+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Hippocampus comes (tiger tail seahorse)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        109508358 polr2a; DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        109508323 polr2b; DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        109513074 polr2c; DNA-directed RNA polymerase II subunit RPB3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        109522404 polr2j; DNA-directed RNA polymerase II subunit RPB11-a isoform X1	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        109514618 polr2d; DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        109524391 polr2g; DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        109512866 polr2i; DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        109525953 polr2m; protein GRINL1A	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        109522892 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109532430 polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109516402 polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109519125 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109518943 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109512022 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        109514356 polr2l; DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        109516167 gtf2a1l; TFIIA-alpha and beta-like factor isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        109508165 gtf2a1; transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        109529806 gtf2a2; transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        109520506 gtf2b; transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        109520867 TATA box-binding protein-like protein 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109531554 tbp; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109524923 tbpl1; TATA box-binding protein-like protein 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109518611 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109512496 transcription initiation factor TFIID subunit 1-like isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        109521927 taf2; transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        109522931 taf3; transcription initiation factor TFIID subunit 3	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        109524483 transcription initiation factor TFIID subunit 4B-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109518249 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109509866 taf4; transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109513977 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109512621 taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109527276 taf5; transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109512426 taf6; transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109508534 taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109511949 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        109513033 taf8; transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        109517330 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        109514735 taf10; transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109528397 taf11; transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        109522773 taf12; transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        109513810 taf13; transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        109523325 gtf2e1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        109511355 gtf2e2; transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        109527031 gtf2f1; general transcription factor IIF subunit 1 isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        109523329 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        109524608 gtf2f2; general transcription factor IIF subunit 2 isoform X1	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        109507513 gtf2h1; general transcription factor IIH subunit 1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        109506821 general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        109514188 gtf2h3; general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        109528051 gtf2h4; general transcription factor IIH subunit 4	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        109530149 ercc3; TFIIH basal transcription factor complex helicase XPB subunit	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        109529405 ercc2; TFIIH basal transcription factor complex helicase XPD subunit isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        109530988 gtf2h5; general transcription factor IIH subunit 5 isoform X1	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        109514144 cdk7; cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        109515987 mnat1; CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        109520681 ccnh; cyclin-H	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        109517257 med6; mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        109516945 med8; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        109516572 med11; mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        109510830 med17; mediator of RNA polymerase II transcription subunit 17 isoform X1	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        109522791 med18; mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        109524240 med19; mediator of RNA polymerase II transcription subunit 19 isoform X1	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        109522292 mediator of RNA polymerase II transcription subunit 20-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        109522293 mediator of RNA polymerase II transcription subunit 20-like isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        109510527 med22; mediator of RNA polymerase II transcription subunit 22 isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        109511159 med28; mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        109526375 med29; mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        109518057 mediator of RNA polymerase II transcription subunit 30-like isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
E        109516369 med30; mediator of RNA polymerase II transcription subunit 30 isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        109513383 med1; mediator of RNA polymerase II transcription subunit 1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        109524705 mediator of RNA polymerase II transcription subunit 1-like isoform X1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        109509803 mediator of RNA polymerase II transcription subunit 4	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        109517033 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        109524355 med7; mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        109517722 med9; mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        109519221 med10; mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        109528856 med21; mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        109517363 med31; mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        109510181 med14; mediator of RNA polymerase II transcription subunit 14 isoform X1	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        109513764 med15; mediator of RNA polymerase II transcription subunit 15	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        109506843 med16; mediator of RNA polymerase II transcription subunit 16 isoform X1	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        109524847 cdk19; cyclin-dependent kinase 19 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        109514052 cdk8; cyclin-dependent kinase 8	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        109528044 ccnc; cyclin-C	K15161 CCNC; cyclin-C 
