+D GENES KO
#
KEGG Orthology (KO) - Gordonibacter pamelaeae
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:gpa00010]
D GPA_11670 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GPA_09350 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GPA_30600 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D GPA_30690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GPA_05070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GPA_16250 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GPA_05820 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_21630 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GPA_28800 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GPA_06890 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00020 Citrate cycle (TCA cycle) [PATH:gpa00020]
D GPA_12090 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GPA_30180 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GPA_30360 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GPA_28800 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GPA_28790 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D GPA_28830 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D GPA_31300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_21630 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:gpa00030]
D GPA_11670 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GPA_17970 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D GPA_00770 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GPA_32690 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GPA_16510 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GPA_17990 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D GPA_25520 Aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D GPA_30690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GPA_30600 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D GPA_09350 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:gpa00040]
D GPA_17490 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GPA_08430 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00051 Fructose and mannose metabolism [PATH:gpa00051]
D GPA_09350 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GPA_30600 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D GPA_30690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GPA_32690 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:gpa00052]
D GPA_08430 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GPA_04770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GPA_09350 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:gpa00053]
D GPA_17490 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:gpa00500]
D GPA_08430 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GPA_11670 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:gpa00520]
D GPA_21740 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D GPA_24990 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GPA_31730 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GPA_21700 N-acyl-D-glucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D GPA_01100 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GPA_20950 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GPA_20960 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D GPA_08430 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GPA_17490 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GPA_04770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GPA_11670 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:gpa00620]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_21630 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GPA_28800 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GPA_25920 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GPA_07900 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_25930 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_06890 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GPA_25000 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GPA_09210 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GPA_07910 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D GPA_31300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GPA_05820 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GPA_02180 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GPA_10710 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:gpa00630]
D GPA_31300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GPA_12090 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GPA_30180 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GPA_11750 Catalase K03781 katE; catalase [EC:1.11.1.6]
D GPA_16850 Lactate dehydrogenase and related dehydrogenases K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GPA_13700 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GPA_02120 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_10780 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_32680 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GPA_32880 Anaerobic dehydrogenases, typically selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GPA_32890 Uncharacterized anaerobic dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GPA_32900 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D GPA_32910 Cytochrome b subunit of formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:gpa00640]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_25920 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GPA_07900 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_25930 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_06890 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:gpa00650]
D GPA_26020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_21630 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GPA_28800 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GPA_02220 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:gpa00660]
D GPA_02220 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GPA_09760 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GPA_09750 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
C 00562 Inositol phosphate metabolism
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:gpa00190]
D GPA_11610 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GPA_11600 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GPA_32580 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GPA_32590 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GPA_32570 ATP synthase, F1 epsilon subunit (delta in mitochondria) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GPA_32620 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GPA_33930 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D GPA_07930 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:gpa00710]
D GPA_05070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GPA_30690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GPA_30600 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D GPA_00770 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GPA_32690 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GPA_05820 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GPA_31300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:gpa00720]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_21630 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D GPA_05820 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GPA_31300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GPA_28800 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GPA_28790 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D GPA_28830 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D GPA_30360 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GPA_30180 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GPA_25920 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GPA_07900 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_25930 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_15570 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GPA_07170 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00680 Methane metabolism [PATH:gpa00680]
D GPA_32880 Anaerobic dehydrogenases, typically selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GPA_32890 Uncharacterized anaerobic dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GPA_32900 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D GPA_32910 Cytochrome b subunit of formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
D GPA_32680 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GPA_16850 Lactate dehydrogenase and related dehydrogenases K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GPA_16250 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GPA_31300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GPA_30690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GPA_30600 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D GPA_09350 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_02770 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GPA_02260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GPA_06850 phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:gpa00910]
D GPA_09200 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GPA_08510 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D GPA_17780 Nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH
D GPA_26440 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D GPA_05320 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GPA_02120 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_10780 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_02920 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D GPA_10470 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:gpa00920]
D GPA_10830 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D GPA_10840 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D GPA_19330 Fe-S-cluster-containing hydrogenase components 1 K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D GPA_16670 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D GPA_16680 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D GPA_16760 Nitrate reductase gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D GPA_16770 Fe-S oxidoreductase K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D GPA_16780 hypothetical protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D GPA_16790 Fe-S-cluster-containing hydrogenase components 1 K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D GPA_33080 Anaerobic dehydrogenases, typically selenocysteine-containing K08357 ttrA; tetrathionate reductase subunit A
D GPA_02470 Fe-S-cluster-containing hydrogenase components 1 K08358 ttrB; tetrathionate reductase subunit B
D GPA_25490 Anaerobic dehydrogenases, typically selenocysteine-containing K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GPA_07240 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GPA_11030 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D GPA_32280 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_18040 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_17880 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_13960 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_18140 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_10040 Fe-S-cluster-containing hydrogenase components 1 K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D GPA_18150 Fe-S-cluster-containing hydrogenase components 1 K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D GPA_17890 Fe-S-cluster-containing hydrogenase components 1 K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D GPA_18160 Polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D GPA_32300 Polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D GPA_17900 Polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:gpa00061]
D GPA_25920 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GPA_07900 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_25930 biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GPA_22320 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
D GPA_22260 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:gpa00121]
D GPA_01510 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K22604 E1.1.1.52; 3alpha-hydroxycholanate dehydrogenase (NAD+) [EC:1.1.1.52]
D GPA_22420 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K22606 E1.1.1.391; 3beta-hydroxycholanate 3-dehydrogenase (NAD+) [EC:1.1.1.391]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:gpa00561]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_30710 Dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D GPA_30700 Dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D GPA_06570 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GPA_22340 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:gpa00564]
D GPA_06560 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GPA_06570 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GPA_22340 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GPA_08000 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GPA_04240 Phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:gpa00230]
