+D GENES KO #

  KEGG Orthology (KO) - Hyphomonadaceae bacterium UKL13-1

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:hbc00010] D AEM38_01485 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AEM38_07450 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AEM38_13005 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AEM38_07615 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AEM38_13020 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AEM38_13010 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AEM38_14895 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_01935 hypothetical protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_08020 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AEM38_08770 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D AEM38_06620 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AEM38_08010 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AEM38_08000 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AEM38_07995 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_13685 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_06525 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:hbc00020] D AEM38_05880 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AEM38_01695 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AEM38_09550 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AEM38_12830 sucA; 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AEM38_12825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12835 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AEM38_12900 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AEM38_13455 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AEM38_11950 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AEM38_13445 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AEM38_13450 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AEM38_04520 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AEM38_13310 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AEM38_06620 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AEM38_08010 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AEM38_08000 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AEM38_07995 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:hbc00030] D AEM38_01485 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AEM38_13200 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AEM38_13485 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AEM38_13175 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AEM38_05770 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AEM38_02825 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AEM38_00930 hypothetical protein K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D AEM38_09530 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AEM38_11290 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17] D AEM38_15675 hypothetical protein K00851 idnK; gluconokinase [EC:2.7.1.12] D AEM38_01595 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D AEM38_01210 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AEM38_13005 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AEM38_07450 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:hbc00040] D AEM38_01585 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D AEM38_01590 3-ketoacyl-ACP reductase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D AEM38_01565 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D AEM38_01560 dioxygenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D AEM38_02425 hypothetical protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D AEM38_13185 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_13795 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_13180 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AEM38_13200 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:hbc00051] D AEM38_01225 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AEM38_13170 hypothetical protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AEM38_13805 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AEM38_13815 hypothetical protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AEM38_07450 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AEM38_13005 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AEM38_07615 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AEM38_02825 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AEM38_00305 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:hbc00052] D AEM38_16095 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6] D AEM38_16090 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D AEM38_13035 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AEM38_13180 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AEM38_16100 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D AEM38_13550 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D AEM38_14440 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AEM38_14045 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AEM38_15080 hypothetical protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism [PATH:hbc00053] D AEM38_13185 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_13795 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_02425 hypothetical protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D AEM38_11290 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17] D AEM38_13535 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:hbc00500] D AEM38_14440 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AEM38_14045 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AEM38_01240 hypothetical protein K00692 sacB; levansucrase [EC:2.4.1.10] D AEM38_13180 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AEM38_11885 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_15775 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_03485 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_01340 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AEM38_08310 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D AEM38_10750 hypothetical protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D AEM38_15080 hypothetical protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AEM38_01485 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AEM38_01225 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hbc00520] D AEM38_09685 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AEM38_01225 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AEM38_13495 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AEM38_04900 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D AEM38_05765 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AEM38_15770 N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D AEM38_04915 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D AEM38_00395 hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D AEM38_00390 hypothetical protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D AEM38_03260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AEM38_04880 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AEM38_13100 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D AEM38_13115 hypothetical protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D AEM38_13070 hypothetical protein K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D AEM38_13090 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D AEM38_13800 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D AEM38_01570 xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AEM38_13180 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AEM38_13185 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_13795 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_16095 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6] D AEM38_16090 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D AEM38_13035 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AEM38_13535 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AEM38_00305 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D AEM38_01485 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AEM38_13170 hypothetical protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AEM38_13805 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AEM38_13815 hypothetical protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:hbc00620] D AEM38_06525 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AEM38_06620 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AEM38_08010 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AEM38_08000 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AEM38_07995 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_13685 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AEM38_01420 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AEM38_07810 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AEM38_07815 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AEM38_00135 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_08740 lldD; lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D AEM38_13505 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AEM38_04375 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AEM38_02065 glyoxalase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AEM38_14460 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AEM38_13310 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AEM38_04520 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AEM38_14750 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AEM38_08770 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_09110 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hbc00630] D AEM38_06525 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AEM38_13310 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AEM38_05880 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AEM38_01695 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14805 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D AEM38_00655 dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D AEM38_09265 crotonyl-CoA reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] D AEM38_05570 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AEM38_09250 protein meaA K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63] D AEM38_11365 acyl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12] D AEM38_13390 dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D AEM38_14745 aldolase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D AEM38_08415 acetyl-CoA carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D AEM38_06200 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D AEM38_04470 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_04475 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_03350 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D AEM38_05245 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AEM38_05760 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AEM38_14285 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_14290 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08335 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_07345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AEM38_06290 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D AEM38_06295 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D AEM38_06275 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_06280 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AEM38_01210 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AEM38_13165 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:hbc00640] D AEM38_06525 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_01420 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AEM38_07810 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AEM38_07815 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AEM38_00135 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AEM38_10695 hypothetical protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AEM38_08415 acetyl-CoA carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D AEM38_06200 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D AEM38_05570 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AEM38_04470 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_04475 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_12900 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AEM38_12835 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AEM38_12545 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00650 Butanoate metabolism [PATH:hbc00650] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_13585 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_00655 dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D AEM38_07470 poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D AEM38_08520 poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D AEM38_01835 esterase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D AEM38_14805 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D AEM38_13455 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AEM38_11950 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AEM38_13445 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AEM38_13450 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AEM38_13405 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AEM38_02135 4-hydroxybutyrate dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D AEM38_15810 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AEM38_08300 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D AEM38_08295 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D AEM38_14950 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D AEM38_06205 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04580 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AEM38_00730 oxidoreductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:hbc00660] D AEM38_06205 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04580 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AEM38_12900 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AEM38_12835 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AEM38_15990 dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D AEM38_15995 hypothetical protein K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25] D AEM38_14745 aldolase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D AEM38_13390 dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D AEM38_15180 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AEM38_14115 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AEM38_15175 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AEM38_14100 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AEM38_14090 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:hbc00562] D AEM38_03830 inositol phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AEM38_04920 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AEM38_02670 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D AEM38_15785 oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AEM38_12545 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AEM38_07615 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:hbc00190] D AEM38_05405 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D AEM38_05410 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D AEM38_05415 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D AEM38_05435 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D AEM38_05455 NADH-quinone oxidoreductase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D AEM38_05470 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D AEM38_05510 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D AEM38_05515 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D AEM38_05520 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D AEM38_05525 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D AEM38_05530 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D AEM38_05535 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D AEM38_05540 NADH-quinone oxidoreductase chain 13 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D AEM38_05545 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D AEM38_12185 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D AEM38_13455 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AEM38_11950 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AEM38_13445 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AEM38_13450 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AEM38_09405 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AEM38_09400 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AEM38_09395 hypothetical protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AEM38_11565 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AEM38_11570 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D AEM38_11575 hypothetical protein K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D AEM38_11560 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AEM38_08025 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AEM38_06475 peptidase S41 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AEM38_06480 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AEM38_06485 cytochrome C oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AEM38_06490 cytochrome Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AEM38_14335 hypothetical protein K08738 CYC; cytochrome c D AEM38_05390 hypothetical protein K08738 CYC; cytochrome c D AEM38_13625 hypothetical protein K08738 CYC; cytochrome c D AEM38_12345 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AEM38_12360 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AEM38_12350 hypothetical protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AEM38_12340 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AEM38_12370 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AEM38_06320 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AEM38_06305 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AEM38_06310 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AEM38_06315 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AEM38_01815 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D AEM38_06800 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AEM38_09440 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:hbc00680] D AEM38_07345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AEM38_01210 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AEM38_08020 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AEM38_14750 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AEM38_13310 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AEM38_14745 aldolase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D AEM38_13005 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AEM38_07450 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AEM38_14705 coenzyme F420 hydrogenase K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D AEM38_06525 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AEM38_14895 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_01935 hypothetical protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_11640 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AEM38_11645 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AEM38_01900 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AEM38_01920 phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:hbc00910] D AEM38_11085 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D AEM38_04460 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D AEM38_01790 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AEM38_14285 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_14290 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08335 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_16085 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AEM38_16080 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AEM38_01025 hypothetical protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D AEM38_06245 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D AEM38_08945 hypothetical protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:hbc00920] D AEM38_15800 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D AEM38_15795 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AEM38_15790 aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AEM38_13380 hypothetical protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AEM38_10615 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AEM38_09160 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AEM38_14765 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AEM38_15765 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AEM38_10810 metX; homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AEM38_00285 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D AEM38_04730 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D AEM38_11410 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D AEM38_04100 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:hbc00061] D AEM38_01420 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AEM38_07810 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AEM38_07815 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AEM38_00135 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AEM38_07880 acyl carrier protein K02078 acpP; acyl carrier protein D AEM38_07890 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AEM38_08055 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AEM38_03335 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AEM38_07875 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AEM38_07885 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_03555 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_03340 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AEM38_08840 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AEM38_01650 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AEM38_04995 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D AEM38_03515 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:hbc00071] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_09040 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_06460 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_11000 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_11215 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_04095 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D AEM38_00295 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AEM38_13685 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:hbc00561] D AEM38_01210 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_13560 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AEM38_08060 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AEM38_09640 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AEM38_11205 acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D AEM38_15915 GDP-mannose-dependent alpha-mannosyltransferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D AEM38_13550 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:hbc00564] D AEM38_12695 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D AEM38_07285 glycerol-3-phosphate dehydrogenase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D AEM38_09640 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AEM38_06905 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AEM38_01725 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AEM38_07380 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AEM38_08870 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AEM38_13690 hypothetical protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D AEM38_11035 hypothetical protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:hbc00600] D AEM38_01350 hypothetical protein K01134 ARSA; arylsulfatase A [EC:3.1.6.8] D AEM38_13550 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:hbc01040] D AEM38_01810 hypothetical protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D AEM38_01540 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AEM38_05225 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:hbc00230] D AEM38_09165 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AEM38_09530 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AEM38_07940 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AEM38_05265 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D AEM38_06780 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AEM38_14960 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D AEM38_12145 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D AEM38_01450 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AEM38_06785 hypothetical protein K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D AEM38_15895 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AEM38_15890 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AEM38_12140 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D AEM38_04540 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AEM38_13520 