E        109515895 med12; mediator of RNA polymerase II transcription subunit 12 isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        109520393 med13l; mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        109518466 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        109531148 med13; mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        109509408 med23; mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        109521553 med24; mediator of RNA polymerase II transcription subunit 24 isoform X1	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        109527822 med25; mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        109520601 med26; mediator of RNA polymerase II transcription subunit 26 isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        109525252 med27; mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        109532223 kat2a; histone acetyltransferase KAT2A	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        109531601 histone acetyltransferase KAT2B-like isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        109507687 trrap; transformation/transcription domain-associated protein isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        109510192 supt3h; LOW QUALITY PROTEIN: transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        109510897 tada2a; transcriptional adapter 2-alpha isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        109522823 tada2b; transcriptional adapter 2-beta	K15127 TADA2B; transcriptional adapter 2-beta 
E        109509860 tada3; transcriptional adapter 3	K11315 TADA3; transcriptional adapter 3 
E        109521334 tada1; transcriptional adapter 1	K11317 TADA1; transcriptional adapter 1 
E        109521927 taf2; transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        109524483 transcription initiation factor TFIID subunit 4B-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109518249 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109509866 taf4; transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109513977 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109512621 taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109527276 taf5; transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109512426 taf6; transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109508534 taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109511949 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        109517330 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        109514735 taf10; transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109522773 taf12; transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        109532056 atxn7l3; ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        109523935 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        109513745 sgf29; SAGA-associated factor 29	K11364 SGF29; SAGA-associated factor 29 
E        109519535 supt7l; STAGA complex 65 subunit gamma isoform X1	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        109513583 LOW QUALITY PROTEIN: ataxin-7-like protein 1	K11318 ATXN7; ataxin-7 
E        109514507 atxn7l2; ataxin-7-like protein 2 isoform X1	K11318 ATXN7; ataxin-7 
E        109522607 atxn7; ataxin-7 isoform X1	K11318 ATXN7; ataxin-7 
E        109530678 chd1; chromodomain-helicase-DNA-binding protein 1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        109518357 eny2; transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        109512028 ubiquitin carboxyl-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        109517742 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        109526809 sf3b3; splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        109508408 smarca4; transcription activator BRG1 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        109511342 transcription activator BRG1-like isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        109515611 smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109530844 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109513544 SWI/SNF complex subunit SMARCC1-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109512212 smarcc1; SWI/SNF complex subunit SMARCC1 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109522509 smarcc2; SWI/SNF complex subunit SMARCC2	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109521820 smarcd3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109508255 smarcd1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109523933 smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109521717 smarce1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        109520242 actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        109511281 actin, cytoplasmic 2	K05692 ACTB_G1; actin beta/gamma 1 
E        109522069 actl6a; actin-like protein 6A	K11340 ACTL6A; actin-like protein 6A 
E        109516010 AT-rich interactive domain-containing protein 1B-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109514548 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109525651 AT-rich interactive domain-containing protein 1A-like isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109528867 arid2; AT-rich interactive domain-containing protein 2	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        109522349 protein polybromo-1-like isoform X1	K11757 PBRM1; protein polybromo-1 
E        109531451 protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        109515611 smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109530844 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        109510573 sub1; activated RNA polymerase II transcriptional coactivator p15	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        109509913 ccar1; cell division cycle and apoptosis regulator protein 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        109531345 calcium-binding and coiled-coil domain-containing protein 1-like	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        109520557 tcea1; transcription elongation factor A protein 1 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        109528246 transcription elongation factor A protein 2-like isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        109525691 serine/arginine repetitive matrix protein 1-like isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        109531132 supt4h1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109514672 supt5h; transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        109532043 supt6h; transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        109522366 ttf2; transcription termination factor 2 isoform X1	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        109512397 pcf11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        109508270 cpsf1; cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        109526156 cpsf3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        109531721 cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        109527044 cpsf4; cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        109525062 ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109508421 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109527761 serine/threonine-protein phosphatase alpha-2 isoform-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109517394 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109526199 serine/threonine-protein phosphatase alpha-2 isoform-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109515310 sympk; symplekin	K06100 SYMPK; symplekin 
E        109522392 ssu72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        109516769 xrn2; 5'-3' exoribonuclease 2 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        109516664 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        109515142 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        109515002 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        109514731 rprd1b; regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        109531617 regulation of nuclear pre-mRNA domain-containing protein 1A-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        109516351 non-POU domain-containing octamer-binding protein-like isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        109526090 scaf8; protein SCAF8	K13191 RBM16; RNA-binding protein 16 
