+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Hemicordylus capensis (graceful crag lizard)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 128332648 FBL; rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 128326852 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 128339765 NOP58; nucleolar protein 58 K14565 NOP58; nucleolar protein 58 D 128326762 SNU13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 128335338 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 128327837 GAR1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 128342374 NHP2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 128331765 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 128328059 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D 128346329 SHQ1; protein SHQ1 homolog isoform X1 K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 128339710 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 128344878 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 128335202 MPHOSPH10; U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 128330571 NGDN; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 128328470 RRP7A; ribosomal RNA-processing protein 7 homolog A isoform X1 K14545 RRP7; ribosomal RNA-processing protein 7 D 128350293 PWP2; periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 128325947 NOP14; nucleolar protein 14 K14766 NOP14; nucleolar protein 14 D 128328257 UTP3; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 128334232 UTP4; U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 128349716 WDR43; WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 128345270 UTP6; U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 128345250 WDR46; WD repeat-containing protein 46 isoform X1 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 128346622 HEATR1; HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 128333165 UTP11; probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 128341872 WDR3; WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 128336497 TBL3; transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 128335346 UTP14A; U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 128342995 UTP15; U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 128334990 WDR75; WD repeat-containing protein 75 isoform X1 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 128348299 UTP18; U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 128337768 NOC4L; nucleolar complex protein 4 homolog isoform X1 K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 128326055 UTP20; small subunit processome component 20 homolog isoform X1 K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 128344513 WDR36; WD repeat-containing protein 36 isoform X1 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 128343438 NOL6; nucleolar protein 6 isoform X1 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 128323770 UTP23; rRNA-processing protein UTP23 homolog isoform X1 K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 128349975 FCF1; rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 128351252 UTP25; U3 small nucleolar RNA-associated protein 25 homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 128336367 RSL1D1; ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 128352155 DDX10; probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 128340200 DDX18; ATP-dependent RNA helicase DDX18 isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 128328336 DDX47; probable ATP-dependent RNA helicase DDX47 isoform X1 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 128345951 DDX49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 128336254 DDX52; probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 128326214 DHX15; ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 128337932 DHX37; probable ATP-dependent RNA helicase DHX37 isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 128322359 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 128351617 BMS1; ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 128324988 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3] D 128338787 REXO4; RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 128333373 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 128334332 CSNK2A2; casein kinase II subunit alpha' K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 128323891 casein kinase II subunit alpha-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 128323932 CSNK2A1; casein kinase II subunit alpha isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 128345276 CSNK2B; casein kinase II subunit beta isoform X1 K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 128336174 AATF; protein AATF isoform X1 K14782 AATF; protein AATF/BFR2 D 128350461 CMSS1; protein CMSS1 isoform X1 K14784 CMS1; protein CMS1 D 128342837 EMG1; ribosomal RNA small subunit methyltransferase NEP1 isoform X1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 128348265 ABT1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein D 128343582 KRI1; protein KRI1 homolog K14786 KRI1; protein KRI1 D 128327239 KRR1; KRR1 small subunit processome component homolog isoform X1 K06961 KRR1; ribosomal RNA assembly protein D 128337938 RBM19; probable RNA-binding protein 19 isoform X1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 128340319 NAT10; RNA cytidine acetyltransferase isoform X1 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 128350726 NCL; nucleolin isoform X1 K11294 NCL; nucleolin D 128340494 NOL10; nucleolar protein 10 isoform X1 K14788 NOL10; ribosome biogenesis protein ENP2 D 128330269 NOP9; nucleolar protein 9 isoform X1 K14790 NOP9; nucleolar protein 9 D 128324359 PINX1; PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1 K11135 PINX1; Pin2-interacting protein X1 D 128327349 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 128344905 RCL1; RNA 3'-terminal phosphate cyclase-like protein isoform X1 K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 128351877 PDCD11; protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5 D 128344981 RRP9; U3 small nucleolar RNA-interacting protein 2 isoform X1 K14793 RRP9; ribosomal RNA-processing protein 9 D 128352161 RRP12; RRP12-like protein isoform X1 K14794 RRP12; ribosomal RNA-processing protein 12 D 128352847 RRP36; ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 128322360 DCAF13; DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 128322675 RIOK1; serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 128344196 RIOK2; serine/threonine-protein kinase RIO2 isoform X1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 128346945 DIMT1; probable dimethyladenosine transferase isoform X1 K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 128335919 BUD23; probable 18S rRNA (guanine-N(7))-methyltransferase isoform X1 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 128331666 METTL5; rRNA N6-adenosine-methyltransferase METTL5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 128322955 BYSL; bystin isoform X1 K14797 ENP1; essential nuclear protein 1 D 128342744 LTV1; protein LTV1 homolog isoform X1 K14798 LTV1; protein LTV1 D 128334608 NOB1; RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D 128339951 PNO1; RNA-binding protein PNO1 isoform X1 K11884 PNO1; RNA-binding protein PNO1 D 128323174 RNA-binding protein PNO1 K11884 PNO1; RNA-binding protein PNO1 D 128337899 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 128346902 AK6; adenylate kinase isoenzyme 6 isoform X1 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 128334042 TSR1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 128344785 TSR2; pre-rRNA-processing protein TSR2 homolog isoform X1 K14800 TSR2; pre-rRNA-processing protein TSR2 D 128336605 TSR3; 18S rRNA aminocarboxypropyltransferase K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 128334414 PDCD2L; programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4 D 128345619 PDCD2; programmed cell death protein 2 isoform X1 K14801 TSR4; pre-rRNA-processing protein TSR4 D 128326361 RPS19BP1; active regulator of SIRT1 K26536 RPS19BP1; active regulator of SIRT1 D 128323760 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1 D 128330053 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 128345519 TNPO1; transportin-1 K18752 TNPO1; transportin-1 D 128331573 IPO4; importin-4 K20221 IPO4; importin-4 D 128349724 IPO5; importin-5 isoform X1 K20222 IPO5; importin-5 D 128341121 IPO7; importin-7 K20223 IPO7; importin-7 D 128323414 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9 C Other pre-40S particles D 128326209 ATP8A1; phospholipid-transporting ATPase IA isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 128350210 ATP8A2; phospholipid-transporting ATPase IB isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 128334816 EIF3J; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 128326195 ABCE1; ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 128344174 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 128340200 DDX18; ATP-dependent RNA helicase DDX18 isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 128352010 DDX21; nucleolar RNA helicase 2 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 128340472 DDX24; ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 128323111 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 128339087 DDX31; probable ATP-dependent RNA helicase DDX31 isoform X1 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 128337770 DDX51; ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 128338211 DDX54; ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 128338119 DDX55; ATP-dependent RNA helicase DDX55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 128333694 DDX56; probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 128341742 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 128343322 GNL3; guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein D 128346055 GNL3L; guanine nucleotide-binding protein-like 