D GPA_16510 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GPA_07030 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GPA_12450 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GPA_20380 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GPA_12260 phosphoribosylaminoimidazole carboxylase, PurE protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D GPA_11350 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GPA_11400 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GPA_27650 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D GPA_02400 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GPA_23150 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GPA_31180 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GPA_09340 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GPA_16880 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GPA_05670 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D GPA_29010 dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D GPA_09220 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GPA_15190 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D GPA_18400 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D GPA_26340 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D GPA_12460 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GPA_21760 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GPA_02920 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:gpa00240]
D GPA_33210 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GPA_33020 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GPA_18480 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GPA_08030 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GPA_23150 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GPA_15300 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GPA_02130 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GPA_27650 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D GPA_32670 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GPA_33010 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GPA_09340 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GPA_16880 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GPA_32660 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GPA_03760 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GPA_31450 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:gpa00250]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_32370 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GPA_21350 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GPA_00950 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GPA_12460 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GPA_11400 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GPA_33020 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GPA_26020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D GPA_05320 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GPA_02120 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_10780 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_33210 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GPA_24990 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GPA_07030 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:gpa00260]
D GPA_09120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GPA_09110 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GPA_06850 phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D GPA_25750 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D GPA_32680 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GPA_16850 Lactate dehydrogenase and related dehydrogenases K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GPA_02770 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GPA_02260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GPA_26090 N-Dimethylarginine dimethylaminohydrolase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D GPA_29360 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:gpa00270]
D GPA_07240 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GPA_23830 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GPA_19980 Cytosine deaminase and related metal-dependent hydrolases K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D GPA_15720 Cytosine deaminase and related metal-dependent hydrolases K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D GPA_29540 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GPA_09120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GPA_09110 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GPA_11030 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D GPA_10990 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GPA_10720 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GPA_01210 Gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_06890 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GPA_31300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GPA_02770 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GPA_02260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:gpa00280]
D GPA_10720 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:gpa00290]
D GPA_09760 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GPA_09750 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GPA_02220 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GPA_10720 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GPA_02180 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GPA_10710 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:gpa00300]
D GPA_09120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GPA_09110 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GPA_03480 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GPA_21690 Dihydrodipicolinate synthase/N-acetylneuraminate lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GPA_10100 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GPA_02110 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GPA_11170 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GPA_11850 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
C 00310 Lysine degradation
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:gpa00220]
D GPA_02930 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GPA_00950 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GPA_02940 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D GPA_02120 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_10780 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_33210 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GPA_02920 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D GPA_05320 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_00990 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
C 00330 Arginine and proline metabolism [PATH:gpa00330]
D GPA_26090 N-Dimethylarginine dimethylaminohydrolase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D GPA_08130 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_11950 Predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GPA_00590 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_01450 Proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:gpa00340]
D GPA_18270 phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D GPA_31870 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D GPA_31930 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GPA_06400 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D GPA_07450 histidine decarboxylase, pyruvoyl type K01590 hdc; histidine decarboxylase [EC:4.1.1.22]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:gpa00350]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_31930 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GPA_04320 Zn-dependent alcohol dehydrogenases, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:gpa00360]
D GPA_10380 Coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GPA_12220 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_31930 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GPA_04320 Zn-dependent alcohol dehydrogenases, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D GPA_11950 Predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:gpa00380]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_11950 Predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GPA_11750 Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gpa00400]
D GPA_33770 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GPA_17300 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D GPA_14070 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GPA_29360 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_31930 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:gpa00410]
D GPA_26020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00430 Taurine and hypotaurine metabolism [PATH:gpa00430]
D GPA_26020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
C 00440 Phosphonate and phosphinate metabolism [PATH:gpa00440]
D GPA_26160 ABC-type phosphonate transport system, ATPase component K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D GPA_26200 Uncharacterized enzyme of phosphonate metabolism K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:gpa00450]
D GPA_29750 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D GPA_02440 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GPA_23980 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GPA_08710 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D GPA_32680 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:gpa00470]
D GPA_11840 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_12890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_20920 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_05210 D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GPA_03040 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GPA_26740 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D GPA_11170 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GPA_01450 Proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00480 Glutathione metabolism [PATH:gpa00480]
D GPA_25960 Uncharacterized proteins, homologs of lactam utilization protein B K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D GPA_01210 Gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GPA_30360 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:gpa00541]
D GPA_08430 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GPA_04770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GPA_17490 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GPA_01100 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GPA_20950 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GPA_20960 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:gpa00550]
D GPA_31730 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GPA_11840 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_12890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_20920 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_21170 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GPA_00920 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GPA_00900 Membrane carboxypeptidase (penicillin-binding protein) K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D GPA_27550 Predicted glutamine amidotransferase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D GPA_07680 Transglycosylase. K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
C 00552 Teichoic acid biosynthesis [PATH:gpa00552]
D GPA_05210 D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GPA_05220 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
D GPA_05200 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) K03740 dltD; D-alanine transfer protein
D GPA_13730 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D GPA_27540 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D GPA_00400 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:gpa00543]
D GPA_25410 Glycosyltransferases, probably involved in cell wall biogenesis K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D GPA_07240 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:gpa00730]
D GPA_20570 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D GPA_20540 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D GPA_33370 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GPA_20590 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D GPA_21760 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism [PATH:gpa00750]
D GPA_11930 Pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D GPA_02260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GPA_31680 pyridoxal phosphate synthase yaaD subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:gpa00760]
D GPA_02400 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GPA_27650 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D GPA_15790 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D GPA_10580 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
C 00770 Pantothenate and CoA biosynthesis [PATH:gpa00770]
D GPA_02220 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GPA_15510 pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D GPA_06300 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GPA_07720 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GPA_10720 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:gpa00780]
D GPA_22260 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GPA_08990 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:gpa00790]
D GPA_27440 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D GPA_06370 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GPA_29860 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GPA_24840 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GPA_24830 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GPA_16290 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GPA_16280 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GPA_11240 Molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GPA_17830 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:gpa00670]
D GPA_15570 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GPA_32680 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GPA_20380 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GPA_31450 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D GPA_07170 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GPA_12170 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:gpa00860]
