+D GENES KO
#
KEGG Orthology (KO) - Gallibacterium salpingitidis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:gss00010]
D NYR30_02165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NYR30_05750 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR30_00735 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NYR30_13495 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NYR30_01025 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_02270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_09970 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NYR30_13500 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NYR30_11305 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR30_11625 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR30_05240 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR30_03825 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR30_03830 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_04985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NYR30_12300 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NYR30_08960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR30_09660 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NYR30_04845 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D NYR30_11145 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NYR30_02600 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_02730 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:gss00020]
D NYR30_03430 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NYR30_02370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NYR30_03710 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_09005 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_03435 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NYR30_03440 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_03450 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NYR30_03445 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NYR30_02030 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR30_02035 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR30_02040 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D NYR30_02045 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D NYR30_05995 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NYR30_06565 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR30_11145 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NYR30_03825 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR30_03830 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:gss00030]
D NYR30_02165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR30_13360 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR30_13355 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D NYR30_13345 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NYR30_00185 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NYR30_01035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_09050 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_11765 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_11770 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_01030 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NYR30_09575 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NYR30_12900 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D NYR30_01000 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NYR30_01905 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D NYR30_01060 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D NYR30_01910 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D NYR30_05975 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NYR30_02105 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D NYR30_13545 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NYR30_10730 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR30_10170 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR30_02100 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D NYR30_12730 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D NYR30_13495 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NYR30_05750 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR30_00735 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:gss00040]
D NYR30_12740 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D NYR30_12725 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D NYR30_07850 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D NYR30_09965 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D NYR30_07855 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D NYR30_07860 altronate dehydratase family protein K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D NYR30_09930 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D NYR30_00830 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR30_10705 yiaK; 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D NYR30_10680 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D NYR30_10675 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D NYR30_10670 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D NYR30_10625 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D NYR30_10665 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D NYR30_00185 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NYR30_10620 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D NYR30_10630 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D NYR30_02720 FGGY-family carbohydrate kinase K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D NYR30_10040 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D NYR30_10045 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NYR30_10970 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D NYR30_10965 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D NYR30_10955 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:gss00051]
D NYR30_13620 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NYR30_02070 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NYR30_03980 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NYR30_00825 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NYR30_04020 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NYR30_10970 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D NYR30_10965 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D NYR30_10955 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NYR30_05750 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR30_00735 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NYR30_10590 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D NYR30_01650 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D NYR30_10045 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NYR30_13495 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NYR30_01025 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_02270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_04025 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D NYR30_01000 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NYR30_01645 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NYR30_02050 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D NYR30_02055 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D NYR30_02060 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D NYR30_10585 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:gss00052]
D NYR30_09660 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NYR30_09655 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D NYR30_09650 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D NYR30_03905 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NYR30_00830 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR30_00860 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR30_12200 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D NYR30_10620 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D NYR30_12095 gatA; PTS galactitol transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D NYR30_12090 gatB; PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D NYR30_12085 galactitol-specific PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D NYR30_12080 alcohol dehydrogenase catalytic domain-containing protein K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251]
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NYR30_12105 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D NYR30_12100 gatZ; tagatose-bisphosphate aldolase subunit GatZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D NYR30_13615 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D NYR30_09940 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:gss00053]
D NYR30_10730 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR30_11785 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D NYR30_11780 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D NYR30_11775 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D NYR30_10675 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D NYR30_10670 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D NYR30_10625 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D NYR30_10665 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D NYR30_10705 yiaK; 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D NYR30_10680 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D NYR30_03770 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D NYR30_03785 garL; 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D NYR30_03820 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:gss00500]
D NYR30_13625 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D NYR30_13615 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D NYR30_09940 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NYR30_00830 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR30_05500 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D NYR30_05495 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D NYR30_05510 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NYR30_05490 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D NYR30_05505 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D NYR30_02600 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_02730 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_02165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR30_13620 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:gss00620]
D NYR30_08960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR30_03825 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR30_03830 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_09600 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NYR30_12300 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NYR30_05150 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NYR30_05155 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NYR30_05240 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR30_03325 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NYR30_10265 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NYR30_10260 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NYR30_05035 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NYR30_07020 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D NYR30_04985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NYR30_03170 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D NYR30_05365 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NYR30_06290 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NYR30_10170 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR30_08415 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NYR30_06565 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR30_05995 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NYR30_02030 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR30_02035 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR30_02040 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D NYR30_02045 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D NYR30_04865 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NYR30_11145 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NYR30_02305 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:gss00630]
D NYR30_06565 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR30_03430 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NYR30_02370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NYR30_08960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR30_01280 catalase K03781 katE; catalase [EC:1.11.1.6]
D NYR30_10170 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR30_05895 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D NYR30_00180 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NYR30_09245 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR30_02230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_03790 garR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D NYR30_03795 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NYR30_13545 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NYR30_09140 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D NYR30_09135 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:gss00640]
D NYR30_08960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR30_05150 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NYR30_05155 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_09600 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NYR30_11795 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_03325 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NYR30_10265 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NYR30_10260 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NYR30_05035 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NYR30_03445 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NYR30_03450 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NYR30_01990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NYR30_02370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NYR30_04985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NYR30_07010 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D NYR30_11495 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:gss00650]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_12300 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NYR30_02030 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR30_02035 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR30_02040 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D NYR30_02045 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D NYR30_10255 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR30_09600 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NYR30_00140 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05195 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NYR30_00145 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:gss00660]
D NYR30_00140 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05195 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NYR30_00145 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D NYR30_03445 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NYR30_03450 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NYR30_00510 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D NYR30_02315 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NYR30_02320 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NYR30_02310 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:gss00562]
D NYR30_02945 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NYR30_09925 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NYR30_02960 phospholipase K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D NYR30_10165 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D NYR30_10160 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D NYR30_10155 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D NYR30_01995 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D NYR30_10150 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D NYR30_01990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NYR30_01025 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_02270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:gss00190]
D NYR30_03060 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NYR30_02030 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR30_02035 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR30_02040 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D NYR30_02045 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D NYR30_02865 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NYR30_02860 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D NYR30_02855 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D NYR30_02850 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D NYR30_02845 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D NYR30_02880 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR30_02885 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR30_12455 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NYR30_12465 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NYR30_12460 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NYR30_12450 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NYR30_12470 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NYR30_12435 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NYR30_12445 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NYR30_12440 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NYR30_12155 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:gss00710]
D NYR30_13500 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NYR30_09970 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NYR30_13495 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NYR30_05750 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR30_00735 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NYR30_01035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_09050 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_11765 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_11770 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_12900 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D NYR30_01000 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NYR30_01025 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_02270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_00185 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NYR30_01030 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NYR30_09575 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NYR30_04865 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NYR30_11145 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NYR30_08415 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NYR30_06565 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:gss00720]
D NYR30_04865 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NYR30_06565 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR30_05995 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NYR30_02030 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR30_02035 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR30_02040 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D NYR30_02045 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D NYR30_03450 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NYR30_03445 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NYR30_03710 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_09005 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_02370 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NYR30_03325 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NYR30_10265 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NYR30_10260 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NYR30_05035 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NYR30_03200 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NYR30_03755 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NYR30_05155 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NYR30_05150 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NYR30_08960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:gss00680]
D NYR30_09140 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D NYR30_09135 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D NYR30_02230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR30_05895 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D NYR30_11625 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR30_04865 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NYR30_06565 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR30_13495 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NYR30_05750 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR30_00735 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NYR30_05150 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NYR30_05155 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NYR30_08960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR30_11305 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR30_12905 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR30_02975 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NYR30_07225 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:gss00910]
D NYR30_12015 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D NYR30_12000 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D NYR30_10075 nrfA; ammonia-forming nitrite reductase cytochrome c552 subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D NYR30_00530 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D NYR30_09605 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NYR30_09245 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR30_08890 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NYR30_08885 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D NYR30_06435 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:gss00920]
D NYR30_12560 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D NYR30_12225 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NYR30_12220 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NYR30_12215 TOBE-like domain-containing protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NYR30_12540 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D NYR30_12545 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NYR30_13365 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NYR30_12550 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D NYR30_12535 cysJ; NADPH-dependent assimilatory sulfite reductase flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D NYR30_12530 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D NYR30_12500 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D NYR30_12510 ttrB; tetrathionate reductase subunit TtrB K08358 ttrB; tetrathionate reductase subunit B
D NYR30_12505 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C
D NYR30_11335 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D NYR30_11260 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NYR30_08965 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NYR30_06000 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NYR30_08020 methionine biosynthesis PLP-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NYR30_12475 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D NYR30_12480 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D NYR30_12485 dimethyl sulfoxide reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:gss00061]
D NYR30_03325 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NYR30_10265 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NYR30_10260 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NYR30_05035 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NYR30_11130 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D NYR30_11905 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D NYR30_11910 acyl carrier protein K02078 acpP; acyl carrier protein
D NYR30_11120 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR30_11115 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR30_07205 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR30_11865 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR30_11880 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NYR30_11125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_11875 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_06240 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D NYR30_09380 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NYR30_02115 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NYR30_03675 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_06510 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:gss00071]
D NYR30_10315 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_03675 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_06510 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_12300 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D NYR30_11130 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D NYR30_11905 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D NYR30_11910 acyl carrier protein K02078 acpP; acyl carrier protein
D NYR30_11120 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:gss00561]
D NYR30_03795 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NYR30_00965 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D NYR30_00970 dhaL; dihydroxyacetone kinase subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D NYR30_09735 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NYR30_02020 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NYR30_11110 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NYR30_06110 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NYR30_08540 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NYR30_13435 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NYR30_12200 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:gss00564]
D NYR30_11255 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D NYR30_00065 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D NYR30_00070 glpB; glycerol-3-phosphate dehydrogenase subunit GlpB K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D NYR30_00075 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D NYR30_02020 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NYR30_06110 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NYR30_08540 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NYR30_13435 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NYR30_00950 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D NYR30_13140 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D NYR30_00840 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D NYR30_10325 class I SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D NYR30_09405 CDP-archaeol synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D NYR30_11525 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NYR30_11095 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D NYR30_09280 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D NYR30_04675 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D NYR30_04590 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:gss00565]
D NYR30_00950 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:gss00600]
D NYR30_00860 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR30_12200 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D NYR30_00950 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D NYR30_00950 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:gss00592]
