+D GENES KO
#
KEGG Orthology (KO) - Candidatus Hodgkinia cicadicola TETULN
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis
C 00020 Citrate cycle (TCA cycle)
C 00030 Pentose phosphate pathway
D HCTETULN_092 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
C 00040 Pentose and glucuronate interconversions
C 00051 Fructose and mannose metabolism
C 00052 Galactose metabolism
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism
C 00520 Amino sugar and nucleotide sugar metabolism
C 00620 Pyruvate metabolism
C 00630 Glyoxylate and dicarboxylate metabolism
C 00640 Propanoate metabolism
C 00650 Butanoate metabolism
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hct00190]
D HCTETULN_173 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HCTETULN_174 fbcH; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HCTETULN_175 petC; Cytochrome c1 precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HCTETULN_186 ctaD; Cytochrome c oxidase subunit 1-beta K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D HCTETULN_187 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D HCTETULN_185 ctaG; Cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D HCTETULN_125 cycM; Cytochrome c552 K08738 CYC; cytochrome c
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle
C 00720 Other carbon fixation pathways
D HCTETULN_030 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00680 Methane metabolism
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism [PATH:hct00920]
D HCTETULN_164 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D HCTETULN_119 cysI; putative sulfite reductase hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D HCTETULN_147 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HCTETULN_113 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism
C 00564 Glycerophospholipid metabolism
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism
D HCTETULN_092 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
C 00240 Pyrimidine metabolism
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism
C 00260 Glycine, serine and threonine metabolism
C 00270 Cysteine and methionine metabolism [PATH:hct00270]
D HCTETULN_147 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HCTETULN_113 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HCTETULN_145 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HCTETULN_167 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 00280 Valine, leucine and isoleucine degradation
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis
C 00310 Lysine degradation
C 00220 Arginine biosynthesis
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism [PATH:hct00340]
D HCTETULN_142 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HCTETULN_050 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D HCTETULN_028 hisI; phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D HCTETULN_026 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D HCTETULN_025 hisH; Imidazole glycerol phosphate synthase subunit HisH 1 K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HCTETULN_027 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HCTETULN_024 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D HCTETULN_159 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HCTETULN_100 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism
D HCTETULN_159 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism
D HCTETULN_159 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hct00400]
D HCTETULN_159 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:hct00450]
D HCTETULN_145 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HCTETULN_167 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HCTETULN_038 sufS; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HCTETULN_188 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HCTETULN_158 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hct00543]
D HCTETULN_147 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism
C 00740 Riboflavin metabolism [PATH:hct00740]
D HCTETULN_138 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HCTETULN_139 ribC; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism
C 00770 Pantothenate and CoA biosynthesis
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:hct00790]
D HCTETULN_049 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
C 00670 One carbon pool by folate [PATH:hct00670]
D HCTETULN_167 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HCTETULN_030 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hct00860]
D HCTETULN_051 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HCTETULN_013 cobA; putative uroporphyrin-III c-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HCTETULN_005 cbiX; Sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D HCTETULN_009 cobJ; precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D HCTETULN_010 cobM; Cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D HCTETULN_006 cobH; Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D HCTETULN_003 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D HCTETULN_047 pcobS; Aerobic cobaltochelatase subunit pCobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D HCTETULN_046 cobT; Aerobic cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D HCTETULN_004 cobO; putative cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HCTETULN_001 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HCTETULN_015 cobD; cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HCTETULN_002 cobP; Adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HCTETULN_179 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
D HCTETULN_159 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hct03020]
D HCTETULN_063 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HCTETULN_064 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HCTETULN_089 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hct03010]
D HCTETULN_153 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HCTETULN_155 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HCTETULN_075 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HCTETULN_183 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HCTETULN_085 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HCTETULN_066 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HCTETULN_082 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HCTETULN_022 rpsI; putative 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HCTETULN_069 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HCTETULN_088 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HCTETULN_065 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HCTETULN_087 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HCTETULN_081 rpsN; putative 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HCTETULN_109 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HCTETULN_077 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HCTETULN_163 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HCTETULN_073 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HCTETULN_072 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HCTETULN_070 rplC; putative 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HCTETULN_071 rplD; putative 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HCTETULN_080 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HCTETULN_083 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HCTETULN_062 rplL; putative 50S ribosomal subunit L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HCTETULN_060 rplK; putative 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HCTETULN_021 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HCTETULN_078 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HCTETULN_086 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HCTETULN_076 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HCTETULN_090 rplQ; putative 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HCTETULN_110 rplS; putative 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HCTETULN_170 rplT; putative 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HCTETULN_091 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D HCTETULN_133 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HCTETULN_160 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HCTETULN_191 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HCTETULN_052 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HCTETULN_169 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HCTETULN_192 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HCTETULN_129 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HCTETULN_131 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HCTETULN_132 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hct00970]