3-like protein isoform X1 K14538 NUG1; nuclear GTP-binding protein D 128332941 GNL2; nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein D 128331719 GTPBP4; GTP-binding protein 4 isoform X1 K06943 NOG1; nucleolar GTP-binding protein D 128352063 LSG1; large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 128334864 EFL1; elongation factor-like GTPase 1 isoform X1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 128333484 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-] D 128336535 REXO5; RNA exonuclease 5 isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 128344657 RNA exonuclease 1 homolog isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 128346489 REXO1; RNA exonuclease 1 homolog isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 128349829 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D 128323293 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 128324790 POP1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 128334150 POP4; ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 128337802 POP5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 128350281 RPP30; ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E 128329852 POP7; ribonuclease P protein subunit p20 isoform X1 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E 128335004 RPP25; ribonuclease P protein subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 128346637 RPP25L; ribonuclease P protein subunit p25-like protein isoform X1 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 128331934 RPP38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] E 128323862 RPP40; ribonuclease P protein subunit p40 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D 128338504 NOL9; polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 128330153 ABCF2; ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 128348124 DNAJC21; dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 128322416 EIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D 128332898 heat shock cognate 71 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 128333731 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 128337151 heat shock 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 128337152 heat shock 70 kDa protein II-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 128340524 HSPA2; heat shock-related 70 kDa protein 2 K26598 HSPA2; heat shock 70kDa protein 2 D 128327432 mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 128338351 MRTO4; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 128351849 NMD3; 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D 128337089 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor D 128335709 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2 D 128337899 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 128324502 ZNF622; cytoplasmic 60S subunit biogenesis factor ZNF622 K14816 REI1; pre-60S factor REI1 D 128335906 SBDS; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 128326036 SPATA5; ribosome biogenesis protein SPATA5 isoform X1 K14575 AFG2; AAA family ATPase D 128335147 SPATA5L1; ribosome biogenesis protein SPATA5L1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 128346785 CINP; cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein D 128332435 C7H1orf109; ribosome biogenesis protein C1orf109 homolog isoform X1 K26053 C1ORF109; ribosome biogenesis protein C1orf109 D 128323760 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1 D 128330053 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 128345519 TNPO1; transportin-1 K18752 TNPO1; transportin-1 D 128331573 IPO4; importin-4 K20221 IPO4; importin-4 D 128349724 IPO5; importin-5 isoform X1 K20222 IPO5; importin-5 D 128341121 IPO7; importin-7 K20223 IPO7; importin-7 D 128323414 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9 D 128345713 DUSP12; dual specificity protein phosphatase 12 isoform X1 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 128330262 TEX10; testis-expressed protein 10 K14827 IPI1; pre-rRNA-processing protein IPI1 D 128346606 WDR18; WD repeat-containing protein 18 isoform X1 K14829 IPI3; pre-rRNA-processing protein IPI3 D 128335411 LAS1L; ribosomal biogenesis protein LAS1L isoform X1 K16912 LAS1; ribosomal biogenesis protein LAS1 D 128329039 PELP1; proline-, glutamic acid- and leucine-rich protein 1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1 D 128331727 SENP3; sentrin-specific protease 3 K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68] C Ribosome quality control proteins D 128350797 LTN1; E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 128334567 TCF25; transcription factor 25 K24970 TCF25; transcription factor 25 D 128339641 NEMF; ribosome quality control complex subunit NEMF isoform X1 K24971 NEMF; nuclear export mediator factor NEMF D 128345300 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D 128346037 transitional endoplasmic reticulum ATPase-like K13525 VCP; transitional endoplasmic reticulum ATPase D 128342439 