+F Repair protein KO
#
DNA Repair and Recombination Proteins - Helianthus annuus (common sunflower)
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 110939578 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 110941907 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 110867802 deoxyribodipyrimidine photo-lyase-like isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D 110867803 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 110897395 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 110897538 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 110867914 DNA-3-methyladenine glycosylase isoform X2 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 110916199 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 110893654 methyl-CpG-binding domain protein 4-like protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 110941201 N-glycosylase/DNA lyase OGG1 isoform X1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 110864961 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 110879781 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 110878477 DNA-(apurinic or apyrimidinic site) endonuclease 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 110895784 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 110897600 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 110912907 uncharacterized protein LOC110912907 K03504 POLD3; DNA polymerase delta subunit 3
F 110922378 uncharacterized protein LOC110922378 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 110940900 DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 110939648 DNA polymerase epsilon subunit B isoform X1 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 110908742 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 110868492 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110872711 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110940092 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110937242 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 110890950 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 110875688 DNA ligase 1 isoform X2 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 110915903 DNA-repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 110915410 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 110896008 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 110894373 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 110897559 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 110918775 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 110884018 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 110898098 protein ADP-ribosyltransferase PARP3 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 110909269 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 110911440 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 110911441 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 110915520 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 110880014 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 110925869 ubiquitin receptor RAD23d K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 110880261 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110893699 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110897767 RING-box protein 1a isoform X4 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110916508 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110911733 cullin-4 K10609 CUL4; cullin 4
F 110937032 cullin-4 K10609 CUL4; cullin 4
F 110936969 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 110911784 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 110868614 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 110877018 uncharacterized protein LOC110877018 K15082 RAD7; DNA repair protein RAD7
F 110928880 F-box/LRR-repeat protein 2 K15082 RAD7; DNA repair protein RAD7
F 110908430 DNA repair protein RAD16 isoform X1 K15083 RAD16; DNA repair protein RAD16
F 110929694 ATP-dependent helicase rhp16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 110936463 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 110911844 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 110937867 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 110915327 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 110929230 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 110864274 DNA-directed RNA polymerases IV and V subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 110910906 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 110889320 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110878755 DNA-directed RNA polymerases IV and V subunit 5B K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110925741 DNA-directed RNA polymerase V subunit 5C K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110940340 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110936148 DNA-directed RNA polymerases II and IV subunit 5A isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110915688 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 110936573 DNA-directed RNA polymerases II and V subunit 6B K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 110877826 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 110878466 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 110884502 DNA-directed RNA polymerases II and V subunit 8A K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 110898729 DNA-directed RNA polymerases II and V subunit 8A K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 110884569 DNA-directed RNA polymerases II and V subunit 8A K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 118492262 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 110940968 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 110909358 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 110936520 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 110872777 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 110878545 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 110910506 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 110880261 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110893699 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110897767 RING-box protein 1a isoform X4 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110916508 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110911733 cullin-4 K10609 CUL4; cullin 4
F 110937032 cullin-4 K10609 CUL4; cullin 4
F 110936969 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 110911784 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 110879351 WD repeat-containing protein ATCSA-1 isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 110883991 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 110937564 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 110917092 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 110921345 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 110864416 general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 110923316 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 110884127 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 110942151 general transcription and DNA repair factor IIH subunit TFB1-1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 110927083 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 110915660 general transcription and DNA repair factor IIH subunit TFB4 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 110925172 general transcription and DNA repair factor IIH subunit TFB4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 110926314 general transcription and DNA repair factor IIH subunit TFB2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 110920147 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 110909973 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 110884409 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 110893643 cyclin-H1-1 K06634 CCNH; cyclin H
E 110894568 cyclin-H1-1 K06634 CCNH; cyclin H
E 110928912 uncharacterized protein LOC110928912 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 110877488 uncharacterized protein LOC110877488 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 110886990 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110922708 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110919128 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110914951 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110887755 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 110894567 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 110876388 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 110938852 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 110943171 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 118479779 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 110910977 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 110872370 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 110890950 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 110875688 DNA ligase 1 isoform X2 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 110880199 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 110865828 cullin-3A K03869 CUL3; cullin 3