D HCTETULN_130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HCTETULN_106 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HCTETULN_040 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HCTETULN_165 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HCTETULN_144 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HCTETULN_058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HCTETULN_111 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HCTETULN_193 tRNA-His K14226 tRNA-His; tRNA His
D HCTETULN_166 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HCTETULN_117 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HCTETULN_093 tRNA-Met K14230 tRNA-Met; tRNA Met
D HCTETULN_095 tRNA-Met K14230 tRNA-Met; tRNA Met
D HCTETULN_134 tRNA-Met K14230 tRNA-Met; tRNA Met
D HCTETULN_102 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HCTETULN_146 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HCTETULN_057 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HCTETULN_099 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HCTETULN_105 tRNA-Val K14237 tRNA-Val; tRNA Val
D HCTETULN_059 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D HCTETULN_051 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HCTETULN_055 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HCTETULN_056 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HCTETULN_182 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HCTETULN_148 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HCTETULN_158 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HCTETULN_041 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HCTETULN_150 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HCTETULN_104 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HCTETULN_140 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HCTETULN_171 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HCTETULN_115 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D HCTETULN_094 mnmA; putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:hct03018]
D HCTETULN_122 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D HCTETULN_152 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hct03030]
D HCTETULN_018 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HCTETULN_103 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
C 03410 Base excision repair
C 03420 Nucleotide excision repair
C 03430 Mismatch repair
D HCTETULN_103 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HCTETULN_018 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03440 Homologous recombination
D HCTETULN_103 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HCTETULN_018 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hct02020]
D HCTETULN_173 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HCTETULN_174 fbcH; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HCTETULN_175 petC; Cytochrome c1 precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HCTETULN_125 cycM; Cytochrome c552 K08738 CYC; cytochrome c
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D HCTETULN_173 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing
D HCTETULN_138 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D HCTETULN_017 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D HCTETULN_167 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hct01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins
C 01002 Peptidases and inhibitors [BR:hct01002]
D HCTETULN_178 clpP; ATP-dependent Clp protease proteolytic subunit precursor K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases
C 01007 Amino acid related enzymes [BR:hct01007]
D HCTETULN_051 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HCTETULN_115 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HCTETULN_158 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HCTETULN_150 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HCTETULN_041 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HCTETULN_140 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HCTETULN_148 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HCTETULN_104 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HCTETULN_182 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HCTETULN_171 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HCTETULN_159 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors
C 03021 Transcription machinery [BR:hct03021]
D HCTETULN_089 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HCTETULN_063 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HCTETULN_064 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HCTETULN_017 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D HCTETULN_189 greA; Transcript cleavage factor greA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:hct03019]
D HCTETULN_122 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D HCTETULN_152 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
C 03041 Spliceosome
C 03011 Ribosome [BR:hct03011]
D HCTETULN_153 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HCTETULN_155 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HCTETULN_075 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HCTETULN_183 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HCTETULN_085 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HCTETULN_066 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HCTETULN_082 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HCTETULN_022 rpsI; putative 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HCTETULN_069 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HCTETULN_088 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HCTETULN_065 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HCTETULN_087 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HCTETULN_081 rpsN; putative 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HCTETULN_109 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HCTETULN_077 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HCTETULN_163 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HCTETULN_073 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HCTETULN_072 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HCTETULN_070 rplC; putative 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HCTETULN_071 rplD; putative 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HCTETULN_080 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HCTETULN_083 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HCTETULN_060 rplK; putative 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HCTETULN_062 rplL; putative 50S ribosomal subunit L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HCTETULN_021 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HCTETULN_078 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HCTETULN_086 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HCTETULN_076 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HCTETULN_090 rplQ; putative 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HCTETULN_110 rplS; putative 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HCTETULN_170 rplT; putative 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HCTETULN_133 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HCTETULN_160 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HCTETULN_191 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HCTETULN_052 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HCTETULN_169 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HCTETULN_192 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HCTETULN_091 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D HCTETULN_132 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HCTETULN_129 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HCTETULN_131 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hct03009]