NPLOC4; nuclear protein localization protein 4 homolog isoform X1 K14015 NPLOC4; nuclear protein localization protein 4 D 128338231 UFD1; ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1 D 128324580 PTRHD1; putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 128343617 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 isoform X1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 128348127 BRIX1; ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1 D 128333269 ZNF593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20 D 128340171 CCDC86; coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1 D 128322346 EBNA1BP2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2 D 128322776 BOP1; ribosome biogenesis protein BOP1 K14824 ERB1; ribosome biogenesis protein ERB1 D 128323417 TMED5; transmembrane emp24 domain-containing protein 5 K14825 TMED5; p24 family protein gamma-2 D 128323397 PAK1IP1; p21-activated protein kinase-interacting protein 1 isoform X1 K14830 MAK11; protein MAK11 D 128333943 MAK16; protein MAK16 homolog K14831 MAK16; protein MAK16 D 128347755 CEBPZ; CCAAT/enhancer-binding protein zeta isoform X1 K14832 MAK21; ribosome biogenesis protein MAK21 D 128341193 MDN1; midasin isoform X1 K14572 MDN1; midasin D 128334201 NIP7; 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 128338415 NOC2L; nucleolar complex protein 2 homolog isoform X1 K14833 NOC2; nucleolar complex protein 2 D 128349517 NOC3L; nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 128347742 NOP2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 128328272 RBM28; RNA-binding protein 28 K14573 NOP4; nucleolar protein 4 D 128347042 NOL8; nucleolar protein 8 K14836 NOP8; nucleolar protein 8 D 128346346 RBM34; RNA-binding protein 34 isoform X1 K14837 NOP12; nucleolar protein 12 D 128352429 NIFK; MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15 D 128333288 NOP53; ribosome biogenesis protein NOP53 isoform X1 K14840 NOP53; nucleolar protein 53 D 128337092 WDR74; WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 128343496 NSA2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 128337941 PES1; pescadillo homolog isoform X1 K14843 PES1; pescadillo D 128344339 PUM3; pumilio homolog 3 isoform X1 K14844 PUF6; pumilio homology domain family member 6 D 128327349 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 128341589 DXO; decapping and exoribonuclease protein isoform X1 K14845 RAI1; RAT1-interacting protein D 128334145 RIOX1; ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 128351491 RIOX2; ribosomal oxygenase 2 isoform X1 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D 128350216 NVL; nuclear valosin-containing protein-like isoform X1 K14571 RIX7; ribosome biogenesis ATPase D 128322719 RPF1; ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 128349158 RPF2; ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 128330275 GRWD1; glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 128349562 RRP1B; ribosomal RNA processing protein 1 homolog B isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1 D 128350068 RRP8; ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 128352161 RRP12; RRP12-like protein isoform X1 K14794 RRP12; ribosomal RNA-processing protein 12 D 128327672 NOL12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 128324109 RRS1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 128335897 NLE1; notchless protein homolog 1 isoform X1 K14855 RSA4; ribosome assembly protein 4 D 128326344 SDAD1; protein SDA1 homolog K14856 SDA1; protein SDA1 D 128329238 FTSJ3; pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 128347399 PPAN; suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 128327850 TMA16; translation machinery-associated protein 16 isoform X1 K14860 TMA16; translation machinery-associated protein 16 D 128350317 URB1; nucleolar pre-ribosomal-associated protein 1 isoform X1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 128345800 URB2; unhealthy ribosome biogenesis protein 2 homolog isoform X1 K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D 128338429 WDR12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein D 128351325 NUFIP1; FMR1-interacting protein NUFIP1 isoform X1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 128336127 ZNHIT3; zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 128352342 BCCIP; BRCA2 and CDKN1A-interacting protein isoform X1 K15262 BCP1; protein BCP1 C 128327306 LYAR; cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein C 128323694 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 128336125 NSUN5; 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 128344087 TFB1M; dimethyladenosine transferase 1, mitochondrial isoform X1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 128336195 rRNA methyltransferase 1, mitochondrial-like K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 128336237 rRNA methyltransferase 1, mitochondrial-like isoform X1 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 