D NYR30_00950 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D NYR30_10315 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D NYR30_09510 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:gss00230]
D NYR30_10335 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D NYR30_13370 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D NYR30_01910 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D NYR30_05975 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NYR30_06535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NYR30_02225 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D NYR30_03340 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NYR30_01095 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D NYR30_12670 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D NYR30_03345 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D NYR30_04880 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D NYR30_04885 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D NYR30_02665 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D NYR30_11640 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NYR30_02220 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NYR30_08645 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NYR30_11035 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NYR30_12395 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NYR30_01915 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D NYR30_02795 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NYR30_06005 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D NYR30_06950 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NYR30_02200 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NYR30_12890 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D NYR30_03085 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D NYR30_06935 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NYR30_01385 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D NYR30_10515 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D NYR30_05170 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NYR30_05165 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NYR30_02605 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D NYR30_05840 anti-phage deoxyguanosine triphosphatase K01129 dgt; dGTPase [EC:3.1.5.1]
D NYR30_10505 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NYR30_04625 HD domain-containing protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D NYR30_11330 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D NYR30_13430 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D NYR30_04810 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D NYR30_02780 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NYR30_05445 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D NYR30_08715 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D NYR30_03895 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NYR30_10830 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR30_10330 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D NYR30_01230 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D NYR30_12540 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D NYR30_12545 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:gss00240]
D NYR30_01285 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NYR30_01290 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NYR30_04895 pyrD; quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D NYR30_12655 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D NYR30_09720 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D NYR30_09425 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D NYR30_02200 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NYR30_10830 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR30_13085 pyrG; CTP synthase (glutamine hydrolyzing) K01937 pyrG; CTP synthase [EC:6.3.4.2]
D NYR30_09695 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D NYR30_03215 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D NYR30_11035 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NYR30_12395 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NYR30_11375 yjjG; pyrimidine 5'-nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D NYR30_01515 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D NYR30_03350 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D NYR30_01250 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D NYR30_08715 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D NYR30_05445 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D NYR30_05710 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D NYR30_05550 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NYR30_02605 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D NYR30_03220 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D NYR30_05170 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NYR30_05165 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NYR30_08010 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D NYR30_10905 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NYR30_01815 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NYR30_08795 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:gss00250]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_13510 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D NYR30_01600 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR30_12720 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR30_01560 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D NYR30_02150 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NYR30_12125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NYR30_02780 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NYR30_11640 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NYR30_10255 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR30_08890 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NYR30_08885 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D NYR30_09605 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NYR30_09835 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NYR30_09245 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR30_01285 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NYR30_01290 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NYR30_09030 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR30_06535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:gss00260]
D NYR30_04780 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NYR30_02350 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR30_01415 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D NYR30_00805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR30_02355 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D NYR30_02360 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NYR30_02230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR30_05895 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D NYR30_10170 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR30_03795 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NYR30_11305 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR30_12905 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR30_02975 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NYR30_07225 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D NYR30_08795 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_11950 aminopeptidase P family N-terminal domain-containing protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D NYR30_11525 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NYR30_13340 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D NYR30_13335 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D NYR30_05205 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NYR30_00160 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NYR30_09165 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR30_05300 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NYR30_05305 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NYR30_01920 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D NYR30_01925 aspartate aminotransferase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:gss00270]
D NYR30_11260 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NYR30_08965 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NYR30_10115 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NYR30_04085 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NYR30_08820 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NYR30_09345 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D NYR30_02795 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NYR30_02445 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D NYR30_01100 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D NYR30_04780 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NYR30_02350 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR30_01415 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D NYR30_00805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR30_02355 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D NYR30_06000 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NYR30_08020 methionine biosynthesis PLP-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NYR30_06545 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR30_02275 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_04985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NYR30_09165 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR30_06565 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR30_05205 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NYR30_12905 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR30_02975 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:gss00280]
D NYR30_06545 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_10315 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D NYR30_01990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:gss00290]
D NYR30_00160 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NYR30_02315 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NYR30_02320 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NYR30_02310 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D NYR30_00140 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05195 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NYR30_00145 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D NYR30_10655 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NYR30_00155 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NYR30_06545 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR30_12720 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR30_02305 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:gss00300]
D NYR30_04780 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NYR30_02350 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR30_01415 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D NYR30_00805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR30_09175 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NYR30_02130 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D NYR30_08900 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D NYR30_04070 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NYR30_09675 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NYR30_09480 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NYR30_00935 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NYR30_07805 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NYR30_07800 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:gss00310]
D NYR30_02545 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D NYR30_02535 aspartate aminotransferase family protein K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39]
D NYR30_03440 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_09165 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR30_10255 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR30_02540 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D NYR30_02555 FAD-binding oxidoreductase K26065 amaA; L-pipecolate oxidase
C 00220 Arginine biosynthesis [PATH:gss00220]
D NYR30_11410 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D NYR30_02150 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NYR30_12125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NYR30_01090 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D NYR30_11975 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D NYR30_09245 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR30_01285 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NYR30_01290 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NYR30_09605 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_12720 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR30_02675 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D NYR30_12130 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D NYR30_12135 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D NYR30_04070 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NYR30_12140 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:gss00330]
D NYR30_05550 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NYR30_11950 aminopeptidase P family N-terminal domain-containing protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D NYR30_12835 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D NYR30_12840 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D NYR30_01090 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D NYR30_11975 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D NYR30_01670 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D NYR30_13450 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D NYR30_09835 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NYR30_00645 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NYR30_00640 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:gss00340]
D NYR30_01885 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D NYR30_09185 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D NYR30_09195 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D NYR30_09200 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D NYR30_09190 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D NYR30_09210 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D NYR30_02970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_09235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_01880 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:gss00350]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_02970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_09235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_12300 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NYR30_10190 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D NYR30_10185 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D NYR30_10230 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D NYR30_10225 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D NYR30_10235 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D NYR30_10215 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D NYR30_10220 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D NYR30_10245 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D NYR30_10250 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D NYR30_10255 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR30_01085 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:gss00360]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_02970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_09235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:gss00380]
D NYR30_03440 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_01280 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gss00400]
D NYR30_05815 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR30_05875 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR30_10390 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D NYR30_10270 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D NYR30_12255 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NYR30_12325 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NYR30_10395 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D NYR30_02965 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D NYR30_08665 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D NYR30_05325 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NYR30_05320 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NYR30_05315 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D NYR30_05310 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D NYR30_05300 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NYR30_05305 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NYR30_05820 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D NYR30_00120 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_02970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_09235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:gss00410]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_01990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:gss00430]
D NYR30_02495 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_03740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_05155 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NYR30_05150 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:gss00450]
D NYR30_08020 methionine biosynthesis PLP-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NYR30_10115 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NYR30_04085 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NYR30_06205 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NYR30_12540 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D NYR30_12545 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NYR30_03640 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D NYR30_12055 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D NYR30_06080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:gss00460]
D NYR30_02495 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_03740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_13510 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D NYR30_02230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:gss00470]
D NYR30_02160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NYR30_07770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR30_09165 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR30_10490 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NYR30_07790 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NYR30_09480 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NYR30_00935 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:gss00480]
D NYR30_02495 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_03740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_02275 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D NYR30_06100 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NYR30_02195 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D NYR30_04890 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NYR30_03090 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D NYR30_05335 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR30_03480 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D NYR30_03710 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_09005 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_13345 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NYR30_13360 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:gss00520]
D NYR30_12795 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D NYR30_02600 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_02730 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_12790 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D NYR30_04940 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D NYR30_04935 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D NYR30_09560 nagK; N-acetylglucosamine kinase K28207 nagK; N-acetylglucosamine kinase [EC:2.7.1.59]
D NYR30_11505 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D NYR30_00195 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NYR30_13075 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NYR30_13440 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NYR30_02640 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NYR30_01720 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D NYR30_07190 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D NYR30_01725 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D NYR30_09030 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR30_13620 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NYR30_02165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR30_02070 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NYR30_03980 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NYR30_10070 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NYR30_00830 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR30_09655 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D NYR30_09650 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D NYR30_03905 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NYR30_02050 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D NYR30_02055 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D NYR30_02060 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D NYR30_00825 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NYR30_05500 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00541 Biosynthesis of various nucleotide sugars [PATH:gss00541]
D NYR30_00195 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NYR30_05695 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D NYR30_05900 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NYR30_05690 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D NYR30_09290 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NYR30_04940 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D NYR30_04955 nanA; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D NYR30_07145 GDSL-type esterase/lipase family protein K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D NYR30_03080 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D NYR30_02465 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D NYR30_05780 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D NYR30_02375 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D NYR30_00830 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR30_04030 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NYR30_03980 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NYR30_04020 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NYR30_04025 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:gss00511]
D NYR30_00860 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:gss00540]
D NYR30_09375 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NYR30_07750 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NYR30_09385 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NYR30_08535 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NYR30_09370 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NYR30_09300 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NYR30_01155 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NYR30_05775 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NYR30_08650 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D NYR30_10850 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D NYR30_01165 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D NYR30_02380 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D NYR30_03965 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:gss00542]
D NYR30_08865 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:gss00550]
D NYR30_13075 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NYR30_13440 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NYR30_07775 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NYR30_07790 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NYR30_07805 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NYR30_07770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR30_07800 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NYR30_09410 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NYR30_09585 bacA; undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR30_07795 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NYR30_07780 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NYR30_08790 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_10420 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR30_05025 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NYR30_07785 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_00605 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_00610 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NYR30_07810 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NYR30_00595 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NYR30_06530 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:gss00552]
D NYR30_09585 bacA; undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR30_08865 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NYR30_10295 phosphotransferase K25657 licA; choline kinase [EC:2.7.1.32]
D NYR30_10305 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D NYR30_08865 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:gss00543]
D NYR30_08865 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NYR30_11260 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:gss00730]
D NYR30_12600 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D NYR30_09910 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NYR30_05260 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D NYR30_05245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NYR30_12605 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D NYR30_04680 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D NYR30_02580 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NYR30_03895 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NYR30_12585 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:gss00740]
D NYR30_09565 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NYR30_03605 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NYR30_09495 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D NYR30_13220 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D NYR30_04690 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D NYR30_05290 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D NYR30_13305 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D NYR30_03135 aphA; acid phosphatase AphA K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D NYR30_10185 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D NYR30_10335 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D NYR30_08995 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:gss00750]
D NYR30_03330 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D NYR30_02975 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NYR30_00960 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D NYR30_02360 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NYR30_09535 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D NYR30_09530 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:gss00760]
