+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Gossypium raimondii</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        105787430 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        105803667 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        105772811 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        105762801 DNA-directed RNA polymerases II, IV and V subunit 3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        105779841 DNA-directed RNA polymerases II, IV and V subunit 3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        105766054 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        105790579 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        105774056 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        105778034 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        105800511 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        105769125 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        105789983 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        105775313 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        105787372 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105788564 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105792899 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105799454 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105791201 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        105801778 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        105766229 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        105775720 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        128034665 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        128041806 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        105764280 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        105794642 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        105792169 DNA-directed RNA polymerase IV subunit 1 isoform X1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        105801902 DNA-directed RNA polymerase IV subunit 1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        105772714 DNA-directed RNA polymerase V subunit 1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        105774427 DNA-directed RNA polymerase D subunit 2b	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        105770546 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        105800582 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        105770185 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        105791568 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        105769434 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        105770485 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        105779239 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        105785343 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        105799486 transcription initiation factor IIB-2 isoform X2	K03124 TFIIB; transcription initiation factor TFIIB 
E        105803814 plant-specific TFIIB-related protein 1 isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        105782439 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105792561 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105804750 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105776380 transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        105782547 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        105770122 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        105773392 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        105768499 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        105790062 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        105790091 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        105761801 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        105776198 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        105798108 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        105799761 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        105776474 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        105768652 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        105776694 transcription initiation factor TFIID subunit 10 isoform X2	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        105777000 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        105783741 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        105773155 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        105776895 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        105769227 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        105777289 transcription initiation factor TFIID subunit 13 isoform X1	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        105789628 transcription initiation factor IIE subunit alpha	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        105803480 transcription initiation factor IIE subunit alpha	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        105792189 uncharacterized protein LOC105792189	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        105801912 uncharacterized protein LOC105801912	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        105772943 transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        105770149 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        105778089 uncharacterized protein LOC105778089	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        105784813 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        105793182 general transcription and DNA repair factor IIH subunit TFB1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        105799309 general transcription factor IIH subunit 2 isoform X1	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        105769654 general transcription and DNA repair factor IIH subunit TFB4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        105777878 general transcription and DNA repair factor IIH subunit TFB2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        105789105 general transcription and DNA repair factor IIH helicase subunit XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        105801919 general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        105790737 general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        105803101 general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        105765158 general transcription and DNA repair factor IIH subunit TFB5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        105798645 cyclin-dependent kinase D-3 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        105800070 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        105763532 uncharacterized protein LOC105763532	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        105761033 cyclin-H1-1 isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        105776824 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        105786540 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        105773943 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        105769407 mediator of RNA polymerase II transcription subunit 17 isoform X1	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        105777442 mediator of RNA polymerase II transcription subunit 17 isoform X1	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        105787799 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        105804191 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        105783863 mediator of RNA polymerase II transcription subunit 20a	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        105797001 mediator of RNA polymerase II transcription subunit 22b	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        105764110 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        105761677 mediator of RNA polymerase II transcription subunit 7a	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        105765351 mediator of RNA polymerase II transcription subunit 10b	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        105773090 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        105799276 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        105785542 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        105792585 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        105783556 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        105800207 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        105790716 cyclin-C1-2 isoform X1	K15161 CCNC; cyclin-C 