D GPA_16600 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D GPA_16640 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GPA_16630 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GPA_34130 Uroporphyrinogen-III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GPA_16730 siroheme synthase, N-terminal domain K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D GPA_20660 Predicted Fe-S oxidoreductases K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D GPA_01640 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D GPA_01660 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D GPA_01680 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D GPA_01670 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D GPA_01810 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D GPA_01800 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GPA_32860 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GPA_01750 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D GPA_24810 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gpa00130]
D GPA_27200 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D GPA_07290 uncharacterized domain 1 K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:gpa00900]
D GPA_07230 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D GPA_07220 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D GPA_15200 farnesyl-diphosphate synthase/geranylgeranyl-diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GPA_00770 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
D GPA_00590 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
C 00261 Monobactam biosynthesis [PATH:gpa00261]
D GPA_09120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GPA_09110 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GPA_03480 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GPA_21690 Dihydrodipicolinate synthase/N-acetylneuraminate lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GPA_10100 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:gpa00401]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_31930 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GPA_22320 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D GPA_23830 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D GPA_11950 Predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:gpa00625]
D GPA_08070 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_02080 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GPA_17780 Nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH
D GPA_15450 2-haloalkanoic acid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D GPA_15450 2-haloalkanoic acid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
D GPA_04320 Zn-dependent alcohol dehydrogenases, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:gpa00622]
D GPA_04320 Zn-dependent alcohol dehydrogenases, class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00633 Nitrotoluene degradation [PATH:gpa00633]
D GPA_23420 hydrogenase (NiFe) small subunit (hydA) K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D GPA_10320 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D GPA_10310 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D GPA_10330 pyruvate ferredoxin oxidoreductase, gamma subunit/pyruvate ferredoxin oxidoreductase, delta subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D GPA_16670 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D GPA_16680 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:gpa00643]
D GPA_11950 Predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:gpa03020]
D GPA_18250 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GPA_18260 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GPA_33360 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:gpa03010]
D GPA_21990 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D GPA_21880 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D GPA_12540 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D GPA_21910 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D GPA_21920 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D GPA_03450 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D GPA_05910 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D GPA_21960 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D GPA_12520 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D GPA_21420 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D GPA_22020 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D GPA_34010 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D GPA_21930 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D GPA_21900 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D GPA_30210 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D GPA_12510 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D GPA_21430 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D GPA_21950 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D GPA_21860 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D GPA_21980 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D GPA_16140 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D GPA_21890 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D GPA_05640 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D GPA_29160 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D GPA_00550 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D GPA_22000 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D GPA_34040 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D GPA_21940 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D GPA_00560 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D GPA_21970 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D GPA_21870 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D GPA_31600 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D GPA_06140 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D GPA_12780 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D GPA_29170 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D GPA_16090 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D GPA_R_36180 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GPA_R_36170 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GPA_R_36190 5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:gpa00970]
D GPA_T_35850 GPA_T_35850 K14218 tRNA-Ala; tRNA Ala
D GPA_T_36090 GPA_T_36090 K14218 tRNA-Ala; tRNA Ala
D GPA_T_36050 GPA_T_36050 K14218 tRNA-Ala; tRNA Ala
D GPA_T_35890 GPA_T_35890 K14219 tRNA-Arg; tRNA Arg
D GPA_T_35800 GPA_T_35800 K14219 tRNA-Arg; tRNA Arg
D GPA_T_36030 GPA_T_36030 K14219 tRNA-Arg; tRNA Arg
D GPA_T_35720 GPA_T_35720 K14219 tRNA-Arg; tRNA Arg
D GPA_T_35900 GPA_T_35900 K14220 tRNA-Asn; tRNA Asn
D GPA_T_35960 GPA_T_35960 K14221 tRNA-Asp; tRNA Asp
D GPA_T_35970 GPA_T_35970 K14221 tRNA-Asp; tRNA Asp
D GPA_T_35740 GPA_T_35740 K14222 tRNA-Cys; tRNA Cys
D GPA_T_35840 GPA_T_35840 K14223 tRNA-Gln; tRNA Gln
D GPA_T_35860 GPA_T_35860 K14223 tRNA-Gln; tRNA Gln
D GPA_T_35870 GPA_T_35870 K14224 tRNA-Glu; tRNA Glu
D GPA_T_35880 GPA_T_35880 K14224 tRNA-Glu; tRNA Glu
D GPA_T_36150 GPA_T_36150 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35810 GPA_T_35810 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35730 GPA_T_35730 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35750 GPA_T_35750 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35700 GPA_T_35700 K14226 tRNA-His; tRNA His
D GPA_T_36040 GPA_T_36040 K14227 tRNA-Ile; tRNA Ile
D GPA_T_36110 GPA_T_36110 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35760 GPA_T_35760 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35820 GPA_T_35820 K14228 tRNA-Leu; tRNA Leu
D GPA_T_36160 GPA_T_36160 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35770 GPA_T_35770 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35830 GPA_T_35830 K14229 tRNA-Lys; tRNA Lys
D GPA_T_35710 GPA_T_35710 K14229 tRNA-Lys; tRNA Lys
D GPA_T_35950 GPA_T_35950 K14230 tRNA-Met; tRNA Met
D GPA_T_35930 GPA_T_35930 K14230 tRNA-Met; tRNA Met
D GPA_T_36000 GPA_T_36000 K14230 tRNA-Met; tRNA Met
D GPA_T_36080 GPA_T_36080 K14231 tRNA-Phe; tRNA Phe
D GPA_T_36100 GPA_T_36100 K14232 tRNA-Pro; tRNA Pro
D GPA_T_36130 GPA_T_36130 K14232 tRNA-Pro; tRNA Pro
D GPA_T_36140 GPA_T_36140 K14232 tRNA-Pro; tRNA Pro
D GPA_T_36060 GPA_T_36060 K14233 tRNA-Ser; tRNA Ser
D GPA_T_35790 GPA_T_35790 K14233 tRNA-Ser; tRNA Ser
D GPA_T_36070 GPA_T_36070 K14233 tRNA-Ser; tRNA Ser
D GPA_T_35780 GPA_T_35780 K14233 tRNA-Ser; tRNA Ser
D GPA_T_36020 GPA_T_36020 K14234 tRNA-Thr; tRNA Thr
D GPA_T_35990 GPA_T_35990 K14234 tRNA-Thr; tRNA Thr
D GPA_T_35920 GPA_T_35920 K14234 tRNA-Thr; tRNA Thr
D GPA_T_36010 GPA_T_36010 K14235 tRNA-Trp; tRNA Trp
D GPA_T_35980 GPA_T_35980 K14236 tRNA-Tyr; tRNA Tyr
D GPA_T_35940 GPA_T_35940 K14237 tRNA-Val; tRNA Val
D GPA_T_36120 GPA_T_36120 K14237 tRNA-Val; tRNA Val
D GPA_T_35910 GPA_T_35910 K14237 tRNA-Val; tRNA Val
D GPA_19350 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GPA_32020 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GPA_17180 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GPA_08420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GPA_05870 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GPA_02630 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GPA_11890 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GPA_08710 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GPA_02650 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GPA_10270 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GPA_04470 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GPA_07260 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GPA_02880 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GPA_07940 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GPA_00870 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GPA_24270 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:gpa03060]
D GPA_21450 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D GPA_24600 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GPA_12800 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GPA_06000 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GPA_07280 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D GPA_29060 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D GPA_12280 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D GPA_15760 Twin arginine targeting (Tat) protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D GPA_29200 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:gpa04122]
D GPA_24840 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GPA_24830 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GPA_16290 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GPA_33370 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:gpa03018]
D GPA_16250 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GPA_17720 Superfamily II DNA and RNA helicases K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GPA_28740 Superfamily II DNA and RNA helicases K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GPA_31840 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GPA_03630 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GPA_03490 Predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GPA_13820 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GPA_15860 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:gpa03030]
D GPA_34940 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GPA_32480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GPA_12500 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GPA_14680 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_18970 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_12530 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_31810 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GPA_24930 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:gpa03410]
D GPA_23640 DNA-(apurinic or apyrimidinic site) lyase/endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GPA_09830 HhH-GPD superfamily base excision DNA repair protein. K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GPA_11980 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GPA_16360 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GPA_27510 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GPA_20040 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GPA_20050 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GPA_24930 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:gpa03420]
D GPA_05430 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D GPA_07710 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D GPA_05160 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GPA_24930 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:gpa03430]
D GPA_05160 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GPA_04820 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GPA_14680 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_18970 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_12530 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_32480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GPA_34940 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GPA_24930 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:gpa03440]
D GPA_14680 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_18970 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_12530 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_03590 RecA protein K03553 recA; recombination protein RecA
D GPA_24770 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GPA_24760 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GPA_08530 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GPA_20770 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GPA_11390 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GPA_32480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GPA_34940 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
D GPA_04010 Ku protein, prokaryotic K10979 ku; DNA end-binding protein Ku
