+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Halotia branconii

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ACRISPR-Cas system B Universal Cas proteins C QI031_14630 cas1d; type I-D CRISPR-associated endonuclease Cas1d K15342 cas1; CRISP-associated protein Cas1 C QI031_02105 cas1d; type I-D CRISPR-associated endonuclease Cas1d K15342 cas1; CRISP-associated protein Cas1 C QI031_14625 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 C QI031_24490 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 C QI031_02100 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D QI031_14680 cas3; type I-D CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D QI031_02130 cas3; type I-D CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D QI031_14635 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D QI031_02110 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D QI031_14640 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D QI031_02115 cas6; CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors D QI031_14635 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D QI031_02110 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D QI031_14635 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D QI031_02110 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D QI031_14645 cas5d; type I-D CRISPR-associated protein Cas5/Csc1 K19120 csc1; CRISPR-associated protein Csc1 D QI031_02120 cas5d; type I-D CRISPR-associated protein Cas5/Csc1 K19120 csc1; CRISPR-associated protein Csc1 D QI031_14650 cas7d; type I-D CRISPR-associated protein Cas7/Csc2 K19121 csc2; CRISPR-associated protein Csc2 D QI031_02125 cas7d; type I-D CRISPR-associated protein Cas7/Csc2 K19121 csc2; CRISPR-associated protein Csc2 D QI031_14655 cas10d; type I-D CRISPR-associated protein Cas10d/Csc3 K19122 csc3; CRISPR-associated protein Csc3 D QI031_14635 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D QI031_02110 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D QI031_14640 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D QI031_02115 cas6; CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D QI031_14635 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D QI031_02110 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors D QI031_21130 type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2 D QI031_21125 type III-B CRISPR module-associated Cmr3 family protein K09127 cmr3; CRISPR-associated protein Cmr3 D QI031_21120 cmr4; type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4 D QI031_21105 hypothetical protein K19142 cmr6; CRISPR-associated protein Cmr6 C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C QI031_13340 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C QI031_13305 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C QI031_16805 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D QI031_06240 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D QI031_16390 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D QI031_17485 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D QI031_07945 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D QI031_22505 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QI031_24815 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QI031_30415 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D QI031_02170 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C QI031_31515 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D QI031_10235 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_18365 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_22540 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_25915 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_28060 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_28410 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_29415 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_00505 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D QI031_22535 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE D QI031_28065 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE D QI031_10230 ribbon-helix-helix domain-containing protein K26986 mazE6; antitoxin MazE6 D QI031_25910 CopG family transcriptional regulator K26989 mazE9; antitoxin MazE9 C ChpB-ChpS C YhaV-PrlF D QI031_01435 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] C RelE/StbE-RelB/StbD D QI031_07205 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D QI031_16830 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D QI031_22720 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D QI031_00865 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE C YafQ-dinJ C YoeB-YefM D QI031_13525 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D QI031_17295 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D QI031_17290 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD D QI031_12075 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D QI031_12665 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D QI031_19320 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D QI031_21680 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D QI031_03735 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D QI031_12670 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D QI031_19325 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D QI031_24960 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D QI031_21700 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein C HigB-HigA D QI031_20625 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D QI031_24760 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D QI031_25925 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D QI031_25920 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB D QI031_08245 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D QI031_10665 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D QI031_11445 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D QI031_13810 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D QI031_16090 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D QI031_17160 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D QI031_04830 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D QI031_07230 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D QI031_08250 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D QI031_01870 hypothetical protein K21495 fitA; antitoxin FitA D QI031_01905 hypothetical protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D QI031_00635 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D QI031_10310 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D QI031_11925 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C QI031_08010 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C QI031_28985 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C QI031_04240 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C QI031_22925 DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB C QI031_00480 dndC; DNA phosphorothioation system sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC C QI031_00270 AAA family ATPase K19171 dndD; DNA sulfur modification protein DndD C QI031_00495 dndD; DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD C QI031_00510 dndE; DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023