E        109509754 splicing factor, arginine/serine-rich 15-like isoform X1	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        109530783 splicing factor, arginine/serine-rich 15-like	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        109511306 pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        109518512 paf1; RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        109521338 cdc73; parafibromin	K15175 CDC73; parafibromin 
E        109525990 ctr9; RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        109525746 leo1; RNA polymerase-associated protein LEO1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        109517300 rtf1; RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        109508393 nelfa; LOW QUALITY PROTEIN: negative elongation factor A	K15179 WHSC2; negative elongation factor A 
E        109510587 nelfb; negative elongation factor B	K15180 COBRA1; negative elongation factor B 
E        109522376 nelfcd; negative elongation factor C/D	K15181 TH1L; negative elongation factor C/D 
E        109516363 nelfe; negative elongation factor E isoform X1	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        109532120 ell; RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109517237 RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109522378 ell2; RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109513945 RNA polymerase II elongation factor ELL2-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109525171 AF4/FMR2 family member 1-like isoform X1	K15184 AFF1; AF4/FMR2 family member 1 
E        109517861 aff4; AF4/FMR2 family member 4 isoform X1	K15185 AFF4; AF4/FMR2 family member 4 
E        109512199 eaf1; ELL-associated factor 1	K15186 EAF; ELL-associated factor 
E        109519162 ELL-associated factor 2-like	K15186 EAF; ELL-associated factor 
E        109508469 mllt3; protein AF-9 isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        109519101 mllt1; protein ENL isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        109512302 ccnt2; cyclin-T2	K15188 CCNT; cyclin T 
E        109515027 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109523053 ccnt1; cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        109529116 cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        109532120 ell; RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109517237 RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109522378 ell2; RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109513945 RNA polymerase II elongation factor ELL2-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109521939 ice1; little elongation complex subunit 1	K26143 ICE1; little elongation complex subunit 1 
E        109519439 ice2; little elongation complex subunit 2	K26144 ICE2; little elongation complex subunit 2 
D      Brd4/P-TEFb complex
E        109511030 bromodomain-containing protein 4-like isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        109507480 bromodomain-containing protein 4-like isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        109512302 ccnt2; cyclin-T2	K15188 CCNT; cyclin T 
E        109515027 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109523053 ccnt1; cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        109529116 cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        109532157 protein HEXIM-like isoform X1	K15189 HEXIM1_2; protein HEXIM1/2 
E        109518232 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        109517829 7SK snRNA methylphosphate capping enzyme-like isoform X1	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        109507046 larp7; la-related protein 7 isoform X1	K15191 LARP7; La-related protein 7 
E        109512302 ccnt2; cyclin-T2	K15188 CCNT; cyclin T 
E        109515027 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109523053 ccnt1; cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        109529116 cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        109517927 gtf2ird1; general transcription factor II-I repeat domain-containing protein 1 isoform X1	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        109523079 btaf1; TATA-binding protein-associated factor 172	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        109516927 dr1; protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        109508423 drap1; dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        109520334 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        109520344 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        109530402 spty2d1; protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        109524327 aff2; AF4/FMR2 family member 2	K15194 AFF2; AF4/FMR2 family member 2 
E        109530671 aff3; AF4/FMR2 family member 3 isoform X1	K15195 AFF3; AF4/FMR2 family member 3 
E        109508271 ctdp1; RNA polymerase II subunit A C-terminal domain phosphatase	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        109512783 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109527878 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109507258 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109517554 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109509538 protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        109518470 iws1; protein IWS1 homolog isoform X1	K17498 SPN1; transcription factor SPN1 
E        109519492 cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109527131 csrnp3; cysteine/serine-rich nuclear protein 3 isoform X1	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109512805 LOW QUALITY PROTEIN: cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109514003 csrnp2; cysteine/serine-rich nuclear protein 2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109526142 rpap1; RNA polymerase II-associated protein 1 isoform X1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        109520544 rpap2; putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        109531839 rpap3; RNA polymerase II-associated protein 3 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        109523474 ccnk; cyclin-K	K23326 CCNK; cyclin K 
E        109525653 gpn2; GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        109523426 gpn3; GPN-loop GTPase 3 isoform X1	K24104 GPN; GPN-loop GTPase 
E        109529805 gpn1; GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        109518578 polr3a; DNA-directed RNA polymerase III subunit RPC1 isoform X1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        109531356 polr3b; DNA-directed RNA polymerase III subunit RPC2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        109517139 polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        109524366 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        109522797 polr3c; DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        109524933 polr3d; DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        109529285 DNA-directed RNA polymerase III subunit RPC4-like isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        109527546 polr3e; DNA-directed RNA polymerase III subunit RPC5 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        109527635 polr3f; DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        109530701 polr3g; DNA-directed RNA polymerase III subunit RPC7	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        109512163 polr3gl; DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        109516406 polr3h; DNA-directed RNA polymerase III subunit RPC8 isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        109532040 crcp; DNA-directed RNA polymerase III subunit RPC9	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        109513820 polr3k; DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        109522892 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109532430 polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109516402 polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109519125 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109518943 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109512022 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        109514356 polr2l; DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        109514055 gtf3a; transcription factor IIIA isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        109532394 P43 5S RNA-binding protein-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        109511057 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