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:gpa02010]
D GPA_10830 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D GPA_10840 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D GPA_19940 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GPA_24870 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GPA_19930 ABC-type sulfate transport system, permease component K02018 modB; molybdate transport system permease protein
D GPA_19920 ABC-type sugar transport systems, ATPase components K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GPA_24850 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GPA_12110 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D GPA_12120 ABC-type proline/glycine betaine transport systems, ATPase components K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GPA_09100 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D GPA_30560 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D GPA_17060 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D GPA_17070 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D GPA_26240 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein
D GPA_26250 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein
D GPA_26260 phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GPA_31380 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GPA_31350 amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-) K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GPA_26110 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein
D GPA_26100 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D GPA_13650 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13230 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_20080 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13580 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13300 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13520 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_20100 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_24480 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_20090 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_00270 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GPA_31400 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D GPA_31410 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GPA_18440 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D GPA_08450 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C
D GPA_08460 ABC-type transport system involved in cytochrome c biogenesis, permease component K02194 ccmB; heme exporter protein B
D GPA_08470 ABC-type multidrug transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D GPA_00810 Cell division protein K09811 ftsX; cell division transport system permease protein
D GPA_13200 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13270 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13560 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13620 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_20160 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13180 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13260 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13490 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13550 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13610 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_20150 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_23320 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:gpa03070]
D GPA_24600 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GPA_21450 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D GPA_12800 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GPA_06000 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GPA_07280 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D GPA_29060 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D GPA_12280 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D GPA_15760 Twin arginine targeting (Tat) protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D GPA_18860 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D GPA_13450 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D GPA_35350 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:gpa02020]
D GPA_17100 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GPA_15500 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3
D GPA_11370 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3
D GPA_17060 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D GPA_09080 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D GPA_12580 K+-transporting ATPase, KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D GPA_12570 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D GPA_12560 K+-transporting ATPase, c chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D GPA_12760 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GPA_05220 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
D GPA_05210 D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GPA_05200 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) K03740 dltD; D-alanine transfer protein
D GPA_14280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D GPA_14270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D GPA_27680 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GPA_18410 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GPA_27670 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GPA_18440 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D GPA_31410 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GPA_31400 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D GPA_11550 Signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GPA_13940 Signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GPA_04960 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./GAF domain. K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D GPA_04950 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07696 nreC; two-component system, NarL family, response regulator NreC
D GPA_07800 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D GPA_02120 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_10780 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_12350 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D GPA_23420 hydrogenase (NiFe) small subunit (hydA) K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D GPA_23440 Ni,Fe-hydrogenase I cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D GPA_08840 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GPA_08880 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D GPA_08860 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GPA_33080 Anaerobic dehydrogenases, typically selenocysteine-containing K08357 ttrA; tetrathionate reductase subunit A
D GPA_02470 Fe-S-cluster-containing hydrogenase components 1 K08358 ttrB; tetrathionate reductase subunit B
D GPA_11610 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GPA_11600 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GPA_01100 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GPA_20950 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GPA_20960 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D GPA_12040 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:gpa02024]
D GPA_09080 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D GPA_26020 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D GPA_08140 Amino acid transporters K20265 gadC; glutamate:GABA antiporter
D GPA_14280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D GPA_14270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D GPA_29370 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GPA_24920 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GPA_29380 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GPA_21660 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GPA_24910 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GPA_24900 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GPA_21670 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GPA_29400 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GPA_24890 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GPA_21680 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GPA_29410 ABC-type oligopeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GPA_12800 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GPA_24600 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GPA_21450 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D GPA_06000 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GPA_27680 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GPA_18410 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GPA_27670 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GPA_18440 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:gpa02030]
D GPA_08840 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GPA_08860 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GPA_08880 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GPA_16250 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D GPA_00920 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:gpa01502]
D GPA_11840 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_12890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_20920 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_21170 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:gpa01503]
D GPA_05220 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
D GPA_05210 D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GPA_05200 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:gpa01000]
C 01001 Protein kinases [BR:gpa01001]
D GPA_14320 PASTA domain./Protein kinase domain. K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D GPA_34980 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D GPA_17340 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D GPA_14280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D GPA_27680 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GPA_11550 Signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GPA_13940 Signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GPA_04960 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./GAF domain. K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D GPA_14040 Putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D GPA_08860 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GPA_12040 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D GPA_30610 Signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:gpa01009]
D GPA_29540 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GPA_26660 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:gpa01002]
D GPA_12330 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GPA_31180 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GPA_10660 NlpC/P60 family. K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_31800 Uncharacterized protein conserved in bacteria K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_14290 Uncharacterized protein conserved in bacteria K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_35300 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_07030 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GPA_24990 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GPA_32370 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GPA_21350 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GPA_30970 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_17370 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_27980 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_35250 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_31420 Predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D GPA_12660 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D GPA_01270 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GPA_21380 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GPA_17310 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GPA_15320 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GPA_07970 Predicted membrane-associated Zn-dependent proteases 1 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GPA_02680 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GPA_03710 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GPA_16070 SOS-response transcriptional repressors (RecA-mediated autopeptidases) K01356 lexA; repressor LexA [EC:3.4.21.88]
D GPA_29200 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D GPA_00820 C-terminal peptidase (prc) K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GPA_31830 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
C 01003 Glycosyltransferases [BR:gpa01003]
D GPA_00920 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GPA_00900 Membrane carboxypeptidase (penicillin-binding protein) K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D GPA_07680 Transglycosylase. K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D GPA_25410 Glycosyltransferases, probably involved in cell wall biogenesis K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:gpa01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:gpa01011]
D GPA_31730 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GPA_11840 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_12890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_20920 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GPA_03040 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GPA_21170 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GPA_00920 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GPA_00900 Membrane carboxypeptidase (penicillin-binding protein) K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D GPA_07680 Transglycosylase. K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D GPA_10660 NlpC/P60 family. K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_31800 Uncharacterized protein conserved in bacteria K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_14290 Uncharacterized protein conserved in bacteria K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_35300 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GPA_30970 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_17370 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_27980 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_35250 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D GPA_17200 Predicted periplasmic solute-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:gpa01004]
