+E Transcription factors KO
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Transcription Factors - Gloeocapsa sp. PCC 7428
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D Glo7428_0137 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Glo7428_2555 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Glo7428_4065 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Glo7428_3338 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D Glo7428_3368 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Glo7428_0093 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Glo7428_0173 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Glo7428_4700 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Glo7428_2397 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Glo7428_1825 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_1922 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_0880 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_0938 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_4060 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_3920 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_0081 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_3531 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_3843 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Glo7428_4001 Ada DNA repair protein and transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Glo7428_1703 methylated-DNA/protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D Glo7428_0663 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
C DeoR family
D Glo7428_4354 transcriptional regulator K09012 sufR; DeoR family transcriptional regulator, suf operon transcriptional repressor
C LacI family
C GntR family
D Glo7428_4950 transcriptional regulator, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D Glo7428_3091 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Glo7428_0444 transcriptional regulator, GntR family K07978 plmA; GntR family transcriptional regulator
C TetR/AcrR family
D Glo7428_3845 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Glo7428_4540 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Glo7428_3525 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D Glo7428_0140 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Glo7428_1074 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Glo7428_1583 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Glo7428_1589 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
C Lrp/AsnC family
D Glo7428_4087 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
C LuxR family
C MarR family
D Glo7428_4661 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
C MerR family
D Glo7428_0794 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Glo7428_3905 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Glo7428_5116 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
C Fur family
D Glo7428_2003 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Glo7428_2744 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Glo7428_2376 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
C CRP/FNR family
D Glo7428_0251 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Glo7428_4619 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Glo7428_2212 transcriptional regulator, Crp/Fnr family K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
C Rrf2 family
C ArsR family
D Glo7428_1887 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Glo7428_2735 Clp domain protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Glo7428_3137 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Glo7428_4413 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Glo7428_5080 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
C PadR family
D Glo7428_3387 transcriptional regulator, PadR family K26743 pex; PadR family transcriptional regulator, circadian period extender
C Other families
D Glo7428_1910 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Glo7428_3062 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Glo7428_3985 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator
D Glo7428_2089 helix-turn-helix domain protein K07726 K07726; putative transcriptional regulator
D Glo7428_4105 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Glo7428_2141 helix-turn-helix domain protein K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D Glo7428_3933 delta-1-pyrroline-5-carboxylate dehydrogenase; L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D Glo7428_4120 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Glo7428_1500 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Glo7428_4918 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Glo7428_5127 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Glo7428_3926 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Glo7428_1010 thiaminase;4-amino-5-aminomethyl-2-methylpyrimidine deaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Glo7428_0202 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Glo7428_4062 negative transcriptional regulator, PaiB family K07734 paiB; transcriptional regulator
D Glo7428_2061 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0