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AEM38_02210 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AEM38_09525 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AEM38_12455 hypothetical protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D AEM38_07735 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AEM38_06775 ndk; phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AEM38_13295 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AEM38_07710 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AEM38_07860 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D AEM38_15465 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AEM38_15480 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AEM38_09695 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AEM38_09055 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D AEM38_07545 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AEM38_06805 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AEM38_06690 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AEM38_03545 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AEM38_14770 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D AEM38_10645 adenine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D AEM38_04935 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D AEM38_05160 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AEM38_07080 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AEM38_01025 hypothetical protein K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:hbc00240] D AEM38_08285 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AEM38_15040 carbamoyl-phosphate synthase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AEM38_09630 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AEM38_09635 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AEM38_02835 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AEM38_01460 diguanylate cyclase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D AEM38_07535 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AEM38_14920 hypothetical protein K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D AEM38_08885 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D AEM38_06775 ndk; phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AEM38_07080 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AEM38_03435 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AEM38_15120 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AEM38_07600 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D AEM38_00100 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D AEM38_02210 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AEM38_04935 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D AEM38_01710 2-deoxycytidine 5-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D AEM38_15465 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AEM38_15480 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AEM38_09055 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D AEM38_07130 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D AEM38_13725 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AEM38_12790 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AEM38_14305 hypothetical protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:hbc00250] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_09075 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AEM38_12085 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D AEM38_03585 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D AEM38_13085 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_13095 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_13865 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_13965 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_14490 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D AEM38_13240 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AEM38_10835 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AEM38_03545 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AEM38_04540 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AEM38_09630 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AEM38_13405 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AEM38_16085 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AEM38_16080 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AEM38_01790 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AEM38_15920 integrase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AEM38_14285 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_14290 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08335 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08285 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AEM38_15040 carbamoyl-phosphate synthase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AEM38_01450 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AEM38_13495 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AEM38_07940 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:hbc00260] D AEM38_04165 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AEM38_13365 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AEM38_07455 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AEM38_10420 serine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D AEM38_11540 hypothetical protein K01733 thrC; threonine synthase [EC:4.2.3.1] D AEM38_08675 hypothetical protein K01620 ltaE; threonine aldolase [EC:4.1.2.48] D AEM38_07345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AEM38_01210 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D AEM38_14895 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_01935 hypothetical protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_11640 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AEM38_11645 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AEM38_01900 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AEM38_01920 phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D AEM38_14665 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AEM38_07360 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AEM38_06290 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D AEM38_06295 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D AEM38_06275 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_06280 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AEM38_00870 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AEM38_06090 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AEM38_00360 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AEM38_00130 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AEM38_00125 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AEM38_03070 pyridoxal-dependent decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:hbc00270] D AEM38_09160 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AEM38_14765 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AEM38_15765 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AEM38_10610 hypothetical protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AEM38_06720 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AEM38_06725 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AEM38_03130 enterotoxin K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AEM38_14800 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AEM38_10470 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D AEM38_09525 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AEM38_08500 diguanylate phosphodiesterase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D AEM38_00215 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AEM38_13755 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AEM38_04165 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AEM38_13365 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AEM38_07455 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AEM38_10810 metX; homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AEM38_00285 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D AEM38_09475 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AEM38_09425 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AEM38_15855 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_10615 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AEM38_13310 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AEM38_00870 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AEM38_11640 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AEM38_11645 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:hbc00280] D AEM38_09475 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AEM38_00175 hypothetical protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_09040 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_06460 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_11000 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_11215 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D AEM38_07165 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_08415 acetyl-CoA carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D AEM38_06200 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D AEM38_05570 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AEM38_04470 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_04475 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_07370 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D AEM38_07400 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D AEM38_12545 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_10695 hypothetical protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AEM38_06865 hypothetical protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D AEM38_06845 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D AEM38_06850 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D AEM38_15810 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D AEM38_08300 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D AEM38_08295 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hbc00290] D AEM38_06090 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AEM38_00360 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AEM38_15180 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AEM38_14115 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AEM38_15175 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AEM38_14100 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AEM38_14090 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D AEM38_06205 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04580 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AEM38_04595 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AEM38_06700 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AEM38_09475 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AEM38_00175 hypothetical protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D AEM38_09110 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:hbc00300] D AEM38_07455 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AEM38_04165 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AEM38_13365 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AEM38_09130 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AEM38_16170 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D AEM38_03610 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D AEM38_02730 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AEM38_15760 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D AEM38_03625 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AEM38_03550 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AEM38_10845 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AEM38_02020 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AEM38_02025 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:hbc00310] D AEM38_01715 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D AEM38_12825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_13405 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AEM38_07570 CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D AEM38_13720 lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D AEM38_07065 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:hbc00220] D AEM38_02735 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AEM38_13240 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AEM38_10835 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AEM38_01450 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AEM38_14285 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_14290 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08335 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08285 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AEM38_15040 carbamoyl-phosphate synthase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AEM38_01025 hypothetical protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D AEM38_01790 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_09590 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D AEM38_03590 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AEM38_01975 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D AEM38_02730 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AEM38_14795 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:hbc00330] D AEM38_10905 amidase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D AEM38_00435 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D AEM38_01030 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D AEM38_00440 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D AEM38_11955 decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AEM38_13360 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_00185 hypothetical protein K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D AEM38_12965 N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D AEM38_00190 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D AEM38_13400 hypothetical protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D AEM38_09500 hypothetical protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AEM38_15920 integrase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AEM38_12525 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AEM38_00475 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D AEM38_08360 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_07065 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:hbc00340] D AEM38_12420 hypothetical protein K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D AEM38_12425 hypothetical protein K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D AEM38_15745 hypothetical protein K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D AEM38_01775 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D AEM38_15735 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D AEM38_15730 hypothetical protein K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D AEM38_15740 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D AEM38_15725 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D AEM38_03270 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:hbc00350] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_12080 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AEM38_12095 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D AEM38_03180 hypothetical protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D AEM38_13685 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AEM38_13405 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AEM38_03230 hypothetical protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D AEM38_03205 cupin K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D AEM38_03215 fumarylacetoacetate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:hbc00360] D AEM38_06680 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D AEM38_03180 hypothetical protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D AEM38_16035 coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D AEM38_08345 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_13585 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_03230 hypothetical protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D AEM38_12080 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AEM38_07065 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AEM38_12035 hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D AEM38_00295 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AEM38_01625 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:hbc00380] D AEM38_12825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_12035 hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hbc00400] D AEM38_05845 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AEM38_07805 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AEM38_11110 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D AEM38_00095 hypothetical protein K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D AEM38_09025 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D AEM38_07625 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AEM38_07630 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AEM38_07635 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D AEM38_00120 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D AEM38_07640 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D AEM38_00130 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AEM38_00125 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AEM38_13615 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_06680 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:hbc00410] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_06885 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AEM38_10695 hypothetical protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_12545 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:hbc00430] D AEM38_00695 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_14810 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_06435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_11980 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_14490 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D AEM38_01790 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism [PATH:hbc00440] D AEM38_00610 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D AEM38_00965 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D AEM38_00955 phosphonate metabolism protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D AEM38_00960 hypothetical protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D AEM38_00980 phosphonate ABC transporter ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D AEM38_00945 hypothetical protein K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D AEM38_00985 hypothetical protein K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D AEM38_00970 carbon-phosphorus lyase K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D AEM38_07115 PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:hbc00450] D AEM38_10610 hypothetical protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AEM38_06720 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AEM38_06725 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AEM38_03130 enterotoxin K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AEM38_05940 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D AEM38_04120 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D AEM38_09225 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:hbc00460] D AEM38_11885 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_15775 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_03485 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_01340 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AEM38_00695 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_14810 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_06435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_11980 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_12085 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D AEM38_03585 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D AEM38_07345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:hbc00470] D AEM38_07925 hypothetical protein K01775 alr; alanine racemase [EC:5.1.1.1] D AEM38_07065 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AEM38_04865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AEM38_01450 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AEM38_04885 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3] D AEM38_02035 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AEM38_09935 mandelate racemase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D AEM38_03550 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AEM38_10845 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:hbc00480] D AEM38_00695 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_14810 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_06435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_11980 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_09425 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AEM38_15855 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AEM38_06760 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AEM38_14180 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AEM38_07755 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AEM38_00365 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_02240 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_06195 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_04290 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_07095 membrane protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_05800 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D AEM38_09550 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AEM38_07090 hypothetical protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AEM38_11495 alkyl hydroperoxide reductase K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D AEM38_11955 decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:hbc00540] D AEM38_08835 hypothetical protein K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AEM38_04895 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AEM38_08845 hypothetical protein K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AEM38_08830 UDP-2,3-diacylglucosamine pyrophosphatase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AEM38_08825 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AEM38_08445 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AEM38_16160 D-arabinose 5-phosphate K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AEM38_01865 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AEM38_13620 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AEM38_08450 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AEM38_08440 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AEM38_09995 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] C 00542 O-Antigen repeat unit biosynthesis [PATH:hbc00542] D AEM38_08580 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hbc00541] D AEM38_13180 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AEM38_13035 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D AEM38_13185 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_13795 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AEM38_13535 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AEM38_13140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AEM38_13130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AEM38_13125 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AEM38_13135 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AEM38_13170 hypothetical protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AEM38_13805 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AEM38_13815 hypothetical protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D AEM38_05765 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AEM38_13100 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D AEM38_13115 hypothetical protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D AEM38_13070 hypothetical protein K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D AEM38_13090 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:hbc00550] D AEM38_03260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AEM38_04880 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AEM38_02055 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AEM38_02035 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AEM38_02020 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AEM38_04865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AEM38_02025 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AEM38_08875 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AEM38_16075 hypothetical protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AEM38_02030 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AEM38_02045 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AEM38_02230 