D GPA_22260 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GPA_06570 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GPA_22340 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:gpa01006]
D GPA_15200 farnesyl-diphosphate synthase/geranylgeranyl-diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GPA_03690 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:gpa01007]
D GPA_04130 Glutamyl-and glutaminyl-tRNA synthetases K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GPA_00870 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GPA_24270 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GPA_02880 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GPA_08710 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GPA_04470 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GPA_02650 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GPA_10270 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GPA_07260 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GPA_08420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GPA_05870 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GPA_11890 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GPA_07940 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GPA_02630 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GPA_17180 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GPA_25850 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D GPA_02110 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GPA_31930 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GPA_16640 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GPA_10720 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GPA_02260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:gpa00194]
D GPA_32570 ATP synthase, F1 epsilon subunit (delta in mitochondria) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GPA_32580 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GPA_32590 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GPA_32620 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:gpa03000]
D GPA_13210 AraC-type DNA-binding domain-containing proteins K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D GPA_28720 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D GPA_13540 AraC-type DNA-binding domain-containing proteins K07506 K07506; AraC family transcriptional regulator
D GPA_11980 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GPA_02340 Transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D GPA_26320 Transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D GPA_16570 Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D GPA_06230 Transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D GPA_18570 Transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D GPA_13860 Predicted transcriptional regulators K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D GPA_07400 Predicted transcriptional regulators K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D GPA_26860 Predicted transcriptional regulators K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D GPA_24340 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D GPA_07790 Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D GPA_04590 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D GPA_23710 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D GPA_32060 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D GPA_24280 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D GPA_31200 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D GPA_33390 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D GPA_13100 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D GPA_15170 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D GPA_08990 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GPA_33250 Predicted transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D GPA_16900 Helix-turn-helix. K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D GPA_15080 N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein
D GPA_08540 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D GPA_19120 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D GPA_08740 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator
D GPA_02350 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator
D GPA_13790 transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D GPA_09610 addiction module antitoxin, RelB/DinJ family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D GPA_15540 RelB antitoxin. K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D GPA_04550 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D GPA_34920 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GPA_00960 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D GPA_33010 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GPA_03750 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D GPA_21230 Uncharacterized protein conserved in bacteria K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:gpa03021]
D GPA_18250 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GPA_18260 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GPA_33360 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GPA_09300 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GPA_30300 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GPA_04340 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GPA_07880 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GPA_01150 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_17390 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_21020 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_21440 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D GPA_01580 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_07270 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GPA_31840 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:gpa03019]
D GPA_06110 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GPA_03490 Predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GPA_03630 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GPA_17720 Superfamily II DNA and RNA helicases K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GPA_28740 Superfamily II DNA and RNA helicases K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GPA_16250 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GPA_31840 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GPA_13820 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GPA_15860 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
C 03041 Spliceosome
C 03011 Ribosome [BR:gpa03011]
D GPA_21990 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D GPA_21880 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D GPA_12540 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D GPA_21910 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D GPA_21920 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D GPA_03450 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D GPA_05910 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D GPA_21960 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D GPA_12520 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D GPA_21420 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D GPA_22020 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D GPA_34010 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D GPA_21930 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D GPA_21900 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D GPA_12510 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D GPA_21430 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D GPA_30210 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D GPA_21950 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D GPA_21860 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D GPA_21980 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D GPA_16140 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D GPA_21890 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D GPA_05640 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D GPA_29160 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D GPA_00550 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D GPA_22000 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D GPA_34040 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D GPA_21940 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D GPA_00560 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D GPA_21970 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D GPA_21870 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D GPA_31600 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D GPA_06140 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D GPA_12780 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D GPA_29170 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D GPA_16090 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D GPA_R_36190 5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GPA_R_36180 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GPA_R_36170 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:gpa03009]
D GPA_06110 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GPA_03340 GTP-binding protein Era K03595 era; GTPase
D GPA_07880 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GPA_01150 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_17390 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_21020 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_21440 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D GPA_01580 Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D GPA_12820 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GPA_21220 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GPA_18200 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GPA_27520 Uncharacterized conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GPA_12880 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GPA_17190 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GPA_06580 ribosome-associated GTPase EngA K03977 engA; GTPase
D GPA_03700 GTP-binding protein HflX K03665 hflX; GTPase
D GPA_09220 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GPA_03320 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D GPA_16470 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D GPA_32250 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:gpa03016]
D GPA_07940 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GPA_04470 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GPA_10270 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GPA_08710 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GPA_02880 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GPA_07260 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GPA_08420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GPA_17180 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GPA_02630 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GPA_11890 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GPA_02650 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GPA_00870 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GPA_24270 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GPA_04810 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GPA_16240 Uncharacterized conserved protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D GPA_03690 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GPA_05870 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GPA_04130 Glutamyl-and glutaminyl-tRNA synthetases K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GPA_01560 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D GPA_30770 hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D GPA_06370 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GPA_29860 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GPA_33370 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GPA_15630 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GPA_06740 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D GPA_24660 Predicted nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:gpa03012]
D GPA_24360 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GPA_21460 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D GPA_33990 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D GPA_02430 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D GPA_08020 ribosome recycling factor K02838 frr; ribosome recycling factor
D GPA_16520 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GPA_17320 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D GPA_00760 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:gpa03110]
D GPA_13870 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GPA_07250 ATPases with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D GPA_26660 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D GPA_13820 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GPA_15860 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GPA_13850 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein
D GPA_10570 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D GPA_15320 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GPA_15770 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D GPA_15780 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D GPA_27010 Uncharacterized component of anaerobic dehydrogenases K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D GPA_10020 Uncharacterized component of anaerobic dehydrogenases K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D GPA_21770 Uncharacterized component of anaerobic dehydrogenases K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D GPA_25600 Uncharacterized component of anaerobic dehydrogenases K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D GPA_32310 Uncharacterized component of anaerobic dehydrogenases K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D GPA_23130 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D GPA_12620 Parvulin-like peptidyl-prolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D GPA_02560 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:gpa04131]
D GPA_23150 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GPA_14490 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D GPA_05070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GPA_26660 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D GPA_09150 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:gpa03051]
D GPA_26660 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:gpa03032]
D GPA_31810 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GPA_14530 PIF1 helicase. K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D GPA_12760 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GPA_12500 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GPA_22620 DNA replication protein K02315 dnaC; DNA replication protein DnaC
D GPA_35380 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D GPA_14680 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_18970 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_12530 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_32480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GPA_34940 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GPA_24930 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GPA_12710 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:gpa03036]
D GPA_06110 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GPA_14490 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D GPA_13850 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein
D GPA_12760 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GPA_00810 Cell division protein K09811 ftsX; cell division transport system permease protein
D GPA_20760 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GPA_20700 DivIVA domain K04074 divIVA; cell division initiation protein
D GPA_23220 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D GPA_23250 Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D GPA_14700 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein
D GPA_18920 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D GPA_12960 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D GPA_31040 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D GPA_34920 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GPA_12820 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GPA_31790 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
D GPA_05080 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:gpa03400]
D GPA_11990 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GPA_12000 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GPA_23640 DNA-(apurinic or apyrimidinic site) lyase/endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GPA_03760 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GPA_16360 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GPA_09830 HhH-GPD superfamily base excision DNA repair protein. K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GPA_11980 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GPA_27510 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GPA_20040 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GPA_20050 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GPA_24930 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GPA_05430 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D GPA_07710 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D GPA_05160 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GPA_18250 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GPA_18260 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GPA_33360 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GPA_04820 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GPA_32480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GPA_34940 DNA polymerase III, alpha subunit (gram-positive type) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GPA_14680 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_18970 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_12530 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_03590 RecA protein K03553 recA; recombination protein RecA
D GPA_24770 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GPA_24760 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GPA_12490 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D GPA_08530 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GPA_20770 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GPA_11390 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GPA_04010 Ku protein, prokaryotic K10979 ku; DNA end-binding protein Ku
D GPA_12710 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GPA_19090 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GPA_03710 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GPA_16070 SOS-response transcriptional repressors (RecA-mediated autopeptidases) K01356 lexA; repressor LexA [EC:3.4.21.88]
D GPA_23840 hypothetical protein K14623 dinD; DNA-damage-inducible protein D
D GPA_12910 exonuclease, DNA polymerase III, epsilon subunit family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
C 03029 Mitochondrial biogenesis [BR:gpa03029]
D GPA_21460 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D GPA_33990 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D GPA_03340 GTP-binding protein Era K03595 era; GTPase
D GPA_00870 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GPA_10270 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GPA_08420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GPA_02880 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GPA_19350 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GPA_32020 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GPA_14530 PIF1 helicase. K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D GPA_14680 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_18970 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_12530 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GPA_13820 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GPA_15860 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GPA_12800 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GPA_26660 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:gpa02000]
D GPA_13200 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13270 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13560 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13620 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_20160 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GPA_13180 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13260 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13490 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13550 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_13610 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_20150 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D GPA_23320 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GPA_30420 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D GPA_29190 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D GPA_09650 ATPase components of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein
D GPA_19940 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GPA_24870 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GPA_19930 ABC-type sulfate transport system, permease component K02018 modB; molybdate transport system permease protein
D GPA_19920 ABC-type sugar transport systems, ATPase components K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GPA_24850 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GPA_10830 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D GPA_10840 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D GPA_12110 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D GPA_12120 ABC-type proline/glycine betaine transport systems, ATPase components K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GPA_34840 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D GPA_18340 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D GPA_34820 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D GPA_34830 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D GPA_09100 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D GPA_30560 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D GPA_07320 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D GPA_17060 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D GPA_17070 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D GPA_26240 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein
D GPA_26250 ABC-type phosphate/phosphonate transport system, permease component K02042 phnE; phosphonate transport system permease protein
D GPA_26260 phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GPA_31380 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GPA_31350 amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-) K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GPA_26110 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein
D GPA_26100 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D GPA_29480 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GPA_08310 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GPA_26120 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GPA_08300 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K02029 ABC.PA.P; polar amino acid transport system permease protein
D GPA_29370 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GPA_24920 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GPA_29380 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GPA_21660 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GPA_24910 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GPA_24900 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GPA_21670 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GPA_29400 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GPA_24890 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GPA_21680 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GPA_29410 ABC-type oligopeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GPA_17760 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D GPA_17730 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D GPA_31580 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D GPA_17740 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D GPA_01610 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D GPA_13220 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D GPA_13280 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D GPA_13660 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D GPA_13650 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13230 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_20080 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13580 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13300 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_13520 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D GPA_20100 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_24480 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_20090 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_13290 ATPase components of various ABC-type transport systems, contain duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_20180 ATPase components of various ABC-type transport systems, contain duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_13640 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GPA_00270 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GPA_31400 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D GPA_31410 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GPA_18440 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D GPA_18550 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D GPA_18560 ABC-type multidrug transport system, ATPase component K25148 berA; beta-exotoxin I transport system ATP-binding protein
D GPA_08450 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C
D GPA_08460 ABC-type transport system involved in cytochrome c biogenesis, permease component K02194 ccmB; heme exporter protein B
D GPA_08470 ABC-type multidrug transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D GPA_00810 Cell division protein K09811 ftsX; cell division transport system permease protein