D NYR30_01915 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D NYR30_13210 nadR; multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D NYR30_11035 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NYR30_12395 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NYR30_10830 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR30_01210 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D NYR30_09550 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D NYR30_08725 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D NYR30_05945 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NYR30_08910 pntA; Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NYR30_08905 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D NYR30_10255 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:gss00770]
D NYR30_00140 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05195 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR30_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NYR30_00145 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D NYR30_10655 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NYR30_00155 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NYR30_13105 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D NYR30_10910 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D NYR30_10830 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR30_01160 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D NYR30_09115 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D NYR30_10345 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D NYR30_06545 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:gss00780]
D NYR30_03875 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D NYR30_07205 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR30_11865 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR30_11880 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NYR30_11125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_11875 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_09380 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NYR30_02115 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NYR30_03870 DUF452 family protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D NYR30_03865 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NYR30_03850 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NYR30_04785 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NYR30_05055 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NYR30_03950 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D NYR30_10010 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:gss00785]
D NYR30_00585 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D NYR30_00580 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_03825 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR30_03830 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NYR30_03435 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NYR30_03440 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:gss00790]
D NYR30_03625 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NYR30_06255 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D NYR30_06105 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D NYR30_09335 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D NYR30_07195 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D NYR30_00125 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NYR30_05980 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D NYR30_09565 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NYR30_10980 anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D NYR30_01200 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D NYR30_01205 aminotransferase class IV family protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D NYR30_05405 folX; dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D NYR30_05115 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D NYR30_02670 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NYR30_05440 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NYR30_05125 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NYR30_05130 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NYR30_05140 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NYR30_02660 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NYR30_07210 moeA; molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D NYR30_01940 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:gss00670]
D NYR30_00125 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NYR30_05115 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D NYR30_03200 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NYR30_02230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR30_03340 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NYR30_02220 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NYR30_01815 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NYR30_03755 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NYR30_01475 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D NYR30_08820 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_13340 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D NYR30_13335 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:gss00860]
D NYR30_12825 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR30_02935 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D NYR30_08870 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NYR30_03125 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NYR30_04815 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D NYR30_04820 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D NYR30_01215 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D NYR30_07890 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D NYR30_13285 hemG; menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D NYR30_06070 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NYR30_04825 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D NYR30_12555 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D NYR30_02865 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NYR30_05730 hutZ; heme utilization protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gss00130]
D NYR30_10495 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D NYR30_13160 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NYR30_09580 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D NYR30_01505 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D NYR30_07135 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D NYR30_01500 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D NYR30_03095 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D NYR30_07700 FAD-dependent monooxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D NYR30_12715 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D NYR30_12710 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D NYR30_09995 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D NYR30_01575 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D NYR30_08675 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D NYR30_10000 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D NYR30_06065 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D NYR30_10875 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D NYR30_06015 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:gss00900]
D NYR30_05245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NYR30_09415 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D NYR30_12385 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D NYR30_05970 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D NYR30_12390 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D NYR30_03285 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D NYR30_13320 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D NYR30_05250 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NYR30_11165 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NYR30_09410 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:gss00907]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR30_10315 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D NYR30_01035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_09050 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_11765 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR30_11770 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D NYR30_04030 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D NYR30_12715 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D NYR30_04030 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:gss00332]
D NYR30_00645 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NYR30_00640 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:gss00261]
D NYR30_12540 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D NYR30_12545 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NYR30_04780 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NYR30_02350 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR30_01415 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D NYR30_00805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR30_09175 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NYR30_02130 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:gss00521]
D NYR30_02945 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NYR30_09925 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NYR30_10165 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D NYR30_04030 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D NYR30_04030 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:gss00401]
D NYR30_05820 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_02970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_09235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D NYR30_05325 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NYR30_05320 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D NYR30_11120 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR30_11125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_11875 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_02115 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D NYR30_11130 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D NYR30_11905 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D NYR30_11910 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:gss00999]
D NYR30_08820 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NYR30_12255 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NYR30_12325 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:gss00362]
D NYR30_10315 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D NYR30_00505 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D NYR30_00520 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D NYR30_00515 amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D NYR30_00510 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D NYR30_09885 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00627 Aminobenzoate degradation [PATH:gss00627]
D NYR30_07020 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D NYR30_00505 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D NYR30_00810 UbiX family flavin prenyltransferase K22959 lpdB; gallate decarboxylase subunit B
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:gss00625]
D NYR30_12300 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D NYR30_10315 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:gss00930]
D NYR30_10730 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR30_10320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:gss00626]
D NYR30_12300 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:gss00984]
D NYR30_10315 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:gss03020]
D NYR30_00725 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NYR30_00730 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NYR30_13060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NYR30_10510 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:gss03010]
D NYR30_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_02470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_08845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_10480 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_11705 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_12675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_02485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_08835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_10465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_11695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_12690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_00020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_00025 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_02490 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_08830 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_10460 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_11690 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_12695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_09700 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NYR30_09435 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NYR30_12950 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NYR30_13055 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NYR30_13020 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NYR30_01175 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NYR30_10785 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NYR30_13005 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NYR30_02995 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NYR30_12915 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NYR30_13050 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NYR30_10790 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NYR30_13045 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NYR30_13000 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NYR30_02840 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NYR30_11030 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NYR30_12965 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NYR30_01185 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NYR30_12940 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NYR30_13290 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NYR30_10535 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NYR30_00710 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NYR30_12935 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NYR30_12920 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NYR30_12925 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NYR30_12995 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NYR30_13010 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NYR30_01190 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NYR30_00715 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NYR30_00705 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NYR30_00720 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NYR30_03000 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NYR30_12985 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NYR30_13030 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NYR30_12955 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NYR30_13065 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NYR30_13015 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NYR30_11015 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NYR30_03520 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NYR30_11160 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NYR30_12945 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NYR30_12930 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NYR30_12990 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NYR30_05045 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D NYR30_11155 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NYR30_12770 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NYR30_12960 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NYR30_13025 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NYR30_02415 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NYR30_08705 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NYR30_11105 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NYR30_12775 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NYR30_01445 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NYR30_03515 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NYR30_08710 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NYR30_13040 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:gss00970]
D NYR30_02480 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_10470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_12685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_12830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_03210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_08860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_10755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_10760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_11605 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_08530 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NYR30_11655 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NYR30_00030 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR30_03230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR30_03235 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR30_08045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NYR30_01700 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR30_01705 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR30_00010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR30_08840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR30_11700 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR30_02565 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_02570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_08025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_08035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_13120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_08855 tRNA-His K14226 tRNA-His; tRNA His
D NYR30_02475 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_04230 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_06845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_08285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_10475 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_12680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_01710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_04100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_05805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_08030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_08040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_10435 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_10440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_10445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_10450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_01715 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR30_05645 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR30_06495 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR30_07245 tRNA-Ile K14230 tRNA-Met; tRNA Met
D NYR30_11660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NYR30_03205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR30_08850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR30_06455 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_07055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_09825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_10765 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_13110 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR30_13125 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR30_00035 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NYR30_04300 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NYR30_13115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NYR30_05340 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12805 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12810 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12815 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12820 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12060 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D NYR30_12825 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR30_03745 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NYR30_00815 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NYR30_06265 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR30_05270 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NYR30_01730 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NYR30_01750 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NYR30_03630 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NYR30_05610 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NYR30_12055 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D NYR30_00760 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NYR30_06080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NYR30_12375 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NYR30_08610 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NYR30_10350 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR30_13310 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NYR30_01315 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NYR30_02180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR30_00910 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NYR30_03280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NYR30_05465 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NYR30_05460 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NYR30_08930 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR30_00175 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:gss03008]
D NYR30_11720 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NYR30_02575 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:gss03060]
D NYR30_13035 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR30_00695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR30_05810 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR30_07715 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NYR30_07720 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NYR30_07710 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR30_01430 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR30_10370 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR30_11295 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR30_08760 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NYR30_06370 ffs; signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D NYR30_11805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR30_03110 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D NYR30_03115 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D NYR30_03120 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D NYR30_11725 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NYR30_13315 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D NYR30_10920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:gss04122]
D NYR30_09910 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NYR30_13270 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D NYR30_10795 sulfurtransferase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D NYR30_10800 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D NYR30_10805 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D NYR30_07045 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D NYR30_13605 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NYR30_05140 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NYR30_05125 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NYR30_05135 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D NYR30_07215 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D NYR30_05130 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NYR30_02660 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NYR30_05260 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:gss03018]
D NYR30_01800 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NYR30_01470 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NYR30_00625 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D NYR30_11625 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR30_00055 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NYR30_11265 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NYR30_00045 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NYR30_00955 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NYR30_00630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NYR30_08510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR30_01570 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR30_02500 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR30_09330 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:gss03030]
D NYR30_06180 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08485 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_11545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR30_08640 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR30_08005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR30_10360 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR30_03615 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NYR30_08625 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR30_01455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR30_02155 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR30_04260 AAA family ATPase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR30_07255 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR30_10540 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NYR30_07280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11965 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_06185 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NYR30_09365 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NYR30_01545 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR30_07240 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:gss03410]
D NYR30_01760 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NYR30_03035 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR30_11675 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NYR30_11150 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NYR30_01610 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NYR30_05000 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NYR30_03130 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR30_05785 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D NYR30_07065 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D NYR30_01545 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR30_09355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR30_07240 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:gss03420]