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AEM38_05380 hypothetical protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AEM38_02015 hypothetical protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:hbc00552] D AEM38_16075 hypothetical protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AEM38_08580 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AEM38_16145 hypothetical protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:hbc00543] D AEM38_13900 hypothetical protein K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D AEM38_08580 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AEM38_10375 hypothetical protein K20997 pslA; polysaccharide biosynthesis protein PslA D AEM38_09160 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:hbc00730] D AEM38_02700 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D AEM38_05905 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AEM38_06455 hypothetical protein K03153 thiO; glycine oxidase [EC:1.4.3.19] D AEM38_14555 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AEM38_06930 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AEM38_07795 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D AEM38_12975 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D AEM38_07315 hypothetical protein K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D AEM38_05160 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AEM38_07785 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:hbc00740] D AEM38_06995 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AEM38_07335 hypothetical protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AEM38_07325 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AEM38_07330 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D AEM38_00650 hypothetical protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D AEM38_09165 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AEM38_10660 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:hbc00750] D AEM38_04710 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AEM38_00380 hypothetical protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D AEM38_11645 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AEM38_06735 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D AEM38_07530 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D AEM38_11540 hypothetical protein K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:hbc00760] D AEM38_09075 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AEM38_09070 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D AEM38_09080 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D AEM38_02210 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AEM38_15840 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D AEM38_07080 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AEM38_07275 hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D AEM38_06410 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D AEM38_07035 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D AEM38_06590 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D AEM38_15430 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AEM38_15435 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AEM38_15440 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D AEM38_11605 isochorismatase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D AEM38_13405 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:hbc00770] D AEM38_06205 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AEM38_04580 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AEM38_04595 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AEM38_06700 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AEM38_07970 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AEM38_06885 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AEM38_05555 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D AEM38_16070 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AEM38_07080 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AEM38_06635 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AEM38_15110 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D AEM38_07525 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AEM38_09475 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:hbc00780] D AEM38_03335 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AEM38_07875 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AEM38_07885 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_03555 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_08840 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AEM38_01650 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AEM38_05550 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:hbc00785] D AEM38_07195 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D AEM38_07015 radical SAM protein K03644 lipA; lipoyl synthase [EC:2.8.1.8] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_06620 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AEM38_08010 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AEM38_08000 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AEM38_07995 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AEM38_12830 sucA; 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AEM38_12825 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AEM38_06290 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D AEM38_06295 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D AEM38_06275 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AEM38_06280 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:hbc00790] D AEM38_01770 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D AEM38_12050 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_00430 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_11635 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_03250 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_09450 hypothetical protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AEM38_02705 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D AEM38_03420 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AEM38_16105 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D AEM38_06995 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AEM38_15305 hypothetical protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D AEM38_10575 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AEM38_12640 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AEM38_06680 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D AEM38_10580 7-cyano-7-deazaguanine reductase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AEM38_10585 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AEM38_04205 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AEM38_12735 hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] C 00670 One carbon pool by folate [PATH:hbc00670] D AEM38_03420 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AEM38_12010 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D AEM38_14040 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AEM38_07345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AEM38_06780 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AEM38_13520 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AEM38_10685 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AEM38_06275 hypothetical protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AEM38_06720 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AEM38_06725 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AEM38_12790 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AEM38_13165 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AEM38_06715 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AEM38_04930 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:hbc00860] D AEM38_14665 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AEM38_07360 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AEM38_05610 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_05885 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_14295 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AEM38_03140 hypothetical protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AEM38_07390 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AEM38_12770 hypothetical protein K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D AEM38_15130 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D AEM38_09415 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D AEM38_15140 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D AEM38_15135 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AEM38_14515 hypothetical protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D AEM38_11565 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AEM38_08025 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AEM38_11140 cobalamin biosynthesis protein CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D AEM38_04050 cobalt chelatase K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D AEM38_12440 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AEM38_08170 hypothetical protein K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D AEM38_08165 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D AEM38_14690 bchH; magnesium chelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1] D AEM38_14715 hypothetical protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D AEM38_14710 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D AEM38_14680 SAM-dependent methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11] D AEM38_14670 magnesium-protoporphyrin IX monomethyl ester cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] D AEM38_14685 chlL; protochlorophyllide oxidoreductase K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7] D AEM38_14700 light-independent protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7] D AEM38_14695 light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7] D AEM38_14355 hypothetical protein K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] D AEM38_14585 chitin-binding protein K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15] D AEM38_14580 chitin-binding protein K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15] D AEM38_14575 chitin deacetylase K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15] D AEM38_14370 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165] D AEM38_14590 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396] D AEM38_14345 geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] D AEM38_02425 hypothetical protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D AEM38_02080 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hbc00130] D AEM38_03935 hypothetical protein K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AEM38_03870 hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D AEM38_10660 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AEM38_04170 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D AEM38_10910 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D AEM38_10705 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D AEM38_06015 ubiquinone biosynthesis protein UbiB K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D AEM38_10540 NADPH-dependent FMN reductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AEM38_12080 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:hbc00900] D AEM38_14555 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AEM38_06930 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AEM38_08865 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D AEM38_07040 hypothetical protein K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D AEM38_04285 hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D AEM38_04150 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D AEM38_08190 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_10660 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AEM38_14400 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D AEM38_06925 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AEM38_14600 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AEM38_04135 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AEM38_08875 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AEM38_14345 geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:hbc00906] D AEM38_14615 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AEM38_01965 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AEM38_14640 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D AEM38_14605 hypothetical protein K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131] D AEM38_14635 CrtD protein K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27] D AEM38_14595 methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:hbc00903] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_06560 hypothetical protein K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8] D AEM38_14050 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:hbc00907] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_05355 short-chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase D AEM38_15810 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D AEM38_13485 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:hbc00523] D AEM38_13140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AEM38_13130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AEM38_13125 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AEM38_13135 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D AEM38_09785 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D AEM38_13130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:hbc00946] D AEM38_11885 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_15775 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_03485 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_01340 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] D AEM38_02890 hypothetical protein K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D AEM38_12685 hypothetical protein K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:hbc00332] D AEM38_12525 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AEM38_00475 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:hbc00261] D AEM38_04165 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AEM38_13365 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AEM38_09130 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AEM38_16170 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:hbc00521] D AEM38_13160 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AEM38_03830 inositol phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AEM38_04920 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AEM38_15785 oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AEM38_13140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AEM38_13130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AEM38_13125 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AEM38_13135 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:hbc00525] D AEM38_13140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AEM38_13130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis D AEM38_01235 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D AEM38_03490 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D AEM38_07625 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AEM38_07630 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D AEM38_07890 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AEM38_07885 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_03555 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_01650 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D AEM38_07880 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:hbc00999] D AEM38_14800 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AEM38_11885 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_15775 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_03485 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D AEM38_01340 hypothetical protein K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:hbc00362] D AEM38_01625 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D AEM38_09090 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_13585 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:hbc00627] D AEM38_10660 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:hbc00364] D AEM38_10435 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AEM38_14855 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AEM38_15075 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:hbc00625] D AEM38_06545 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D AEM38_01000 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D AEM38_13685 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AEM38_01470 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AEM38_03315 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hbc00361] D AEM38_06545 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D AEM38_01000 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D AEM38_10435 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AEM38_14855 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AEM38_15075 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AEM38_03315 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:hbc00623] D AEM38_03230 hypothetical protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D AEM38_10435 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AEM38_14855 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D AEM38_15075 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:hbc00622] D AEM38_03230 hypothetical protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D AEM38_09090 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D AEM38_01625 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:hbc00643] D AEM38_03180 hypothetical protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D AEM38_12095 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:hbc00930] D AEM38_01845 dimethylglycine dehydrogenase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D AEM38_11290 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17] D AEM38_14050 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D AEM38_09205 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D AEM38_10715 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AEM38_04070 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:hbc00621] D AEM38_09090 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D AEM38_01625 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:hbc00626] D AEM38_13685 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:hbc03020] D AEM38_08955 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AEM38_08950 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AEM38_05185 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AEM38_07550 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:hbc03010] D AEM38_00105 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AEM38_08895 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AEM38_05085 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AEM38_14980 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AEM38_05140 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AEM38_07900 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AEM38_08555 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AEM38_05125 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AEM38_01980 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AEM38_05050 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AEM38_05180 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AEM38_08560 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AEM38_05175 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AEM38_05120 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AEM38_15390 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AEM38_00320 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AEM38_05100 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AEM38_07905 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AEM38_05075 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AEM38_10720 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AEM38_15905 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AEM38_08980 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AEM38_05070 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AEM38_05055 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AEM38_05060 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AEM38_05115 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AEM38_05130 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AEM38_08970 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AEM38_07910 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AEM38_08975 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AEM38_08985 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AEM38_01985 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AEM38_05105 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AEM38_05150 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AEM38_05090 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AEM38_05190 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AEM38_05135 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AEM38_15000 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AEM38_13745 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AEM38_05080 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AEM38_05065 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AEM38_05110 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AEM38_08125 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AEM38_12495 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AEM38_12595 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AEM38_05095 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AEM38_05145 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AEM38_12860 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AEM38_07580 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AEM38_08630 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AEM38_13750 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AEM38_03320 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D AEM38_02780 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AEM38_02795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AEM38_02800 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:hbc00970] D AEM38_00085 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AEM38_02790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AEM38_01370 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_02345 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_07220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_08195 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_05645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AEM38_08695 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AEM38_05685 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AEM38_04820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AEM38_07440 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AEM38_11895 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AEM38_08650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AEM38_00620 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AEM38_06450 tRNA-His K14226 tRNA-His; tRNA His D AEM38_02785 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AEM38_06030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_02555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_04955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_07185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_15670 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_06670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AEM38_09800 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AEM38_10595 tRNA-Met K14230 tRNA-Met; tRNA Met D AEM38_06230 tRNA-Met K14230 tRNA-Met; tRNA Met D AEM38_02805 tRNA-Met K14230 tRNA-Met; tRNA Met D AEM38_03450 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AEM38_07230 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AEM38_08035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AEM38_07140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AEM38_05310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AEM38_10370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AEM38_03245 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AEM38_15610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AEM38_05395 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AEM38_09000 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AEM38_08655 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AEM38_00865 tRNA-Val K14237 tRNA-Val; tRNA Val D AEM38_08725 tRNA-Val K14237 tRNA-Val; tRNA Val D AEM38_05750 tRNA-Val K14237 tRNA-Val; tRNA Val D AEM38_05610 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_05885 