+D GENES KO
#
KEGG Orthology (KO) - Hyphomicrobium denitrificans ATCC 51888
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hdn00010]
D Hden_2602 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Hden_3131 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Hden_1524 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_1448 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Hden_2446 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Hden_1623 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Hden_3325 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Hden_1768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Hden_2644 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Hden_2002 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Hden_0894 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Hden_0786 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Hden_0895 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_2510 Alcohol dehydrogenase zinc-binding domain protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D Hden_1323 PQQ-dependent dehydrogenase, methanol/ethanol family K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D Hden_1320 methanol dehydrogenase beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D Hden_0340 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_0796 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_0783 PQQ-dependent enzyme-like protein K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_2315 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Hden_3455 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1655 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Hden_1360 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Hden_2298 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:hdn00020]
D Hden_1904 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Hden_0810 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Hden_3253 aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Hden_2121 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Hden_3227 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Hden_3226 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3228 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Hden_3229 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Hden_3238 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Hden_3236 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Hden_3240 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Hden_3239 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Hden_0262 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Hden_3231 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Hden_2298 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Hden_0894 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Hden_0786 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Hden_0895 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hdn00030]
D Hden_2602 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Hden_3129 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Hden_1622 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Hden_3221 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Hden_1847 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Hden_1359 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Hden_2508 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Hden_2642 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_3131 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Hden_1524 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:hdn00040]
D Hden_3055 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Hden_2657 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Hden_3129 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Hden_2519 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:hdn00051]
D Hden_0277 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Hden_0101 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Hden_0100 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Hden_2519 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Hden_3131 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Hden_1524 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_1448 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Hden_2302 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:hdn00052]
D Hden_0092 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Hden_2657 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism [PATH:hdn00053]
D Hden_3055 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Hden_3127 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:hdn00500]
D Hden_2657 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Hden_1361 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Hden_1358 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Hden_2602 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hdn00520]
D Hden_0221 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Hden_0518 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Hden_2287 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Hden_1649 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Hden_2410 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Hden_1648 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Hden_2361 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Hden_2307 protein of unknown function UPF0079 K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Hden_2308 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Hden_2715 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Hden_0245 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Hden_0185 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Hden_1360 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Hden_2657 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Hden_3055 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Hden_0092 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Hden_3127 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Hden_2302 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Hden_2602 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Hden_0277 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Hden_0101 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Hden_0100 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:hdn00620]
D Hden_3455 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1655 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_0894 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Hden_0786 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Hden_0895 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_2510 Alcohol dehydrogenase zinc-binding domain protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D Hden_1323 PQQ-dependent dehydrogenase, methanol/ethanol family K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D Hden_1320 methanol dehydrogenase beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D Hden_0340 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_0796 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_0783 PQQ-dependent enzyme-like protein K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_2029 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2028 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2053 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2644 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Hden_3176 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Hden_0838 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Hden_0837 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Hden_2317 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Hden_2315 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Hden_2747 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D Hden_1832 FMN-dependent alpha-hydroxy acid dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D Hden_3362 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Hden_2767 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Hden_2483 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Hden_3231 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Hden_0262 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Hden_3150 putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Hden_2298 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Hden_2002 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2072 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Hden_1397 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hdn00630]
D Hden_2058 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D Hden_3455 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1655 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_3231 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Hden_1904 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Hden_0810 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Hden_3253 aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Hden_3151 succinyl-CoA synthetase, alpha subunit K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D Hden_3152 succinyl-CoA synthetase, beta subunit K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2770 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Hden_2610 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Hden_0216 crotonyl-CoA reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D Hden_1926 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Hden_0218 methylmalonyl-CoA mutase, large subunit K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D Hden_0214 acyl-CoA dehydrogenase domain protein K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D Hden_3241 MaoC domain protein dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D Hden_1659 HpcH/HpaI aldolase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_3153 Citryl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_2237 Carbamoyl-phosphate synthase L chain ATP-binding protein K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Hden_1501 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Hden_2554 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_2560 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_2581 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Hden_2580 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Hden_2579 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Hden_2518 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Hden_2617 Catalase related subgroup K03781 katE; catalase [EC:1.11.1.6]
D Hden_0525 Catalase related subgroup K03781 katE; catalase [EC:1.11.1.6]
D Hden_3510 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Hden_1848 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Hden_1497 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Hden_0290 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_3154 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_0775 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1424 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0975 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_2221 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0515 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0960 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Hden_2792 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Hden_2794 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0085 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0539 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_1299 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Hden_0696 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Hden_2793 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Hden_2671 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Hden_2642 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Hden_0607 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D Hden_2468 hypothetical protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D Hden_2466 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Hden_0527 Soluble ligand binding domain protein K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D Hden_2465 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Hden_2464 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:hdn00640]
D Hden_3455 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1655 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_2747 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D Hden_2029 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2028 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2053 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_3176 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Hden_0838 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Hden_0837 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Hden_2317 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Hden_1645 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D Hden_0972 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Hden_0971 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Hden_2237 Carbamoyl-phosphate synthase L chain ATP-binding protein K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Hden_1501 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Hden_1926 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Hden_2554 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_2560 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_3229 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Hden_3228 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Hden_0810 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
C 00650 Butanoate metabolism [PATH:hdn00650]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_3415 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_2610 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Hden_2054 Poly-beta-hydroxybutyrate polymerase domain protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Hden_1521 poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Hden_0361 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D Hden_2770 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Hden_3238 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Hden_3236 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Hden_3240 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Hden_3239 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Hden_0972 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Hden_0973 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Hden_0803 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Hden_0804 Acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D Hden_0096 Alcohol dehydrogenase GroES domain protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Hden_2080 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Hden_2077 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:hdn00660]
D Hden_2080 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Hden_2077 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Hden_3229 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Hden_3228 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Hden_1659 HpcH/HpaI aldolase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_3153 Citryl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_3241 MaoC domain protein dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D Hden_3369 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Hden_3363 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Hden_3323 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hdn00562]
D Hden_2451 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Hden_1448 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hdn00190]
D Hden_1946 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Hden_1945 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Hden_1943 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Hden_1940 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Hden_1938 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Hden_1937 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Hden_1936 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Hden_1935 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Hden_1934 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Hden_1933 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Hden_1932 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Hden_1931 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Hden_1930 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Hden_1929 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Hden_0375 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Hden_3238 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Hden_3236 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Hden_3240 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Hden_3239 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Hden_2528 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Hden_2526 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Hden_2527 Cytochrome b/b6 domain protein K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D Hden_2906 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Hden_2903 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Hden_2907 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Hden_2908 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Hden_2904 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Hden_1385 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Hden_2050 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Hden_2049 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Hden_2048 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Hden_2047 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Hden_3144 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Hden_3145 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Hden_2180 cytochrome c class I K08738 CYC; cytochrome c
D Hden_2733 cytochrome c class I K08738 CYC; cytochrome c
D Hden_1483 cytochrome c class I K08738 CYC; cytochrome c
D Hden_1054 cytochrome c class I K08738 CYC; cytochrome c
D Hden_3401 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Hden_3404 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Hden_3402 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Hden_3400 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Hden_3406 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Hden_2886 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Hden_2888 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Hden_2889 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Hden_2887 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Hden_3327 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Hden_2842 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Hden_0017 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_3296 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_2023 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_0669 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:hdn00710]