D NYR30_05625 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NYR30_11840 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NYR30_08440 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D NYR30_09285 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D NYR30_12260 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR30_01545 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR30_07240 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:gss03430]
D NYR30_11405 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NYR30_02510 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D NYR30_03920 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D NYR30_12260 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR30_03715 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D NYR30_10030 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NYR30_05255 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NYR30_09355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR30_07280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11965 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR30_01455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR30_08640 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR30_10360 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR30_08005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR30_06180 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08485 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08625 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR30_03615 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NYR30_07240 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NYR30_10385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:gss03440]
D NYR30_09355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR30_07280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11965 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_01460 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NYR30_13410 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NYR30_08630 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D NYR30_11400 recA; recombinase RecA K03553 recA; recombination protein RecA
D NYR30_01545 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR30_03500 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NYR30_03505 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NYR30_06245 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NYR30_10500 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NYR30_05375 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D NYR30_10735 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D NYR30_05370 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D NYR30_11545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR30_01455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR30_08640 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR30_10360 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR30_08005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR30_06180 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08485 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08625 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR30_03615 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NYR30_02420 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NYR30_01180 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D NYR30_02175 primosomal replication protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:gss02010]
D NYR30_12560 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D NYR30_12225 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NYR30_12220 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NYR30_12215 TOBE-like domain-containing protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NYR30_12590 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D NYR30_12580 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D NYR30_12575 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D NYR30_06410 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NYR30_06420 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D NYR30_06415 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NYR30_06040 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D NYR30_00780 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR30_02075 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR30_03150 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR30_00790 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NYR30_02080 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NYR30_03145 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NYR30_00785 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_00795 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_02085 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_03140 fbpC; ferric ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_03935 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D NYR30_03940 thiP; thiamine/thiamine pyrophosphate ABC transporter permease K02063 thiP; thiamine transport system permease protein
D NYR30_03945 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D NYR30_04600 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NYR30_13070 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NYR30_04630 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D NYR30_04635 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D NYR30_04640 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D NYR30_13175 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NYR30_11560 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D NYR30_11565 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NYR30_11570 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NYR30_11555 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D NYR30_11575 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NYR30_01065 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D NYR30_10725 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D NYR30_01070 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D NYR30_10720 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D NYR30_01075 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NYR30_10715 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NYR30_01080 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D NYR30_10635 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D NYR30_10645 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein
D NYR30_10640 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D NYR30_09630 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D NYR30_09635 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D NYR30_10050 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D NYR30_10060 gguB; sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D NYR30_10055 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D NYR30_08490 substrate-binding domain-containing protein K17213 K17213; inositol transport system substrate-binding protein
D NYR30_08500 ABC transporter permease K17214 K17214; inositol transport system permease protein
D NYR30_08495 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D NYR30_12270 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR30_12275 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D NYR30_12280 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D NYR30_12285 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NYR30_02240 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D NYR30_02250 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein
D NYR30_02245 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein
D NYR30_02235 artP; arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D NYR30_00870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_00875 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_00880 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D NYR30_00885 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D NYR30_02450 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D NYR30_02455 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D NYR30_02460 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D NYR30_03645 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03650 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03655 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D NYR30_03660 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D NYR30_03665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D NYR30_03670 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D NYR30_01875 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D NYR30_09840 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D NYR30_09845 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D NYR30_09850 dppC; dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein
D NYR30_09855 dppD; dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D NYR30_09860 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D NYR30_07680 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D NYR30_07675 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein
D NYR30_07670 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D NYR30_07665 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D NYR30_07660 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D NYR30_10995 Fe(3+) dicitrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D NYR30_11005 fecD; Fe(3+) dicitrate ABC transporter permease subunit FecD K23182 fecD; ferric citrate transport system permease protein
D NYR30_11000 fecC; iron-dicitrate ABC transporter permease FecC K23183 fecC; ferric citrate transport system permease protein
D NYR30_11010 fecE; Fe(3+) dicitrate ABC transporter ATP-binding protein FecE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D NYR30_05070 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D NYR30_05075 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D NYR30_05065 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D NYR30_08565 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D NYR30_05010 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D NYR30_05015 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NYR30_07040 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D NYR30_07030 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D NYR30_07025 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D NYR30_07035 ATP-binding cassette domain-containing protein K11607 sitB; manganese/iron transport system ATP-binding protein
D NYR30_03995 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D NYR30_04000 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NYR30_05880 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein
D NYR30_05890 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D NYR30_05885 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NYR30_01835 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D NYR30_01830 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D NYR30_01825 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NYR30_01820 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NYR30_06095 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D NYR30_06090 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D NYR30_11590 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NYR30_11815 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NYR30_11810 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NYR30_09305 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NYR30_10835 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D NYR30_11205 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D NYR30_06195 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NYR30_06200 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D NYR30_03730 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D NYR30_10180 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D NYR30_13535 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:gss02060]
D NYR30_02595 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D NYR30_02590 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D NYR30_02600 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_02730 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_11505 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D NYR30_13625 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D NYR30_10585 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D NYR30_02050 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D NYR30_02055 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D NYR30_02060 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D NYR30_12095 gatA; PTS galactitol transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D NYR30_12090 gatB; PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D NYR30_12085 galactitol-specific PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D NYR30_11785 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D NYR30_11780 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D NYR30_11775 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D NYR30_01655 fruB; fused PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D NYR30_01645 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NYR30_01650 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D NYR30_11595 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:gss03070]
D NYR30_07715 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NYR30_07720 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NYR30_00695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR30_05810 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR30_13035 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR30_07710 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR30_01430 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR30_10370 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR30_11805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR30_11295 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR30_08760 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NYR30_03110 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D NYR30_03115 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D NYR30_03120 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:gss02020]
D NYR30_12295 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NYR30_12290 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NYR30_12270 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR30_10130 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D NYR30_10125 cpxR; envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D NYR30_09990 ATP-binding protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D NYR30_08940 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D NYR30_00985 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D NYR30_01450 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NYR30_01660 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NYR30_09500 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NYR30_11985 narQ; nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D NYR30_04805 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D NYR30_09145 fdnG; formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D NYR30_02030 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR30_02035 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR30_02040 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D NYR30_02045 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D NYR30_02950 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D NYR30_03255 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D NYR30_08765 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D NYR30_03250 uhpB; signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D NYR30_03245 uhpA; transcriptional regulator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D NYR30_03240 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D NYR30_00820 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D NYR30_13525 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D NYR30_05230 glnD; bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D NYR30_02650 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D NYR30_09245 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR30_00775 ABC transporter substrate-binding protein K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D NYR30_00770 ATP-binding protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D NYR30_00765 sigma-54 dependent transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D NYR30_00500 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D NYR30_01005 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_01380 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_04775 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_07845 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_09955 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10200 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10560 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10565 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10685 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_12745 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_01010 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_01375 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_07840 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_09950 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10205 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10555 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10570 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10695 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_12750 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_01015 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_01370 dctM; C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein
D NYR30_07835 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_09945 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_10210 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_10550 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_10690 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D NYR30_12755 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_04770 TRAP transporter large permease subunit K21393 dctQM; TRAP-type transport system permease protein
D NYR30_12515 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D NYR30_12520 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D NYR30_12500 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D NYR30_12510 ttrB; tetrathionate reductase subunit TtrB K08358 ttrB; tetrathionate reductase subunit B
D NYR30_12505 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C
D NYR30_10890 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NYR30_02880 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR30_02885 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR30_01360 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:gss04146]
D NYR30_03675 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_06510 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_01210 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D NYR30_03710 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_09005 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR30_01280 catalase K03781 katE; catalase [EC:1.11.1.6]
D NYR30_03305 sodA; superoxide dismutase [Mn] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D NYR30_01090 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D NYR30_11975 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:gss02024]
D NYR30_01100 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D NYR30_02500 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR30_04860 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D NYR30_05325 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NYR30_05320 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NYR30_05815 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR30_05875 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR30_03675 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_06510 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_10890 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NYR30_09565 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NYR30_03605 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NYR30_02655 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NYR30_02695 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NYR30_02700 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NYR30_03645 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03650 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03655 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D NYR30_03660 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D NYR30_03665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D NYR30_03670 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D NYR30_02810 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NYR30_12105 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D NYR30_01430 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR30_00695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR30_05810 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR30_13035 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR30_07710 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR30_10370 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR30_11805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR30_11295 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR30_08760 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:gss02030]
D NYR30_01065 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D NYR30_10725 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D NYR30_01875 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D NYR30_09840 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:gss02040]
D NYR30_00870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_00875 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_10545 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D NYR30_11625 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:gss04981]
D NYR30_01475 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D NYR30_00125 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NYR30_02230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR30_01815 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:gss01501]
D NYR30_03900 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NYR30_02640 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NYR30_03645 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03650 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03655 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D NYR30_03660 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D NYR30_03665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D NYR30_03670 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D NYR30_03405 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D NYR30_03400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR30_03395 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR30_10420 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR30_00610 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NYR30_07810 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:gss01502]
D NYR30_07770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR30_02160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NYR30_07800 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NYR30_07795 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NYR30_07780 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:gss01503]
D NYR30_10850 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D NYR30_07680 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D NYR30_07675 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein
D NYR30_07670 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D NYR30_07665 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D NYR30_07660 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D NYR30_10130 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D NYR30_10125 cpxR; envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D NYR30_02515 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR30_01950 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR30_09350 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR30_03400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR30_03395 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR30_09375 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:gss01000]
C 01001 Protein kinases [BR:gss01001]
D NYR30_05525 HipA N-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D NYR30_06220 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D NYR30_12295 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NYR30_10130 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D NYR30_09990 ATP-binding protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D NYR30_03065 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NYR30_11985 narQ; nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D NYR30_03250 uhpB; signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D NYR30_00770 ATP-binding protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D NYR30_12515 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:gss01009]
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NYR30_10920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D NYR30_07225 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:gss01002]
D NYR30_13315 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D NYR30_09095 prepilin peptidase K02506 hofD; leader peptidase HopD [EC:3.4.23.43]
D NYR30_06935 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NYR30_07070 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D NYR30_05450 NlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC
D NYR30_06535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NYR30_08890 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NYR30_09030 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR30_01600 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR30_01110 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D NYR30_06300 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D NYR30_04890 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NYR30_10140 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D NYR30_06755 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D NYR30_08210 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D NYR30_06100 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NYR30_02195 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D NYR30_09675 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NYR30_00535 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D NYR30_04645 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D NYR30_09040 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D NYR30_03090 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D NYR30_05020 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D NYR30_05225 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NYR30_13275 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D NYR30_01495 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NYR30_08805 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NYR30_06445 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D NYR30_09400 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D NYR30_08660 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D NYR30_08875 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D NYR30_05835 degS; outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D NYR30_00655 prolyl oligopeptidase family serine peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D NYR30_00595 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NYR30_06530 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NYR30_01680 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NYR30_03840 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D NYR30_06235 Lon protease family protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D NYR30_02025 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NYR30_11725 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NYR30_06340 prc; carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NYR30_05830 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D NYR30_04650 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D NYR30_13150 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D NYR30_05705 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NYR30_06720 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D NYR30_05855 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D NYR30_02495 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_03740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR30_06175 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D NYR30_03315 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D NYR30_04075 tldD; metalloprotease TldD K03568 tldD; TldD protein