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_06105 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AEM38_07205 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AEM38_06100 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AEM38_04665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AEM38_06820 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AEM38_08780 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AEM38_08775 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AEM38_13665 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AEM38_10500 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AEM38_01765 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AEM38_09225 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AEM38_10685 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AEM38_05700 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AEM38_13255 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AEM38_10760 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AEM38_12165 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D AEM38_08180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AEM38_05580 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AEM38_12430 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AEM38_13730 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AEM38_16005 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AEM38_04905 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AEM38_14725 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:hbc03060] D AEM38_05155 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AEM38_08995 hypothetical protein K03073 secE; preprotein translocase subunit SecE D AEM38_07605 hypothetical protein K03075 secG; preprotein translocase subunit SecG D AEM38_01945 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AEM38_01950 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AEM38_01940 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AEM38_13425 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D AEM38_02665 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AEM38_15100 hypothetical protein K03071 secB; preprotein translocase subunit SecB D AEM38_00315 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AEM38_00290 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AEM38_09670 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D AEM38_09665 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D AEM38_09660 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D AEM38_07520 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D AEM38_09600 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:hbc04122] D AEM38_05905 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AEM38_10615 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AEM38_02315 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AEM38_03285 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D AEM38_07800 hypothetical protein K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:hbc03018] D AEM38_14145 hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AEM38_06065 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D AEM38_08020 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AEM38_15395 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AEM38_09655 hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D AEM38_08765 helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AEM38_00575 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AEM38_15145 transcription termination factor Rho K03628 rho; transcription termination factor Rho D AEM38_05560 beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D AEM38_16245 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D AEM38_12565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AEM38_03970 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AEM38_07070 hypothetical protein K03666 hfq; host factor-I protein D AEM38_06800 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AEM38_09440 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AEM38_11010 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:hbc03030] D AEM38_15105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AEM38_05595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AEM38_07270 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AEM38_07125 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AEM38_13245 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AEM38_06765 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AEM38_10730 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AEM38_07920 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AEM38_11485 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D AEM38_04410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AEM38_06705 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AEM38_06375 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AEM38_16010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D AEM38_05015 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:hbc03410] D AEM38_13515 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AEM38_06355 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AEM38_10710 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AEM38_03930 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AEM38_14910 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AEM38_05000 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AEM38_07560 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AEM38_04265 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AEM38_09715 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AEM38_14110 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AEM38_16010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D AEM38_07445 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AEM38_05015 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:hbc03420] D AEM38_08905 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AEM38_04405 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AEM38_08635 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AEM38_11030 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AEM38_13325 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AEM38_16010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D AEM38_05015 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:hbc03430] D AEM38_14465 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AEM38_09610 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AEM38_13325 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AEM38_08820 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AEM38_06920 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AEM38_07445 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AEM38_04410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AEM38_05595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AEM38_10730 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AEM38_07270 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AEM38_13245 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AEM38_07125 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AEM38_15105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AEM38_06765 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AEM38_05015 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AEM38_05795 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:hbc03440] D AEM38_07445 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AEM38_04410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AEM38_10735 hypothetical protein K03629 recF; DNA replication and repair protein RecF D AEM38_07505 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D AEM38_07260 recombinase RecR K06187 recR; recombination protein RecR D AEM38_04175 recombinase RecA K03553 recA; recombination protein RecA D AEM38_16010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D AEM38_15825 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D AEM38_15820 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AEM38_15830 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AEM38_05230 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AEM38_05595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AEM38_10730 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AEM38_07270 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AEM38_13245 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AEM38_07125 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AEM38_15105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AEM38_06765 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AEM38_02245 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:hbc02010] D AEM38_15800 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D AEM38_15795 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AEM38_15790 aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AEM38_10340 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D AEM38_06165 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D AEM38_06160 hypothetical protein K02011 afuB; iron(III) transport system permease protein D AEM38_06155 hypothetical protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AEM38_14280 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AEM38_03400 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AEM38_03405 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AEM38_03395 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AEM38_09930 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AEM38_09925 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AEM38_14470 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AEM38_01890 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D AEM38_04345 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AEM38_04350 hypothetical protein K02038 pstA; phosphate transport system permease protein D AEM38_04355 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AEM38_00675 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D AEM38_00670 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D AEM38_00910 hypothetical protein K02042 phnE; phosphonate transport system permease protein D AEM38_00915 hypothetical protein K02042 phnE; phosphonate transport system permease protein D AEM38_00920 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D AEM38_04775 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_01430 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_15045 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_04760 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AEM38_04765 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AEM38_02140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AEM38_13055 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D AEM38_13955 phosphate ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D AEM38_13050 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D AEM38_05585 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D AEM38_05590 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AEM38_10960 hypothetical protein K02196 ccmD; heme exporter protein D D AEM38_10955 hypothetical protein K02195 ccmC; heme exporter protein C D AEM38_10825 hypothetical protein K02194 ccmB; heme exporter protein B D AEM38_10820 hypothetical protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AEM38_06750 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D AEM38_15635 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AEM38_12470 hypothetical protein K09811 ftsX; cell division transport system permease protein D AEM38_12465 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AEM38_03840 hypothetical protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AEM38_00845 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AEM38_05640 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter C 02060 Phosphotransferase system (PTS) [PATH:hbc02060] D AEM38_00310 serine kinase K02784 ptsH; phosphocarrier protein HPr D AEM38_00305 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D AEM38_04160 peptidase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AEM38_15620 nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:hbc03070] D AEM38_11355 hypothetical protein K12340 tolC; outer membrane protein D AEM38_01945 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AEM38_01950 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AEM38_08995 hypothetical protein K03073 secE; preprotein translocase subunit SecE D AEM38_07605 hypothetical protein K03075 secG; preprotein translocase subunit SecG D AEM38_05155 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AEM38_01940 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AEM38_13425 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D AEM38_02665 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AEM38_00290 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AEM38_15100 hypothetical protein K03071 secB; preprotein translocase subunit SecB D AEM38_00315 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AEM38_09670 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D AEM38_09665 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D AEM38_09660 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D AEM38_14235 type VI secretion protein K03197 virB2; type IV secretion system protein VirB2 D AEM38_14230 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3 D AEM38_14220 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D AEM38_14225 type VI secretion protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D AEM38_14200 type VI secretion protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:hbc02020] D AEM38_04340 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AEM38_04365 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AEM38_12050 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_00430 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_11635 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_03250 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D AEM38_14470 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AEM38_01890 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D AEM38_09490 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AEM38_09485 chemotaxis protein CheY K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AEM38_03790 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_01885 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_14940 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_01320 flagellin K02406 fliC; flagellin D AEM38_02170 hypothetical protein K02406 fliC; flagellin D AEM38_02180 hypothetical protein K02406 fliC; flagellin D AEM38_02185 flagellin K02406 fliC; flagellin D AEM38_02190 flagellin K02406 fliC; flagellin D AEM38_02195 flagellin K02406 fliC; flagellin D AEM38_02200 flagellin K02406 fliC; flagellin D AEM38_13315 flagellin K02406 fliC; flagellin D AEM38_13320 flagellin K02406 fliC; flagellin D AEM38_10980 flagellin K02406 fliC; flagellin D AEM38_10985 hypothetical protein K02406 fliC; flagellin D AEM38_10990 flagellin K02406 fliC; flagellin D AEM38_10995 flagellin K02406 fliC; flagellin D AEM38_00775 flagellin K02406 fliC; flagellin D AEM38_16130 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AEM38_10360 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D AEM38_10345 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D AEM38_08025 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AEM38_01240 hypothetical protein K00692 sacB; levansucrase [EC:2.4.1.10] D AEM38_08385 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D AEM38_13470 hypothetical protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AEM38_13475 transcriptional regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D AEM38_00375 malyl-CoA thiolesterase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D AEM38_15270 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D AEM38_15260 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D AEM38_15255 protein kinase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AEM38_15250 hypothetical protein K12510 tadB; tight adherence protein B D AEM38_15245 type II secretion system protein K12511 tadC; tight adherence protein C D AEM38_12225 protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D AEM38_08330 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1 D AEM38_07045 hypothetical protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AEM38_07050 chemotaxis protein CheY K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AEM38_14285 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_14290 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08335 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_07060 ATPase AAA K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_15630 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor D AEM38_11405 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AEM38_11720 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AEM38_11695 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AEM38_12510 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AEM38_11390 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D AEM38_11715 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AEM38_11385 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11710 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11395 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00660 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11705 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11730 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00275 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_05805 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11960 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11400 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_11725 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_08085 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D AEM38_08090 chemotaxis protein CheY K11443 divK; two-component system, cell cycle response regulator DivK D AEM38_11380 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT D AEM38_13355 chemotaxis protein CheY K13584 ctrA; two-component system, cell cycle response regulator CtrA D AEM38_14905 MFS transporter K13589 cpdR; two-component system, cell cycle response regulator CpdR D AEM38_02265 ATPase AAA K10943 flrC; two-component system, response regulator FlrC D AEM38_14560 photosynthetic reaction center subunit M K08929 pufM; photosynthetic reaction center M subunit D AEM38_14565 photosynthetic reaction center subunit L K08928 pufL; photosynthetic reaction center L subunit D AEM38_14570 hypothetical protein K08926 pufA; light-harvesting complex 1 alpha chain D AEM38_14380 hypothetical protein K13991 puhA; photosynthetic reaction center H subunit D AEM38_09405 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AEM38_09400 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AEM38_09395 hypothetical protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AEM38_14335 hypothetical protein K08738 CYC; cytochrome c D AEM38_05390 hypothetical protein K08738 CYC; cytochrome c D AEM38_13625 hypothetical protein K08738 CYC; cytochrome c D AEM38_06475 peptidase S41 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AEM38_06480 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AEM38_06485 cytochrome C oxidase K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AEM38_06490 cytochrome Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AEM38_11355 hypothetical protein K12340 tolC; outer membrane protein D AEM38_08310 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D AEM38_02520 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:hbc04148] D AEM38_11955 decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AEM38_09405 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:hbc02024] D AEM38_07070 hypothetical protein K03666 hfq; host factor-I protein D AEM38_07625 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AEM38_07630 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AEM38_05845 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AEM38_01035 amino acid permease K20265 gadC; glutamate:GABA antiporter D AEM38_10165 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D AEM38_10160 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D AEM38_10155 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D AEM38_10145 hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ D AEM38_10140 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D AEM38_10135 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D AEM38_10130 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D AEM38_11250 hypothetical protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AEM38_07335 hypothetical protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AEM38_09085 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AEM38_04775 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_01430 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_15045 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_04760 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AEM38_04765 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AEM38_02140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AEM38_08720 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AEM38_13425 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D AEM38_08995 hypothetical protein K03073 secE; preprotein translocase subunit SecE D AEM38_07605 hypothetical protein K03075 secG; preprotein translocase subunit SecG D AEM38_05155 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AEM38_01940 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AEM38_02665 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AEM38_00290 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AEM38_15100 hypothetical protein K03071 secB; preprotein translocase subunit SecB D AEM38_00315 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:hbc02030] D AEM38_11695 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AEM38_12510 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AEM38_11385 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11710 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11390 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D AEM38_11715 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AEM38_11395 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00660 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11705 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11730 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00275 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_05805 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11960 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00665 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AEM38_11700 hypothetical protein K03409 cheX; chemotaxis protein CheX D AEM38_11400 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_11725 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_11735 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D AEM38_11405 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AEM38_11720 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AEM38_02280 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AEM38_09340 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AEM38_02270 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AEM38_07190 surface presentation of antigens (spoa) protein K02417 fliN; flagellar motor switch protein FliN D AEM38_16130 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AEM38_07410 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:hbc02040] D AEM38_09300 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D AEM38_02285 hypothetical protein K02409 fliF; flagellar M-ring protein FliF D AEM38_02280 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AEM38_02275 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AEM38_13350 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AEM38_13345 hypothetical protein K02413 fliJ; flagellar protein FliJ D AEM38_02300 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AEM38_09345 hypothetical protein K02415 fliL; flagellar protein FliL D AEM38_09340 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AEM38_02270 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AEM38_07190 surface presentation of antigens (spoa) protein K02417 fliN; flagellar motor switch protein FliN D AEM38_09315 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D AEM38_09320 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AEM38_04195 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AEM38_04190 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D AEM38_02260 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AEM38_04185 hypothetical protein K02401 flhB; flagellar biosynthesis protein FlhB D AEM38_09360 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D AEM38_09310 hypothetical protein K02387 flgB; flagellar basal-body rod protein FlgB D AEM38_09305 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AEM38_02295 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AEM38_02290 