128326138 BMT2; S-adenosylmethionine sensor upstream of mTORC1 isoform X1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 128336179 MRM3; rRNA methyltransferase 3, mitochondrial isoform X1 K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 128326106 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X1 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 128334446 DDX28; probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 128335846 DHX33; ATP-dependent RNA helicase DHX33 isoform X1 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6] C 128333020 IGHMBP2; DNA-binding protein SMUBP-2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 128335014 interferon-stimulated gene 20 kDa protein-like K12579 ISG20; interferon-stimulated gene 20 kDa protein [EC:3.1.13.1] C 128337407 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 isoform X1 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-] C 128336596 KDM8; bifunctional peptidase and arginyl-hydroxylase JMJD5 isoform X1 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 128335558 PHF6; PHD finger protein 6 K23310 PHF6; PHD finger protein 6 C 128336034 ERAL1; GTPase Era, mitochondrial isoform X1 K03595 era; GTPase C 128326716 NOPCHAP1; NOP protein chaperone 1 K26142 NOPCHAP1; NOP protein chaperone 1 C 128345326 PA2G4; proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein C 128348975 MTG1; mitochondrial ribosome-associated GTPase 1 isoform X1 K19828 MTG1; mitochondrial GTPase 1 C 128323942 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] C 128346411 NOA1; nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1 # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 128326852 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 128338809 RPL7A; 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 128335338 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 128331765 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D 128336634 MRM2; rRNA methyltransferase 2, mitochondrial isoform X1 K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C 128324988 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 128336034 ERAL1; GTPase Era, mitochondrial isoform X1 K03595 era; GTPase C 128323942 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C 128333301 YRDC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions D 128336276 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 128325488 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12 D 128325489 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12 D 128325490 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12 D 128334068 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13 D 128341327 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 128334066 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 128334070 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 128352672 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15 D 128352673 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15 D 128335760 small nucleolar RNA SNORD17 K26292 SNORD17; small nucleolar RNA SNORD17 D 128335226 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 128332183 small nucleolar RNA Z195/SNORD33/SNORD32 family K14881 SNORD32_33; small nucleolar RNA SNORD32/33 D 128339142 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 128339141 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 128325464 small nucleolar RNA SNORD38 K14887 SNORD38; small nucleolar RNA SNORD38 D 128336869 small nucleolar RNA SNORD60 K14875 SNORD60; small nucleolar RNA SNORD60 D 128348416 small nucleolar RNA SNORD104 K14904 SNORD104; small nucleolar RNA SNORD104 D 128332181 U8 small nucleolar RNA K27110 SNORD118; small nucleolar RNA SNORD118 C SnoRNAs act as guides for 2'-O-ribose methylation D 128348408 small nucleolar RNA R38 K14869 SNORD1; small nucleolar RNA SNORD1 D 128352713 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2 D 128336266 small nucleolar RNA Z17 K27197 SNORD4; small nucleolar RNA SNORD4 D 128352710 small nucleolar RNA SNORD5 K27198 SNORD5; small nucleolar RNA SNORD5 D 128352689 small nucleolar RNA Z40 K27199 SNORD6; small nucleolar RNA SNORD6 D 128341392 small nucleolar RNA SNORD11 K14896 SNORD11; small nucleolar RNA SNORD11 D 128341394 small nucleolar RNA SNORD11B K14896 SNORD11; small nucleolar RNA SNORD11 D 128348436 small nucleolar RNA SNORD19 K14934 SNORD19; small nucleolar RNA SNORD19 D 128337736 small nucleolar RNA SNORD29 K14895 SNORD29; small nucleolar RNA SNORD29 D 128337740 small nucleolar RNA SNORD31 K14893 SNORD31; small nucleolar RNA SNORD31 D 128325469 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45 D 128325468 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45 D 128336267 small nucleolar RNA SNORD49 K26304 SNORD49; small nucleolar RNA SNORD49 D 128341364 small nucleolar RNA SNORD51 K14885 SNORD51; small nucleolar RNA SNORD51 D 128341368 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92 D 128341369 