E        109525318 gastrula zinc finger protein XlCGF7.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109524506 gastrula zinc finger protein XlCGF17.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109524517 gastrula zinc finger protein XlCGF49.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109524598 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109524605 gastrula zinc finger protein XlCGF7.1-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        109525811 gastrula zinc finger protein XlCGF42.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109529523 oocyte zinc finger protein XlCOF19-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        109520867 TATA box-binding protein-like protein 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109531554 tbp; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109524923 tbpl1; TATA box-binding protein-like protein 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109518611 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109520965 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        109524825 transcription factor IIIB 90 kDa subunit-like isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        109523588 brf2; transcription factor IIIB 50 kDa subunit	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
E        109530118 bdp1; transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        109511246 gtf3c1; general transcription factor 3C polypeptide 1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        109523477 gtf3c2; general transcription factor 3C polypeptide 2 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        109507789 gtf3c3; general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        109530892 gtf3c4; general transcription factor 3C polypeptide 4 isoform X1	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        109530885 gtf3c5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        109531285 gtf3c6; general transcription factor 3C polypeptide 6 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        109530885 gtf3c5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        109507789 gtf3c3; general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        109522825 snRNA-activating protein complex subunit 1-like	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        109521277 snapc1; snRNA-activating protein complex subunit 1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        109516533 snapc2; snRNA-activating protein complex subunit 2 isoform X1	K15209 SNAPC2; snRNA-activating protein complex subunit 2 
E        109511250 snapc3; snRNA-activating protein complex subunit 3	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        109519271 snapc4; snRNA-activating protein complex subunit 4	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
E        109519421 snapc5; snRNA-activating protein complex subunit 5	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
D      Octamer transcription factors
E        109518391 POU domain, class 2, transcription factor 2-like isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        109531701 pou2f2; POU domain, class 2, transcription factor 2 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        109530620 pou2f1; POU domain, class 2, transcription factor 1 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        109509722 pou2f3; POU domain, class 2, transcription factor 3 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        109527971 POU domain, class 5, transcription factor 1-like	K09367 POU5F; POU domain transcription factor, class 5 
D      Others
E        109530902 znf143; zinc finger protein 143 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        109513684 maf1; repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        109515771 polr1a; DNA-directed RNA polymerase I subunit RPA1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        109524758 polr1b; DNA-directed RNA polymerase I subunit RPA2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        109517139 polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        109524366 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        109519802 polr1e; DNA-directed RNA polymerase I subunit RPA49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        109513636 twistnb; DNA-directed RNA polymerase I subunit RPA43	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        109510890 cd3eap; DNA-directed RNA polymerase I subunit RPA34 isoform X1	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        109527978 znrd1; DNA-directed RNA polymerase I subunit RPA12 isoform X1	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        109522892 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109532430 polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109516402 polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109519125 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109518943 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109512022 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        109514356 polr2l; DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        109520867 TATA box-binding protein-like protein 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109531554 tbp; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109524923 tbpl1; TATA box-binding protein-like protein 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109518611 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109508018 taf1a; TATA box-binding protein-associated factor RNA polymerase I subunit A	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        109531723 taf1b; TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        109527063 taf1c; LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit C	K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C 
C    Other transcription-related factors
D      UBF
E        109532189 ubtf; nucleolar transcription factor 1 isoform X1	K09273 UBTF; upstream-binding transcription factor 
E        109518862 nucleolar transcription factor 1-B-like isoform X1	K09273 UBTF; upstream-binding transcription factor 
E        109523868 upstream-binding factor 1-like protein 1 isoform X1	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        109529121 rrn3; RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        109531132 supt4h1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109514672 supt5h; transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        109511378 smarca5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        109528535 baz2a; bromodomain adjacent to zinc finger domain protein 2A isoform X1	K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A 
D      CTDK-I complex
D      Transcription termination factors
E        109525267 ttf1; transcription termination factor 1	K15225 TTF1; transcription termination factor 1 
E        109513807 polymerase I and transcript release factor-like	K19387 PTRF; polymerase I and transcript release factor 
E        109529302 polymerase I and transcript release factor-like	K19387 PTRF; polymerase I and transcript release factor 
D      Others
E        109516125 nucleolar and coiled-body phosphoprotein 1-like isoform X1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        109520506 gtf2b; transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        109523325 gtf2e1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#<hr>
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#Last updated: April 9, 2024