D Hden_1623 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Hden_2446 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_3131 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Hden_1524 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Hden_1622 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Hden_1847 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Hden_3130 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Hden_1448 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Hden_3129 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Hden_3221 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Hden_3150 putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Hden_2298 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Hden_2002 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Hden_3231 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:hdn00720]
D Hden_2002 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Hden_3150 putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Hden_3231 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Hden_0262 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Hden_3238 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Hden_3236 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Hden_3240 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Hden_3239 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Hden_3228 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Hden_3229 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2121 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Hden_3253 aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Hden_3176 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Hden_0838 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Hden_0837 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Hden_2317 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Hden_1659 HpcH/HpaI aldolase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_3153 Citryl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_3241 MaoC domain protein dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D Hden_1926 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Hden_2554 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_2560 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_0104 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Hden_3136 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Hden_0103 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Hden_3211 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Hden_1802 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Hden_2028 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2053 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2029 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_3455 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1655 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:hdn00680]
D Hden_1323 PQQ-dependent dehydrogenase, methanol/ethanol family K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D Hden_1322 extracellular solute-binding protein family 3 K16254 mxaJ; mxaJ protein
D Hden_1321 cytochrome c class I K16255 mxaG; cytochrome c-L
D Hden_0795 cytochrome c class I K16255 mxaG; cytochrome c-L
D Hden_1320 methanol dehydrogenase beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D Hden_1317 MxaA protein, putative K16256 mxaA; mxaA protein
D Hden_1316 von Willebrand factor type A K16257 mxaC; mxaC protein
D Hden_1315 conserved hypothetical protein K16258 mxaK; mxaK protein
D Hden_1314 von Willebrand factor type A K16259 mxaL; mxaL protein
D Hden_1313 Polyketide cyclase/dehydrase K16260 mxaD; mxaD protein
D Hden_1617 PQQ-dependent dehydrogenase, methanol/ethanol family K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D Hden_1869 PQQ-dependent dehydrogenase, methanol/ethanol family K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D Hden_1305 PQQ-dependent dehydrogenase, methanol/ethanol family K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D Hden_2848 PQQ-dependent dehydrogenase, methanol/ethanol family K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D Hden_0607 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D Hden_2466 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Hden_0527 Soluble ligand binding domain protein K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D Hden_2465 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Hden_2464 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Hden_2468 hypothetical protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D Hden_0960 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Hden_0290 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_3154 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_2642 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Hden_1768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Hden_3150 putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Hden_3231 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Hden_3151 succinyl-CoA synthetase, alpha subunit K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D Hden_3152 succinyl-CoA synthetase, beta subunit K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D Hden_1659 HpcH/HpaI aldolase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_3153 Citryl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_3131 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Hden_1524 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Hden_0535 NADH:flavin oxidoreductase/NADH oxidase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D Hden_0194 NADH:flavin oxidoreductase/NADH oxidase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D Hden_0512 glutamine amidotransferase class-II K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]
D Hden_0776 glutamine amidotransferase class-II K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]
D Hden_0513 glutamate synthase alpha subunit domain protein K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D Hden_0777 glutamate synthase alpha subunit domain protein K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D Hden_0778 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D Hden_0514 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D Hden_3116 sarcosine oxidase, beta subunit family K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D Hden_3117 Sarcosine oxidase delta subunit heterotetrameric K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D Hden_3118 sarcosine oxidase, alpha subunit family K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D Hden_3119 Sarcosine oxidase gamma subunit K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D Hden_1610 formylmethanofuran dehydrogenase subunit A K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12]
D Hden_1611 formylmethanofuran dehydrogenase subunit B K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12]
D Hden_1608 formylmethanofuran dehydrogenase subunit C K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12]
D Hden_1609 formylmethanofuran/tetrahydromethanopterin N-formyltransferase K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]
D Hden_1477 methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D Hden_1479 Methylene-tetrahydromethanopterin dehydrogenase K10714 mtdB; methylene-tetrahydromethanopterin dehydrogenase [EC:1.5.1.-]
D Hden_1474 formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D Hden_2126 formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D Hden_1875 formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D Hden_0691 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Hden_0690 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Hden_0694 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Hden_0689 iron-sulfur cluster-binding protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Hden_0693 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Hden_2029 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2028 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2053 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_3455 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1655 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_3325 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Hden_2407 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_0549 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_1466 protein of unknown function DUF556 K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153]
D Hden_1468 aspartate/glutamate/uridylate kinase K07144 mfnE; 5-(aminomethyl)-3-furanmethanol phosphate kinase [EC:2.7.4.31]
D Hden_1472 H4MPT-linked C1 transfer pathway protein K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131]
C 00910 Nitrogen metabolism [PATH:hdn00910]
D Hden_2949 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Hden_0925 nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Hden_0926 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Hden_0927 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Hden_0929 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Hden_2953 molybdopterin oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D Hden_2951 nitrite reductase (NAD(P)H), large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D Hden_2952 nitrite reductase (NAD(P)H), small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D Hden_0591 nitrite reductase, copper-containing protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D Hden_0582 Nitric-oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D Hden_0581 cytochrome c class I K02305 norC; nitric oxide reductase subunit C
D Hden_1882 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D Hden_0996 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Hden_0531 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Hden_0775 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1424 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0975 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_2221 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0515 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_2652 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Hden_2653 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Hden_0606 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D Hden_2197 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Hden_3246 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hdn00920]
D Hden_0756 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D Hden_2679 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Hden_2675 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Hden_2674 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Hden_2673 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Hden_1046 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Hden_1047 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Hden_0869 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Hden_1048 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Hden_0703 conserved hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Hden_0702 conserved hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Hden_1147 sulfur oxidation protein SoxZ K17226 soxY; sulfur-oxidizing protein SoxY
D Hden_0704 sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D Hden_0338 conserved hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D Hden_1400 thiosulfate-binding protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D Hden_1000 sulfur oxidation protein SoxZ K17226 soxY; sulfur-oxidizing protein SoxY
D Hden_0705 sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Hden_1399 sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Hden_0706 5'-Nucleotidase domain protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Hden_1146 oxidoreductase molybdopterin binding protein K17225 soxC; sulfane dehydrogenase subunit SoxC
D Hden_1145 cytochrome c class I K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D Hden_1490 flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D Hden_1491 nitrite and sulphite reductase 4Fe-4S region K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Hden_0718 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Hden_1401 Flavocytochrome c sulphide dehydrogenase flavin-binding protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Hden_3428 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Hden_1960 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Hden_0757 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Hden_1796 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Hden_3512 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Hden_3429 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Hden_2764 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Hden_0737 alpha/beta hydrolase fold protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Hden_0025 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Hden_0743 selenium-binding protein, putative K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D Hden_2614 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D Hden_1982 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hdn00061]
D Hden_3176 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Hden_0838 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Hden_0837 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Hden_2317 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Hden_1710 acyl carrier protein K02078 acpP; acyl carrier protein
D Hden_0563 hypothetical protein K02078 acpP; acyl carrier protein
D Hden_1712 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Hden_1292 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Hden_3197 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Hden_3506 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Hden_1709 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0554 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0557 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0558 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0555 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_2730 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_1711 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_0561 MaoC domain protein dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_2462 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_3507 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Hden_1908 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Hden_0559 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Hden_1970 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2030 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2051 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_3505 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_1836 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hdn00071]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_1402 Protein of unknown function DUF1974 K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Hden_1836 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Hden_2665 AMP-dependent synthetase and ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:hdn00074]
D Hden_2243 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Hden_1710 acyl carrier protein K02078 acpP; acyl carrier protein
D Hden_0563 hypothetical protein K02078 acpP; acyl carrier protein
D Hden_1712 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hdn00561]
D Hden_2642 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Hden_1291 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Hden_0634 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Hden_2758 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Hden_2850 glycosyl transferase group 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:hdn00564]
D Hden_3452 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Hden_3517 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Hden_0634 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Hden_2758 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Hden_2650 alpha/beta hydrolase fold protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D Hden_2665 AMP-dependent synthetase and ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D Hden_1063 Ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D Hden_1062 Ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D Hden_2491 Phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D Hden_1913 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Hden_0276 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Hden_0275 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Hden_2013 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Hden_2845 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Hden_2541 conserved hypothetical protein K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
D Hden_2542 Methyltransferase type 11 K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase
D Hden_0684 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:hdn00600]
D Hden_3051 Ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Hden_0483 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Hden_0488 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Hden_2940 sulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:hdn01040]
