+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Komagataeibacter xylinus

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ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C H845_1651 type I restriction-modification system specificity determinant protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C H845_1648 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases D H845_3472 putative type II restriction enzyme K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] C DNA methyltransferases D H845_1865 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D H845_2195 DNA methylase N-4/N-6 domain protein K13581 ccrM; modification methylase [EC:2.1.1.72] D H845_2194 site-specific DNA-methyltransferase (adenine-specific) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D H845_2451 putative modification methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D H845_586 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D H845_143 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D H845_3232 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C H845_990 Type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] C H845_2762 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C H845_991 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C H845_230 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D H845_3322 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D H845_3645 transcriptional regulator K07172 mazE; antitoxin MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D H845_3689 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D H845_3690 binoteal antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB C YafQ-dinJ D H845_3239 Addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D H845_3238 Addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D H845_3724 Addiction module toxin, Txe/YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D H845_3725 Prevent-host-death protein K19159 yefM; antitoxin YefM C HipA-HipB D H845_3621 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D H845_3693 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D H845_3709 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C PspC-PspB C CcdB-CcdA D H845_2431 hypothetical protein K19163 ccdB; toxin CcdB D H845_3455 CcdB-like toxin protein K19163 ccdB; toxin CcdB D H845_2430 hypothetical protein K19164 ccdA; antitoxin CcdA D H845_3456 hypothetical protein K19164 ccdA; antitoxin CcdA D H845_988 hypothetical protein K19164 ccdA; antitoxin CcdA C ParE-ParD D H845_733 putative addiction module antidote protein, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D H845_3261 death-on-curing family protein K07341 doc; death on curing protein D H845_3279 death-on-curing family protein K07341 doc; death on curing protein D H845_3734 death-on-curing family protein K07341 doc; death on curing protein C HigB-HigA D H845_136 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB D H845_3436 Transcriptional regulator NtrR/PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D H845_3458 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D H845_3437 Nucleic acid-binding protein K18829 mvpT; antitoxin VapB D H845_3459 transposase K18829 mvpT; antitoxin VapB D H845_3318 pilus retraction motor protein PilT K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-] D H845_3514 hypothetical protein K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-] D H845_754 hypothetical protein K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-] D H845_3319 prevent-host-death protein Phd/YefM K28280 vapB22; antitoxin VapB22 D H845_753 prevent-host-death family protein K28280 vapB22; antitoxin VapB22 C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D H845_3297 plasmid stabilization protein K07062 fitB; toxin FitB [EC:3.1.-.-] D H845_3298 plasmid stabilization protein K21495 fitA; antitoxin FitA D H845_3327 hypothetical protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C SpoIISA-SpoIISB C Tse6-Tsi6 C Type II TA system related factors D H845_1985 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D H845_366 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D H845_1725 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D H845_2498 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D H845_2484 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D H845_480 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D H845_1665 hypothetical protein K09159 cptB; antitoxin CptB C AbiEii-AbiEi B Type V TA system C GhoT-GhoS C Other GhoT/OrtT toxin family protein B Type VI TA system C SocB-SocA B Type VII TA system C Hha-TomB C TglT-TakA C HepT-MntA B Type VIII TA system C SdsR-RyeA # ADNA phosphothiolation system B Sulfur modification proteins C H845_339 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C H845_340 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2025