D NYR30_02775 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D NYR30_02770 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:gss01003]
D NYR30_05495 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D NYR30_08790 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_05025 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NYR30_10420 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR30_07785 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_00605 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_08865 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:gss01005]
D NYR30_09375 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NYR30_09370 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NYR30_07750 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NYR30_09385 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NYR30_08535 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NYR30_09300 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NYR30_05775 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NYR30_08650 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D NYR30_01155 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NYR30_10850 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D NYR30_01165 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D NYR30_05900 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NYR30_09290 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NYR30_05690 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D NYR30_05695 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D NYR30_02380 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D NYR30_03965 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D NYR30_01170 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D NYR30_03080 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D NYR30_02465 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D NYR30_05780 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D NYR30_02375 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D NYR30_08865 wecA; UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:gss01011]
D NYR30_13075 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NYR30_13440 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NYR30_07775 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NYR30_07790 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NYR30_07805 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NYR30_07770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR30_02160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NYR30_10490 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NYR30_05705 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NYR30_07795 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NYR30_07780 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NYR30_09585 bacA; undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR30_13295 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NYR30_10420 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR30_05025 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NYR30_00610 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NYR30_07810 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NYR30_00595 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NYR30_06530 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NYR30_08790 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_07785 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_00605 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_06300 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D NYR30_08660 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D NYR30_07070 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D NYR30_05020 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D NYR30_06755 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D NYR30_08210 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D NYR30_08780 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NYR30_05640 mltA; murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D NYR30_07115 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D NYR30_11665 mltC; membrane-bound lytic murein transglycosylase MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D NYR30_12665 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D NYR30_08015 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D NYR30_00600 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NYR30_02515 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR30_09075 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:gss01004]
D NYR30_11120 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR30_11115 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR30_07205 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR30_11865 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR30_11880 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NYR30_11125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_11875 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR30_06240 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D NYR30_09380 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NYR30_02115 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NYR30_09510 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D NYR30_08960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR30_03675 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_06510 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_02020 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NYR30_11110 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NYR30_06110 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NYR30_08540 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:gss01006]
D NYR30_05250 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NYR30_11165 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NYR30_09410 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NYR30_02505 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NYR30_10875 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D NYR30_13160 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NYR30_02865 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:gss01007]
D NYR30_12825 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR30_03745 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NYR30_08930 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR30_00175 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NYR30_00760 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NYR30_02180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR30_06080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NYR30_13310 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NYR30_08610 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NYR30_10350 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR30_01315 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NYR30_06265 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR30_05270 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NYR30_03280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NYR30_01730 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NYR30_01750 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NYR30_05610 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NYR30_00910 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NYR30_03630 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NYR30_00815 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NYR30_05465 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NYR30_05460 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NYR30_04875 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NYR30_12720 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR30_02970 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_09235 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR30_03865 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NYR30_01670 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D NYR30_04070 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NYR30_01920 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D NYR30_03850 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NYR30_08870 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NYR30_06545 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR30_02975 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:gss00194]
D NYR30_12470 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NYR30_12465 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NYR30_12460 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NYR30_12455 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NYR30_12450 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NYR30_12445 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NYR30_12440 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NYR30_12435 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NYR30_12430 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:gss03000]
D NYR30_10615 araC; arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D NYR30_10195 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D NYR30_12180 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D NYR30_12195 melR; transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D NYR30_02145 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NYR30_11960 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NYR30_10650 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D NYR30_04090 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D NYR30_02435 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NYR30_04930 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D NYR30_00525 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D NYR30_13155 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D NYR30_12075 DeoR/GlpR family DNA-binding transcription regulator K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D NYR30_10975 DeoR/GlpR family DNA-binding transcription regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D NYR30_01055 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR30_09645 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR30_10035 DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR30_13610 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D NYR30_05295 purR; HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D NYR30_09255 gntR; gluconate operon transcriptional repressor GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D NYR30_12240 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D NYR30_09975 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D NYR30_09935 GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D NYR30_07830 exuR; transcriptional regulator ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D NYR30_08880 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NYR30_13330 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D NYR30_03405 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D NYR30_10900 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D NYR30_11420 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NYR30_02430 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D NYR30_01510 asnC; transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D NYR30_07725 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NYR30_06020 mprA; transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D NYR30_08550 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D NYR30_08700 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NYR30_12735 kdgR; DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D NYR30_10710 IclR family transcriptional regulator K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D NYR30_10890 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NYR30_05095 FNR family transcription factor K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D NYR30_09915 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D NYR30_08525 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D NYR30_04860 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D NYR30_10010 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NYR30_00850 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NYR30_08785 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D NYR30_00230 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D NYR30_13210 nadR; multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D NYR30_06215 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D NYR30_03800 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D NYR30_06315 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein
D NYR30_04240 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D NYR30_01410 metJ; met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D NYR30_09835 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NYR30_13555 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D NYR30_06570 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D NYR30_05275 ROK family protein K15545 mlc; transcriptional regulator of PTS gene
D NYR30_10595 MltR family transcriptional regulator K02562 mtlR; mannitol operon repressor
D NYR30_12585 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D NYR30_11370 sigma 54-interacting transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D NYR30_01250 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D NYR30_06925 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D NYR30_08385 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D NYR30_09800 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D NYR30_02260 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D NYR30_09325 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NYR30_03600 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D NYR30_07825 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:gss03021]
D NYR30_13060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NYR30_00725 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NYR30_00730 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NYR30_10510 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NYR30_10545 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NYR30_13400 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NYR30_12265 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D NYR30_12625 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D NYR30_06485 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NYR30_04685 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D NYR30_00700 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NYR30_11365 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D NYR30_11360 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D NYR30_13395 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D NYR30_13390 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D NYR30_13385 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D NYR30_09325 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NYR30_06525 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D NYR30_13380 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D NYR30_00630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:gss03019]
D NYR30_01470 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NYR30_04080 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D NYR30_11720 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NYR30_11265 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NYR30_02575 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NYR30_00625 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D NYR30_00045 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NYR30_00955 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NYR30_11625 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR30_00055 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NYR30_00630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NYR30_03055 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NYR30_08510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR30_01570 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR30_02500 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR30_09330 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D NYR30_01800 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NYR30_00820 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D NYR30_10870 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D NYR30_12310 rraB; ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D NYR30_11600 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D NYR30_03595 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:gss03011]
D NYR30_09700 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NYR30_09435 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NYR30_12950 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NYR30_13055 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NYR30_13020 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NYR30_01175 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NYR30_10785 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NYR30_13005 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NYR30_02995 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NYR30_12915 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NYR30_13050 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NYR30_10790 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NYR30_13045 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NYR30_13000 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NYR30_02840 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NYR30_11030 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NYR30_12965 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NYR30_01185 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NYR30_12940 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NYR30_13290 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NYR30_10535 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NYR30_00710 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NYR30_12935 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NYR30_12920 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NYR30_12925 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NYR30_12995 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NYR30_13010 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NYR30_01190 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NYR30_00715 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NYR30_00705 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NYR30_00720 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NYR30_03000 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NYR30_12985 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NYR30_13030 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NYR30_12955 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NYR30_13065 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NYR30_13015 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NYR30_11015 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NYR30_03520 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NYR30_11160 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NYR30_12945 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NYR30_12930 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NYR30_12990 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NYR30_11155 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NYR30_12770 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NYR30_12960 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NYR30_13025 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NYR30_02415 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NYR30_08705 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NYR30_11105 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NYR30_12775 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NYR30_01445 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NYR30_03515 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NYR30_08710 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NYR30_13040 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NYR30_05045 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D NYR30_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_02470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_08845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_10480 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_11705 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_12675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_02485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_08835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_10465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_11695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_12690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_00020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_00025 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_02490 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_08830 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_10460 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_11690 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_12695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:gss03009]
D NYR30_11720 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NYR30_02575 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NYR30_11715 era; GTPase Era K03595 era; GTPase
D NYR30_12785 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D NYR30_09325 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NYR30_06485 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NYR30_04685 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D NYR30_00700 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NYR30_08420 rsuA; 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D NYR30_01240 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NYR30_12370 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NYR30_06075 rsmC; 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D NYR30_11800 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NYR30_02265 rsmE; 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NYR30_12425 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NYR30_07820 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NYR30_04725 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NYR30_01120 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D NYR30_11270 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NYR30_08810 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D NYR30_00615 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D NYR30_03485 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D NYR30_05630 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D NYR30_02135 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D NYR30_03300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NYR30_13415 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D NYR30_02645 rlmC; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D NYR30_05470 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NYR30_12620 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NYR30_04925 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NYR30_01465 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D NYR30_02800 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NYR30_09000 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D NYR30_11530 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D NYR30_03610 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D NYR30_02745 RimK family alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D NYR30_11025 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D NYR30_03765 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D NYR30_06580 ycaO; 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D NYR30_00895 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D NYR30_05360 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D NYR30_10025 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D NYR30_01470 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NYR30_04080 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D NYR30_02255 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D NYR30_00045 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NYR30_00205 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D NYR30_02580 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NYR30_05990 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D NYR30_12320 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NYR30_10505 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NYR30_06475 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D NYR30_06490 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D NYR30_00620 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D NYR30_02295 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D NYR30_08815 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D NYR30_03310 ribosome-associated protein K09889 yjgA; ribosome-associated protein
D NYR30_01130 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A
D NYR30_01635 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D NYR30_11100 yceD; 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:gss03016]