E        105803316 cyclin-C1-2 isoform X1	K15161 CCNC; cyclin-C 
E        105792739 mediator of RNA polymerase II transcription subunit 13 isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        105794394 mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        105783081 mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        105794155 mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        105786294 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        105762754 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        105795145 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        105762621 mediator of RNA polymerase II transcription subunit 33B	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        105790468 mediator of RNA polymerase II transcription subunit 33B	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        105796621 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        105803084 mediator of RNA polymerase II transcription subunit 33B	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        105803152 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        105787477 uncharacterized protein LOC105787477	K08874 TRRAP; transformation/transcription domain-associated protein 
E        105803715 uncharacterized protein LOC105803715	K08874 TRRAP; transformation/transcription domain-associated protein 
E        105771406 transcriptional adapter ADA2a	K11314 TADA2A; transcriptional adapter 2-alpha 
E        105798923 transcriptional adapter ADA2b isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        105782547 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        105770122 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        105773392 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        105768499 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        105790062 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        105790091 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        105776474 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        105768652 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        105776694 transcription initiation factor TFIID subunit 10 isoform X2	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        105773155 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        105776895 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        105783986 SAGA-associated factor 11	K11363 SGF11; SAGA-associated factor 11 
E        105769190 SAGA-associated factor 29 homolog A	K11364 SGF29; SAGA-associated factor 29 
E        105769213 SAGA-associated factor 29 homolog A	K11364 SGF29; SAGA-associated factor 29 
E        105779469 SAGA-associated factor 29 homolog A	K11364 SGF29; SAGA-associated factor 29 
E        105802431 SAGA-associated factor 29 homolog A	K11364 SGF29; SAGA-associated factor 29 
E        105782494 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        105799363 protein CHROMATIN REMODELING 5 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        105765877 uncharacterized protein LOC105765877 isoform X1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        105769650 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        105779827 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        105772589 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        105775734 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        105783666 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        105791035 ubiquitin C-terminal hydrolase 22 isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        105776696 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
E        105780049 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
E        105799578 uncharacterized protein LOC105799578	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        105763869 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        105802708 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        105768045 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        105799702 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        105764803 SWI/SNF complex subunit SWI3A isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        105770124 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        105770225 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        105779538 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        105795295 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        105797153 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        105764782 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        105769563 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        105777264 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        105798444 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        105782713 actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        105768045 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        105799702 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        105788206 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        105798064 RNA polymerase II transcriptional coactivator KIWI	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        105802335 RNA polymerase II transcriptional coactivator KIWI	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        105779707 protein SHORT ROOT IN SALT MEDIUM 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        105777278 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        105796273 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        105800487 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        105780744 transcription elongation factor SPT4 homolog 2 isoform X1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        105784437 transcription elongation factor SPT4 homolog 1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        105770233 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        105797091 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        105772183 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
E        105776488 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        105766721 uncharacterized protein LOC105766721 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        105766722 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        105766723 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        105773176 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        105798721 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        105783128 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        105763045 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        105773097 uncharacterized protein LOC105773097 isoform X2	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        105761065 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase PP1 isozyme 9	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105769124 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105777123 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105782065 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105788276 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105788778 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105791584 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105792501 serine/threonine-protein phosphatase PP1 isozyme 9	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105796730 serine/threonine-protein phosphatase PP1 isozyme 3	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105800616 serine/threonine-protein phosphatase PP1 isozyme 3	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        105786556 uncharacterized protein LOC105786556 isoform X1	K06100 SYMPK; symplekin 
E        105770758 uncharacterized protein LOC105770758	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        105770030 5'-3' exoribonuclease 3 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        105791991 NAD-capped RNA hydrolase DXO1	K14845 RAI1; RAT1-interacting protein 