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AEM38_09350 hypothetical protein K02391 flgF; flagellar basal-body rod protein FlgF D AEM38_09355 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AEM38_09365 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH D AEM38_09380 flgI; flagellar basal body P-ring biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D AEM38_09385 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D AEM38_02305 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D AEM38_02310 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D AEM38_01320 flagellin K02406 fliC; flagellin D AEM38_02170 hypothetical protein K02406 fliC; flagellin D AEM38_02180 hypothetical protein K02406 fliC; flagellin D AEM38_02185 flagellin K02406 fliC; flagellin D AEM38_02190 flagellin K02406 fliC; flagellin D AEM38_02195 flagellin K02406 fliC; flagellin D AEM38_02200 flagellin K02406 fliC; flagellin D AEM38_13315 flagellin K02406 fliC; flagellin D AEM38_13320 flagellin K02406 fliC; flagellin D AEM38_10980 flagellin K02406 fliC; flagellin D AEM38_10985 hypothetical protein K02406 fliC; flagellin D AEM38_10990 flagellin K02406 fliC; flagellin D AEM38_10995 flagellin K02406 fliC; flagellin D AEM38_00775 flagellin K02406 fliC; flagellin D AEM38_16130 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AEM38_07410 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D AEM38_11480 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D AEM38_15630 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor D AEM38_02265 ATPase AAA K10943 flrC; two-component system, response regulator FlrC C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D AEM38_08020 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:hbc04980] D AEM38_12440 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AEM38_04470 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_04475 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AEM38_06720 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AEM38_06725 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:hbc01501] D AEM38_01675 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AEM38_09685 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AEM38_04775 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_01430 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_15045 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_04760 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AEM38_04765 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AEM38_02140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AEM38_06615 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AEM38_11355 hypothetical protein K12340 tolC; outer membrane protein D AEM38_05380 hypothetical protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AEM38_02015 hypothetical protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:hbc01502] D AEM38_04865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AEM38_07925 hypothetical protein K01775 alr; alanine racemase [EC:5.1.1.1] D AEM38_02025 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AEM38_02030 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AEM38_02045 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hbc01503] D AEM38_03790 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_01885 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_14940 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_06615 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AEM38_11355 hypothetical protein K12340 tolC; outer membrane protein D AEM38_08835 hypothetical protein K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AEM38_08385 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:hbc01000] C 01001 Protein kinases [BR:hbc01001] D AEM38_16265 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AEM38_13970 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AEM38_13845 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AEM38_04340 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AEM38_09490 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AEM38_13470 hypothetical protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AEM38_07045 hypothetical protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AEM38_11385 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11710 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_02520 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:hbc01009] D AEM38_13755 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AEM38_01900 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:hbc01002] D AEM38_09600 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] D AEM38_15280 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D AEM38_07710 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AEM38_03385 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase D AEM38_03745 hypothetical protein K07010 K07010; putative glutamine amidotransferase D AEM38_00845 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AEM38_07940 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AEM38_16085 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AEM38_13495 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AEM38_13085 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_13095 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_13865 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_13965 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AEM38_01845 dimethylglycine dehydrogenase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D AEM38_00210 hypothetical protein K07052 K07052; CAAX protease family protein D AEM38_09570 hypothetical protein K07052 K07052; CAAX protease family protein D AEM38_07755 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AEM38_06825 hypothetical protein K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D AEM38_13735 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D AEM38_02610 hypothetical protein K07386 pepO; putative endopeptidase [EC:3.4.24.-] D AEM38_04455 hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D AEM38_00710 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-] D AEM38_06440 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-] D AEM38_06760 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AEM38_14180 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AEM38_12020 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AEM38_00180 hypothetical protein K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D AEM38_03625 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AEM38_02545 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AEM38_10515 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AEM38_12635 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AEM38_13210 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D AEM38_08860 hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D AEM38_03790 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_01885 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_14940 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_03960 hypothetical protein K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D AEM38_10855 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D AEM38_04295 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D AEM38_14065 hypothetical protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D AEM38_08755 clpP; Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AEM38_15070 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AEM38_08730 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AEM38_05605 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AEM38_07520 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D AEM38_08360 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AEM38_00470 epoxide hydrolase K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-] D AEM38_08365 epoxide hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-] D AEM38_04910 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AEM38_01520 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AEM38_12685 hypothetical protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D AEM38_04805 hypothetical protein K04773 sppA; protease IV [EC:3.4.21.-] D AEM38_03680 hypothetical protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease D AEM38_08215 primosome assembly protein PriA K06904 GP4; Escherichia/Staphylococcus phage prohead protease D AEM38_15715 hypothetical protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D AEM38_12085 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D AEM38_03585 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D AEM38_00695 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_14810 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_06435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_11980 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AEM38_03825 hypothetical protein K03592 pmbA; PmbA protein D AEM38_11580 tldD; protease TldD K03568 tldD; TldD protein D AEM38_12375 hypothetical protein K04087 hflC; modulator of FtsH protease HflC D AEM38_12380 hypothetical protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:hbc01003] D AEM38_15915 GDP-mannose-dependent alpha-mannosyltransferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D AEM38_02230 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AEM38_16145 hypothetical protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D AEM38_08580 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AEM38_01240 hypothetical protein K00692 sacB; levansucrase [EC:2.4.1.10] D AEM38_13655 hypothetical protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] C 01005 Lipopolysaccharide biosynthesis proteins [BR:hbc01005] D AEM38_08835 hypothetical protein K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AEM38_08825 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AEM38_04895 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AEM38_08845 hypothetical protein K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AEM38_08830 UDP-2,3-diacylglucosamine pyrophosphatase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AEM38_08445 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AEM38_08440 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AEM38_08450 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AEM38_09995 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D AEM38_01865 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AEM38_13620 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AEM38_16160 D-arabinose 5-phosphate K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AEM38_04605 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D AEM38_08580 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AEM38_13995 hypothetical protein K13012 wbqP; O-antigen biosynthesis protein WbqP D AEM38_13820 hypothetical protein K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hbc01011] D AEM38_03260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AEM38_04880 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AEM38_02055 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AEM38_02035 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AEM38_02020 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AEM38_04865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AEM38_07925 hypothetical protein K01775 alr; alanine racemase [EC:5.1.1.1] D AEM38_04885 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3] D AEM38_02030 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AEM38_02045 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AEM38_16075 hypothetical protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AEM38_14730 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D AEM38_05380 hypothetical protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AEM38_02015 hypothetical protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AEM38_02230 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D AEM38_04455 hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D AEM38_09135 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AEM38_04260 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AEM38_15090 hypothetical protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D AEM38_07870 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D AEM38_07135 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:hbc01004] D AEM38_07890 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AEM38_08055 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AEM38_03335 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AEM38_07875 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AEM38_07885 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_03555 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AEM38_03340 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AEM38_08840 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AEM38_01650 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AEM38_04995 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D AEM38_03515 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D AEM38_01540 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AEM38_05225 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D AEM38_01810 hypothetical protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D AEM38_06525 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AEM38_07780 long-chain acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D AEM38_08060 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AEM38_09640 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:hbc01006] D AEM38_06925 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AEM38_14600 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AEM38_04135 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AEM38_08875 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AEM38_14615 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AEM38_01965 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AEM38_01905 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AEM38_03935 hypothetical protein K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AEM38_11565 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AEM38_14355 hypothetical protein K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] C 01007 Amino acid related enzymes [BR:hbc01007] D AEM38_12165 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D AEM38_05610 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_05885 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_05990 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AEM38_04905 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AEM38_14725 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AEM38_01765 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AEM38_08180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AEM38_09225 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AEM38_10760 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AEM38_05700 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AEM38_13255 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AEM38_06820 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AEM38_12430 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AEM38_08780 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AEM38_08775 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AEM38_10500 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AEM38_05580 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AEM38_13665 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AEM38_04665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AEM38_13730 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AEM38_16005 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AEM38_11440 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AEM38_07460 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D AEM38_15760 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D AEM38_14665 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AEM38_07360 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AEM38_10695 hypothetical protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D AEM38_02730 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AEM38_13360 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D AEM38_14295 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AEM38_03140 hypothetical protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AEM38_07065 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AEM38_09475 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AEM38_11645 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:hbc00199] C 00194 Photosynthesis proteins [BR:hbc00194] D AEM38_12370 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AEM38_12360 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AEM38_12350 hypothetical protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AEM38_12345 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AEM38_12340 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AEM38_06305 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AEM38_06310 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AEM38_06315 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AEM38_06320 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AEM38_06325 hypothetical protein K02116 atpI; ATP synthase protein I D AEM38_14565 photosynthetic reaction center subunit L K08928 pufL; photosynthetic reaction center L subunit D AEM38_14560 photosynthetic reaction center subunit M K08929 pufM; photosynthetic reaction center M subunit D AEM38_14380 hypothetical protein K13991 puhA; photosynthetic reaction center H subunit D AEM38_14570 hypothetical protein K08926 pufA; light-harvesting complex 1 alpha chain B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:hbc03000] D AEM38_00215 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AEM38_14910 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AEM38_09780 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AEM38_03455 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AEM38_14060 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D AEM38_06260 hypothetical protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D AEM38_01580 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AEM38_03500 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AEM38_00950 hypothetical protein K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D AEM38_15190 hypothetical protein K03710 K03710; GntR family transcriptional regulator D AEM38_16050 hypothetical protein K03710 K03710; GntR family transcriptional regulator D AEM38_02375 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D AEM38_13460 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AEM38_16065 hypothetical protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D AEM38_12295 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D AEM38_05680 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D AEM38_15330 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AEM38_11250 hypothetical protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AEM38_05900 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D AEM38_00555 hypothetical protein K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D AEM38_06950 ArsR family transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D AEM38_11810 hypothetical protein K10947 K10947; PadR family transcriptional regulator D AEM38_05550 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AEM38_16270 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D AEM38_12330 DNA-binding protein K07726 K07726; putative transcriptional regulator D AEM38_02390 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator D AEM38_10225 DNA-binding protein K07726 K07726; putative transcriptional regulator D AEM38_08595 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator D AEM38_13570 Cro/Cl family transcriptional regulator K07729 K07729; putative transcriptional regulator D AEM38_08425 Cro/Cl family transcriptional regulator K07729 K07729; putative transcriptional regulator D AEM38_15920 integrase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AEM38_11125 hypothetical protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D AEM38_10200 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AEM38_14885 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AEM38_11170 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D AEM38_00335 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D AEM38_07785 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D AEM38_06285 hypothetical protein K07734 paiB; transcriptional regulator D AEM38_11500 hypothetical protein K07735 algH; putative transcriptional regulator D AEM38_09370 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D AEM38_07340 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D AEM38_01290 transcriptional regulator K14414 rtcR; transcriptional regulatory protein RtcR C 03021 Transcription machinery [BR:hbc03021] D AEM38_05185 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AEM38_08955 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AEM38_08950 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AEM38_07550 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AEM38_11480 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D AEM38_15410 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AEM38_12725 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AEM38_12120 RNA polymerase sigma 70 K03089 rpoH; RNA polymerase sigma-32 factor D AEM38_01690 RNA polymerase sigma 70 K03089 rpoH; RNA polymerase sigma-32 factor D AEM38_15630 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor D AEM38_15345 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D AEM38_07320 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D AEM38_08990 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AEM38_09370 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D AEM38_08290 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D AEM38_15145 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:hbc03019] D AEM38_06065 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D AEM38_03440 hypothetical protein K08301 rng; ribonuclease G [EC:3.1.26.