenesis associated 5 like 1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10]
D 107116618 CINP; cyclin dependent kinase 2 interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 107110161 chromosome unknown open reading frame, human C1orf109 K26053 C1ORF109; ribosome biogenesis protein C1orf109
D 107108413 XPO1; exportin 1 K14290 XPO1; exportin-1
D 107111471 KPNB1; karyopherin subunit beta 1 K14293 KPNB1; importin subunit beta-1
D 107112464 TNPO1; transportin 1 K18752 TNPO1; transportin-1
D 107115075 IPO4; importin 4 K20221 IPO4; importin-4
D 107113748 IPO5; importin 5 K20222 IPO5; importin-5
D 107109687 IPO7; importin 7 K20223 IPO7; importin-7
D 107107846 IPO9; importin 9 K20224 IPO9; importin-9
D 107111858 DUSP12; dual specificity phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D 107105536 TEX10; testis expressed 10 K14827 IPI1; pre-rRNA-processing protein IPI1
D 107116899 WDR18; WD repeat domain 18 K14829 IPI3; pre-rRNA-processing protein IPI3
D 107114221 LAS1L; LAS1 like, ribosome biogenesis factor K16912 LAS1; ribosomal biogenesis protein LAS1
D 107124409 PELP1; proline, glutamate and leucine rich protein 1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1
D 107118086 SENP3; SUMO1/sentrin/SMT3 specific peptidase 3 K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68]
C Ribosome quality control proteins
D 107120315 LTN1; listerin E3 ubiquitin protein ligase 1 K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D 107106538 TCF25; transcription factor 25 K24970 TCF25; transcription factor 25
D 107122504 NEMF; nuclear export mediator factor K24971 NEMF; nuclear export mediator factor NEMF
D 107106633 VCP; valosin containing protein K13525 VCP; transitional endoplasmic reticulum ATPase
D 107113821 transitional endoplasmic reticulum ATPase-like K13525 VCP; transitional endoplasmic reticulum ATPase
D 107108417 NPLOC4; NPL4 homolog, ubiquitin recognition factor K14015 NPLOC4; nuclear protein localization protein 4
D 107115246 UFD1L; ubiquitin fusion degradation 1 like (yeast) K14016 UFD1; ubiquitin fusion degradation protein 1
D 107108229 PTRHD1; peptidyl-tRNA hydrolase domain containing 1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29]
D 107122046 ANKZF1; ankyrin repeat and zinc finger domain containing 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D 107107505 BRIX1; BRX1, biogenesis of ribosomes K14820 BRX1; ribosome biogenesis protein BRX1
D 107110822 ZNF593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20
D 107110589 CCDC86; coiled-coil domain containing 86 K14822 CGR1; rRNA-processing protein CGR1
D 107106434 EBNA1BP2; EBNA1 binding protein 2 K14823 EBP2; rRNA-processing protein EBP2
D 107116575 BOP1; block of proliferation 1 K14824 ERB1; ribosome biogenesis protein ERB1
D 107112239 TMED5; transmembrane p24 trafficking protein 5 K14825 TMED5; p24 family protein gamma-2
D 107106161 PAK1IP1; PAK1 interacting protein 1 K14830 MAK11; protein MAK11
D 107115376 MAK16; MAK16 homolog K14831 MAK16; protein MAK16
D 107108060 CEBPZ; CCAAT/enhancer binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21
D 107106886 MDN1; midasin AAA ATPase 1 K14572 MDN1; midasin
D 107106556 NIP7; NIP7, nucleolar pre-rRNA processing protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D 107110831 NOC2L; NOC2 like nucleolar associated transcriptional repressor K14833 NOC2; nucleolar complex protein 2
D 107106477 NOC3L; NOC3 like DNA replication regulator K14834 NOC3; nucleolar complex protein 3
D 107118403 NOP2; NOP2 nucleolar protein K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D 107111970 RBM28; RNA binding motif protein 28 K14573 NOP4; nucleolar protein 4
D 107124141 NOL8; nucleolar protein 8 K14836 NOP8; nucleolar protein 8
D 107117665 RBM34; RNA binding motif protein 34 K14837 NOP12; nucleolar protein 12
D 107120611 NIFK; nucleolar protein interacting with the FHA domain of MKI67 K14838 NOP15; nucleolar protein 15
D 107116432 GLTSCR2; glioma tumor suppressor candidate region gene 2 K14840 NOP53; nucleolar protein 53
D 107115191 WDR74; WD repeat domain 74 K14841 NSA1; ribosome biogenesis protein NSA1
D 107118100 NSA2; NSA2, ribosome biogenesis homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 107105963 PES1; pescadillo ribosomal biogenesis factor 1 K14843 PES1; pescadillo
D 107122856 PUM3; pumilio RNA binding family member 3 K14844 PUF6; pumilio homology domain family member 6
D 107124195 PWP1; PWP1 homolog, endonuclein K14791 PWP1; periodic tryptophan protein 1
D 107105478 decapping and exoribonuclease protein-like K14845 RAI1; RAT1-interacting protein
D 107105477 decapping and exoribonuclease protein-like K14845 RAI1; RAT1-interacting protein
D 107111814 RIOX1; ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
D 107111980 RIOX2; ribosomal oxygenase 2 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66]