E        105780302 uncharacterized protein LOC105780302 isoform X2	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        105785031 uncharacterized protein LOC105785031 isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        105798478 uncharacterized protein LOC105798478 isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        105804378 uncharacterized protein LOC105804378	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        105775259 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        105802169 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        105788017 protein PAF1 homolog isoform X1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        105799064 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        105796663 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        105795499 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        105764704 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        105776939 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        105789004 uncharacterized protein LOC105789004	K15186 EAF; ELL-associated factor 
E        105803621 uncharacterized protein LOC105803621	K15186 EAF; ELL-associated factor 
E        105769033 cyclin-T1-3	K15188 CCNT; cyclin T 
E        105774547 cyclin-T1-4	K15188 CCNT; cyclin T 
E        105776858 cyclin-T1-4	K15188 CCNT; cyclin T 
E        105799006 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        105769033 cyclin-T1-3	K15188 CCNT; cyclin T 
E        105774547 cyclin-T1-4	K15188 CCNT; cyclin T 
E        105776858 cyclin-T1-4	K15188 CCNT; cyclin T 
E        105799006 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        105787910 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        105762832 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        105772770 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        105777953 la-related protein 6A isoform X1	K15191 LARP7; La-related protein 7 
E        105781838 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        105786607 la-related protein 6B isoform X1	K15191 LARP7; La-related protein 7 
E        105795269 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        105769033 cyclin-T1-3	K15188 CCNT; cyclin T 
E        105774547 cyclin-T1-4	K15188 CCNT; cyclin T 
E        105776858 cyclin-T1-4	K15188 CCNT; cyclin T 
E        105799006 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        105782550 TATA-binding protein-associated factor BTAF1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        105786810 protein Dr1 homolog isoform X1	K21751 DR1; down-regulator of transcription 1 
E        105800810 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        105770541 uncharacterized protein LOC105770541	K21752 DRAP1; Dr1-associated corepressor 
E        105772740 uncharacterized protein LOC105772740 isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        105779184 uncharacterized protein LOC105779184	K21752 DRAP1; Dr1-associated corepressor 
E        105787728 uncharacterized protein LOC105787728 isoform X1	K15193 SPTY2D1; protein SPT2 
E        105773355 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        105776978 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        105786568 RNA polymerase II C-terminal domain phosphatase-like 2	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        105779938 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        105796379 RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        105772347 uncharacterized protein C2F7.02c	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105772384 uncharacterized protein LOC105772384	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105774729 uncharacterized protein LOC105774729	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105775132 uncharacterized protein LOC105775132	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105775972 uncharacterized protein LOC105775972	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105776878 uncharacterized protein LOC105776878	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105777668 uncharacterized protein LOC105777668	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105783851 uncharacterized protein LOC105783851	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        105764974 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        105775580 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        105775581 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        105775582 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        105789388 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        105785948 transcriptional elongation regulator MINIYO	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        105794863 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        105761122 uncharacterized protein LOC105761122 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        105766252 MADS-box transcription factor 21	K12412 MCM1; pheromone receptor transcription factor 
E        105771868 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        105771870 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        105771871 agamous-like MADS-box protein AGL29	K12412 MCM1; pheromone receptor transcription factor 
E        105773995 GPN-loop GTPase QQT1 isoform X1	K24104 GPN; GPN-loop GTPase 
E        105790429 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        105800587 GPN-loop GTPase QQT2	K24104 GPN; GPN-loop GTPase 
E        105803365 uncharacterized protein LOC105803365 isoform X2	K24104 GPN; GPN-loop GTPase 
E        105789050 RNA-directed DNA methylation 4	K28237 SLC7A6OS; RNA polymerase II nuclear localization protein 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        105788913 DNA-directed RNA polymerase III subunit 1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        105780069 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        105764210 uncharacterized protein LOC105764210	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105779531 uncharacterized protein LOC105779531	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105786778 uncharacterized protein LOC105786778 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105788499 LOW QUALITY PROTEIN: uncharacterized protein LOC105788499	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105790784 uncharacterized protein LOC105790784	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105793135 uncharacterized protein LOC105793135 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        128035914 uncharacterized protein LOC128035914 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105771034 LOW QUALITY PROTEIN: uncharacterized protein LOC105771034	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        105788753 uncharacterized protein LOC105788753	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        105791873 LOW QUALITY PROTEIN: uncharacterized protein LOC105791873	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        105798517 uncharacterized protein LOC105798517	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        105798538 uncharacterized protein LOC105798538	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        105771231 uncharacterized protein LOC105771231 isoform X2	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        105781790 uncharacterized protein LOC105781790	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        105785249 DNA-directed RNA polymerase III subunit rpc4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        105803822 uncharacterized protein LOC105803822	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        105799763 uncharacterized protein LOC105799763	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        105766668 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        105796680 uncharacterized protein LOC105796680	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        105765689 DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        105791524 DNA-directed RNA polymerase III subunit RPC10 isoform X1	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        105787372 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105788564 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105792899 