D GPA_09700 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_30340 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_25020 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_25040 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_06780 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_30080 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_00260 ABC-type polysaccharide/polyol phosphate export systems, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_29970 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_07660 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GPA_06200 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_07640 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_25010 Response regulator of the LytR/AlgR family K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_06770 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_25030 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_30090 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_09440 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_30350 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GPA_32820 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D GPA_05500 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D GPA_02800 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D GPA_05940 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D GPA_10820 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D GPA_25380 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GPA_32830 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GPA_04670 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GPA_05510 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GPA_02810 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GPA_14240 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GPA_29460 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D GPA_29710 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D GPA_03950 Di-and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D GPA_15460 Di-and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D GPA_25170 Di-and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D GPA_15370 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D GPA_26060 Arabinose efflux permease K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D GPA_19760 Nitrate/nitrite transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D GPA_19770 Major Facilitator Superfamily. K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D GPA_33820 Arabinose efflux permease K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D GPA_09200 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GPA_09150 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
D GPA_33470 Sugar phosphate permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D GPA_19800 Arabinose efflux permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D GPA_26600 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) K06188 aqpZ; aquaporin Z
D GPA_07810 ammonium transporter K03320 amt; ammonium transporter, Amt family
D GPA_27270 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D GPA_30380 Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D GPA_12140 Mg/Co/Ni transporter MgtE (contains CBS domain) K06213 mgtE; magnesium transporter
D GPA_11480 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GPA_27130 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GPA_07460 Amino acid transporters K03758 arcD; arginine:ornithine antiporter / lysine permease
D GPA_18360 Amino acid transporters K03758 arcD; arginine:ornithine antiporter / lysine permease
D GPA_27170 Amino acid transporters K03758 arcD; arginine:ornithine antiporter / lysine permease
D GPA_08140 Amino acid transporters K20265 gadC; glutamate:GABA antiporter
D GPA_09810 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D GPA_10970 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D GPA_16480 sodium/proton antiporter, NhaA family (TC 2.A.33.1.1) K03313 nhaA; Na+:H+ antiporter, NhaA family
D GPA_27410 sodium/proton antiporter, NhaA family (TC 2.A.33.1.1) K03313 nhaA; Na+:H+ antiporter, NhaA family
D GPA_12180 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D GPA_09660 sodium/proton antiporter, CPA1 family (TC 2.A.36) K24163 nhaK; monovalent cation/hydrogen antiporter
D GPA_13910 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein
D GPA_11420 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D GPA_11430 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D GPA_31220 uracil-xanthine permease K02824 uraA; uracil permease
D GPA_00720 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D GPA_30630 Sulfate permease and related transporters (MFS superfamily) K03321 TC.SULP; sulfate permease, SulP family
D GPA_33780 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D GPA_05660 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D GPA_05650 Predicted membrane protein K26606 azlD; branched chain amino acid efflux pump
D GPA_24470 Predicted membrane protein K23675 fmnP; riboflavin transporter
D GPA_26430 Uncharacterized membrane protein K22736 VIT; vacuolar iron transporter family protein
D GPA_23380 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D GPA_29100 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D GPA_07910 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D GPA_08320 Cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D GPA_32280 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_18040 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_17880 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_13960 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_18140 Anaerobic dehydrogenases, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D GPA_10040 Fe-S-cluster-containing hydrogenase components 1 K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D GPA_18150 Fe-S-cluster-containing hydrogenase components 1 K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D GPA_17890 Fe-S-cluster-containing hydrogenase components 1 K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D GPA_18160 Polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D GPA_32300 Polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D GPA_17900 Polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D GPA_25490 Anaerobic dehydrogenases, typically selenocysteine-containing K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D GPA_17600 Formate-dependent nitrite reductase, membrane component K16294 psrC; polysulfide reductase chain C
D GPA_33080 Anaerobic dehydrogenases, typically selenocysteine-containing K08357 ttrA; tetrathionate reductase subunit A
D GPA_02470 Fe-S-cluster-containing hydrogenase components 1 K08358 ttrB; tetrathionate reductase subunit B
D GPA_17340 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D GPA_15140 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D GPA_15150 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D GPA_15160 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D GPA_07180 hypothetical protein K05770 TSPO; translocator protein
D GPA_08480 Cytochrome c biogenesis factor K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:gpa02044]
D GPA_12330 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GPA_12350 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D GPA_12380 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GPA_17010 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D GPA_12320 Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM
D GPA_16950 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D GPA_12370 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D GPA_32660 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GPA_18860 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D GPA_13450 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D GPA_35350 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D GPA_24600 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GPA_21450 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D GPA_06000 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GPA_12800 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GPA_07280 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D GPA_29060 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D GPA_12280 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D GPA_15760 Twin arginine targeting (Tat) protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:gpa02042]
D GPA_11480 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GPA_27130 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:gpa02022]
D GPA_17100 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GPA_15500 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3
D GPA_11370 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3
D GPA_09080 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D GPA_14280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D GPA_14270 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D GPA_27680 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GPA_18410 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GPA_27670 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GPA_10760 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D GPA_35470 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D GPA_11550 Signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GPA_13940 Signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D GPA_04960 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./GAF domain. K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D GPA_04950 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07696 nreC; two-component system, NarL family, response regulator NreC
D GPA_14040 Putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D GPA_11690 Response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D GPA_08860 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GPA_12040 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D GPA_30610 Signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:gpa02035]
D GPA_08860 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GPA_08880 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D GPA_08840 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GPA_16950 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D GPA_12370 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D GPA_12350 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D GPA_12380 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GPA_17010 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D GPA_12330 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GPA_12320 Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:gpa04812]
D GPA_23220 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D GPA_20760 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GPA_14700 plasmid segregation oscillating ATPase ParF K03496 parA; chromosome partitioning protein
D GPA_18920 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D GPA_12960 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D GPA_31040 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D GPA_34920 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:gpa04147]
D GPA_26660 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D GPA_16250 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GPA_05070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GPA_14490 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D GPA_15860 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GPA_13820 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GPA_11670 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GPA_21460 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D GPA_04810 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GPA_06890 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GPA_29540 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GPA_21760 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GPA_00950 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GPA_15240 N-Dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D GPA_02120 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_10780 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GPA_16630 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GPA_02770 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 02048 Prokaryotic defense system [BR:gpa02048]
D GPA_06980 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D GPA_06960 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D GPA_06990 CRISPR-associated protein (Cas_Csn2). K19137 csn2; CRISPR-associated protein Csn2
D GPA_31120 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GPA_31110 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GPA_35010 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GPA_26720 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D GPA_35200 Restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D GPA_35210 Adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GPA_33220 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D GPA_05290 Cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE
D GPA_09610 addiction module antitoxin, RelB/DinJ family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D GPA_15540 RelB antitoxin. K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D GPA_24110 toxin-antitoxin system, toxin component, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D GPA_24100 prevent-host-death family protein K19159 yefM; antitoxin YefM
D GPA_34980 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D GPA_03070 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4
D GPA_07420 Plasmid stabilisation system protein. K19092 parE1_3_4; toxin ParE1/3/4
D GPA_08090 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D GPA_11060 death-on-curing family protein K07341 doc; death on curing protein
D GPA_15100 Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D GPA_15110 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D GPA_33250 Predicted transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D GPA_24660 Predicted nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D GPA_16910 Zeta toxin. K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
D GPA_16900 Helix-turn-helix. K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D GPA_22110 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D GPA_20760 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GPA_23220 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:gpa01504]
D GPA_12180 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D GPA_23690 Aminoglycoside-2''-adenylyltransferase. K19545 lnuA_C_D_E; lincosamide nucleotidyltransferase A/C/D/E
D GPA_05220 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