-] D AEM38_07515 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D AEM38_05560 beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D AEM38_09655 hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D AEM38_08765 helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AEM38_00575 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AEM38_08020 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AEM38_15395 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AEM38_15145 transcription termination factor Rho K03628 rho; transcription termination factor Rho D AEM38_16245 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D AEM38_12565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AEM38_03970 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AEM38_07070 hypothetical protein K03666 hfq; host factor-I protein D AEM38_06800 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AEM38_09440 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AEM38_11010 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D AEM38_14145 hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AEM38_06085 hypothetical protein K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:hbc03011] D AEM38_00105 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AEM38_08895 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AEM38_05085 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AEM38_14980 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AEM38_05140 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AEM38_07900 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AEM38_08555 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AEM38_05125 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AEM38_01980 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AEM38_05050 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AEM38_05180 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AEM38_08560 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AEM38_05175 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AEM38_05120 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AEM38_15390 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AEM38_00320 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AEM38_05100 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AEM38_07905 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AEM38_05075 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AEM38_10720 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AEM38_15905 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AEM38_08980 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AEM38_05070 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AEM38_05055 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AEM38_05060 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AEM38_05115 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AEM38_05130 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AEM38_07910 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AEM38_08975 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AEM38_08985 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AEM38_08970 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AEM38_01985 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AEM38_05105 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AEM38_05150 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AEM38_05090 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AEM38_05190 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AEM38_05135 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AEM38_15000 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AEM38_13745 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AEM38_05080 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AEM38_05065 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AEM38_05110 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AEM38_12495 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AEM38_12595 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AEM38_05095 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AEM38_05145 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AEM38_12860 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AEM38_07580 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AEM38_08630 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AEM38_13750 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AEM38_03320 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D AEM38_08125 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AEM38_02800 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AEM38_02780 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AEM38_02795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:hbc03009] D AEM38_07515 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D AEM38_07510 GTPase Era K03595 era; GTPase D AEM38_12530 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D AEM38_09370 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D AEM38_15345 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D AEM38_07320 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D AEM38_08990 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AEM38_09290 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D AEM38_06730 hypothetical protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AEM38_07725 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AEM38_13205 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AEM38_09295 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AEM38_04700 DNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AEM38_09435 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AEM38_14875 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AEM38_02005 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AEM38_15870 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AEM38_04215 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D AEM38_08665 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AEM38_06695 ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D AEM38_01510 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D AEM38_14135 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AEM38_02325 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D AEM38_00685 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AEM38_04235 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D AEM38_09565 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AEM38_05250 hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D AEM38_09105 hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D AEM38_04500 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AEM38_05210 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D AEM38_11175 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D AEM38_15325 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D AEM38_05775 hypothetical protein K02860 rimM; 16S rRNA processing protein RimM D AEM38_15400 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D AEM38_10505 hypothetical protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D AEM38_06065 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D AEM38_03440 hypothetical protein K08301 rng; ribonuclease G [EC:3.1.26.-] D AEM38_08805 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AEM38_08765 helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AEM38_07075 GTPase HflX K03665 hflX; GTPase D AEM38_11435 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AEM38_07545 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AEM38_15380 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D AEM38_15340 hypothetical protein K09748 rimP; ribosome maturation factor RimP D AEM38_01505 ribosome-associated protein IOJAP K09710 ybeB; ribosome-associated protein D AEM38_15625 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D AEM38_08140 GTP-binding protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:hbc03016] D AEM38_01395 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D AEM38_01295 Fis family transcriptional regulator K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D AEM38_05610 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_05885 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_05580 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AEM38_10760 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AEM38_13255 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AEM38_09225 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AEM38_08180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AEM38_06820 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AEM38_04665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AEM38_13665 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AEM38_10500 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AEM38_01765 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AEM38_05700 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AEM38_12430 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AEM38_13730 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AEM38_16005 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AEM38_04905 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AEM38_14725 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AEM38_07675 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AEM38_15230 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D AEM38_14740 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D AEM38_15385 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D AEM38_05905 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AEM38_11435 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AEM38_01905 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AEM38_14865 hypothetical protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D AEM38_14870 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AEM38_13380 hypothetical protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AEM38_13430 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D AEM38_16275 bacterial RNase P K01978 rnpB; M1 RNA D AEM38_15060 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D AEM38_06815 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D AEM38_15650 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D AEM38_01550 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D AEM38_12165 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D AEM38_08780 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AEM38_08775 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AEM38_05990 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AEM38_00625 DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D AEM38_04115 CMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D AEM38_09230 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D AEM38_15205 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D AEM38_01735 2-methylthioadenine synthase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D AEM38_09725 tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D AEM38_15005 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D AEM38_09410 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D AEM38_14130 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D AEM38_02315 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AEM38_05950 FeS assembly scaffold SufA K13628 iscA; iron-sulfur cluster assembly protein D AEM38_08355 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D AEM38_16140 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D AEM38_06655 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D AEM38_10585 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AEM38_10575 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AEM38_10580 7-cyano-7-deazaguanine reductase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AEM38_04205 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AEM38_02235 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D AEM38_06660 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D AEM38_15320 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D AEM38_12765 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AEM38_00400 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D AEM38_09655 hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D AEM38_15395 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AEM38_15970 twitching motility protein PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:hbc03012] D AEM38_15355 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AEM38_11315 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AEM38_14995 glycosyl transferase family 1 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D AEM38_08890 elongation factor Ts K02357 tsf; elongation factor Ts D AEM38_08545 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AEM38_08645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AEM38_08550 fusA; elongation factor G K02355 fusA; elongation factor G D AEM38_12590 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D AEM38_08880 ribosome-recycling factor K02838 frr; ribosome recycling factor D AEM38_03955 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D AEM38_08130 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D AEM38_03430 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D AEM38_00700 elongation factor P K02356 efp; elongation factor P D AEM38_00705 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D AEM38_06080 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D AEM38_04020 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D AEM38_11450 peptide chain release factor I K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:hbc03110] D AEM38_07690 clpA; Clp protease ClpX K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D AEM38_04330 ATPase AAA K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D AEM38_08750 Clp protease ATP-binding protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D AEM38_15710 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D AEM38_16245 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D AEM38_12565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AEM38_08410 molecular chaperone Hsp70 K04046 yegD; hypothetical chaperone protein D AEM38_03970 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AEM38_12570 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AEM38_04705 hypothetical protein K05516 cbpA; curved DNA-binding protein D AEM38_02740 hypothetical protein K04083 hslO; molecular chaperone Hsp33 D AEM38_00340 hypothetical protein K03687 GRPE; molecular chaperone GrpE D AEM38_00255 heat-shock protein K04080 ibpA; molecular chaperone IbpA D AEM38_11185 hypothetical protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D AEM38_03965 molecular chaperone GroES K04078 groES; chaperonin GroES D AEM38_03790 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_01885 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_14940 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AEM38_12635 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AEM38_06320 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AEM38_15100 hypothetical protein K03071 secB; preprotein translocase subunit SecB D AEM38_05850 hypothetical protein K09796 pccA; periplasmic copper chaperone A D AEM38_07620 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D AEM38_15335 hypothetical protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AEM38_14935 thioredoxin K03671 TXN; thioredoxin D AEM38_00630 thioredoxin K05838 ybbN; putative thioredoxin D AEM38_04690 glutaredoxin K03676 grxC; glutaredoxin 3 D AEM38_14975 glutaredoxin K07390 grxD; monothiol glutaredoxin D AEM38_10965 hypothetical protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:hbc04131] D AEM38_06775 ndk; phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AEM38_02130 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D AEM38_13005 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AEM38_13020 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AEM38_14895 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_15310 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:hbc03032] D AEM38_06705 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AEM38_00215 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AEM38_14760 hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D AEM38_12285 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D AEM38_08050 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AEM38_00110 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AEM38_07920 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AEM38_11485 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D AEM38_04410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AEM38_05595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AEM38_10730 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AEM38_06765 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AEM38_13245 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AEM38_07125 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AEM38_15105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AEM38_07270 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AEM38_06375 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AEM38_16010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D AEM38_05015 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AEM38_05795 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AEM38_06630 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AEM38_10740 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AEM38_07435 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AEM38_07245 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AEM38_09650 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:hbc03036] D AEM38_00215 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AEM38_07515 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D AEM38_13005 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AEM38_12285 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D AEM38_08050 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AEM38_00110 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AEM38_04705 hypothetical protein K05516 cbpA; curved DNA-binding protein D AEM38_06685 DNA-binding protein K11940 hspQ; heat shock protein HspQ D AEM38_01085 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D AEM38_07070 hypothetical protein K03666 hfq; host factor-I protein D AEM38_13460 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AEM38_06335 hypothetical protein K03529 smc; chromosome segregation protein D AEM38_09680 hypothetical protein K05896 scpA; segregation and condensation protein A D AEM38_09675 hypothetical protein K06024 scpB; segregation and condensation protein B D AEM38_04875 hypothetical protein K03590 ftsA; cell division protein FtsA D AEM38_12465 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AEM38_02015 hypothetical protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AEM38_12645 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AEM38_02010 hypothetical protein K03586 ftsL; cell division protein FtsL D AEM38_04870 hypothetical protein K03589 ftsQ; cell division protein FtsQ D AEM38_02040 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AEM38_12470 hypothetical protein K09811 ftsX; cell division transport system permease protein D AEM38_04890 hypothetical protein K03531 ftsZ; cell division protein FtsZ D AEM38_00495 hypothetical protein K09888 zapA; cell division protein ZapA D AEM38_12555 ATPase K06916 zapE; cell division protein ZapE D AEM38_05360 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AEM38_05385 hypothetical protein K05837 rodA; rod shape determining protein RodA D AEM38_06895 ATPase K03496 parA; chromosome partitioning protein D AEM38_14880 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AEM38_10200 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AEM38_14885 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AEM38_07435 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AEM38_07245 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AEM38_14870 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AEM38_14875 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AEM38_09725 tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D AEM38_14160 hypothetical protein K03733 xerC; integrase/recombinase XerC D AEM38_13340 recombinase XerD K04763 xerD; integrase/recombinase XerD D AEM38_12385 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AEM38_11820 addiction module protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D AEM38_13420 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:hbc03400] D AEM38_14915 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AEM38_07475 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AEM38_11675 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AEM38_11670 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AEM38_06355 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AEM38_13515 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AEM38_08760 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D AEM38_09620 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AEM38_09585 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AEM38_04630 phosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AEM38_13725 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AEM38_12560 dioxygenase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D AEM38_07560 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AEM38_04265 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AEM38_03930 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AEM38_14910 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D AEM38_05000 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AEM38_10710 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AEM38_09715 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AEM38_14110 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AEM38_07445 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AEM38_05015 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AEM38_16010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D AEM38_04405 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D AEM38_08635 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AEM38_11030 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AEM38_13325 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AEM38_08955 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AEM38_08950 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AEM38_05185 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AEM38_07550 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AEM38_08905 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AEM38_14465 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AEM38_09610 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AEM38_08820 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AEM38_06920 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AEM38_05595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AEM38_10730 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AEM38_06765 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AEM38_13245 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AEM38_07125 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AEM38_15105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AEM38_07270 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AEM38_04410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AEM38_05795 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AEM38_04175 recombinase RecA K03553 recA; recombination protein RecA D AEM38_15825 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D AEM38_15820 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AEM38_15830 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AEM38_02245 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AEM38_10735 hypothetical protein K03629 recF; DNA replication and repair protein RecF D AEM38_05230 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AEM38_07505 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D AEM38_07260 recombinase RecR K06187 recR; recombination protein RecR D AEM38_05010 hypothetical protein K03631 recN; DNA repair protein RecN (Recombination protein N) D AEM38_14930 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D AEM38_14925 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D AEM38_01475 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D AEM38_06630 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AEM38_10740 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AEM38_09650 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AEM38_12285 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D AEM38_08050 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AEM38_00110 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AEM38_00575 helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AEM38_08095 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D AEM38_05605 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AEM38_04420 hypothetical protein K14160 imuA; protein ImuA D AEM38_04425 hypothetical protein K14161 imuB; protein ImuB D AEM38_04430 DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D AEM38_00490 helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D AEM38_15465 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AEM38_15480 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:hbc03029] D AEM38_09400 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AEM38_15355 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AEM38_11315 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AEM38_08890 elongation factor Ts K02357 tsf; elongation factor Ts D AEM38_08545 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AEM38_08645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AEM38_08550 fusA; elongation factor G K02355 fusA; elongation factor G D AEM38_07510 GTPase Era K03595 era; GTPase D AEM38_04905 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AEM38_13255 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AEM38_06820 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AEM38_08180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AEM38_06105 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AEM38_07205 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AEM38_06100 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AEM38_14760 hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D AEM38_04410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AEM38_08855 membrane protein K07277 SAM50; outer membrane protein insertion porin family D AEM38_16245 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D AEM38_12565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AEM38_00340 hypothetical protein K03687 GRPE; molecular chaperone GrpE D AEM38_03970 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AEM38_03965 molecular chaperone GroES K04078 groES; chaperonin GroES D AEM38_12570 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AEM38_05905 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AEM38_14975 glutaredoxin K07390 grxD; monothiol glutaredoxin D AEM38_09520 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D AEM38_12385 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AEM38_11565 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AEM38_11560 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AEM38_08025 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AEM38_13425 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D AEM38_11545 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D AEM38_01840 hypothetical protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:hbc02000] D AEM38_03840 hypothetical protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AEM38_00845 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AEM38_05640 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D