D Hden_3260 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Hden_3308 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hdn00230]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Hden_2508 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Hden_1724 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Hden_2591 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Hden_2851 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Hden_2106 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Hden_2100 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Hden_2102 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Hden_2847 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Hden_2625 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Hden_2624 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Hden_2099 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Hden_2092 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Hden_3460 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Hden_2523 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Hden_1267 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Hden_2506 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Hden_2754 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Hden_0825 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Hden_2855 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Hden_3390 Ham1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Hden_0831 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Hden_1706 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Hden_2760 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0809 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0950 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0808 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Hden_1257 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Hden_1996 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Hden_2246 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Hden_2281 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Hden_2841 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Hden_0822 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Hden_2711 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Hden_1950 adenylate/guanylate cyclase with Chase sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Hden_2405 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Hden_2442 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Hden_1038 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Hden_1692 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Hden_1046 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Hden_1047 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Hden_2809 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Hden_2810 urease, gamma subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:hdn00240]
D Hden_1813 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Hden_1817 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Hden_0636 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Hden_0635 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Hden_1993 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Hden_0417 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Hden_0548 dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Hden_2296 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Hden_3381 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Hden_1916 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Hden_2855 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Hden_1692 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Hden_2709 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Hden_3273 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Hden_1453 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Hden_2328 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Hden_1267 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Hden_2442 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Hden_0026 2-deoxycytidine 5-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Hden_2760 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0809 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0950 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0808 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Hden_1996 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Hden_1731 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Hden_3513 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Hden_0268 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Hden_3480 nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hdn00250]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_1999 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Hden_2133 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Hden_1356 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Hden_0290 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_3154 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_0970 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Hden_3340 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Hden_0035 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Hden_2405 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Hden_2092 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Hden_0636 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Hden_0972 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Hden_0973 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Hden_2652 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Hden_2653 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Hden_0531 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Hden_2345 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Hden_0775 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1424 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0975 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_2221 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0515 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1813 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Hden_1817 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Hden_0404 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Hden_2102 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Hden_1649 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Hden_1724 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hdn00260]
D Hden_3525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Hden_3321 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Hden_1523 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Hden_2892 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D Hden_2900 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Hden_0960 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Hden_0290 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_3154 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_2642 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Hden_3325 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Hden_2407 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_0549 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_0959 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Hden_2792 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Hden_2794 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0085 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0539 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_1299 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Hden_0696 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Hden_2793 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Hden_0276 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Hden_1856 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Hden_2318 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Hden_2319 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:hdn00270]
D Hden_0757 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Hden_1796 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Hden_3512 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Hden_3429 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Hden_1082 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Hden_1800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Hden_2055 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Hden_3491 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Hden_2744 S-adenosylmethionine decarboxylase related protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Hden_2525 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D Hden_2506 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Hden_2520 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Hden_3015 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Hden_2305 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Hden_3525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Hden_3321 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Hden_1523 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Hden_2764 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Hden_0737 alpha/beta hydrolase fold protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Hden_1519 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Hden_0025 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Hden_2496 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Hden_2582 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Hden_3219 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_3428 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Hden_1960 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Hden_3231 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Hden_2407 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_0549 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hdn00280]
D Hden_2496 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_2237 Carbamoyl-phosphate synthase L chain ATP-binding protein K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Hden_1501 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Hden_1926 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Hden_2554 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_2560 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_1858 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Hden_2381 6-phosphogluconate dehydrogenase NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Hden_0971 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hdn00290]
D Hden_1856 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Hden_3369 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Hden_3363 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Hden_3323 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Hden_2080 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Hden_2077 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Hden_2076 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Hden_0613 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Hden_1253 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Hden_2496 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Hden_2072 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Hden_1397 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hdn00300]
D Hden_1523 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Hden_3525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Hden_3321 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Hden_2252 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Hden_3326 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Hden_0032 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Hden_0019 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Hden_0030 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Hden_3315 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Hden_0037 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Hden_0238 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Hden_0239 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Hden_2166 Mur ligase middle domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hdn00310]
D Hden_3226 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_0973 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Hden_1435 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Hden_1688 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:hdn00220]
D Hden_0020 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Hden_3340 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Hden_0035 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Hden_2809 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Hden_2810 urease, gamma subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D Hden_0404 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Hden_2102 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Hden_0775 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1424 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0975 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_2221 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0515 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1813 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Hden_1817 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Hden_0531 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_3184 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Hden_3419 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Hden_1386 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Hden_0019 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Hden_0023 acetylornithine deacetylase (ArgE) K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:hdn00330]
D Hden_3338 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Hden_3337 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Hden_1144 Saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D Hden_1142 carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D Hden_1853 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Hden_2744 S-adenosylmethionine decarboxylase related protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Hden_0977 aminotransferase class-III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D Hden_1429 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D Hden_0974 Aldehyde Dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D Hden_2500 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Hden_2345 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Hden_0206 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Hden_0207 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Hden_0410 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Hden_2563 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_1688 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:hdn00340]
D Hden_2573 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Hden_2574 tRNA synthetase class II (G H P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Hden_3285 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Hden_1787 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Hden_3354 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Hden_1473 histidine biosynthesis protein K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D Hden_3350 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Hden_3358 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Hden_3348 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Hden_2224 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_2763 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_2649 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D Hden_2713 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Hden_0229 methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:hdn00350]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_2224 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_2763 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_0973 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:hdn00360]
D Hden_3415 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_2224 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_2763 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_1688 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism [PATH:hdn00380]
D Hden_3226 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2518 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Hden_2617 Catalase related subgroup K03781 katE; catalase [EC:1.11.1.6]
D Hden_0525 Catalase related subgroup K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hdn00400]
D Hden_1843 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Hden_3170 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D Hden_0839 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Hden_3272 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Hden_2329 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Hden_1972 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Hden_1446 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Hden_1443 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Hden_1442 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Hden_2320 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Hden_1473 histidine biosynthesis protein K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D Hden_1441 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Hden_2318 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Hden_2319 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Hden_2762 Prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D Hden_2731 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_2224 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_2763 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:hdn00410]
D Hden_0972 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Hden_2346 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Hden_0971 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_1645 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
C 00430 Taurine and hypotaurine metabolism [PATH:hdn00430]
D Hden_2667 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Hden_0970 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Hden_2028 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2053 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Hden_2029 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Hden_2052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D Hden_1727 metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:hdn00450]
D Hden_1082 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Hden_1800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Hden_2055 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Hden_0759 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Hden_2354 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Hden_1633 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Hden_3371 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Hden_1046 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Hden_1047 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Hden_1729 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hdn00460]
D Hden_2667 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Hden_0960 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hdn00470]
