+F Repair protein KO #

  DNA Repair and Recombination Proteins - Gloeomargarita lithophora

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D GlitD10_1002 phrB-1; DNA photolyase, FAD-binding K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GlitD10_2726 phrB-2; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GlitD10_2729 phrB-3; deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E GlitD10_1161 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E GlitD10_2265 Endonuclease III/Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D GlitD10_0600 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D GlitD10_1002 phrB-1; DNA photolyase, FAD-binding K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GlitD10_2726 phrB-2; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GlitD10_2729 phrB-3; deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GlitD10_0535 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] C BER (base exicision repair) D DNA glycosylases E GlitD10_0508 dpo; DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E GlitD10_2680 alkA; HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E GlitD10_1161 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E GlitD10_2636 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E GlitD10_2265 Endonuclease III/Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E GlitD10_1880 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] E GlitD10_1548 nfi; endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] D RecJ E GlitD10_0140 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E GlitD10_1146 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E GlitD10_1074 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E GlitD10_0166 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E GlitD10_2597 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E GlitD10_2678 pcrA; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E GlitD10_1146 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F GlitD10_2297 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F GlitD10_2295 rpoC-1; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F GlitD10_2296 rpoC-2; DNA-directed RNA polymerase, gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F GlitD10_2082 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F GlitD10_2863 rpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F GlitD10_0863 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E GlitD10_0025 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E GlitD10_1774 mutS2; recombination and DNA strand exchange inhibitor protein K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E GlitD10_1317 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme E GlitD10_1647 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E GlitD10_1662 dnaN; DNA polymerase IF1 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E GlitD10_0254 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E GlitD10_1262 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E GlitD10_1543 dnaX; DNA polymerase III s gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E GlitD10_1146 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E GlitD10_2678 pcrA; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E GlitD10_2411 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein E GlitD10_2951 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E GlitD10_0733 dam-1; adenine-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] E GlitD10_0968 dam-2; D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] E GlitD10_1599 dam-3; putative adenine specific methyl transferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E GlitD10_1604 recA; recombinase A K03553 recA; recombination protein RecA E GlitD10_0407 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E GlitD10_1208 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E GlitD10_2874 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E GlitD10_1864 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E GlitD10_1814 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E GlitD10_0700 sbcD; nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E GlitD10_1604 recA; recombinase A K03553 recA; recombination protein RecA E GlitD10_2273 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E GlitD10_0942 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF E GlitD10_1701 recG-1; DNA recombinase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E GlitD10_2471 recG-2; putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E GlitD10_0140 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E GlitD10_2866 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E GlitD10_2405 recR; recombination protein RecR K06187 recR; recombination protein RecR E GlitD10_0407 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E GlitD10_1208 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E GlitD10_2874 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor E GlitD10_0184 cas1-1; CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1 E GlitD10_0623 cas1-2; CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1 E GlitD10_0643 cas1-3; CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1 E GlitD10_1356 cas1-4; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 E GlitD10_2157 CRISPR-associated protein Cas1, putative K15342 cas1; CRISP-associated protein Cas1 D Archaeal homologous recombinant proteins E GlitD10_1814 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E GlitD10_0700 sbcD; nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F GlitD10_1105 gyrA-1; DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F GlitD10_2550 gyrA-2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F GlitD10_2595 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F GlitD10_2052 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F GlitD10_0141 hupB-1; nucleoid protein hbs K03530 hupB; DNA-binding protein HU-beta F GlitD10_2508 hupB-2; nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F GlitD10_0140 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F GlitD10_2866 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F GlitD10_2405 recR; recombination protein RecR K06187 recR; recombination protein RecR F GlitD10_1146 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F GlitD10_0074 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F GlitD10_1074 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F GlitD10_0166 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors D GlitD10_1604 recA; recombinase A K03553 recA; recombination protein RecA D GlitD10_2411 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein D GlitD10_2951 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D GlitD10_1194 dinG; Rad3-related DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C Modulation of nucleotide pools D GlitD10_0600 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025