E 110868693 cullin-3B K03869 CUL3; cullin 3
E 110908822 cullin-3A K03869 CUL3; cullin 3
E 110911360 cullin-3A K03869 CUL3; cullin 3
E 110890547 elongin-C K03872 ELOC; elongin-C
E 110928915 polyubiquitin 9 K03873 ELOB; elongin-B
E 110894740 uncharacterized protein LOC110894740 isoform X1 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 110941615 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 110940551 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 110909917 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
E 110877154 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 110879316 DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E 110899394 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
E 110909095 DNA mismatch repair protein MLH3 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 110895784 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 110897600 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 110912907 uncharacterized protein LOC110912907 K03504 POLD3; DNA polymerase delta subunit 3
E 110922378 uncharacterized protein LOC110922378 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 110886990 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110922708 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110919128 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110914951 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110887755 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 110894567 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 110876388 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 110938852 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 110943171 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 118479779 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 110918467 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 110864373 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 110889516 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 110868430 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 110876449 uncharacterized protein LOC110876449 K10756 RFC3_5; replication factor C subunit 3/5
E 110921504 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 110889459 uncharacterized protein LOC110889459 K10756 RFC3_5; replication factor C subunit 3/5
E 110904380 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 110868492 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110872711 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110940092 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110930524 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 110937140 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 110890950 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 110875688 DNA ligase 1 isoform X2 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 110940577 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 110929740 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 110927276 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 110915662 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 110903917 BRCA1-associated RING domain protein 1 isoform X2 K10683 BARD1; BRCA1-associated RING domain protein 1
E 110903919 BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 110896139 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 110936854 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 110878026 uncharacterized protein LOC110878026 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 110897324 BRISC and BRCA1-A complex member 2 K12173 BRE; BRCA1-A complex subunit BRE
E 110885745 lys-63-specific deubiquitinase BRCC36 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 110866004 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 110945115 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 110864584 BRCT domain-containing protein At4g02110 isoform X2 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 110909930 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 110915694 DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 110929740 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 110927276 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 110915662 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA complex
E 110912213 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 110937993 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 110937993 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 110912756 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 110915634 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 110890534 DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 110935938 DNA repair protein XRCC2 homolog K10879 XRCC2; DNA-repair protein XRCC2
E 110940704 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 110879363 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 110865204 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 110864523 SNF2 domain-containing protein CLASSY 4 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110907736 SNF2 domain-containing protein CLASSY 3 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110907738 SNF2 domain-containing protein CLASSY 3 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110907740 SNF2 domain-containing protein CLASSY 3 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110872683 SNF2 domain-containing protein CLASSY 1 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110895277 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110929169 uncharacterized protein LOC110929169 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110931589 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110916496 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 110930145 ATP-dependent DNA helicase Q-like 2 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 110910225 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 110929406 ATP-dependent DNA helicase Q-like SIM K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 110928852 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110938049 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110893789 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
E 110896165 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 110928852 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110938049 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110919702 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110908632 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110873123 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110879938 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 110890944 recQ-mediated genome instability protein 2 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 110886990 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110922708 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110919128 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110914951 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110887755 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 110894567 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 110876388 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 110938852 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 110943171 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 118479779 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 110873611 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 110898990 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 110942102 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 110921061 uncharacterized protein LOC110921061 isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 110883715 serine/threonine-protein phosphatase 4 regulatory subunit 3 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 110940957 serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 110865222 uncharacterized protein LOC110865222 K19022 AP5B1; AP-5 complex subunit beta-1
E 110868115 AP-5 complex subunit mu isoform X1 K19023 AP5M1; AP-5 complex subunit mu-1
E 110898935 AP-5 complex subunit zeta-1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 110866034 structural maintenance of chromosomes protein 5 isoform X1 K22803 SMC5; structural maintenance of chromosomes protein 5
E 110882057 structural maintenance of chromosomes protein 6B K22804 SMC6; structural maintenance of chromosomes protein 6