D GPA_05210 D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GPA_05200 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:gpa03100]
D GPA_T_35850 GPA_T_35850 K14218 tRNA-Ala; tRNA Ala
D GPA_T_36090 GPA_T_36090 K14218 tRNA-Ala; tRNA Ala
D GPA_T_36050 GPA_T_36050 K14218 tRNA-Ala; tRNA Ala
D GPA_T_35890 GPA_T_35890 K14219 tRNA-Arg; tRNA Arg
D GPA_T_35800 GPA_T_35800 K14219 tRNA-Arg; tRNA Arg
D GPA_T_36030 GPA_T_36030 K14219 tRNA-Arg; tRNA Arg
D GPA_T_35720 GPA_T_35720 K14219 tRNA-Arg; tRNA Arg
D GPA_T_35900 GPA_T_35900 K14220 tRNA-Asn; tRNA Asn
D GPA_T_35960 GPA_T_35960 K14221 tRNA-Asp; tRNA Asp
D GPA_T_35970 GPA_T_35970 K14221 tRNA-Asp; tRNA Asp
D GPA_T_35740 GPA_T_35740 K14222 tRNA-Cys; tRNA Cys
D GPA_T_35840 GPA_T_35840 K14223 tRNA-Gln; tRNA Gln
D GPA_T_35860 GPA_T_35860 K14223 tRNA-Gln; tRNA Gln
D GPA_T_35870 GPA_T_35870 K14224 tRNA-Glu; tRNA Glu
D GPA_T_35880 GPA_T_35880 K14224 tRNA-Glu; tRNA Glu
D GPA_T_36150 GPA_T_36150 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35810 GPA_T_35810 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35730 GPA_T_35730 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35750 GPA_T_35750 K14225 tRNA-Gly; tRNA Gly
D GPA_T_35700 GPA_T_35700 K14226 tRNA-His; tRNA His
D GPA_T_36040 GPA_T_36040 K14227 tRNA-Ile; tRNA Ile
D GPA_T_36110 GPA_T_36110 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35760 GPA_T_35760 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35820 GPA_T_35820 K14228 tRNA-Leu; tRNA Leu
D GPA_T_36160 GPA_T_36160 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35770 GPA_T_35770 K14228 tRNA-Leu; tRNA Leu
D GPA_T_35830 GPA_T_35830 K14229 tRNA-Lys; tRNA Lys
D GPA_T_35710 GPA_T_35710 K14229 tRNA-Lys; tRNA Lys
D GPA_T_35950 GPA_T_35950 K14230 tRNA-Met; tRNA Met
D GPA_T_35930 GPA_T_35930 K14230 tRNA-Met; tRNA Met
D GPA_T_36000 GPA_T_36000 K14230 tRNA-Met; tRNA Met
D GPA_T_36080 GPA_T_36080 K14231 tRNA-Phe; tRNA Phe
D GPA_T_36100 GPA_T_36100 K14232 tRNA-Pro; tRNA Pro
D GPA_T_36130 GPA_T_36130 K14232 tRNA-Pro; tRNA Pro
D GPA_T_36140 GPA_T_36140 K14232 tRNA-Pro; tRNA Pro
D GPA_T_36060 GPA_T_36060 K14233 tRNA-Ser; tRNA Ser
D GPA_T_35790 GPA_T_35790 K14233 tRNA-Ser; tRNA Ser
D GPA_T_36070 GPA_T_36070 K14233 tRNA-Ser; tRNA Ser
D GPA_T_35780 GPA_T_35780 K14233 tRNA-Ser; tRNA Ser
D GPA_T_36020 GPA_T_36020 K14234 tRNA-Thr; tRNA Thr
D GPA_T_35990 GPA_T_35990 K14234 tRNA-Thr; tRNA Thr
D GPA_T_35920 GPA_T_35920 K14234 tRNA-Thr; tRNA Thr
D GPA_T_36010 GPA_T_36010 K14235 tRNA-Trp; tRNA Trp
D GPA_T_35980 GPA_T_35980 K14236 tRNA-Tyr; tRNA Tyr
D GPA_T_35940 GPA_T_35940 K14237 tRNA-Val; tRNA Val
D GPA_T_36120 GPA_T_36120 K14237 tRNA-Val; tRNA Val
D GPA_T_35910 GPA_T_35910 K14237 tRNA-Val; tRNA Val
D GPA_R_36180 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GPA_R_36170 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GPA_R_36190 5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GPA_09790 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D GPA_12250 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D GPA_04160 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D GPA_12240 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D GPA_25060 Dehydrogenases (flavoproteins) K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D GPA_27590 NADPH:quinone reductase and related Zn-dependent oxidoreductases K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D GPA_10650 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D GPA_30040 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D GPA_31640 Desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D GPA_16390 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GPA_19470 Predicted Fe-S oxidoreductases K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D GPA_16890 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D GPA_15600 Fe-S-cluster-containing hydrogenase components 2 K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D GPA_12440 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D GPA_08150 ornithine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D GPA_25390 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D GPA_29280 Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D GPA_27530 Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D GPA_19400 Predicted acyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D GPA_31650 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GPA_08570 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GPA_06340 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D GPA_05840 Uncharacterized protein conserved in bacteria K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D GPA_20440 Uncharacterized conserved protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D GPA_09510 Reverse transcriptase (RNA-dependent DNA polymerase). K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D GPA_25080 Predicted acyl-CoA transferases/carnitine dehydratase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21]
D GPA_04050 conserved hypothetical protein TIGR00051 K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GPA_17330 Capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GPA_17210 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D GPA_22130 Micrococcal nuclease (thermonuclease) homologs K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D GPA_07050 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GPA_07070 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GPA_08680 MoxR-like ATPases K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GPA_28540 CoA-substrate-specific enzyme activase, putative K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D GPA_17690 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D GPA_15610 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) K12143 hyfH; hydrogenase-4 component H
D GPA_29760 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D GPA_04930 Uncharacterized protein involved in formation of periplasmic nitrate reductase K02570 napD; periplasmic nitrate reductase NapD
D GPA_04300 ech hydrogenase subunit B K14087 echB; ech hydrogenase subunit B
D GPA_04290 ech hydrogenase subunit C K14088 echC; ech hydrogenase subunit C
D GPA_04250 hypothetical protein K14091 echF; ech hydrogenase subunit F
D GPA_14210 hypothetical protein K02573 napG; ferredoxin-type protein NapG
D GPA_04940 hypothetical protein K02574 napH; ferredoxin-type protein NapH
D GPA_27030 4Fe-4S binding domain. K02574 napH; ferredoxin-type protein NapH
D GPA_14220 hypothetical protein K02574 napH; ferredoxin-type protein NapH
D GPA_25130 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D GPA_25050 Ferredoxin-like protein K03855 fixX; ferredoxin like protein
D GPA_21050 Fe-S-cluster-containing hydrogenase components 1 K04014 nrfC; protein NrfC
D GPA_18000 Formate-dependent nitrite reductase, membrane component K04015 nrfD; protein NrfD
D GPA_19540 Formate-dependent nitrite reductase, membrane component K04015 nrfD; protein NrfD
D GPA_16810 sulfur relay protein, TusE/DsrC/DsvC family K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
D GPA_18650 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D GPA_17550 Predicted unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D GPA_27730 Predicted unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GPA_04400 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D GPA_24700 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D GPA_30510 Transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D GPA_34080 trigger factor K03545 tig; trigger factor
D GPA_19620 hypothetical protein K03545 tig; trigger factor
D GPA_11640 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D GPA_11630 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D GPA_13800 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D GPA_20370 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D GPA_32850 O-6-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D GPA_30250 O-6-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D GPA_31050 Predicted endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D GPA_34990 Predicted endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D GPA_24150 hypothetical protein K07481 K07481; transposase, IS5 family
D GPA_00160 hypothetical protein K07483 K07483; transposase
D GPA_01400 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase
D GPA_23210 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D GPA_11810 Phage shock protein A (IM30), suppresses sigma54-dependent transcription K03969 pspA; phage shock protein A
D GPA_11830 Phage shock protein A (IM30), suppresses sigma54-dependent transcription K03969 pspA; phage shock protein A
D GPA_26540 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E
D GPA_08370 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GPA_12210 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D GPA_32350 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D GPA_10440 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D GPA_26680 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D GPA_32010 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GPA_24420 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GPA_24460 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D GPA_12810 Predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein
D GPA_25900 conserved hypothetical protein TIGR00370 K06351 kipI; inhibitor of KinA
D GPA_03660 Uncharacterized protein conserved in bacteria K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D GPA_27430 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D GPA_03310 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D GPA_03540 Uncharacterized protein conserved in bacteria K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D GPA_04560 hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D GPA_26190 ABC-type phosphonate transport system, ATPase component K05781 phnK; putative phosphonate transport system ATP-binding protein
D GPA_23700 Predicted integral membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GPA_29720 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D GPA_24130 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE
D GPA_12050 Uncharacterized conserved protein K03744 lemA; LemA protein
D GPA_10230 Uncharacterized membrane protein K03748 sanA; SanA protein
D GPA_30390 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
D GPA_15230 Predicted membrane protein K08972 K08972; putative membrane protein
D GPA_27640 Predicted membrane protein K08974 K08974; putative membrane protein
D GPA_11500 Predicted membrane protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D GPA_32500 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D GPA_05900 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D GPA_18210 Predicted RNA-binding protein containing a PIN domain K06962 K06962; uncharacterized protein
D GPA_04840 Predicted Zn-dependent protease K06973 K06973; uncharacterized protein
D GPA_24010 putative hydrolase, CocE/NonD family K06978 K06978; uncharacterized protein
D GPA_32490 Predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D GPA_24500 Uncharacterized conserved protein K07005 K07005; uncharacterized protein
D GPA_02390 Predicted membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D GPA_27120 Predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein
D GPA_24210 Predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein
D GPA_25890 Sulfite exporter TauE/SafE. K07090 K07090; uncharacterized protein
D GPA_10500 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D GPA_35090 Putative NADH-flavin reductase K07118 K07118; uncharacterized protein
D GPA_19320 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme K07129 K07129; uncharacterized protein
D GPA_34880 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D GPA_15560 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D GPA_09460 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D GPA_10360 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D GPA_25770 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D GPA_27500 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D GPA_30470 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D GPA_17980 Predicted membrane protein K07149 K07149; uncharacterized protein
D GPA_06380 Zn-ribbon protein, possibly nucleic acid-binding K07164 K07164; uncharacterized protein
D GPA_12790 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D GPA_12680 Uncharacterized conserved protein K08999 K08999; uncharacterized protein
D GPA_28270 Uncharacterized ACR, COG1430. K09005 K09005; uncharacterized protein
D GPA_25240 Uncharacterized ACR, COG1430. K09005 K09005; uncharacterized protein
D GPA_11530 Uncharacterized conserved protein K09117 K09117; uncharacterized protein
D GPA_20690 Uncharacterized conserved protein K09131 K09131; uncharacterized protein
D GPA_09000 Uncharacterized conserved protein K09157 K09157; uncharacterized protein
D GPA_11510 Uncharacterized conserved protein K09167 K09167; uncharacterized protein
D GPA_27700 Ubiquinone biosynthesis protein COQ7. K09700 K09700; uncharacterized protein
D GPA_05260 Uncharacterized protein conserved in bacteria K09768 K09768; uncharacterized protein
D GPA_29270 Uncharacterized protein conserved in bacteria K09790 K09790; uncharacterized protein
D GPA_00670 Uncharacterized protein conserved in bacteria K09803 K09803; uncharacterized protein
D GPA_10300 Uncharacterized protein conserved in bacteria K09861 K09861; uncharacterized protein
D GPA_19480 Uncharacterized protein conserved in bacteria (DUF2064). K09931 K09931; uncharacterized protein
D GPA_07830 Uncharacterized conserved protein K09946 K09946; uncharacterized protein
D GPA_18240 Uncharacterized conserved protein K01163 K01163; uncharacterized protein
D GPA_09180 Phosphate transport regulator (distant homolog of PhoU) K07220 K07220; uncharacterized protein
D GPA_01900 Predicted nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024