D HCTETULN_161 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HCTETULN_032 16S rRNA m(4) methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HCTETULN_154 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HCTETULN_039 putative RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HCTETULN_042 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HCTETULN_053 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C 03016 Transfer RNA biogenesis [BR:hct03016]
D HCTETULN_051 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HCTETULN_104 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HCTETULN_150 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HCTETULN_158 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HCTETULN_182 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HCTETULN_041 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HCTETULN_140 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HCTETULN_171 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HCTETULN_115 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HCTETULN_020 trmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HCTETULN_019 gidA; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HCTETULN_148 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HCTETULN_094 mnmA; putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HCTETULN_045 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
C 03012 Translation factors [BR:hct03012]
D HCTETULN_124 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HCTETULN_168 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HCTETULN_068 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D HCTETULN_067 fusA; Elongation factor G K02355 fusA; elongation factor G
D HCTETULN_096 prfA; putative peptide chain release factor RF1 K02835 prfA; peptide chain release factor 1
D HCTETULN_157 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HCTETULN_101 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
C 03110 Chaperones and folding catalysts [BR:hct03110]
D HCTETULN_122 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D HCTETULN_152 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HCTETULN_121 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HCTETULN_151 groS; co-chaperonin GroES K04078 groES; chaperonin GroES
D HCTETULN_029 hypothetical protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:hct03032]
D HCTETULN_103 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HCTETULN_018 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03036 Chromosome and associated proteins [BR:hct03036]
D HCTETULN_019 gidA; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
C 03400 DNA repair and recombination proteins [BR:hct03400]
D HCTETULN_063 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HCTETULN_064 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HCTETULN_089 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HCTETULN_103 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HCTETULN_018 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03029 Mitochondrial biogenesis [BR:hct03029]
D HCTETULN_174 fbcH; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HCTETULN_124 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HCTETULN_168 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HCTETULN_068 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D HCTETULN_067 fusA; Elongation factor G K02355 fusA; elongation factor G
D HCTETULN_055 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HCTETULN_056 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HCTETULN_122 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D HCTETULN_152 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HCTETULN_151 groS; co-chaperonin GroES K04078 groES; chaperonin GroES
D HCTETULN_121 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HCTETULN_185 ctaG; Cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hct02000]
D HCTETULN_036 sufC; putative ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
C 02044 Secretion system
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins
C 04147 Exosome [BR:hct04147]
D HCTETULN_152 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HCTETULN_122 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D HCTETULN_068 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D HCTETULN_127 etfA; Electron transfer flavoprotein large subunit K03522 fixB; electron transfer flavoprotein alpha subunit
C 02048 Prokaryotic defense system [BR:hct02048]
D HCTETULN_051 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hct03100]
D HCTETULN_130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HCTETULN_106 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HCTETULN_040 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HCTETULN_165 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HCTETULN_144 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HCTETULN_058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HCTETULN_111 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HCTETULN_193 tRNA-His K14226 tRNA-His; tRNA His
D HCTETULN_166 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HCTETULN_117 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HCTETULN_093 tRNA-Met K14230 tRNA-Met; tRNA Met
D HCTETULN_095 tRNA-Met K14230 tRNA-Met; tRNA Met
D HCTETULN_134 tRNA-Met K14230 tRNA-Met; tRNA Met
D HCTETULN_102 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HCTETULN_146 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HCTETULN_057 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HCTETULN_099 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HCTETULN_105 tRNA-Val K14237 tRNA-Val; tRNA Val
D HCTETULN_059 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D HCTETULN_129 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HCTETULN_131 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HCTETULN_132 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HCTETULN_048 etfD; Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D HCTETULN_118 fpr; Ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HCTETULN_112 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HCTETULN_016 fdxA; Ferredoxin II K05524 fdxA; ferredoxin
D HCTETULN_126 etfB; Electron transfer flavoprotein small subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
C 99976 Replication and repair
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HCTETULN_035 sufB; FeS cluster assembly protein sufB K09014 sufB; Fe-S cluster assembly protein SufB
C 99997 Function unknown
D HCTETULN_034 hypothetical protein K07018 K07018; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024