D Hden_1721 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Hden_1688 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Hden_0246 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Hden_0404 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Hden_2102 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Hden_3504 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Hden_0241 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Hden_1629 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Hden_3315 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Hden_0037 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:hdn00480]
D Hden_2667 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Hden_2582 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Hden_3219 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Hden_1699 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Hden_0326 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Hden_1141 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Hden_0393 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Hden_2144 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Hden_2078 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Hden_1845 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Hden_2121 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Hden_2835 hypothetical protein K05360 TXNDC12; protein-disulfide reductase (glutathione) [EC:1.8.4.2]
D Hden_1961 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Hden_2894 Redoxin domain protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D Hden_1853 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D Hden_1151 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:hdn00540]
D Hden_1907 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Hden_0250 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Hden_1909 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Hden_1906 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Hden_1905 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Hden_2588 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Hden_2659 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Hden_1455 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Hden_2732 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Hden_2587 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Hden_1668 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Hden_0070 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Hden_3314 Lipid A 3-O-deacylase-related protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hdn00541]
D Hden_2657 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Hden_0092 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Hden_3055 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Hden_3127 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Hden_0501 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Hden_0502 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Hden_0503 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Hden_0277 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Hden_0101 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Hden_0100 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Hden_1648 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Hden_0185 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Hden_0186 NAD-dependent epimerase/dehydratase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D Hden_0187 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D Hden_0105 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:hdn00550]
D Hden_2715 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Hden_0245 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Hden_0244 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Hden_0241 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Hden_0238 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Hden_0246 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Hden_0239 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Hden_2166 Mur ligase middle domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Hden_1914 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Hden_0394 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Hden_0240 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Hden_0243 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Hden_2776 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Hden_1103 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0844 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0009 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0047 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0043 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Hden_0237 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Hden_1732 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:hdn00552]
D Hden_0394 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Hden_1347 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Hden_0105 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hdn00543]
D Hden_0440 putative colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D Hden_1346 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D Hden_0757 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Hden_1796 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hdn00730]
D Hden_0794 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Hden_2383 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Hden_1625 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Hden_2359 transcriptional regulator, Rrf2 family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Hden_2666 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Hden_1977 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Hden_0486 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Hden_0788 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Hden_2663 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Hden_2449 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Hden_2662 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Hden_0967 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Hden_1038 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:hdn00740]
D Hden_1395 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Hden_0964 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Hden_0962 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Hden_0965 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Hden_0963 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Hden_2609 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Hden_0564 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:hdn00750]
D Hden_1892 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Hden_3243 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Hden_0056 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D Hden_2407 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_0549 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_1704 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Hden_2244 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Hden_2900 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hdn00760]
D Hden_1999 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Hden_1998 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Hden_2000 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Hden_1267 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Hden_0208 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Hden_1692 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Hden_1840 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Hden_1679 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Hden_1088 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Hden_2631 putative transmembrane NAD(P) transhydrogenase subunit alpha part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Hden_2632 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Hden_2629 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Hden_0973 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:hdn00770]
D Hden_2080 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Hden_2077 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Hden_2076 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Hden_0613 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Hden_1253 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Hden_0855 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Hden_2836 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Hden_2346 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Hden_3286 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D Hden_3514 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Hden_1692 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Hden_2174 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Hden_3271 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Hden_2243 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Hden_1344 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Hden_1295 Phosphopantetheinyl transferase-like protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Hden_0089 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Hden_2496 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:hdn00780]
D Hden_3506 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Hden_1709 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0554 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0557 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0558 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0555 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_2730 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_1711 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_0561 MaoC domain protein dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_2462 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_1908 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Hden_0559 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Hden_1970 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2030 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2051 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_3505 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_3194 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Hden_3196 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Hden_3195 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Hden_1773 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Hden_3193 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Hden_1928 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hdn00785]
D Hden_2234 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Hden_2670 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Hden_0683 Radical SAM domain protein K09711 lipS1; lipoyl synthase
D Hden_0685 Radical SAM domain protein K24689 lipS2; lipoyl synthase
D Hden_0686 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0894 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Hden_0786 alpha/beta hydrolase fold protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Hden_0895 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Hden_3227 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Hden_3226 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Hden_2792 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Hden_2794 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0085 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0539 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_1299 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Hden_0696 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Hden_2793 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:hdn00790]
D Hden_2720 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Hden_1786 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Hden_1467 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Hden_1482 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Hden_2415 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Hden_0270 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Hden_2316 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Hden_1395 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Hden_0964 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Hden_2925 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Hden_1775 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Hden_1390 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Hden_1481 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Hden_1774 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Hden_1770 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Hden_1776 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Hden_1480 beta-ribofuranosylaminobenzene 5'-phosphate synthase family K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D Hden_0721 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Hden_1417 dihydrofolate reductase K17364 dmrA; dihydromethanopterin reductase [EC:1.5.1.47]
D Hden_1476 alpha-L-glutamate ligase, RimK family K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D Hden_2752 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Hden_1440 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Hden_2015 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Hden_2874 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Hden_1439 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Hden_2750 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:hdn00670]
D Hden_0270 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Hden_0104 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Hden_3136 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Hden_0103 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Hden_3211 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Hden_0960 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Hden_2851 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Hden_3460 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Hden_2723 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Hden_2794 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0085 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_0539 glycine cleavage T protein (aminomethyl transferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Hden_1800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Hden_0268 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Hden_1802 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Hden_2443 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hdn00860]
D Hden_0959 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Hden_1839 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_1903 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_0953 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Hden_3450 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Hden_3449 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Hden_3275 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Hden_2532 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Hden_0576 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Hden_3276 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Hden_2660 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Hden_2258 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Hden_2705 uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Hden_2906 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Hden_1385 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Hden_2696 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Hden_2698 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D Hden_2695 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D Hden_2691 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Hden_2692 putative precorrin methylase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Hden_3043 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D Hden_2694 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Hden_2693 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Hden_2697 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Hden_2690 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Hden_2699 cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Hden_3166 cobalt chelatase, pCobS small subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D Hden_3165 cobalt chelatase, pCobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D Hden_3412 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Hden_2702 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Hden_2703 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Hden_2704 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Hden_0671 L-threonine-O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D Hden_2701 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Hden_2577 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Hden_2578 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Hden_2796 Heme oxygenase-like protein K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Hden_0519 Protein of unknown function DUF2470 K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Hden_2600 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hdn00130]
D Hden_2584 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Hden_0565 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Hden_0564 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Hden_3524 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Hden_1669 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Hden_3309 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Hden_3545 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Hden_3045 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hdn00900]
D Hden_1977 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Hden_0486 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Hden_1912 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Hden_1682 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D Hden_2869 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Hden_2780 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Hden_2891 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Hden_0480 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_0564 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Hden_0989 isopentenyl-diphosphate delta-isomerase, type 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Hden_2777 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Hden_2868 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Hden_1914 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:hdn00909]
D Hden_0477 squalene/oxidosqualene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:hdn00906]
