+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Halomicrobium mukohataei JP60
%
!
ACRISPR-Cas system
B Universal Cas proteins
C E5139_01465 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
C E5139_01470 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D E5139_01455 CRISPR-associated endonuclease Cas3'' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D E5139_01460 Dna2/Cas4 domain-containing protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_07615 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_01435 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
D E5139_01445 cas7b; type I-B CRISPR-associated protein Cas7/Csh2 K19115 csh2; CRISPR-associated protein Csh2
D E5139_01460 Dna2/Cas4 domain-containing protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_07615 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_01450 cas5b; type I-B CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
C Subtype I-C factors
D E5139_01460 Dna2/Cas4 domain-containing protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_07615 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D E5139_01460 Dna2/Cas4 domain-containing protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_07615 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_01435 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D E5139_01460 Dna2/Cas4 domain-containing protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D E5139_07615 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D E5139_05585 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D E5139_05510 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D E5139_02425 site-specific DNA-methyltransferase K24451 zim; modification methylase
B Type III R-M system
B Type IV R-M system
C E5139_02345 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
C E5139_16360 restriction endonuclease K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D E5139_05085 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D E5139_00880 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D E5139_11005 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D E5139_08950 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
D E5139_16365 Fic family protein K07341 doc; death on curing protein
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
D E5139_03610 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D E5139_00050 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D E5139_04630 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D E5139_01955 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D E5139_04145 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D E5139_00330 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D E5139_09735 NOB1 family endonuclease K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023