D NYR30_09465 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D NYR30_12825 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR30_00910 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NYR30_13310 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NYR30_10350 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR30_06080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NYR30_03745 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NYR30_02180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR30_01315 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NYR30_06265 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR30_00815 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NYR30_05270 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NYR30_03630 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NYR30_05610 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NYR30_00760 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NYR30_08610 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NYR30_03280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NYR30_05465 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NYR30_05460 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NYR30_08930 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR30_00175 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NYR30_10990 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D NYR30_09590 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NYR30_11680 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D NYR30_10880 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D NYR30_05040 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D NYR30_06470 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D NYR30_09910 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NYR30_12320 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NYR30_02505 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NYR30_01425 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D NYR30_12420 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NYR30_03640 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D NYR30_13365 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NYR30_01440 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D NYR30_05700 rnpB; RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D NYR30_03165 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D NYR30_12660 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D NYR30_02110 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D NYR30_06505 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NYR30_04695 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D NYR30_01730 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NYR30_01750 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NYR30_10430 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D NYR30_11615 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NYR30_09060 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D NYR30_00855 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D NYR30_11380 dusC; tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D NYR30_07705 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D NYR30_06270 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D NYR30_05605 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D NYR30_01125 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D NYR30_11020 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D NYR30_11530 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D NYR30_09920 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D NYR30_12145 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D NYR30_00210 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D NYR30_05425 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D NYR30_05470 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NYR30_12620 rluA; bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NYR30_13605 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NYR30_05590 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D NYR30_13270 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D NYR30_10795 sulfurtransferase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D NYR30_10800 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D NYR30_10805 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D NYR30_07045 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D NYR30_09900 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D NYR30_00040 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D NYR30_07200 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D NYR30_01580 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D NYR30_02670 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NYR30_05440 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NYR30_11170 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D NYR30_01595 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D NYR30_05260 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D NYR30_03335 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D NYR30_02300 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D NYR30_04835 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D NYR30_10530 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D NYR30_02525 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D NYR30_05635 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D NYR30_11265 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NYR30_00055 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NYR30_03855 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NYR30_07600 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:gss03012]
D NYR30_09725 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D NYR30_06480 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NYR30_03510 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NYR30_10525 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D NYR30_09430 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D NYR30_10775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR30_13130 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR30_10780 fusA; elongation factor G K02355 fusA; elongation factor G
D NYR30_12050 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D NYR30_05920 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D NYR30_09420 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D NYR30_05910 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D NYR30_01640 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D NYR30_03970 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D NYR30_01145 efp; elongation factor P K02356 efp; elongation factor P
D NYR30_02630 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D NYR30_01140 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D NYR30_06440 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D NYR30_01310 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D NYR30_08935 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D NYR30_03010 ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:gss03110]
D NYR30_10935 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NYR30_01675 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D NYR30_05845 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D NYR30_10920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D NYR30_08510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR30_09890 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D NYR30_01570 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR30_08505 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NYR30_11390 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D NYR30_09895 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D NYR30_12640 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D NYR30_05950 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D NYR30_13375 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D NYR30_01565 co-chaperone GroES K04078 groES; chaperonin GroES
D NYR30_08805 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NYR30_12435 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NYR30_11295 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR30_12490 dmsD; Tat proofreading chaperone DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D NYR30_00755 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D NYR30_03845 ppiD; peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D NYR30_10815 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D NYR30_11090 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D NYR30_07985 slyD; peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D NYR30_12615 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D NYR30_01245 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D NYR30_10280 trxA; thioredoxin K03671 TXN; thioredoxin
D NYR30_06210 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D NYR30_02755 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1
D NYR30_09240 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D NYR30_05665 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NYR30_01950 DsbA family protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR30_09350 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR30_09985 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D NYR30_09360 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D NYR30_09525 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D NYR30_01850 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D NYR30_10100 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:gss04131]
D NYR30_02200 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NYR30_09970 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NYR30_11305 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR30_05240 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR30_10920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:gss03051]
D NYR30_10920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:gss03032]
D NYR30_06185 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NYR30_01225 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D NYR30_05455 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NYR30_09705 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NYR30_01450 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NYR30_02155 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR30_04260 AAA family ATPase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR30_07255 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR30_11475 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D NYR30_10540 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NYR30_07280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11965 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR30_01455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR30_08625 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR30_10360 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR30_08005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR30_06180 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08485 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08640 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR30_03615 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NYR30_09365 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NYR30_01545 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR30_07240 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NYR30_10385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR30_08680 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D NYR30_03360 hda; DnaA inactivator Hda K10763 hda; DnaA-homolog protein
D NYR30_06045 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NYR30_07870 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NYR30_02835 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NYR30_02830 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NYR30_05120 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NYR30_02785 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D NYR30_07320 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:gss03036]
D NYR30_11720 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NYR30_05185 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D NYR30_01225 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D NYR30_05455 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NYR30_09705 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NYR30_01450 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NYR30_04740 SIS domain-containing protein K12961 diaA; DnaA initiator-associating protein
D NYR30_00850 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NYR30_02500 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR30_07725 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NYR30_02405 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D NYR30_05575 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D NYR30_05580 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D NYR30_05585 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D NYR30_07760 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NYR30_12380 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D NYR30_11810 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NYR30_07810 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NYR30_07735 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D NYR30_07815 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D NYR30_02425 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN
D NYR30_07765 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D NYR30_07785 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_11815 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NYR30_07755 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NYR30_08945 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D NYR30_01485 cell division protein ZapA K09888 zapA; cell division protein ZapA
D NYR30_00740 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D NYR30_04910 cell division protein ZapC K18657 zapC; cell division protein ZapC
D NYR30_02515 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR30_03400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR30_10900 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D NYR30_08680 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D NYR30_03385 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NYR30_03380 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D NYR30_03375 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D NYR30_00605 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_02835 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NYR30_02830 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NYR30_12420 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NYR30_12425 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NYR30_09490 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D NYR30_13465 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D NYR30_06085 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NYR30_03955 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D NYR30_11635 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:gss03400]
D NYR30_03490 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D NYR30_03035 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR30_11675 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NYR30_01760 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NYR30_09665 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NYR30_10365 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NYR30_13425 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NYR30_10905 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NYR30_03130 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR30_01610 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NYR30_05000 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NYR30_11150 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NYR30_05785 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D NYR30_07065 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D NYR30_09355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR30_07240 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NYR30_01545 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR30_11840 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NYR30_08440 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D NYR30_09285 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D NYR30_12260 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR30_00725 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NYR30_00730 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NYR30_13060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NYR30_10510 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NYR30_05625 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NYR30_11405 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NYR30_02510 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D NYR30_03920 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D NYR30_03715 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D NYR30_10030 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NYR30_05255 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NYR30_11545 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR30_01455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR30_08625 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR30_10360 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR30_08005 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR30_06180 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08485 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR30_08640 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR30_03615 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NYR30_07280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11965 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_10385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR30_05375 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D NYR30_10735 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D NYR30_05370 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D NYR30_11400 recA; recombinase RecA K03553 recA; recombination protein RecA
D NYR30_03500 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NYR30_03505 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NYR30_06245 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NYR30_02420 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NYR30_01180 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D NYR30_02175 primosomal replication protein K04067 priC; primosomal replication protein N''
D NYR30_09440 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D NYR30_01460 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NYR30_10500 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NYR30_13410 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NYR30_08630 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D NYR30_05940 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D NYR30_04120 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D NYR30_13445 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D NYR30_06165 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1
D NYR30_06045 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NYR30_07870 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NYR30_05120 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NYR30_01225 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D NYR30_00850 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NYR30_05455 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NYR30_09705 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NYR30_00955 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NYR30_05185 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D NYR30_06450 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D NYR30_02025 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NYR30_11395 recX; recombination regulator RecX K03565 recX; regulatory protein
D NYR30_10770 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D NYR30_04840 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D NYR30_05170 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NYR30_05165 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:gss03029]
D NYR30_06480 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NYR30_03510 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NYR30_09430 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D NYR30_10775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR30_13130 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR30_10780 fusA; elongation factor G K02355 fusA; elongation factor G
D NYR30_11715 era; GTPase Era K03595 era; GTPase
D NYR30_08930 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR30_10350 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR30_06265 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR30_02180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR30_07280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_11965 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR30_09395 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D NYR30_08510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR30_05950 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D NYR30_01570 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR30_01565 co-chaperone GroES K04078 groES; chaperonin GroES
D NYR30_08505 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NYR30_09910 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NYR30_09895 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D NYR30_05665 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NYR30_06085 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NYR30_02865 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NYR30_01430 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR30_10920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:gss02000]
D NYR30_09305 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NYR30_10835 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D NYR30_11205 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D NYR30_06195 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NYR30_06200 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D NYR30_03730 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D NYR30_10180 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D NYR30_13535 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D NYR30_06375 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D NYR30_12560 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D NYR30_12225 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NYR30_12220 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NYR30_12215 TOBE-like domain-containing protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NYR30_06410 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NYR30_06420 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D NYR30_06415 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NYR30_06040 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D NYR30_00780 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR30_02075 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR30_03150 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR30_00790 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NYR30_02080 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NYR30_03145 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NYR30_00785 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_00795 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_02085 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_03140 fbpC; ferric ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NYR30_03935 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D NYR30_03940 thiP; thiamine/thiamine pyrophosphate ABC transporter permease K02063 thiP; thiamine transport system permease protein
D NYR30_03945 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D NYR30_04600 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NYR30_13070 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NYR30_04630 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D NYR30_04635 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D NYR30_04640 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D NYR30_12590 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D NYR30_12580 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D NYR30_12575 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D NYR30_01975 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D NYR30_01970 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D NYR30_01965 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D NYR30_13175 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NYR30_10635 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D NYR30_10645 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein
D NYR30_10640 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D NYR30_09630 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D NYR30_09635 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D NYR30_10050 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D NYR30_10060 gguB; sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D NYR30_10055 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D NYR30_01065 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D NYR30_10725 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D NYR30_01070 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D NYR30_10720 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D NYR30_01075 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NYR30_10715 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NYR30_08490 substrate-binding domain-containing protein K17213 K17213; inositol transport system substrate-binding protein
D NYR30_08500 ABC transporter permease K17214 K17214; inositol transport system permease protein
D NYR30_08495 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D NYR30_13090 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D NYR30_13095 ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D NYR30_11565 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NYR30_11570 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NYR30_11575 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NYR30_11560 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D NYR30_11555 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D NYR30_13180 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D NYR30_13185 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D NYR30_13190 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D NYR30_12270 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR30_12275 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D NYR30_12280 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D NYR30_12285 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NYR30_02240 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D NYR30_02250 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein
D NYR30_02245 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein
D NYR30_02235 artP; arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D NYR30_00870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_00875 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_00880 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D NYR30_00885 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D NYR30_02450 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D NYR30_02455 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D NYR30_02460 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D NYR30_11750 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D NYR30_11755 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D NYR30_11760 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D NYR30_03645 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03650 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NYR30_03655 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D NYR30_03660 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D NYR30_03665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D NYR30_03670 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D NYR30_01875 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D NYR30_09840 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D NYR30_09845 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D NYR30_09850 dppC; dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein
D NYR30_09855 dppD; dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D NYR30_09860 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D NYR30_07680 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D NYR30_07675 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein
D NYR30_07670 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D NYR30_07665 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D NYR30_07660 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D NYR30_02810 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NYR30_10995 Fe(3+) dicitrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D NYR30_11005 fecD; Fe(3+) dicitrate ABC transporter permease subunit FecD K23182 fecD; ferric citrate transport system permease protein
D NYR30_11000 fecC; iron-dicitrate ABC transporter permease FecC K23183 fecC; ferric citrate transport system permease protein
D NYR30_11010 fecE; Fe(3+) dicitrate ABC transporter ATP-binding protein FecE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D NYR30_05070 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D NYR30_05075 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D NYR30_05065 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D NYR30_05715 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D NYR30_05720 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D NYR30_05725 ATP-binding cassette domain-containing protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D NYR30_06390 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D NYR30_06400 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D NYR30_06405 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D NYR30_06395 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D NYR30_08565 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D NYR30_05010 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D NYR30_05015 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NYR30_07040 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D NYR30_07030 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D NYR30_07025 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D NYR30_07035 ATP-binding cassette domain-containing protein K11607 sitB; manganese/iron transport system ATP-binding protein
D NYR30_03995 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D NYR30_04000 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NYR30_06095 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D NYR30_06090 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D NYR30_11590 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NYR30_00495 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein
D NYR30_00490 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D NYR30_00485 ATP-binding cassette domain-containing protein K25182 ybhF; drug efflux transport system ATP-binding protein
D NYR30_00215 efflux RND transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG
D NYR30_05880 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein
D NYR30_05890 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D NYR30_05885 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NYR30_01835 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D NYR30_01830 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D NYR30_01825 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NYR30_01820 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NYR30_11815 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NYR30_11810 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NYR30_06425 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D NYR30_06430 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NYR30_03565 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D NYR30_03570 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D NYR30_03560 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NYR30_00060 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D NYR30_02685 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D NYR30_05285 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D NYR30_10950 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D NYR30_13490 sugar efflux transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D NYR30_03780 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D NYR30_00930 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D NYR30_04595 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D NYR30_13455 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D NYR30_03240 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D NYR30_00835 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D NYR30_02950 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D NYR30_03255 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D NYR30_08765 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D NYR30_03900 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NYR30_08425 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D NYR30_10240 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D NYR30_01520 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D NYR30_06030 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D NYR30_05930 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D NYR30_06320 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D NYR30_02955 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D NYR30_02595 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D NYR30_02590 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D NYR30_01655 fruB; fused PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D NYR30_02600 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_02730 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NYR30_11505 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D NYR30_13625 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D NYR30_01645 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NYR30_10585 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D NYR30_12095 gatA; PTS galactitol transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D NYR30_12090 gatB; PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D NYR30_12085 galactitol-specific PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D NYR30_02050 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D NYR30_02055 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D NYR30_02060 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D NYR30_11785 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D NYR30_11780 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D NYR30_11775 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D NYR30_11595 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D NYR30_09730 aquaporin K02440 glpF; glycerol uptake facilitator
D NYR30_06335 ammonium transporter K03320 amt; ammonium transporter, Amt family
D NYR30_05335 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR30_11365 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D NYR30_07050 Bax inhibitor-1 family protein K19416 yccA; modulator of FtsH protease
D NYR30_09595 focA; formate transporter FocA K06212 focA; formate transporter
D NYR30_12355 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D NYR30_08670 mscK; mechanosensitive channel MscK K05802 mscK; potassium-dependent mechanosensitive channel
D NYR30_07655 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D NYR30_00670 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D NYR30_06125 exbB; TonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D NYR30_00675 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NYR30_06120 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D NYR30_02905 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D NYR30_02910 tolR; colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR
D NYR30_11820 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D NYR30_00130 fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D NYR30_03020 mercuric transporter MerT family protein K08363 merT; mercuric ion transport protein
D NYR30_03025 heavy-metal-associated domain-containing protein K08364 merP; periplasmic mercuric ion binding protein
D NYR30_08750 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NYR30_10860 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NYR30_06055 ompA; porin OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D NYR30_03535 porin K06076 fadL; long-chain fatty acid transport protein
D NYR30_13525 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D NYR30_04510 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D NYR30_00660 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NYR30_04520 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NYR30_05745 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NYR30_06130 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NYR30_05085 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR30_13540 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR30_11200 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D NYR30_09395 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D NYR30_02805 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D NYR30_02410 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D NYR30_11320 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA
D NYR30_11325 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D NYR30_11585 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D NYR30_11580 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D NYR30_09570 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D NYR30_10355 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D NYR30_04065 corC; CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D NYR30_04575 CidA/LrgA family protein K06518 cidA; holin-like protein
D NYR30_12205 melB; melibiose:sodium transporter MelB K11104 melB; melibiose permease
D NYR30_12565 basic amino acid/polyamine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D NYR30_03050 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D NYR30_03395 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR30_00200 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D NYR30_05850 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D NYR30_11135 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D NYR30_02655 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NYR30_02695 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NYR30_02700 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NYR30_03160 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D NYR30_02095 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D NYR30_02005 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D NYR30_01660 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NYR30_09500 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NYR30_06190 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D NYR30_13325 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D NYR30_01235 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D NYR30_00900 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D NYR30_09830 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D NYR30_00500 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D NYR30_06500 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D NYR30_12650 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D NYR30_09980 nhaB; sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D NYR30_02550 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D NYR30_05190 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D NYR30_09690 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D NYR30_12360 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D NYR30_12365 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D NYR30_05545 codB; cytosine permease K10974 codB; cytosine permease
D NYR30_03355 NCS2 family protein K02824 uraA; uracil permease
D NYR30_01255 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D NYR30_05385 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D NYR30_05925 aromatic amino acid transporter K03834 tyrP; tyrosine-specific transport protein
D NYR30_01895 mtr; tryptophan permease K03835 mtr; tryptophan-specific transport protein
D NYR30_05210 serine/threonine transporter K03837 sdaC; serine transporter
D NYR30_05030 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D NYR30_01005 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_01380 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_04775 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_07845 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_09955 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10200 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10560 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10565 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_10685 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_12745 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D NYR30_01010 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_01375 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_07840 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_09950 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10205 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10555 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10570 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_10695 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_12750 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D NYR30_01015 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_01370 dctM; C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein
D NYR30_07835 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_09945 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_10210 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_10550 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_10690 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D NYR30_12755 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D NYR30_04770 TRAP transporter large permease subunit K21393 dctQM; TRAP-type transport system permease protein
D NYR30_00540 dcuC; anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D NYR30_13295 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NYR30_03930 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D NYR30_04715 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D NYR30_06560 AEC family transporter K24180 mleP; malate permease and related proteins
D NYR30_12150 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D NYR30_04670 LysE family transporter K05835 rhtC; threonine efflux protein
D NYR30_00920 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D NYR30_00915 AzlD family protein K26606 azlD; branched chain amino acid efflux pump
D NYR30_00985 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D NYR30_03370 AI-2E family transporter K03548 perM; putative permease
D NYR30_01115 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter
D NYR30_10520 MarC family protein K05595 marC; multiple antibiotic resistance protein
D NYR30_07785 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NYR30_03585 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D NYR30_10740 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D NYR30_10750 EfeM/EfeO family lipoprotein K07224 efeO; iron uptake system component EfeO
D NYR30_10745 efeB; iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D NYR30_03580 iron transporter K07230 p19; periplasmic iron binding protein
D NYR30_05345 nickel/cobalt transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D NYR30_12210 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D NYR30_05395 lysine exporter LysO family protein K28370 lysO; lysine exporter
D NYR30_00680 energy transducer TonB K03832 tonB; periplasmic protein TonB
D NYR30_06115 energy transducer TonB K03832 tonB; periplasmic protein TonB
D NYR30_02925 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D NYR30_02915 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D NYR30_02920 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D NYR30_09145 fdnG; formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D NYR30_12475 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D NYR30_12480 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D NYR30_12485 dimethyl sulfoxide reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D NYR30_12500 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D NYR30_12510 ttrB; tetrathionate reductase subunit TtrB K08358 ttrB; tetrathionate reductase subunit B
D NYR30_12505 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C
D NYR30_06025 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D NYR30_11210 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D NYR30_03400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR30_03735 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D NYR30_04745 dolP; division/outer membrane stress-associated lipid-binding lipoprotein K28369 dolP; outer membrane lipoprotein DolP
D NYR30_12630 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D NYR30_01405 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D NYR30_01395 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D NYR30_06350 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D NYR30_06355 MlaD family protein K06192 pqiB; intermembrane transport protein PqiB/LetB
D NYR30_01845 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:gss02044]
D NYR30_11205 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D NYR30_11210 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D NYR30_11200 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D NYR30_03295 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D NYR30_11355 prepilin-type N-terminal cleavage/methylation domain-containing protein K02679 ppdA; prepilin peptidase dependent protein A
D NYR30_11350 prepilin-type N-terminal cleavage/methylation domain-containing protein K02680 ppdB; prepilin peptidase dependent protein B
D NYR30_11340 DUF5374 domain-containing protein K02681 ppdC; prepilin peptidase dependent protein C
D NYR30_09080 prepilin-type N-terminal cleavage/methylation domain-containing protein K02682 ppdD; prepilin peptidase dependent protein D
D NYR30_09085 GspE/PulE family protein K02504 hofB; protein transport protein HofB
D NYR30_09090 type II secretion system F family protein K02505 hofC; protein transport protein HofC
D NYR30_10400 pilQ; type IV pilus secretin PilQ K02507 hofQ; protein transport protein HofQ
D NYR30_07895 YggT family protein K02221 yggT; YggT family protein
D NYR30_00845 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D NYR30_09320 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D NYR30_07250 ParA family protein K12055 K12055; chromosome partitioning related protein ParA
D NYR30_07645 TraI domain-containing protein K12070 traI; conjugal transfer pilus assembly protein TraI
D NYR30_07420 traD; type IV conjugative transfer system coupling protein TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D NYR30_09360 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D NYR30_13515 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D NYR30_13525 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D NYR30_10370 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR30_11295 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR30_07715 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NYR30_00695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR30_07720 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NYR30_05810 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR30_13035 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR30_08760 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NYR30_11805 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR30_07710 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR30_01430 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR30_03110 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D NYR30_03115 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D NYR30_03120 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:gss02042]
D NYR30_08750 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NYR30_10860 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:gss02022]
D NYR30_12295 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NYR30_12290 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NYR30_10130 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D NYR30_10125 cpxR; envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D NYR30_09990 ATP-binding protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D NYR30_08940 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D NYR30_03065 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NYR30_03070 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D NYR30_11985 narQ; nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D NYR30_04805 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D NYR30_03250 uhpB; signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D NYR30_03245 uhpA; transcriptional regulator UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D NYR30_00770 ATP-binding protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D NYR30_00765 sigma-54 dependent transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D NYR30_12515 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D NYR30_12520 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
C 02035 Bacterial motility proteins [BR:gss02035]
D NYR30_00870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_00875 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NYR30_03295 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D NYR30_13515 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D NYR30_13525 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:gss04812]
D NYR30_03385 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NYR30_07755 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NYR30_07760 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:gss04147]
D NYR30_10920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D NYR30_11625 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR30_09970 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NYR30_13500 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NYR30_05240 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR30_10120 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D NYR30_01570 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR30_08510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR30_02165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR30_10730 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR30_06950 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NYR30_10775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR30_13130 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR30_09590 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NYR30_04985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NYR30_03675 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_06510 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D NYR30_03895 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NYR30_08645 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NYR30_12125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NYR30_02150 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NYR30_05750 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR30_09655 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D NYR30_05510 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NYR30_09735 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NYR30_09245 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR30_03125 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NYR30_12905 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR30_02220 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NYR30_03835 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR30_13360 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR30_01025 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_02270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR30_11305 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:gss02048]
D NYR30_06165 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1
D NYR30_06160 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D NYR30_06135 csy1; type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D NYR30_06140 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D NYR30_06145 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D NYR30_06150 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D NYR30_12880 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D NYR30_12855 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D NYR30_12865 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D NYR30_12875 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D NYR30_10385 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR30_09610 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D NYR30_09620 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D NYR30_07120 mazF; endoribonuclease MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D NYR30_07125 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D NYR30_02120 type II toxin-antitoxin system PemK/MazF family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D NYR30_06515 type II toxin-antitoxin system PemK/MazF family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D NYR30_02125 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18842 chpS; antitoxin ChpS
D NYR30_06520 antitoxin K18842 chpS; antitoxin ChpS
D NYR30_05525 HipA N-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D NYR30_06220 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D NYR30_06215 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D NYR30_01555 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D NYR30_04550 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D NYR30_06770 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D NYR30_08225 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D NYR30_01550 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D NYR30_04545 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D NYR30_06765 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D NYR30_08220 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D NYR30_03855 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NYR30_07600 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NYR30_03860 antitoxin K18829 mvpT; antitoxin VapB
D NYR30_07605 antitoxin K18829 mvpT; antitoxin VapB
D NYR30_05600 zeta toxin family protein K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
D NYR30_07755 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NYR30_03385 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NYR30_02835 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NYR30_02830 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NYR30_12825 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR30_13405 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D NYR30_09910 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:gss04052]
D NYR30_09550 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:gss01504]