E 110876649 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 110885704 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 110897570 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 110906040 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 110878254 crossover junction endonuclease EME1B K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 110940891 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 110913289 protein DSS1 HOMOLOG ON CHROMOSOME V K10881 SHFM1; 26 proteasome complex subunit DSS1
E 110916062 protein DELETION OF SUV3 SUPPRESSOR 1(I) K10881 SHFM1; 26 proteasome complex subunit DSS1
E 110869977 structure-specific endonuclease subunit SLX1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110911706 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110931069 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 110911889 single-strand DNA endonuclease 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 110872401 uncharacterized protein LOC110872401 isoform X1 K19026 SPG11; spatacsin
E 110926071 uncharacterized protein LOC110926071 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 110915204 protein MRG1 K11339 MORF4L1; mortality factor 4-like protein 1
E 110894820 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 110868587 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 110915849 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 110908285 homologous recombination OB-fold protein K27803 HROB; homologous recombination OB-fold protein
E 110898311 probable DNA helicase MCM8 isoform X1 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E 110929023 probable DNA helicase MCM9 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E 110877336 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 110889999 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 110880315 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 110911519 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 110915901 single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 118489097 ATP-dependent DNA helicase 2 subunit KU70-like K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 110915909 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 110929740 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 110927276 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 110940531 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 110900219 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 110918775 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 110896008 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 110910792 tyrosyl-DNA phosphodiesterase 2 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 110939616 tyrosyl-DNA phosphodiesterase 2 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 110872941 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
E 110872940 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
E 110872943 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 110903821 E3 ubiquitin-protein ligase FANCL K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 110920717 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 110886752 protein MHF1 homolog K11511 APITD1; centromere protein S
E 110873724 protein MHF2 homolog K15360 STRA13; centromere protein X
E 110893786 probable ubiquitin-conjugating enzyme E2 37 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 110928852 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110938049 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110919702 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110908632 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110873123 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110879938 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 110890944 recQ-mediated genome instability protein 2 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 110886670 Fanconi anemia group D2 protein isoform X1 K10891 FANCD2; fanconi anemia group D2 protein
E 110930719 Fanconi anemia group I protein isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 110912213 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 110866004 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 110945115 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 110869107 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 110937993 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 110915634 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 110941687 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 110894676 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
E 110917651 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
E 110908113 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 110915007 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 110912630 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 110911742 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 110913776 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 110937454 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 118487460 serine/threonine-protein phosphatase 6 regulatory subunit 3-like K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 110908669 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 110928982 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 110940577 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 110908871 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 110918701 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 110921243 DNA repair protein REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 110910694 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 110878210 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 110921239 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 110927128 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 110912300 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 110911143 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 118486689 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 110926893 DNA repair protein RAD5A K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 110900301 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 110898849 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 110911406 ubiquitin-conjugating enzyme E2 variant 1B K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110912870 ubiquitin-conjugating enzyme E2 variant 1C isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110926331 ubiquitin-conjugating enzyme E2 variant 1A K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110879882 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110898172 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110939712 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110895204 ubiquitin-conjugating enzyme E2 35 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 110929882 ubiquitin-conjugating enzyme E2 35 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 110885878 ubiquitin-conjugating enzyme E2 35 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 110868492 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 110872711 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 110940092 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 110929418 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 110929419 DNA repair protein rad9 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 110916588 uncharacterized protein LOC110916588 K10903 HUS1; HUS1 checkpoint protein
D 110921680 uncharacterized protein LOC110921680 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
D 110920677 uncharacterized protein LOC110920677 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 110911971 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 110864373 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 110889516 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 110868430 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 110876449 uncharacterized protein LOC110876449 K10756 RFC3_5; replication factor C subunit 3/5
D 110921504 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 110889459 uncharacterized protein LOC110889459 K10756 RFC3_5; replication factor C subunit 3/5
D 110904380 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 110921680 uncharacterized protein LOC110921680 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
D 110920677 uncharacterized protein LOC110920677 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 110942023 protein timeless homolog isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 110871738 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 110941687 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 110929817 uncharacterized protein LOC110929817 isoform X1 K20403 TTI1; TELO2-interacting protein 1