AEM38_01870 multidrug ABC transporter ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AEM38_00940 multidrug ABC transporter ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AEM38_12865 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AEM38_13855 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AEM38_04035 elongation factor 3 K15738 uup; ABC transport system ATP-binding/permease protein D AEM38_10340 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D AEM38_15800 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D AEM38_15795 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D AEM38_15790 aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AEM38_06165 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D AEM38_06160 hypothetical protein K02011 afuB; iron(III) transport system permease protein D AEM38_06155 hypothetical protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AEM38_14280 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AEM38_03400 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AEM38_03405 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AEM38_03395 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AEM38_12270 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AEM38_12260 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D AEM38_12265 hypothetical protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D AEM38_09930 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AEM38_09925 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AEM38_09915 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D AEM38_14470 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AEM38_01890 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D AEM38_04345 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AEM38_04350 hypothetical protein K02038 pstA; phosphate transport system permease protein D AEM38_04355 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AEM38_00675 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D AEM38_00670 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D AEM38_00910 hypothetical protein K02042 phnE; phosphonate transport system permease protein D AEM38_00915 hypothetical protein K02042 phnE; phosphonate transport system permease protein D AEM38_00920 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D AEM38_04775 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_01430 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_15045 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D AEM38_04760 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D AEM38_04765 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D AEM38_02140 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D AEM38_08720 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AEM38_10050 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AEM38_10045 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AEM38_10040 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AEM38_09155 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D AEM38_09150 hypothetical protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D AEM38_09145 hypothetical protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D AEM38_13055 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D AEM38_13955 phosphate ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D AEM38_13050 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D AEM38_06750 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D AEM38_15635 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AEM38_10940 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein D AEM38_10935 hypothetical protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D AEM38_10945 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component D AEM38_05585 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D AEM38_05590 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AEM38_10960 hypothetical protein K02196 ccmD; heme exporter protein D D AEM38_10955 hypothetical protein K02195 ccmC; heme exporter protein C D AEM38_10825 hypothetical protein K02194 ccmB; heme exporter protein B D AEM38_10820 hypothetical protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AEM38_12470 hypothetical protein K09811 ftsX; cell division transport system permease protein D AEM38_12465 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AEM38_02470 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D AEM38_02475 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AEM38_07105 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AEM38_02725 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D AEM38_12955 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AEM38_01330 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AEM38_15235 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AEM38_02465 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AEM38_07100 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AEM38_12945 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AEM38_01530 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AEM38_01070 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D AEM38_10460 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AEM38_04395 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AEM38_01535 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AEM38_01065 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AEM38_10455 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AEM38_04400 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AEM38_05930 sufC; cysteine desulfurase K09013 sufC; Fe-S cluster assembly ATP-binding protein D AEM38_01480 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D AEM38_06385 hypothetical protein K26939 norM; MATE family, multidrug efflux pump D AEM38_05345 cation transporter K26937 dinF; MATE family, multidrug efflux pump D AEM38_03480 glucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D AEM38_10240 hypothetical protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AEM38_01220 hypothetical protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D AEM38_09945 hypothetical protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D AEM38_14350 bacteriochlorophyll synthase K08226 pucC; MFS transporter, BCD family, chlorophyll transporter D AEM38_14375 protein pucC K08226 pucC; MFS transporter, BCD family, chlorophyll transporter D AEM38_01675 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AEM38_06095 hypothetical protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D AEM38_13765 hypothetical protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D AEM38_08700 hypothetical protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D AEM38_15310 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D AEM38_04160 peptidase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AEM38_00310 serine kinase K02784 ptsH; phosphocarrier protein HPr D AEM38_00305 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D AEM38_15620 nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D AEM38_05240 hypothetical protein K08714 VGSC; voltage-gated sodium channel D AEM38_08430 hypothetical protein K08713 lctB; potassium channel LctB D AEM38_04925 hypothetical protein K08715 IRPC; inward rectifier potassium channel D AEM38_14165 ammonia channel protein K03320 amt; ammonium transporter, Amt family D AEM38_00365 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_02240 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_06195 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_04290 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_07095 membrane protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AEM38_01425 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog D AEM38_00115 hypothetical protein K03282 mscL; large conductance mechanosensitive channel D AEM38_11600 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D AEM38_07180 magnesium transporter K06213 mgtE; magnesium transporter D AEM38_16130 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AEM38_07410 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D AEM38_00445 hypothetical protein K03561 exbB; biopolymer transport protein ExbB D AEM38_00450 hypothetical protein K03559 exbD; biopolymer transport protein ExbD D AEM38_00455 hypothetical protein K03559 exbD; biopolymer transport protein ExbD D AEM38_12600 hypothetical protein K03562 tolQ; biopolymer transport protein TolQ D AEM38_12605 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D AEM38_05280 hypothetical protein K03284 corA; magnesium transporter D AEM38_05255 hypothetical protein K06199 crcB; fluoride exporter D AEM38_11100 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AEM38_02515 hypothetical protein K16079 omp31; outer membrane immunogenic protein D AEM38_02950 hypothetical protein K12686 apeE; outer membrane lipase/esterase D AEM38_01665 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D AEM38_10055 hypothetical protein K16092 btuB; vitamin B12 transporter D AEM38_01360 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_05860 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_00425 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_14525 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_16175 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_03105 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_03145 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_07790 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_00595 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_06330 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_06425 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_02420 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_02460 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_11875 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_03190 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_03255 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_08965 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_09005 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_10245 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_11255 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_15805 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_00415 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_00880 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_10310 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_01575 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_02440 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_11985 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_03950 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_08615 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_04790 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_04795 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_14085 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AEM38_11355 hypothetical protein K12340 tolC; outer membrane protein D AEM38_14790 hypothetical protein K18904 nodT; outer membrane protein, multidrug efflux system D AEM38_01055 hypothetical protein K18904 nodT; outer membrane protein, multidrug efflux system D AEM38_10445 hypothetical protein K18904 nodT; outer membrane protein, multidrug efflux system D AEM38_10405 hypothetical protein K20987 pslD; polysaccharide biosynthesis/export protein PslD D AEM38_12040 hypothetical protein K07267 oprB; porin D AEM38_11690 hypothetical protein K07267 oprB; porin D AEM38_08855 membrane protein K07277 SAM50; outer membrane protein insertion porin family D AEM38_07960 hypothetical protein K17713 bamB; outer membrane protein assembly factor BamB D AEM38_05005 transporter K05807 bamD; outer membrane protein assembly factor BamD D AEM38_10025 hypothetical protein K21449 ata; trimeric autotransporter adhesin D AEM38_14250 hypothetical protein K21449 ata; trimeric autotransporter adhesin D AEM38_15645 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D AEM38_06745 hypothetical protein K04744 lptD; LPS-assembly protein D AEM38_13250 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D AEM38_15215 hypothetical protein K06189 corC; hemolysin (HlyC) family protein D AEM38_01250 sugar transporter K16211 malY; maltose/moltooligosaccharide transporter D AEM38_01035 amino acid permease K20265 gadC; glutamate:GABA antiporter D AEM38_06615 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AEM38_06970 membrane protein K15268 eamA; O-acetylserine/cysteine efflux transporter D AEM38_13370 hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD D AEM38_09085 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AEM38_11115 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D AEM38_11120 hypothetical protein K03313 nhaA; Na+:H+ antiporter, NhaA family D AEM38_00355 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D AEM38_00350 hypothetical protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D AEM38_15035 potassium transporter TrkA K03455 KEA1_2_3; K+:H+ antiporter D AEM38_14730 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D AEM38_08350 hypothetical protein K13936 mdcF; malonate transporter and related proteins D AEM38_08810 hypothetical protein K13936 mdcF; malonate transporter and related proteins D AEM38_13230 trkD; potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D AEM38_15015 amino acid transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein D AEM38_10360 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D AEM38_10345 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D AEM38_14520 membrane protein K22736 VIT; vacuolar iron transporter family protein D AEM38_07980 MarC family transcriptional regulator K05595 marC; multiple antibiotic resistance protein D AEM38_02040 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AEM38_02130 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D AEM38_12620 hypothetical protein K03640 pal; peptidoglycan-associated lipoprotein D AEM38_12615 tolB; translocation protein TolB K03641 tolB; TolB protein D AEM38_07305 hppA; pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D AEM38_08705 hypothetical protein K03543 emrA; membrane fusion protein, multidrug efflux system D AEM38_13970 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AEM38_13845 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AEM38_01805 TspO K05770 TSPO; translocator protein D AEM38_03780 cytochrome C biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:hbc02044] D AEM38_11355 hypothetical protein K12340 tolC; outer membrane protein D AEM38_00845 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D AEM38_15280 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D AEM38_15270 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D AEM38_15260 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D AEM38_15255 protein kinase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AEM38_15250 hypothetical protein K12510 tadB; tight adherence protein B D AEM38_15245 type II secretion system protein K12511 tadC; tight adherence protein C D AEM38_14035 membrane protein K02221 yggT; YggT family protein D AEM38_02260 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AEM38_04185 hypothetical protein K02401 flhB; flagellar biosynthesis protein FlhB D AEM38_02285 hypothetical protein K02409 fliF; flagellar M-ring protein FliF D AEM38_02275 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AEM38_13350 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AEM38_02270 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AEM38_07190 surface presentation of antigens (spoa) protein K02417 fliN; flagellar motor switch protein FliN D AEM38_09315 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D AEM38_09320 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AEM38_04195 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AEM38_04190 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D AEM38_14235 type VI secretion protein K03197 virB2; type IV secretion system protein VirB2 D AEM38_14230 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3 D AEM38_14225 type VI secretion protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D AEM38_14220 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D AEM38_14200 type VI secretion protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D AEM38_10165 conjugal transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D AEM38_10160 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D AEM38_10155 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D AEM38_10135 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D AEM38_10130 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D AEM38_10145 hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ D AEM38_10140 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D AEM38_02950 hypothetical protein K12686 apeE; outer membrane lipase/esterase D AEM38_10035 hypothetical protein K04338 csgF; curli production assembly/transport component CsgF D AEM38_02665 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AEM38_15100 hypothetical protein K03071 secB; preprotein translocase subunit SecB D AEM38_01945 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AEM38_08995 hypothetical protein K03073 secE; preprotein translocase subunit SecE D AEM38_01950 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AEM38_07605 hypothetical protein K03075 secG; preprotein translocase subunit SecG D AEM38_05155 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AEM38_00315 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AEM38_00290 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D AEM38_01940 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AEM38_13425 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D AEM38_09670 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D AEM38_09665 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D AEM38_09660 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:hbc02042] D AEM38_11100 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AEM38_08920 hemolysin III K11068 hlyIII; hemolysin III D AEM38_12230 hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:hbc02022] D AEM38_04340 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AEM38_04365 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AEM38_09490 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AEM38_09485 chemotaxis protein CheY K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AEM38_13470 hypothetical protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AEM38_13475 transcriptional regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D AEM38_01190 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D AEM38_16210 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D AEM38_03755 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D AEM38_03795 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D AEM38_01280 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D AEM38_07045 hypothetical protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AEM38_07050 chemotaxis protein CheY K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AEM38_07060 ATPase AAA K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D AEM38_11385 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11710 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11395 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00660 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11705 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11730 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00275 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_05805 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11960 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11400 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_11725 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_08085 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D AEM38_08090 chemotaxis protein CheY K11443 divK; two-component system, cell cycle response regulator DivK D AEM38_13355 chemotaxis protein CheY K13584 ctrA; two-component system, cell cycle response regulator CtrA D AEM38_14905 MFS transporter K13589 cpdR; two-component system, cell cycle response regulator CpdR D AEM38_02265 ATPase AAA K10943 flrC; two-component system, response regulator FlrC D AEM38_02520 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:hbc02035] D AEM38_11385 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11710 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AEM38_11390 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D AEM38_11715 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AEM38_11700 hypothetical protein K03409 cheX; chemotaxis protein CheX D AEM38_11735 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D AEM38_11405 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AEM38_11720 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AEM38_11400 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_11725 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AEM38_11395 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00660 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11705 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11730 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00275 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_05805 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_11960 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AEM38_00665 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AEM38_11695 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AEM38_12510 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AEM38_02275 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AEM38_13350 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AEM38_13345 hypothetical protein K02413 fliJ; flagellar protein FliJ D AEM38_09315 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D AEM38_09320 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AEM38_04195 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AEM38_04190 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D AEM38_02260 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AEM38_04185 hypothetical protein K02401 flhB; flagellar biosynthesis protein FlhB D AEM38_02280 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AEM38_09340 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AEM38_02270 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AEM38_07190 surface presentation of antigens (spoa) protein K02417 fliN; flagellar motor switch protein FliN D AEM38_02285 hypothetical protein K02409 fliF; flagellar M-ring protein FliF D AEM38_09380 flgI; flagellar basal body P-ring biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D AEM38_09360 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D AEM38_09365 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH D AEM38_09345 hypothetical protein K02415 fliL; flagellar protein FliL D AEM38_09300 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D AEM38_02300 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AEM38_09310 hypothetical protein K02387 flgB; flagellar basal-body rod protein FlgB D AEM38_09305 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AEM38_02295 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AEM38_09350 hypothetical protein K02391 flgF; flagellar basal-body rod protein FlgF D AEM38_09355 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AEM38_09385 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D AEM38_02290 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AEM38_02305 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D AEM38_02310 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D AEM38_01320 flagellin K02406 fliC; flagellin D AEM38_02170 hypothetical protein K02406 fliC; flagellin D AEM38_02180 hypothetical protein K02406 fliC; flagellin D AEM38_02185 flagellin K02406 fliC; flagellin D AEM38_02190 flagellin K02406 fliC; flagellin D AEM38_02195 flagellin K02406 fliC; flagellin D AEM38_02200 flagellin K02406 fliC; flagellin D AEM38_13315 flagellin K02406 fliC; flagellin D AEM38_13320 flagellin K02406 fliC; flagellin D AEM38_10980 flagellin K02406 fliC; flagellin D AEM38_10985 hypothetical protein K02406 fliC; flagellin D AEM38_10990 flagellin K02406 fliC; flagellin D AEM38_10995 flagellin K02406 fliC; flagellin D AEM38_00775 flagellin K02406 fliC; flagellin D AEM38_16130 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AEM38_07410 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D AEM38_02265 ATPase AAA K10943 flrC; two-component system, response regulator FlrC D AEM38_12310 hypothetical protein K06602 flaF; flagellar biosynthesis activator protein FlaF D AEM38_12315 flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT D AEM38_02255 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF D AEM38_02250 hypothetical protein K04562 flhG; flagellar biosynthesis protein FlhG D AEM38_15280 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D AEM38_15270 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D AEM38_15260 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D