D Hden_1275 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:hdn00907]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_2510 Alcohol dehydrogenase zinc-binding domain protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D Hden_1980 short-chain dehydrogenase/reductase SDR K13775 atuG; citronellol/citronellal dehydrogenase
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Hden_1622 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:hdn00523]
D Hden_0501 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Hden_0502 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Hden_0503 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Hden_0502 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:hdn00332]
D Hden_0206 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Hden_0207 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hdn00261]
D Hden_1046 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Hden_1047 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Hden_3525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Hden_3321 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Hden_2252 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Hden_3326 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hdn00521]
D Hden_1865 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Hden_2451 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Hden_0501 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Hden_0502 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Hden_0503 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:hdn00525]
D Hden_0501 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Hden_0502 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hdn00401]
D Hden_2762 Prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_2224 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_2763 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:hdn00405]
D Hden_2074 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D Hden_1446 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Hden_1443 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Hden_1712 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Hden_2730 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_1711 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_0561 MaoC domain protein dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_2462 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_1970 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2030 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2051 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_3505 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Hden_1710 acyl carrier protein K02078 acpP; acyl carrier protein
D Hden_0563 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hdn00999]
D Hden_3491 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Hden_3272 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:hdn00362]
D Hden_1713 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Hden_1632 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Hden_3415 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D Hden_0564 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:hdn00364]
D Hden_2297 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Hden_2787 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:hdn00625]
D Hden_0711 Glutathione S-transferase domain protein K17070 dcmA; dichloromethane dehalogenase [EC:4.5.1.3]
D Hden_1323 PQQ-dependent dehydrogenase, methanol/ethanol family K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D Hden_1320 methanol dehydrogenase beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D Hden_0340 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_0796 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D Hden_0783 PQQ-dependent enzyme-like protein K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hdn00361]
D Hden_2297 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Hden_2787 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Hden_1713 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:hdn00623]
D Hden_2297 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Hden_2787 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:hdn00622]
D Hden_1713 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:hdn00643]
D Hden_1713 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Hden_2747 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D Hden_2809 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Hden_2810 urease, gamma subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:hdn00930]
D Hden_1403 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hdn03020]
D Hden_1010 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Hden_1011 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Hden_1041 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Hden_2247 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hdn03010]
D Hden_2325 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Hden_1918 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Hden_1023 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Hden_2118 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Hden_1034 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Hden_1716 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Hden_1013 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Hden_1031 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Hden_1388 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Hden_1016 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Hden_1040 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Hden_1012 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Hden_1039 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Hden_1030 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Hden_3501 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Hden_3312 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Hden_1026 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Hden_1717 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Hden_1021 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Hden_3549 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Hden_2626 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Hden_1007 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Hden_1020 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Hden_1017 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Hden_1018 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Hden_1029 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Hden_1032 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Hden_1009 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Hden_1719 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Hden_1008 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Hden_1006 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Hden_1389 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Hden_1027 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Hden_1036 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Hden_1024 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Hden_1042 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Hden_1033 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Hden_3376 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Hden_0378 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Hden_0201 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Hden_1022 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Hden_1019 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Hden_1028 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Hden_2512 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Hden_0202 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Hden_3163 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Hden_1025 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Hden_1035 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Hden_2455 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Hden_2775 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Hden_0627 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Hden_0379 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Hden_2646 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Hden_R0048 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Hden_R0051 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Hden_R0052 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hdn00970]
D Hden_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Hden_R0043 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Hden_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Hden_R0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0016 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Hden_R0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Hden_R0017 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Hden_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Hden_R0008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Hden_R0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Hden_R0028 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Hden_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Hden_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Hden_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Hden_R0047 tRNA-His K14226 tRNA-His; tRNA His
D Hden_R0049 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Hden_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Hden_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Hden_R0021 tRNA-Met K14230 tRNA-Met; tRNA Met
D Hden_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D Hden_R0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Hden_R0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Hden_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Hden_R0013 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Hden_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Hden_R0006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0007 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Hden_R0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Hden_R0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Hden_R0012 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Hden_R0010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Hden_R0022 tRNA-Val K14237 tRNA-Val; tRNA Val
D Hden_R0036 tRNA-Val K14237 tRNA-Val; tRNA Val
D Hden_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Hden_1839 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_1903 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_0640 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Hden_0643 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Hden_0638 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Hden_2124 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Hden_2838 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Hden_2863 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Hden_2861 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Hden_1781 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Hden_1265 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Hden_1837 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Hden_1729 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Hden_2723 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Hden_1250 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Hden_3291 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Hden_2607 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Hden_0420 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Hden_1258 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Hden_1924 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Hden_2575 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Hden_0377 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Hden_0376 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Hden_2362 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Hden_3477 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hdn03060]
D Hden_1037 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Hden_1004 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Hden_1451 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Hden_1273 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Hden_1272 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Hden_1271 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Hden_3422 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Hden_3182 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Hden_3269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Hden_3313 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Hden_R0039 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Hden_3317 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Hden_1262 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Hden_1263 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Hden_1264 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Hden_2242 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Hden_2606 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hdn04122]
D Hden_2359 transcriptional regulator, Rrf2 family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Hden_3428 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Hden_1960 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Hden_0698 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Hden_2490 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Hden_2015 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Hden_2752 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Hden_2014 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Hden_1502 conserved hypothetical protein K03636 moaD; sulfur-carrier protein
D Hden_3511 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Hden_1440 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Hden_2874 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Hden_0789 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D Hden_2664 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:hdn03018]
D Hden_3408 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Hden_3407 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Hden_0842 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Hden_1768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Hden_3502 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Hden_2561 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Hden_0630 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Hden_0352 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Hden_2571 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Hden_3277 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Hden_1927 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Hden_3384 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Hden_2546 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Hden_1689 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Hden_2842 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Hden_0017 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_3296 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_2023 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_0669 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_2538 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hdn03030]
D Hden_3027 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_3270 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_1921 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Hden_2729 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Hden_1730 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Hden_3289 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Hden_0860 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Hden_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Hden_1720 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Hden_1819 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Hden_2182 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Hden_2893 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Hden_2877 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Hden_3207 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Hden_0360 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Hden_0252 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hdn03410]
D Hden_3359 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Hden_2879 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Hden_3546 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Hden_0520 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Hden_1995 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Hden_0344 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Hden_2249 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Hden_2872 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Hden_1255 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Hden_0360 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Hden_1525 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Hden_0252 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hdn03420]
D Hden_1654 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Hden_2189 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Hden_2476 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Hden_2011 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Hden_0258 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Hden_0360 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Hden_0252 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hdn03430]
D Hden_3474 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Hden_2601 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Hden_0258 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Hden_2590 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Hden_1978 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Hden_1525 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Hden_2182 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Hden_1921 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Hden_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Hden_2729 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Hden_3289 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Hden_1730 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Hden_3027 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_3270 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_0860 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Hden_0252 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Hden_1189 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:hdn03440]