D 110877699 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 110868397 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
D 110904362 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 110940612 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 110912584 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 110864887 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 110889255 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 110909112 14-3-3 protein 9 isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 110889419 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 110877903 14-3-3 protein 10 K06630 YWHAE; 14-3-3 protein epsilon
D 110919690 14-3-3 protein 2 K06630 YWHAE; 14-3-3 protein epsilon
D 110912915 14-3-3 protein 9 K06630 YWHAE; 14-3-3 protein epsilon
D 110926457 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 110929881 14-3-3 protein 9 isoform X3 K06630 YWHAE; 14-3-3 protein epsilon
D 110894381 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 110908791 14-3-3-like protein GF14 psi K06630 YWHAE; 14-3-3 protein epsilon
D 110895689 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 110897459 14-3-3-like protein C isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 110908968 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 110942373 14-3-3 protein 2 K06630 YWHAE; 14-3-3 protein epsilon
D 110909310 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 110920652 14-3-3 protein 10 K06630 YWHAE; 14-3-3 protein epsilon
D 110941292 14-3-3 protein 2 K06630 YWHAE; 14-3-3 protein epsilon
D 110871910 14-3-3-like protein GF14 iota isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 110864252 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 110899211 uncharacterized protein LOC110899211 isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 110864802 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110866678 serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110897551 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110897581 serine/threonine-protein kinase Nek6 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110910913 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110903675 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110937120 serine/threonine-protein kinase Nek1 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110898228 protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D 110924976 protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D 110878943 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 110891030 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 110889132 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 110898097 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 110864832 replication stress response regulator SDE2 K25059 SDE2; replication stress response regulator SDE2
D 110918574 protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 110908530 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 110929290 myb-binding protein 1A-like protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 110912818 DNA-directed primase/polymerase protein isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 110865638 protein artemis K15340 DCLRE1A; DNA cross-link repair 1A protein
D 110894058 uncharacterized protein LOC110894058 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 110923564 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 110908393 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 110902029 endonuclease V K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 110899851 endonuclease V isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 110907922 DNA annealing helicase and endonuclease ZRANB3 isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 110890627 endonuclease 4 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 110916665 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 110920921 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 110884234 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 110890703 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 110877988 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 110872956 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 110930841 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 110921148 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 110872124 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110915032 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110915033 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110872824 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 110941465 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 110878239 ribonucleoside-diphosphate reductase large subunit isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 110912757 ribonucleoside-diphosphate reductase large subunit isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 110904092 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 110894096 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 110911212 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 110867802 deoxyribodipyrimidine photo-lyase-like isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D 110867803 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 110897395 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 110897538 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 110878887 probable DNA-3-methyladenine glycosylase 2 isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 110878888 DNA-3-methyladenine glycosylase 1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 110915322 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 110867914 DNA-3-methyladenine glycosylase isoform X2 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 110916199 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 110868183 DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110873780 uncharacterized protein LOC110873780 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110916901 DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110895514 uncharacterized protein LOC110895514 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110928825 probable GMP synthase [glutamine-hydrolyzing] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110914997 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110941607 probable GMP synthase [glutamine-hydrolyzing] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110910254 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 110910281 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 110910293 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 110864961 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 110879781 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 110885416 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 110942053 DNA polymerase I B, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 110942053 DNA polymerase I B, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 4055679 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 4055651 rpoC1; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 4055574 rpoC2; RNA polymerase beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 4055691 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 110918663 endonuclease MutS2 isoform X1 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 110916516 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 110865477 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 110890130 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 110938072 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 110865477 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 110890130 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 110938072 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 110940411 DNA repair protein RadA isoform X1 K04485 radA; DNA repair protein RadA/Sms
E 110912019 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 110903739 DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 110866525 DNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 110870212 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 110865477 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 110890130 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 110938072 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 110916516 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 110872124 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110915032 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110915033 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110872824 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 110941465 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024