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92 D 128325496 small nucleolar RNA U54 K26307 SNORD54; small nucleolar RNA SNORD54 D 128348403 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58 D 128348400 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58 D 128341359 small nucleolar RNA SNORD63 K27111 SNORD63; small nucleolar RNA SNORD63 D 128336274 small nucleolar RNA SNORD65 K14903 SNORD65; small nucleolar RNA SNORD65 D 128352705 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66 D 128352704 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66 D 128341386 small nucleolar RNA SNORD67 K27212 SNORD67; small nucleolar RNA SNORD67 D 128334637 small nucleolar RNA MBII-202 K27213 SNORD68; small nucleolar RNA SNORD68 D 128334638 small nucleolar RNA MBII-202 K27213 SNORD68; small nucleolar RNA SNORD68 D 128341387 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70 D 128348438 small nucleolar RNA SNORD72 K27181 SNORD72; small nucleolar RNA SNORD72 D 128328595 small nucleolar RNA SNORD73 K27208 SNORD73; small nucleolar RNA SNORD73 D 128325471 small nucleolar RNA SNORD74 K14890 SNORD74; small nucleolar RNA SNORD74 D 128325473 small nucleolar RNA snR60/Z15/Z230/Z193/J17 K14886 SNORD77_80; small nucleolar RNA SNORD77/80 D 128325491 small nucleolar RNA SNORD78 K26313 SNORD78; small nucleolar RNA SNORD78 D 128325461 small nucleolar RNA SNORD79 K26314 SNORD79; small nucleolar RNA SNORD79 D 128352679 small nucleolar RNA SNORD82 K27133 SNORD82; small nucleolar RNA SNORD82 D 128328613 small nucleolar RNA U83B K27134 SNORD83; small nucleolar RNA SNORD83 D 128325484 small nucleolar RNA SNORD87 K27177 SNORD87 U87; small nucleolar RNA SNORD87 D 128352706 small nucleolar RNA SNORD89 K27178 SNORD89; small nucleolar RNA SNORD89 D 128332202 small nucleolar RNA SNORD94 K27115 SNORD94; small nucleolar RNA SNORD94 D 128341395 small nucleolar RNA SNORD97 K27118 SNORD97; small nucleolar RNA SNORD97 D 128352707 small nucleolar RNA SNORD98 K27119 SNORD98; small nucleolar RNA SNORD98 D 128341389 small nucleolar RNA SNORD100 K27121 SNORD100; small nucleolar RNA SNORD100 D 128341360 small nucleolar RNA SNORD101 K27122 SNORD101; small nucleolar RNA SNORD101 D 128352680 small nucleolar RNA SNORD102 K27123 SNORD102; small nucleolar RNA SNORD102 D 128333423 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103 D 128333424 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103 D 128348445 small nucleolar RNA U105B K27125 SNORD105; small nucleolar RNA SNORD105 D 128334640 small nucleolar RNA SNORD111 K27130 SNORD111; small nucleolar RNA SNORD111 D 128335755 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117 D 128335756 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117 D 128348446 small nucleolar RNA SNORD121A K27137 SNORD121; small nucleolar RNA SNORD121 D 128338277 small nucleolar RNA SNORD125 K27140 SNORD125; small nucleolar RNA SNORD125 D 128332203 small nucleolar RNA SNORD126 K27141 SNORD126; small nucleolar RNA SNORD126 D 128341393 small nucleolar RNA SNORD127 K27142 SNORD127; small nucleolar RNA SNORD127 B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions D 128325478 small nucleolar RNA SNORA5 K14923 SNORA5; small nucleolar RNA SNORA5 D 128334639 small nucleolar RNA SNORA50 K14928 SNORA50_76; small nucleolar RNA SNORA50/76 D 128328610 small nucleolar RNA SNORA53 K14929 SNORA53; small nucleolar RNA SNORA53 D 128338276 small nucleolar RNA SNORA77 K14935 SNORA77; small nucleolar RNA SNORA77 C SnoRNAs act as guides for pseudouridynation D 128352692 small nucleolar RNA SNORA1 K14918 SNORA1; small nucleolar RNA SNORA1 D 128348430 small nucleolar RNA SNORA2/SNORA34 family K14922 SNORA2_34; small nucleolar RNA SNORA2/34 D 128332245 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62 D 128332180 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62 D 128348429 small nucleolar RNA SNORA7 K26322 SNORA7; small nucleolar RNA SNORA7 D 128341378 small nucleolar RNA SNORA14 K14916 SNORA14; small nucleolar RNA SNORA14 D 128339134 small nucleolar RNA SNORA17 K26326 SNORA17_43; small nucleolar RNA SNORA17/43 D 128352696 small nucleolar RNA SNORA18 K26327 SNORA18; small nucleolar RNA SNORA18 D 128352694 small nucleolar RNA SNORA19 K26328 SNORA19; small nucleolar RNA SNORA19 D 128332194 small nucleolar RNA SNORA21 K14909 SNORA21; small nucleolar RNA SNORA21 D 128341367 small nucleolar RNA SNORA23 K26330 SNORA23; small nucleolar RNA SNORA23 D 128352688 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31 D 128348448 small nucleolar RNA SNORA47 K27149 SNORA47; small nucleolar RNA SNORA47 D 128352702 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48 D 128332196 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48 D 128333429 small nucleolar RNA SNORA55 K27150 SNORA55; small nucleolar RNA SNORA55 D 128325460 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72 D 128348447 small nucleolar RNA SNORA84 K27151 SNORA84; small nucleolar RNA SNORA84 B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024