D 107121638 NVL; nuclear VCP-like K14571 RIX7; ribosome biogenesis ATPase
D 107117305 RPF1; ribosome production factor 1 homolog K14846 RPF1; ribosome production factor 1
D 107116762 RPF2; ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2
D 107113123 GRWD1; glutamate rich WD repeat containing 1 K14848 RRB1; ribosome assembly protein RRB1
D 107109204 RRP1B; ribosomal RNA processing 1B K14849 RRP1; ribosomal RNA-processing protein 1
D 107116954 RRP8; ribosomal RNA processing 8, methyltransferase, homolog (yeast) K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D 107114427 RRP12; ribosomal RNA processing 12 homolog K14794 RRP12; ribosomal RNA-processing protein 12
D 107105936 NOL12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17
D 107108571 RRS1; ribosome biogenesis regulator homolog K14852 RRS1; regulator of ribosome biosynthesis
D 107111224 NLE1; notchless homolog 1 K14855 RSA4; ribosome assembly protein 4
D 107123768 SDAD1; SDA1 domain containing 1 K14856 SDA1; protein SDA1
D 107125659 FTSJ3; FtsJ homolog 3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D 107118512 suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D 107112830 TMA16; translation machinery associated 16 homolog K14860 TMA16; translation machinery-associated protein 16
D 107114105 URB1; URB1 ribosome biogenesis 1 homolog (S. cerevisiae) K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D 107119015 URB2; URB2 ribosome biogenesis 2 homolog (S. cerevisiae) K14862 URB2; nucleolar pre-ribosomal-associated protein 2
D 107107249 WDR12; WD repeat domain 12 K14863 WDR12; ribosome biogenesis protein
D 107121016 NUFIP1; NUFIP1, FMR1 interacting protein 1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1
D 107108935 ZNHIT3; zinc finger HIT-type containing 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C 107119222 BCCIP; BRCA2 and CDKN1A interacting protein K15262 BCP1; protein BCP1
C 107118808 LYAR; Ly1 antibody reactive K15263 LYER; cell growth-regulating nucleolar protein
C 107119479 NSUN4; NOP2/Sun RNA methyltransferase family member 4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
C 107112422 NSUN5; NOP2/Sun RNA methyltransferase family member 5 K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 107114196 TFB1M; transcription factor B1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 107108934 MRM1; mitochondrial rRNA methyltransferase 1 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
C 107114026 BMT2; base methyltransferase of 25S rRNA 2 homolog K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C 107124030 MRM3; mitochondrial rRNA methyltransferase 3 K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-]
C 107115129 ZCCHC4; zinc finger CCHC-type containing 4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-]
C 107105789 DDX28; DEAD-box helicase 28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
C 107107702 DHX33; DEAH-box helicase 33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C 107111795 IGHMBP2; immunoglobulin mu binding protein 2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
C 107126075 ISG20L2; interferon stimulated exonuclease gene 20 like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-]
C 107106235 KDM8; lysine demethylase 8 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
C 107115645 PHF6; PHD finger protein 6 K23310 PHF6; PHD finger protein 6
C 107119405 ERAL1; Era like 12S mitochondrial rRNA chaperone 1 K03595 era; GTPase
C 107124182 chromosome unknown open reading frame, human C12orf45 K26142 NOPCHAP1; NOP protein chaperone 1
C 107108276 PA2G4; proliferation-associated 2G4 K26736 PA2G4; ERBB-3 binding protein
C 107106984 MTG1; mitochondrial ribosome associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1
C 107106053 MTG2; mitochondrial ribosome associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
C 107106780 NOA1; nitric oxide associated 1 K19832 NOA1; nitric oxide-associated protein 1
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 107117631 NOP56; NOP56 ribonucleoprotein K14564 NOP56; nucleolar protein 56
D 107119150 RPL7A; ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D 107118203 DKC1; dyskerin pseudouridine synthase 1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 107111742 NOP10; NOP10 ribonucleoprotein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D 107119569 MRM2; mitochondrial rRNA methyltransferase 2 K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C 107108371 DROSHA; drosha ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C 107119405 ERAL1; Era like 12S mitochondrial rRNA chaperone 1 K03595 era; GTPase
C 107106053 MTG2; mitochondrial ribosome associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C 107110154 YRDC; yrdC N6-threonylcarbamoyltransferase domain containing K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024