AEM38_15255 protein kinase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:hbc04812] D AEM38_05360 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AEM38_04890 hypothetical protein K03531 ftsZ; cell division protein FtsZ D AEM38_04875 hypothetical protein K03590 ftsA; cell division protein FtsA D AEM38_06895 ATPase K03496 parA; chromosome partitioning protein D AEM38_14880 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AEM38_10200 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AEM38_14885 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:hbc04147] D AEM38_13005 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D AEM38_08020 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AEM38_13020 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AEM38_13010 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AEM38_12020 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AEM38_03970 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AEM38_16245 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D AEM38_12565 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AEM38_01485 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AEM38_04295 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D AEM38_11290 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17] D AEM38_07735 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AEM38_08545 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AEM38_08645 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AEM38_07675 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AEM38_12870 hypothetical protein K01045 PON; arylesterase / paraoxonase [EC:3.1.1.2 3.1.8.1] D AEM38_06130 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00220 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_02090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_00155 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_14275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_04075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_08325 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AEM38_13755 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AEM38_05160 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AEM38_10835 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AEM38_13240 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AEM38_16095 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6] D AEM38_13560 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AEM38_14285 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_14290 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_08335 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AEM38_07390 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AEM38_12080 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D AEM38_12640 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AEM38_11640 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AEM38_13520 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AEM38_07975 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_12815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AEM38_13635 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D AEM38_07615 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AEM38_14895 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AEM38_15960 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:hbc02048] D AEM38_00080 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D AEM38_10085 hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D AEM38_00060 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D AEM38_00075 SAM-dependent methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D AEM38_05795 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AEM38_06365 modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72] D AEM38_00215 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AEM38_16265 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D AEM38_16270 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D AEM38_04510 hypothetical protein K19163 ccdB; toxin CcdB D AEM38_04515 hypothetical protein K19164 ccdA; antitoxin CcdA D AEM38_05485 death-on-curing protein K07341 doc; death on curing protein D AEM38_10065 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D AEM38_10070 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D AEM38_10100 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1 D AEM38_15970 twitching motility protein PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D AEM38_15975 hypothetical protein K18829 mvpT; antitoxin VapB D AEM38_04890 hypothetical protein K03531 ftsZ; cell division protein FtsZ D AEM38_05360 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AEM38_07435 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AEM38_07245 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AEM38_05610 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_05885 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AEM38_08925 hypothetical protein K09159 cptB; antitoxin CptB D AEM38_05905 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:hbc04090] D AEM38_04295 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:hbc01504] D AEM38_06095 hypothetical protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D AEM38_13765 hypothetical protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D AEM38_08385 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D AEM38_06615 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AEM38_11355 hypothetical protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:hbc00536] D AEM38_12230 hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hbc00537] D AEM38_12020 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AEM38_12230 hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:hbc03100] D AEM38_00085 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AEM38_02790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AEM38_01370 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_02345 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_07220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_08195 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AEM38_05645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AEM38_08695 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AEM38_05685 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AEM38_04820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AEM38_07440 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AEM38_11895 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AEM38_08650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AEM38_00620 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AEM38_06450 tRNA-His K14226 tRNA-His; tRNA His D AEM38_02785 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AEM38_06030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_02555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_04955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_07185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_15670 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AEM38_06670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AEM38_09800 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AEM38_10595 tRNA-Met K14230 tRNA-Met; tRNA Met D AEM38_06230 tRNA-Met K14230 tRNA-Met; tRNA Met D AEM38_02805 tRNA-Met K14230 tRNA-Met; tRNA Met D AEM38_03450 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AEM38_07230 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AEM38_08035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AEM38_07140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AEM38_05310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AEM38_10370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AEM38_03245 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AEM38_15610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AEM38_05395 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AEM38_09000 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AEM38_08655 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AEM38_00865 tRNA-Val K14237 tRNA-Val; tRNA Val D AEM38_08725 tRNA-Val K14237 tRNA-Val; tRNA Val D AEM38_05750 tRNA-Val K14237 tRNA-Val; tRNA Val D AEM38_02780 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AEM38_02795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AEM38_02800 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AEM38_16275 bacterial RNase P K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D AEM38_03115 histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D AEM38_06900 aldo/keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432] D AEM38_03170 hypothetical protein K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D AEM38_03165 pyruvate dehydrogenase K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D AEM38_02160 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AEM38_09950 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AEM38_01780 alcohol dehydrogenase K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1] D AEM38_07495 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D AEM38_10600 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D AEM38_06220 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D AEM38_04270 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D AEM38_10900 hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5] D AEM38_14850 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AEM38_10785 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AEM38_03580 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AEM38_12840 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AEM38_14500 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AEM38_08100 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D AEM38_08590 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D AEM38_09430 oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11] D AEM38_08575 hypothetical protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D AEM38_09180 hypothetical protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AEM38_11680 alkyl hydroperoxide reductase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D AEM38_11685 alkyl hydroperoxide reductase K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D AEM38_10545 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AEM38_16110 hypothetical protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D AEM38_04945 hypothetical protein K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235] D AEM38_15780 alkanesulfonate monooxygenase K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181] D AEM38_03425 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D AEM38_15315 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AEM38_02215 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AEM38_05690 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AEM38_07490 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D AEM38_01040 putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6] D AEM38_15750 hypothetical protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D AEM38_06190 3-oxoacyl-ACP synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D AEM38_15220 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D AEM38_07415 hypothetical protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D AEM38_00465 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D AEM38_09515 hypothetical protein K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D AEM38_15125 phosphate kinase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D AEM38_03805 hypothetical protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D AEM38_08160 selenoprotein O K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D AEM38_03200 hypothetical protein K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D AEM38_15815 CoA-transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D AEM38_01600 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D AEM38_14425 hypothetical protein K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D AEM38_11245 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AEM38_15910 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AEM38_01995 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D AEM38_16020 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D AEM38_12220 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D AEM38_07120 LuxR family transcriptional regulator K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AEM38_12800 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D AEM38_01685 hypothetical protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D AEM38_01215 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170] D AEM38_00885 hypothetical protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D AEM38_06965 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AEM38_10690 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AEM38_08735 acyl-homoserine-lactone acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D AEM38_03510 penicillin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D AEM38_04685 amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D AEM38_04850 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AEM38_01555 galactarate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D AEM38_09445 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D AEM38_06180 hypothetical protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D AEM38_07150 AMP-dependent synthetase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D AEM38_11020 fatty acid--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D AEM38_15010 hypothetical protein K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D AEM38_01305 RNA 3'-terminal-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D AEM38_06505 hypothetical protein K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D AEM38_01005 hypothetical protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D AEM38_00300 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D AEM38_11180 ferredoxin K05524 fdxA; ferredoxin D AEM38_13630 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D AEM38_13275 hypothetical protein K06997 yggS; PLP dependent protein D AEM38_11005 hypothetical protein K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D AEM38_08690 hypothetical protein K16567 exoQ; exopolysaccharide production protein ExoQ C 99987 Cofactor metabolism D AEM38_14645 hypothetical protein K06049 bchO; magnesium chelatase accessory protein D AEM38_02445 membrane protein K12942 abgT; aminobenzoyl-glutamate transport protein D AEM38_12970 membrane protein K12942 abgT; aminobenzoyl-glutamate transport protein D AEM38_11145 ubiquinone biosynthesis protein K18586 COQ4; ubiquinone biosynthesis protein COQ4 D AEM38_15900 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D AEM38_07020 hypothetical protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D AEM38_03005 hypothetical protein K15977 K15977; putative oxidoreductase D AEM38_05995 hypothetical protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D AEM38_11455 cold-shock protein K03704 cspA; cold shock protein D AEM38_07240 hypothetical protein K03704 cspA; cold shock protein D AEM38_15845 cold-shock protein K03704 cspA; cold shock protein D AEM38_04385 nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation C 99975 Protein processing D AEM38_07695 Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D AEM38_04970 trigger factor K03545 tig; trigger factor D AEM38_09125 SsrA-binding protein K03664 smpB; SsrA-binding protein D AEM38_15850 ATPase AAA K07391 comM; magnesium chelatase family protein D AEM38_09220 hypothetical protein K11208 yncG; GST-like protein C 99976 Replication and repair D AEM38_02540 hypothetical protein K03630 radC; DNA repair protein RadC D AEM38_12060 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D AEM38_15865 hypothetical protein K07460 yraN; putative endonuclease D AEM38_06225 excinuclease ABC subunit C K07461 K07461; putative endonuclease D AEM38_09645 DNA processing protein DprA K04096 smf; DNA processing protein D AEM38_05220 ATPase AAA K07478 ycaJ; putative ATPase D AEM38_08245 hypothetical protein K06919 K06919; putative DNA primase/helicase D AEM38_05785 transposase K07484 K07484; transposase D AEM38_05790 hypothetical protein K07484 K07484; transposase D AEM38_10210 hypothetical protein K07484 K07484; transposase D AEM38_10215 transposase K07484 K07484; transposase D AEM38_02920 hypothetical protein K07484 K07484; transposase D AEM38_02925 transposase K07484 K07484; transposase D AEM38_13785 transposase K07484 K07484; transposase D AEM38_13790 hypothetical protein K07484 K07484; transposase D AEM38_14325 hypothetical protein K07486 K07486; transposase D AEM38_11135 hypothetical protein K07486 K07486; transposase D AEM38_11515 hypothetical protein K07486 K07486; transposase D AEM38_02645 hypothetical protein K07486 K07486; transposase D AEM38_12710 hypothetical protein K07486 K07486; transposase D AEM38_00025 hypothetical protein K14059 int; integrase C 99979 Viral proteins C 99998 Others D AEM38_07265 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D AEM38_01345 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AEM38_02405 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AEM38_05710 sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AEM38_10290 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AEM38_10630 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AEM38_07085 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AEM38_11865 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AEM38_04210 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D AEM38_01875 peptide ABC transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D AEM38_15490 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AEM38_13555 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AEM38_14720 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AEM38_03100 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D AEM38_08685 Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D AEM38_10850 hypothetical protein K06190 ispZ; intracellular septation protein D AEM38_01515 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility D AEM38_05955 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins D AEM38_02485 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D AEM38_02595 GTP-binding protein TypA K06207 typA; GTP-binding protein D AEM38_02680 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D AEM38_11945 hypothetical protein K07275 ompW; outer membrane protein D AEM38_06250 hypothetical protein K07340 ybbJ; inner membrane protein D AEM38_01060 RND transporter K02005 ABC.CD.TX; HlyD family secretion protein D AEM38_14780 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein D AEM38_01785 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA D AEM38_03770 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AEM38_03785 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AEM38_04155 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D AEM38_04360 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D AEM38_02085 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin D AEM38_04125 membrane protein K05794 terC; tellurite resistance protein TerC D AEM38_00975 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D AEM38_01720 hypothetical protein K06195 apaG; ApaG protein D AEM38_06955 membrane protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D AEM38_03605 tRNA-binding protein K06878 K06878; tRNA-binding protein D AEM38_06835 hypothetical protein K07001 K07001; NTE family protein D AEM38_04645 hypothetical protein K07001 K07001; NTE family protein D AEM38_11970 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D AEM38_03595 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D AEM38_05910 cysteine desulfurase K09014 sufB; Fe-S cluster assembly protein SufB D AEM38_05935 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D AEM38_03990 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D AEM38_05965 LemA family protein K03744 lemA; LemA protein D AEM38_11935 membrane protein K03744 lemA; LemA protein D AEM38_15940 hypothetical protein K03745 slyX; SlyX protein D AEM38_11025 hypothetical protein K05805 creA; CreA protein D AEM38_05975 hypothetical protein K08988 K08988; putative membrane protein D AEM38_14945 membrane protein K08989 K08989; putative membrane protein D AEM38_01310 PhnA protein K06193 phnA; protein PhnA C 99997 Function unknown D AEM38_05970 hypothetical protein K06872 K06872; uncharacterized protein D AEM38_06960 hydrolase K06889 K06889; uncharacterized protein D AEM38_12065 membrane protein K06890 K06890; uncharacterized protein D AEM38_02225 hypothetical protein K06923 K06923; uncharacterized protein D AEM38_08175 hypothetical protein K06938 K06938; uncharacterized protein D AEM38_12875 hypothetical protein K06953 K06953; uncharacterized protein D AEM38_11330 peptidase K06973 K06973; uncharacterized protein D AEM38_03885 hypothetical protein K06975 K06975; uncharacterized protein D AEM38_07730 hypothetical protein K06977 K06977; uncharacterized protein D AEM38_02450 antibiotic hydrolase K06978 K06978; uncharacterized protein D AEM38_15930 hypothetical protein K06995 K06995; uncharacterized protein D AEM38_00755 glyoxalase K06996 K06996; uncharacterized protein D AEM38_05600 bleomycin resistance protein K06996 K06996; uncharacterized protein D AEM38_05895 alpha/beta hydrolase K07018 K07018; uncharacterized protein D AEM38_12180 metal-dependent hydrolase K07045 K07045; uncharacterized protein D AEM38_04245 hypothetical protein K07054 K07054; uncharacterized protein D AEM38_04060 hypothetical protein K07064 K07064; uncharacterized protein D AEM38_02710 SulA-family protein K07071 K07071; uncharacterized protein D AEM38_12155 permease K07086 K07086; uncharacterized protein D AEM38_06240 hypothetical protein K07086 K07086; uncharacterized protein D AEM38_00545 membrane protein K07090 K07090; uncharacterized protein D AEM38_01745 permease K07090 K07090; uncharacterized protein D AEM38_15755 membrane protein K07090 K07090; uncharacterized protein D AEM38_09235 hypothetical protein K07090 K07090; uncharacterized protein D AEM38_05020 hypothetical protein K07093 K07093; uncharacterized protein D AEM38_11990 hypothetical protein K07124 K07124; uncharacterized protein D AEM38_13225 dehydrogenase K07124 K07124; uncharacterized protein D AEM38_09895 hypothetical protein K07126 K07126; uncharacterized protein D AEM38_09900 hypothetical protein K07126 K07126; uncharacterized protein D AEM38_10410 hypothetical protein K07126 K07126; uncharacterized protein D AEM38_11320 hypothetical protein K07126 K07126; uncharacterized protein D AEM38_00820 hypothetical protein K07133 K07133; uncharacterized protein D AEM38_03855 hypothetical protein K07136 K07136; uncharacterized protein D AEM38_00635 peptidase S16 K07157 K07157; uncharacterized protein D AEM38_13670 hypothetical protein K08998 K08998; uncharacterized protein D AEM38_07235 hypothetical protein K09005 K09005; uncharacterized protein D AEM38_04240 hypothetical protein K09160 K09160; uncharacterized protein D AEM38_07485 hypothetical protein K09701 K09701; uncharacterized protein D AEM38_04370 cupin K09705 K09705; uncharacterized protein D AEM38_03860 hypothetical protein K09768 K09768; uncharacterized protein D AEM38_15185 hypothetical protein K09780 K09780; uncharacterized protein D AEM38_12690 hypothetical protein K09780 K09780; uncharacterized protein D AEM38_13395 ABC transporter K09781 K09781; uncharacterized protein D AEM38_00640 hypothetical protein K09791 K09791; uncharacterized protein D AEM38_04975 hypothetical protein K09797 K09797; uncharacterized protein D AEM38_11585 hypothetical protein K09803 K09803; uncharacterized protein D AEM38_06235 hypothetical protein K09807 K09807; uncharacterized protein D AEM38_04650 hypothetical protein K09861 K09861; uncharacterized protein D AEM38_03445 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D AEM38_07665 hypothetical protein K09919 K09919; uncharacterized protein D AEM38_14155 hypothetical protein K09921 K09921; uncharacterized protein D AEM38_04255 hypothetical protein K09931 K09931; uncharacterized protein D AEM38_07990 hypothetical protein K09946 K09946; uncharacterized protein D AEM38_02695 hypothetical protein K09962 K09962; uncharacterized protein D AEM38_03875 hypothetical protein K09965 K09965; uncharacterized protein D AEM38_03890 hypothetical protein K09966 K09966; uncharacterized protein D AEM38_13580 hypothetical protein K09973 K09973; uncharacterized protein D AEM38_12410 hypothetical protein K09985 K09985; uncharacterized protein D AEM38_04855 hypothetical protein K09986 K09986; uncharacterized protein D AEM38_00585 hypothetical protein K09987 K09987; uncharacterized protein D AEM38_00565 von Willebrand factor A K09989 K09989; uncharacterized protein D AEM38_05695 hypothetical protein K09991 K09991; uncharacterized protein D AEM38_05300 hypothetical protein K07276 K07276; uncharacterized protein D AEM38_15350 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 30, 2024