+E Transcription factors KO #

  Transcription Factors - Gloeocapsa sp. PCC 7428

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D Glo7428_0137 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Glo7428_2555 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Glo7428_4065 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Glo7428_3338 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D Glo7428_3368 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D Glo7428_0093 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D Glo7428_0173 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D Glo7428_4700 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D Glo7428_2397 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D Glo7428_1825 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_1922 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_0880 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_0938 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_4060 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_3920 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_0081 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_3531 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_3843 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Glo7428_4001 Ada DNA repair protein and transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Glo7428_1703 methylated-DNA/protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D Glo7428_0663 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator C DeoR family D Glo7428_4354 transcriptional regulator K09012 sufR; DeoR family transcriptional regulator, suf operon transcriptional repressor C LacI family C GntR family D Glo7428_4950 transcriptional regulator, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D Glo7428_3091 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Glo7428_0444 transcriptional regulator, GntR family K07978 plmA; GntR family transcriptional regulator C TetR/AcrR family D Glo7428_3845 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Glo7428_4540 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Glo7428_3525 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D Glo7428_0140 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Glo7428_1074 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Glo7428_1583 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Glo7428_1589 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon C Lrp/AsnC family D Glo7428_4087 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA C LuxR family C MarR family D Glo7428_4661 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor C MerR family D Glo7428_0794 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Glo7428_3905 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Glo7428_5116 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA C Fur family D Glo7428_2003 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Glo7428_2744 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Glo7428_2376 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D Glo7428_0251 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Glo7428_4619 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Glo7428_2212 transcriptional regulator, Crp/Fnr family K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator C Rrf2 family C ArsR family D Glo7428_1887 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Glo7428_2735 Clp domain protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D Glo7428_3137 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Glo7428_4413 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Glo7428_5080 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family C PadR family D Glo7428_3387 transcriptional regulator, PadR family K26743 pex; PadR family transcriptional regulator, circadian period extender C Other families D Glo7428_1910 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Glo7428_3062 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Glo7428_3985 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator D Glo7428_2089 helix-turn-helix domain protein K07726 K07726; putative transcriptional regulator D Glo7428_4105 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator D Glo7428_2141 helix-turn-helix domain protein K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D Glo7428_3933 delta-1-pyrroline-5-carboxylate dehydrogenase; L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D Glo7428_4120 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Glo7428_1500 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Glo7428_4918 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Glo7428_5127 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Glo7428_3926 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Glo7428_1010 thiaminase;4-amino-5-aminomethyl-2-methylpyrimidine deaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D Glo7428_0202 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Glo7428_4062 negative transcriptional regulator, PaiB family K07734 paiB; transcriptional regulator D Glo7428_2061 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0