D Hden_1525 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Hden_2182 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Hden_0005 SMC domain protein K03629 recF; DNA replication and repair protein RecF
D Hden_2239 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Hden_2727 recombination protein RecR K06187 recR; recombination protein RecR
D Hden_2125 recA protein K03553 recA; recombination protein RecA
D Hden_0360 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Hden_2437 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Hden_2435 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Hden_2438 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Hden_1652 DEAD/DEAH box helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Hden_1921 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Hden_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Hden_2729 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Hden_3289 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Hden_1730 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Hden_3027 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_3270 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_0860 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Hden_3220 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:hdn03450]
D Hden_1068 Ku protein K10979 ku; DNA end-binding protein Ku
D Hden_1069 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Hden_1070 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D Hden_1151 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hdn02010]
D Hden_0756 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D Hden_2679 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Hden_2675 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Hden_2674 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Hden_2673 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Hden_0463 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Hden_0464 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Hden_0465 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Hden_1425 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein
D Hden_1428 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D Hden_1427 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Hden_1426 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Hden_0485 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein
D Hden_1805 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Hden_0300 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Hden_0299 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Hden_0298 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Hden_0297 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Hden_1083 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Hden_2819 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_0532 ABC transporter periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_0078 ABC transporter periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_2817 conserved hypothetical protein K11959 urtA; urea transport system substrate-binding protein
D Hden_2816 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Hden_2815 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Hden_2814 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Hden_2813 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Hden_2734 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Hden_2735 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Hden_2736 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Hden_2737 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Hden_2738 ABC transporter related protein K13896 yejF; microcin C transport system ATP-binding protein
D Hden_0294 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Hden_2781 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Hden_2782 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Hden_1923 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Hden_1922 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Hden_3248 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D Hden_3249 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Hden_3251 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Hden_3252 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Hden_1700 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Hden_1701 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Hden_0398 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Hden_1879 copper ABC transporter, permease protein NosY K19341 nosY; Cu-processing system permease protein
D Hden_1880 ABC transporter related protein K19340 nosF; Cu-processing system ATP-binding protein
D Hden_2756 Cell division protein-like protein K09811 ftsX; cell division transport system permease protein
D Hden_2755 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Hden_0500 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Hden_2085 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Hden_2531 ABC transporter related protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:hdn02060]
D Hden_2303 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Hden_2302 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Hden_3526 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Hden_0395 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hdn03070]
D Hden_1247 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Hden_2156 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Hden_2154 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F
D Hden_2153 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Hden_2152 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D Hden_2151 hypothetical protein K02458 gspI; general secretion pathway protein I
D Hden_2150 hypothetical protein K02459 gspJ; general secretion pathway protein J
D Hden_2149 hypothetical protein K02460 gspK; general secretion pathway protein K
D Hden_2148 Fimbrial assembly family protein K02461 gspL; general secretion pathway protein L
D Hden_2147 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D Hden_2155 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Hden_1272 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Hden_1273 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Hden_1004 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Hden_1451 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Hden_1037 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Hden_1271 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Hden_3422 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Hden_3182 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Hden_3317 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Hden_3269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Hden_3313 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Hden_1262 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Hden_1263 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Hden_1264 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hdn02020]
D Hden_0301 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Hden_0295 two component transcriptional regulator PhoB, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Hden_0300 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Hden_2499 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Hden_2498 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Hden_1133 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_0274 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_0938 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Hden_3443 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Hden_0937 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Hden_0936 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Hden_1743 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Hden_1742 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Hden_3094 flagellin domain protein K02406 fliC; flagellin
D Hden_3110 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Hden_2934 osmosensitive K channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Hden_2935 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Hden_2931 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Hden_2932 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Hden_2933 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Hden_1385 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Hden_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Hden_3520 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Hden_2300 integral membrane sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Hden_2299 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D Hden_3242 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Hden_1475 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Hden_0597 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Hden_0598 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Hden_0926 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Hden_0927 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Hden_0929 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Hden_0928 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D Hden_1325 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_0815 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_1377 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_0722 two component transcriptional regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D Hden_0814 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_1376 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_1307 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_1326 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_3148 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D Hden_0427 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D Hden_0426 conserved hypothetical protein K07347 fimD; outer membrane usher protein
D Hden_0315 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Hden_0316 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Hden_0318 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Hden_0319 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Hden_0321 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Hden_0322 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Hden_0323 Type II secretion system F domain protein K12510 tadB; tight adherence protein B
D Hden_0324 Type II secretion system F domain protein K12511 tadC; tight adherence protein C
D Hden_3475 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Hden_2220 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Hden_1684 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Hden_1685 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Hden_0775 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1424 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0975 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_2221 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0515 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1686 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Hden_1687 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_0397 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Hden_3067 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Hden_0763 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Hden_3072 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0818 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0602 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Hden_2797 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0102 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_3068 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Hden_0603 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Hden_3069 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Hden_3065 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3070 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_0867 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3066 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_0762 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_1862 integral membrane sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Hden_3519 histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Hden_0626 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D Hden_0625 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Hden_2127 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Hden_0868 Protein of unknown function DUF2328 K13588 chpT; histidine phosphotransferase ChpT
D Hden_2486 two component transcriptional regulator, winged helix family K13584 ctrA; two-component system, cell cycle response regulator CtrA
D Hden_2647 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D Hden_0916 integral membrane sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Hden_0725 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Hden_0915 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Hden_2710 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Hden_0384 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Hden_0404 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Hden_0012 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Hden_0013 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D Hden_2528 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Hden_2526 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Hden_2527 Cytochrome b/b6 domain protein K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D Hden_2180 cytochrome c class I K08738 CYC; cytochrome c
D Hden_2733 cytochrome c class I K08738 CYC; cytochrome c
D Hden_1483 cytochrome c class I K08738 CYC; cytochrome c
D Hden_1054 cytochrome c class I K08738 CYC; cytochrome c
D Hden_2050 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Hden_2049 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Hden_2048 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Hden_2047 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Hden_3144 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Hden_3145 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Hden_1247 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Hden_1422 SAM-dependent methyltransferase K19620 phcB; extracellular factor (EF) 3-hydroxypalmitic acid methyl ester biosynthesis protein
D Hden_1355 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Hden_1381 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Hden_1382 lipopolysaccharide biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Hden_3123 histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:hdn04148]
D Hden_1853 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Hden_2528 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hdn02024]
D Hden_1689 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Hden_1446 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Hden_1443 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Hden_1843 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Hden_2074 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D Hden_2935 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Hden_0722 two component transcriptional regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D Hden_2819 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_0532 ABC transporter periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_0078 ABC transporter periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_1836 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Hden_2710 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Hden_0384 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Hden_2511 transcriptional regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Hden_2783 putative Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Hden_1395 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Hden_0962 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Hden_1656 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Hden_3422 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Hden_1272 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Hden_1004 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Hden_1451 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Hden_1037 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Hden_1271 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Hden_3182 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Hden_3317 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Hden_3269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Hden_3313 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hdn02030]
D Hden_3072 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0818 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0602 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Hden_2797 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0102 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_3069 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Hden_3068 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Hden_0603 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Hden_3065 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3070 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_0867 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3071 hypothetical protein K03409 cheX; chemotaxis protein CheX
D Hden_3066 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_0762 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_0763 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Hden_3064 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Hden_3067 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Hden_3107 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Hden_3109 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D Hden_3108 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Hden_3110 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Hden_3091 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Hden_2453 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hdn02040]
D Hden_3102 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Hden_3093 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Hden_3107 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Hden_3112 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Hden_3096 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Hden_3109 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D Hden_3108 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Hden_2128 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Hden_3095 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Hden_3077 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Hden_3057 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D Hden_3056 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Hden_3106 type III secretion exporter K02401 flhB; flagellar biosynthesis protein FlhB