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105799454 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105791201 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        105801778 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        105766229 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        105775720 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        128034665 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        128041806 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        105764280 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        105794642 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        105767848 transcription factor IIIA isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        105770407 transcription factor IIIA isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        105782439 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105792561 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105804750 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105783331 uncharacterized protein LOC105783331 isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        105803504 plant-specific TFIIB-related protein PTF2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        105803599 uncharacterized protein LOC105803599 isoform X2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        105799169 uncharacterized protein LOC105799169 isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        105773635 uncharacterized protein LOC105773635	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        105779750 uncharacterized protein LOC105779750	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        105804550 uncharacterized protein LOC105804550 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        105765228 uncharacterized protein LOC105765228 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        105791216 uncharacterized protein LOC105791216	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        105761250 uncharacterized protein LOC105761250	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        105791216 uncharacterized protein LOC105791216	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        105765228 uncharacterized protein LOC105765228 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        105770144 uncharacterized protein LOC105770144	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        105765875 snRNA-activating protein complex subunit	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        105800940 uncharacterized protein LOC105800940	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        105788331 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        105777099 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        105764210 uncharacterized protein LOC105764210	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105779531 uncharacterized protein LOC105779531	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105786778 uncharacterized protein LOC105786778 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105788499 LOW QUALITY PROTEIN: uncharacterized protein LOC105788499	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105790784 uncharacterized protein LOC105790784	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105793135 uncharacterized protein LOC105793135 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        128035914 uncharacterized protein LOC128035914 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        105771034 LOW QUALITY PROTEIN: uncharacterized protein LOC105771034	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        105788753 uncharacterized protein LOC105788753	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        105791873 LOW QUALITY PROTEIN: uncharacterized protein LOC105791873	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        105798517 uncharacterized protein LOC105798517	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        105789355 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        105772199 DNA-directed RNA polymerase I subunit RPA12	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        105787372 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105788564 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105792899 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105799454 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        105791201 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        105801778 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        105766229 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        105775720 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        128034665 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        128041806 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        105764280 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        105794642 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        105782439 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105792561 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        105804750 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        105801931 LOW QUALITY PROTEIN: high mobility group B protein 6	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        105788057 uncharacterized protein LOC105788057	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        105795268 uncharacterized protein LOC105795268 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
E        105803885 protein TRI1 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        105780744 transcription elongation factor SPT4 homolog 2 isoform X1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        105784437 transcription elongation factor SPT4 homolog 1	K15171 SUPT4H1; transcription elongation factor SPT4 
E        105770233 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        105797091 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        105776475 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        105796815 ISWI chromatin-remodeling complex ATPase CHR11 isoform X2	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        105800764 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        11538602 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        128037016 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit alpha-like	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        128038443 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        128038746 DNA-directed RNA polymerase subunit alpha-like	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        128038862 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        11538549 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        128036791 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta-like	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        11538544 rpoC2; RNA polymerase beta'' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        11538547 rpoC1; RNA polymerase beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        128035947 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta''-like	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        128039225 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta'-like	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        105792656 RNA polymerase sigma factor sigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        105804315 RNA polymerase sigma factor sigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        105765469 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
E        105773269 RNA polymerase sigma factor sigC isoform X1	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        105779239 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        105785343 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        105799486 transcription initiation factor IIB-2 isoform X2	K03124 TFIIB; transcription initiation factor TFIIB 
E        105803814 plant-specific TFIIB-related protein 1 isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        105789628 transcription initiation factor IIE subunit alpha	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        105803480 transcription initiation factor IIE subunit alpha	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 17, 2025