D NYR30_05930 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D NYR30_05190 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D NYR30_11435 tet(W); tetracycline resistance ribosomal protection protein Tet(W) K18220 tetM; ribosomal protection tetracycline resistance protein
D NYR30_03400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR30_03395 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR30_08550 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:gss00536]
D NYR30_04960 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin
D NYR30_07435 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin
D NYR30_07440 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin
D NYR30_07965 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin
D NYR30_12335 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:gss03100]
D NYR30_02480 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_10470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_12685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_12830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR30_03210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_08860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_10755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_10760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_11605 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR30_08530 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NYR30_11655 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NYR30_00030 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR30_03230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR30_03235 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR30_08045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NYR30_01700 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR30_01705 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR30_00010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR30_08840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR30_11700 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR30_02565 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_02570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_08025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_08035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_13120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR30_08855 tRNA-His K14226 tRNA-His; tRNA His
D NYR30_02475 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_04230 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_06845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_08285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_10475 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_12680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR30_01710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_04100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_05805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_08030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_08040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR30_10435 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_10440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_10445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_10450 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR30_01715 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR30_05645 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR30_06495 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR30_07245 tRNA-Ile K14230 tRNA-Met; tRNA Met
D NYR30_11660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NYR30_03205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR30_08850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR30_06455 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_07055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_09825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_10765 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR30_13110 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR30_13125 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR30_00035 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NYR30_04300 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NYR30_13115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NYR30_05340 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12805 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12810 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12815 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12820 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR30_12060 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D NYR30_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_02470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_08845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_10480 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_11705 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_12675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR30_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_02485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_08835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_10465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_11695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_12690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR30_00020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_00025 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_02490 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_08830 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_10460 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_11690 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_12695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR30_05700 rnpB; RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D NYR30_06965 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D NYR30_01480 ssrS; 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA
D NYR30_06370 ffs; signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D NYR30_12230 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D NYR30_12235 alcohol dehydrogenase catalytic domain-containing protein K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D NYR30_01530 dkgB; 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D NYR30_02000 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D NYR30_08600 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D NYR30_05475 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D NYR30_03425 NADPH-dependent F420 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D NYR30_01105 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NYR30_13135 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D NYR30_03155 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D NYR30_01615 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D NYR30_03760 msrAB; bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D NYR30_02285 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D NYR30_05685 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D NYR30_09180 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NYR30_11425 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D NYR30_06955 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D NYR30_12910 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D NYR30_13460 FAD-binding oxidoreductase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D NYR30_05105 ftnA; non-heme ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D NYR30_05110 ftnA; non-heme ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D NYR30_03005 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D NYR30_02610 nrdG; anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D NYR30_03910 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D NYR30_12400 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D NYR30_08775 tehB; SAM-dependent methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D NYR30_04060 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D NYR30_05655 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D NYR30_01810 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D NYR30_12250 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D NYR30_13590 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D NYR30_08595 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D NYR30_02010 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D NYR30_09340 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D NYR30_02985 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D NYR30_02990 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D NYR30_02900 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NYR30_11935 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NYR30_04915 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D NYR30_05235 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D NYR30_02625 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NYR30_08000 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NYR30_08685 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D NYR30_04310 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D NYR30_12040 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NYR30_01345 yqfB; N(4)-acetylcytidine aminohydrolase K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D NYR30_11415 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D NYR30_09445 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D NYR30_08590 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D NYR30_04565 cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D NYR30_00190 N-acetylneuraminate epimerase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D NYR30_10960 fucU; L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D NYR30_08585 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D NYR30_03190 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D NYR30_01340 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D NYR30_01775 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D NYR30_01780 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D NYR30_01785 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D NYR30_13560 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D NYR30_13565 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D NYR30_13570 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D NYR30_13575 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D NYR30_13580 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D NYR30_13585 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D NYR30_08740 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D NYR30_08735 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D NYR30_08730 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D NYR30_09150 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D NYR30_09540 yfaE; class I ribonucleotide reductase maintenance protein YfaE K11107 yfaE; ferredoxin
D NYR30_01770 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D NYR30_01765 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D NYR30_01790 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D NYR30_12415 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D NYR30_09905 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D NYR30_04555 cytochrome b562 K15536 cybC; soluble cytochrome b562
D NYR30_12020 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD
D NYR30_12025 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D NYR30_10095 heme lyase CcmF/NrfE family subunit K04016 nrfE; cytochrome c-type biogenesis protein NrfE
D NYR30_10105 nrfF; heme lyase NrfEFG subunit NrfF K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D NYR30_08695 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
D NYR30_11995 cytochrome c3 family protein K02569 napC; NapC/NirT family cytochrome c
D NYR30_12010 napG; ferredoxin-type protein NapG K02573 napG; ferredoxin-type protein NapG
D NYR30_12005 napH; quinol dehydrogenase ferredoxin subunit NapH K02574 napH; ferredoxin-type protein NapH
D NYR30_10080 nrfB; cytochrome c nitrite reductase pentaheme subunit K04013 nrfB; cytochrome c-type protein NrfB
D NYR30_10085 nrfC; cytochrome c nitrite reductase Fe-S protein K04014 nrfC; protein NrfC
D NYR30_10090 nrfD; cytochrome c nitrite reductase subunit NrfD K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D NYR30_08955 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein
D NYR30_02930 VOC family protein K08234 yaeR; glyoxylase I family protein
D NYR30_02345 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D NYR30_08515 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K26607 cyuA; putative L-cysteine desulfidase
C 99986 Glycan metabolism
D NYR30_09710 lipopolysaccharide assembly protein LapA domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
D NYR30_09715 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D NYR30_03960 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D NYR30_04830 heme biosynthesis protein HemY K02498 hemY; HemY protein
D NYR30_03105 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D NYR30_03100 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D NYR30_13215 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D NYR30_01865 mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D NYR30_09035 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D NYR30_08545 multicopper oxidase domain-containing protein K04753 sufI; suppressor of ftsI
C 99999 Others
D NYR30_01620 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D NYR30_03720 cspD; cold shock domain-containing protein CspD K03704 cspA; cold shock protein
D NYR30_06330 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D NYR30_11060 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D NYR30_01685 tig; trigger factor K03545 tig; trigger factor
D NYR30_02280 ferric reductase-like transmembrane domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D NYR30_09130 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D NYR30_10310 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D NYR30_00545 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D NYR30_11735 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D NYR30_10915 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D NYR30_07920 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D NYR30_05390 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D NYR30_04735 YraN family protein K07460 yraN; putative endonuclease
D NYR30_12045 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D NYR30_07745 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D NYR30_12315 topoisomerase DNA-binding C4 zinc finger domain-containing protein K07479 yrdD; putative DNA topoisomerase
D NYR30_09740 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase
D NYR30_00085 transposase K07483 K07483; transposase
D NYR30_01320 transposase K07483 K07483; transposase
D NYR30_01585 transposase K07483 K07483; transposase
D NYR30_03265 transposase K07483 K07483; transposase
D NYR30_04615 transposase K07483 K07483; transposase
D NYR30_06990 transposase K07483 K07483; transposase
D NYR30_09815 transposase K07483 K07483; transposase
D NYR30_12850 transposase K07483 K07483; transposase
D NYR30_00745 IS1595 family transposase K07488 K07488; transposase
D NYR30_03700 IS1595 family transposase K07488 K07488; transposase
D NYR30_03885 IS1595 family transposase K07488 K07488; transposase
D NYR30_04605 IS1595 family transposase K07488 K07488; transposase
D NYR30_04710 IS1595 family transposase K07488 K07488; transposase
D NYR30_04900 IS1595 family transposase K07488 K07488; transposase
D NYR30_05265 IS1595 family transposase K07488 K07488; transposase
D NYR30_05330 IS1595 family transposase K07488 K07488; transposase
D NYR30_05800 IS1595 family transposase K07488 K07488; transposase
D NYR30_06970 IS1595 family transposase K07488 K07488; transposase
D NYR30_08450 IS1595 family transposase K07488 K07488; transposase
D NYR30_08465 IS1595 family transposase K07488 K07488; transposase
D NYR30_08745 IS1595 family transposase K07488 K07488; transposase
D NYR30_09160 IS1595 family transposase K07488 K07488; transposase
D NYR30_09790 IS1595 family transposase K07488 K07488; transposase
D NYR30_10275 IS1595 family transposase K07488 K07488; transposase
D NYR30_01265 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D NYR30_08975 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D NYR30_09310 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D NYR30_11070 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D NYR30_11280 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D NYR30_01260 transposase K07496 K07496; putative transposase
D NYR30_08980 transposase K07496 K07496; putative transposase
D NYR30_09315 transposase K07496 K07496; putative transposase
D NYR30_11065 transposase K07496 K07496; putative transposase
D NYR30_11285 transposase K07496 K07496; putative transposase
D NYR30_00090 IS3 family transposase K07497 K07497; putative transposase
D NYR30_00235 Mu transposase C-terminal domain-containing protein K07497 K07497; putative transposase
D NYR30_01590 IS3 family transposase K07497 K07497; putative transposase
D NYR30_03270 IS3 family transposase K07497 K07497; putative transposase
D NYR30_03810 IS3 family transposase K07497 K07497; putative transposase
D NYR30_04540 IS3 family transposase K07497 K07497; putative transposase
D NYR30_04620 IS3 family transposase K07497 K07497; putative transposase
D NYR30_06985 IS3 family transposase K07497 K07497; putative transposase
D NYR30_12845 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D NYR30_08635 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D NYR30_01305 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein
D NYR30_10065 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D NYR30_10600 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D NYR30_09455 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D NYR30_08475 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D NYR30_01755 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D NYR30_13470 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D NYR30_13630 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D NYR30_01420 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D NYR30_10135 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D NYR30_03680 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D NYR30_03320 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D NYR30_01900 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D NYR30_10175 putative transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D NYR30_09515 septation protein A K06190 ispZ; intracellular septation protein
D NYR30_10855 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D NYR30_11485 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D NYR30_11310 envC; murein hydrolase activator EnvC K22719 envC; murein hydrolase activator
C 99993 Cell motility
D NYR30_10455 TfoX/Sxy family DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D NYR30_13520 fimbria/pilus periplasmic chaperone K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D NYR30_06345 proQ; RNA chaperone ProQ K03607 proQ; ProP effector
D NYR30_10825 uspA; universal stress protein UspA K06149 uspA; universal stress protein A
D NYR30_05090 uspE; universal stress protein UspE K14055 uspE; universal stress protein E
D NYR30_09250 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D NYR30_01935 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D NYR30_02290 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D NYR30_08480 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
D NYR30_09460 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D NYR30_07220 YtjB family periplasmic protein K07186 smp; membrane protein
D NYR30_07230 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D NYR30_07740 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D NYR30_05965 lolB; lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB
D NYR30_01295 MlaA family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D NYR30_07180 Wzz/FepE/Etk N-terminal domain-containing protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D NYR30_02190 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D NYR30_09390 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D NYR30_12410 nlpD; murein hydrolase activator NlpD K06194 nlpD; lipoprotein NlpD
D NYR30_00050 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D NYR30_01135 Opacity-associated protein A LysM-like domain-containing protein K07268 oapA; opacity associated protein
D NYR30_04790 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D NYR30_13550 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein
D NYR30_03690 NfeD family protein K07340 ybbJ; inner membrane protein
D NYR30_05400 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D NYR30_12705 glycine zipper 2TM domain-containing protein K04062 osmB; osmotically inducible lipoprotein OsmB
D NYR30_01840 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D NYR30_01855 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NYR30_01860 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NYR30_10110 nitrite reductase K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NYR30_03290 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D NYR30_13200 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D NYR30_00945 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D NYR30_05735 hutX; heme utilization cystosolic carrier protein HutX K07227 chuX; heme iron utilization protein
D NYR30_05380 DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D NYR30_06540 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D NYR30_04585 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D NYR30_03030 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D NYR30_05005 group III truncated hemoglobin K06886 glbN; hemoglobin
D NYR30_05220 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D NYR30_10985 virulence factor BrkB family protein K07058 K07058; membrane protein
D NYR30_04560 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D NYR30_11645 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D NYR30_03775 glucarate dehydratase family protein K13918 gudX; glucarate dehydratase-related protein
D NYR30_05680 LemA family protein K03744 lemA; LemA protein
D NYR30_10820 SlyX family protein K03745 slyX; SlyX protein
D NYR30_10930 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D NYR30_01795 YdcF family protein K03748 sanA; SanA protein
D NYR30_11385 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D NYR30_07695 YcjF family protein K08990 ycjF; putative membrane protein
D NYR30_07685 DUF1440 domain-containing protein K08996 yagU; putative membrane protein
D NYR30_01195 YchJ family protein K09858 K09858; SEC-C motif domain protein
D NYR30_10340 psiE; phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE
C 99997 Function unknown
D NYR30_05670 TPM domain-containing protein K06872 K06872; uncharacterized protein
D NYR30_05755 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D NYR30_08570 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D NYR30_07690 YcjX family protein K06918 K06918; uncharacterized protein
D NYR30_05485 L-cystine transporter K06956 K06956; uncharacterized protein
D NYR30_09125 N-acetyltransferase K06975 K06975; uncharacterized protein
D NYR30_05860 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D NYR30_02395 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D NYR30_06575 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D NYR30_01050 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D NYR30_05420 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D NYR30_01805 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D NYR30_08655 TSUP family transporter K07090 K07090; uncharacterized protein
D NYR30_03195 PhoX family phosphatase K07093 K07093; uncharacterized protein
D NYR30_02385 metallophosphoesterase K07098 K07098; uncharacterized protein
D NYR30_02760 YtfJ family protein K07109 K07109; uncharacterized protein
D NYR30_11080 yedE; YedE family putative selenium transporter K07112 K07112; uncharacterized protein
D NYR30_07085 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D NYR30_04730 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D NYR30_02585 SEL1-like repeat protein K07126 K07126; uncharacterized protein
D NYR30_13225 sel1 repeat family protein K07126 K07126; uncharacterized protein
D NYR30_13255 sel1 repeat family protein K07126 K07126; uncharacterized protein
D NYR30_11980 ATP-binding protein K07133 K07133; uncharacterized protein
D NYR30_06325 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D NYR30_01435 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D NYR30_07900 yggU; DUF167 family protein YggU K09131 K09131; uncharacterized protein
D NYR30_01930 PFL family protein K09157 K09157; uncharacterized protein
D NYR30_00590 ybeD; DUF493 family protein YbeD K09158 K09158; uncharacterized protein
D NYR30_04870 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D NYR30_01300 YfbU family protein K09161 K09161; uncharacterized protein
D NYR30_09505 YciI family protein K09780 K09780; uncharacterized protein
D NYR30_01665 YbaN family protein K09790 K09790; uncharacterized protein
D NYR30_09295 Trm112 family protein K09791 K09791; uncharacterized protein
D NYR30_01365 YdcH family protein K09794 K09794; uncharacterized protein
D NYR30_11315 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D NYR30_10020 RnfH family protein K09801 K09801; uncharacterized protein
D NYR30_02980 DUF496 family protein K09802 K09802; uncharacterized protein
D NYR30_05955 BrnT family toxin K09803 K09803; uncharacterized protein
D NYR30_02680 DUF535 family protein K09824 virK; uncharacterized protein
D NYR30_13595 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D NYR30_03040 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D NYR30_09120 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D NYR30_01220 DUF416 family protein K09891 K09891; uncharacterized protein
D NYR30_07880 yihI; Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein
D NYR30_01490 UPF0149 family protein K09895 K09895; uncharacterized protein
D NYR30_01945 YihD family protein K09896 K09896; uncharacterized protein
D NYR30_01955 DUF413 domain-containing protein K09897 K09897; uncharacterized protein
D NYR30_10895 YheU family protein K09898 K09898; uncharacterized protein
D NYR30_05145 DUF412 family protein K09899 K09899; uncharacterized protein
D NYR30_04855 HI1450 family dsDNA-mimic protein K09901 K09901; uncharacterized protein
D NYR30_07130 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D NYR30_02400 DUF1414 domain-containing protein K09904 K09904; uncharacterized protein
D NYR30_02185 VOC family protein K09907 K09907; uncharacterized protein
D NYR30_02215 DUF1043 family protein K09908 K09908; uncharacterized protein
D NYR30_07015 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein
D NYR30_05215 YacL family protein K09910 K09910; uncharacterized protein
D NYR30_04665 matP; macrodomain Ter protein MatP K09911 K09911; uncharacterized protein
D NYR30_04655 YoaH family protein K09917 K09917; uncharacterized protein
D NYR30_09485 DUF484 family protein K09921 K09921; uncharacterized protein
D NYR30_02090 DMT family protein K09922 K09922; uncharacterized protein
D NYR30_11685 YggL family protein K09923 K09923; uncharacterized protein
D NYR30_04335 DUF1073 domain-containing protein K09961 K09961; uncharacterized protein
D NYR30_09450 TIGR00153 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 13, 2025