D Hden_3100 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Hden_3104 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D Hden_3103 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Hden_3078 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Hden_3083 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Hden_3111 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Hden_3101 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Hden_3097 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Hden_3099 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Hden_3059 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Hden_3082 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Hden_3081 flagellar hook-associated 3 family protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Hden_3094 flagellin domain protein K02406 fliC; flagellin
D Hden_3110 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Hden_3091 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Hden_2453 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Hden_3090 hypothetical protein K10564 motC; chemotaxis protein MotC
D Hden_3089 flagellar hook-length control protein K10565 motD; chemotaxis protein MotD
D Hden_1820 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Hden_0397 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Hden_1768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:hdn04980]
D Hden_3412 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Hden_2088 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D Hden_2568 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D Hden_2554 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_2560 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Hden_1800 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hdn01501]
D Hden_0221 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Hden_0518 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Hden_2287 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Hden_0799 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_2033 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_0798 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_2032 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_1247 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Hden_1103 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0844 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0009 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0047 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0237 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hdn01502]
D Hden_0246 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Hden_1721 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Hden_0239 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Hden_2166 Mur ligase middle domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Hden_0240 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Hden_0243 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hdn01503]
D Hden_0070 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Hden_0843 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Hden_2016 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Hden_1133 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_0274 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_0799 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_2033 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_0798 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_2032 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_1247 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Hden_1907 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Hden_3520 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hdn01000]
C 01001 Protein kinases [BR:hdn01001]
D Hden_1382 lipopolysaccharide biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Hden_1354 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Hden_0454 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Hden_0284 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Hden_0301 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Hden_2499 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Hden_2934 osmosensitive K channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Hden_2300 integral membrane sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Hden_0597 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Hden_1325 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_0815 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_1377 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_1684 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Hden_1686 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Hden_3069 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Hden_1862 integral membrane sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Hden_3519 histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Hden_2127 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Hden_0916 integral membrane sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Hden_0012 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Hden_3123 histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:hdn01009]
D Hden_2305 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Hden_3140 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:hdn01002]
D Hden_2606 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Hden_2157 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Hden_0317 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Hden_2569 peptidase C15 pyroglutamyl peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D Hden_0831 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Hden_0976 Gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D Hden_1724 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Hden_2652 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Hden_1649 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Hden_2133 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Hden_1356 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Hden_2477 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Hden_3377 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_0954 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_2448 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_2637 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_1081 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_0968 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_0267 Abortive infection protein K07052 K07052; CAAX protease family protein
D Hden_1141 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Hden_3255 Peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D Hden_2635 oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Hden_2604 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Hden_2603 processing peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D Hden_1699 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Hden_0326 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Hden_0030 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Hden_3374 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Hden_0253 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Hden_2416 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Hden_3457 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Hden_1911 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Hden_0422 peptidase U6 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Hden_1133 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_0274 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_1092 Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D Hden_1732 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Hden_1958 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Hden_1956 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Hden_1901 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Hden_2242 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Hden_0410 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Hden_2563 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Hden_3409 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Hden_2324 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Hden_3523 Rhomboid family protein K07059 K07059; rhomboid family protein
D Hden_1110 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Hden_2979 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Hden_3347 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Hden_2667 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Hden_0568 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D Hden_0567 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D Hden_0044 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D Hden_0272 HflC protein K04087 hflC; modulator of FtsH protease HflC
D Hden_0271 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:hdn01003]
D Hden_2094 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Hden_1151 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Hden_3051 Ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Hden_0483 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Hden_0488 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D Hden_2850 glycosyl transferase group 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D Hden_2776 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Hden_0043 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Hden_1103 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0844 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0009 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0047 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_1347 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Hden_1412 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Hden_1641 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Hden_1346 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D Hden_1361 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hdn01005]
D Hden_1907 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Hden_1905 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Hden_0250 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Hden_1909 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Hden_2093 phosphoesterase PA-phosphatase related protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D Hden_1906 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Hden_2588 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Hden_1668 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Hden_0041 hypothetical protein K12980 lpxQ; lipid A oxidase
D Hden_0588 hypothetical protein K12980 lpxQ; lipid A oxidase
D Hden_2587 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Hden_3314 Lipid A 3-O-deacylase-related protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Hden_0070 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Hden_1455 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Hden_2732 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Hden_2659 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hdn01011]
D Hden_2715 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Hden_0245 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Hden_0244 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Hden_0241 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Hden_0238 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Hden_0246 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Hden_1721 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Hden_3504 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Hden_0240 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Hden_0243 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Hden_0394 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Hden_3476 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Hden_1103 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0844 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0009 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0047 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Hden_0043 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Hden_0237 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Hden_1732 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Hden_2776 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Hden_3377 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_0954 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_2448 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_2637 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_1081 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_0968 ErfK/YbiS/YcfS/YnhG family protein K21470 ycbB; L,D-transpeptidase YcbB
D Hden_0422 peptidase U6 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Hden_2253 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Hden_3266 MltA domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D Hden_1708 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Hden_1733 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Hden_2392 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Hden_2393 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Hden_0881 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Hden_0843 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Hden_2016 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hdn01004]
D Hden_1712 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Hden_1292 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Hden_3197 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Hden_3506 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Hden_1709 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0554 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0557 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0558 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_0555 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Hden_2730 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_1711 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_0561 MaoC domain protein dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_2462 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Hden_3507 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Hden_1908 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Hden_0559 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Hden_1970 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2030 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_2051 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_3505 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Hden_3260 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Hden_3308 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D Hden_3148 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D Hden_3455 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1655 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Hden_1836 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Hden_1291 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Hden_0634 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Hden_2758 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:hdn01008]
C 01006 Prenyltransferases [BR:hdn01006]
D Hden_2777 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Hden_2868 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Hden_1914 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Hden_1275 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Hden_2081 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Hden_2584 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Hden_2906 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:hdn01007]
D Hden_0420 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Hden_1839 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_1903 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_3396 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Hden_2362 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Hden_3477 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Hden_1837 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Hden_1258 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Hden_1729 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Hden_2607 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Hden_1250 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Hden_3291 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Hden_2838 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Hden_2575 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Hden_2863 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Hden_2861 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Hden_1265 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Hden_1924 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Hden_1781 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Hden_2124 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Hden_0377 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Hden_0376 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Hden_2471 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Hden_1522 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Hden_2224 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_2763 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Hden_0959 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Hden_3194 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Hden_0971 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Hden_0019 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Hden_0972 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Hden_0977 aminotransferase class-III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D Hden_3196 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Hden_1688 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Hden_2496 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Hden_2925 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Hden_0290 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_3154 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Hden_2407 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Hden_0549 Phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hdn00194]
D Hden_3406 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Hden_3404 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Hden_3402 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Hden_3401 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Hden_3400 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Hden_2888 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Hden_2889 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Hden_2887 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Hden_2886 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Hden_2885 FoF1 ATP synthase, subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hdn03000]
D Hden_3015 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Hden_1065 transcriptional regulator, AraC family K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D Hden_1153 transcriptional regulator, AraC family K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D Hden_2873 transcription activator effector binding protein K13652 K13652; AraC family transcriptional regulator
D Hden_2164 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Hden_0331 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Hden_0040 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Hden_2639 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Hden_0812 transcriptional regulator, LysR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D Hden_2672 transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D Hden_2790 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Hden_2236 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D Hden_0533 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Hden_0079 GntR domain protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D Hden_2936 transcriptional regulator, GntR family with aminotransferase domain protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Hden_1870 transcriptional regulator, GntR family with aminotransferase domain protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Hden_0716 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Hden_2913 transcriptional regulator, TetR family K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D Hden_0969 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Hden_1859 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D Hden_1154 transcriptional regulator, MarR family K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D Hden_3320 transcriptional regulator, MarR family K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D Hden_3483 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Hden_2511 transcriptional regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Hden_2783 putative Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Hden_0735 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D Hden_3508 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D Hden_2710 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Hden_0384 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Hden_1871 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Hden_0595 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Hden_0873 putative transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Hden_2177 putative transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Hden_2273 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D Hden_0997 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Hden_0302 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Hden_2339 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Hden_0682 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D Hden_2059 transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D Hden_1758 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Hden_1928 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Hden_0787 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Hden_0609 sigma54 specific transcriptional regulator, Fis family K15836 fhlA; formate hydrogenlyase transcriptional activator
D Hden_0466 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Hden_0710 DNA binding domain protein, excisionase family K17071 dcmR; transcriptional repressor of dcmA and dcmR
D Hden_2345 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Hden_1883 nitrous oxide expression regulator, NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D Hden_1509 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Hden_3168 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Hden_3284 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Hden_3158 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Hden_0437 NusG antitermination factor K05785 rfaH; transcriptional antiterminator RfaH
D Hden_3386 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Hden_2278 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D Hden_2896 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Hden_2130 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Hden_0961 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Hden_0234 MraZ domain protein K03925 mraZ; transcriptional regulator MraZ
D Hden_1254 Sel1 domain protein repeat-containing protein K25885 exoR; exopolysaccharide production negative regulator
C 03021 Transcription machinery [BR:hdn03021]
D Hden_1041 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Hden_1010 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Hden_1011 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Hden_2247 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Hden_1820 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Hden_1366 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Hden_2018 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D Hden_0397 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Hden_3494 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Hden_0966 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Hden_1005 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Hden_1561 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D Hden_0141 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D Hden_2130 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Hden_1812 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Hden_3277 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hdn03019]
D Hden_0842 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Hden_2241 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Hden_1927 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Hden_0630 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Hden_2561 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Hden_0352 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Hden_2571 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Hden_1768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Hden_3502 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Hden_3277 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Hden_3384 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Hden_2546 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Hden_1689 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Hden_2842 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Hden_0017 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_3296 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_2023 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_0669 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D Hden_2538 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Hden_3408 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Hden_3407 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Hden_3128 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:hdn03011]
D Hden_2325 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Hden_1918 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Hden_1023 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Hden_2118 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Hden_1034 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Hden_1716 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Hden_1013 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Hden_1031 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Hden_1388 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Hden_1016 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Hden_1040 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Hden_1012 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Hden_1039 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Hden_1030 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Hden_3501 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Hden_3312 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Hden_1026 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Hden_1717 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Hden_1021 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Hden_3549 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Hden_2626 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Hden_1007 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Hden_1020 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Hden_1017 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Hden_1018 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Hden_1029 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Hden_1032 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Hden_1719 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Hden_1008 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Hden_1006 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Hden_1009 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Hden_1389 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Hden_1027 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Hden_1036 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Hden_1024 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Hden_1042 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Hden_1033 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Hden_3376 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Hden_0378 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Hden_0201 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Hden_1022 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Hden_1019 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Hden_1028 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Hden_0202 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Hden_3163 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Hden_1025 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Hden_1035 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Hden_2455 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Hden_2775 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Hden_0627 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Hden_0379 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Hden_2646 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Hden_2512 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Hden_R0052 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Hden_R0048 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Hden_R0051 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hdn03009]
D Hden_2241 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Hden_2240 GTP-binding protein Era K03595 era; GTPase
D Hden_0204 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Hden_2130 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Hden_3494 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Hden_0966 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Hden_1005 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Hden_1561 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D Hden_0141 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D Hden_1705 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Hden_3458 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Hden_0827 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Hden_2595 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Hden_2583 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Hden_3282 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Hden_0235 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Hden_3398 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Hden_1975 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Hden_0905 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Hden_0823 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Hden_0210 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Hden_0848 SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Hden_0861 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D Hden_3344 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Hden_1974 (Uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Hden_2594 RNA-binding S4 domain protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Hden_1495 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Hden_2019 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Hden_3482 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Hden_2898 Ribosomal-protein-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D Hden_3310 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Hden_0308 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Hden_0254 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Hden_3149 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D Hden_0842 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Hden_0637 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Hden_0352 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Hden_0858 ribosome-associated GTPase EngA K03977 engA; GTPase
D Hden_1690 GTP-binding proten HflX K03665 hflX; GTPase
D Hden_1983 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Hden_2246 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Hden_2281 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Hden_3498 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Hden_3493 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Hden_0209 iojap-like protein K09710 ybeB; ribosome-associated protein
D Hden_3487 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Hden_0396 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Hden_2515 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:hdn03016]
D Hden_2004 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D Hden_1839 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_1903 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_1924 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Hden_2607 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Hden_3291 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Hden_1729 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Hden_1258 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Hden_2838 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Hden_2124 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Hden_1781 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Hden_1265 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Hden_1837 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Hden_1250 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Hden_2575 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Hden_0377 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Hden_0376 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Hden_2362 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Hden_3477 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Hden_0619 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Hden_3492 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Hden_2721 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Hden_3499 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Hden_2359 transcriptional regulator, Rrf2 family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Hden_1983 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Hden_2081 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Hden_3280 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Hden_3281 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Hden_0869 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Hden_3423 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Hden_R0003 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Hden_3387 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Hden_2839 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Hden_0400 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Hden_3261 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Hden_1808 ABC transporter related protein K06020 ettA; energy-dependent translational throttle protein EttA
D Hden_0420 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Hden_2863 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Hden_2861 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Hden_3396 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Hden_2276 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Hden_3468 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Hden_2593 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Hden_1867 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Hden_1683 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Hden_3485 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Hden_3316 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Hden_0265 Methyltransferase type 12 K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Hden_2120 tRNA/rRNA methyltransferase (SpoU) K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Hden_1277 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Hden_3378 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Hden_2529 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Hden_0849 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Hden_2490 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Hden_0698 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Hden_2352 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Hden_1994 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D Hden_2169 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Hden_1770 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Hden_1775 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Hden_1390 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Hden_1774 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Hden_1776 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Hden_0392 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Hden_2168 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Hden_2417 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Hden_3481 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Hden_3451 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Hden_0630 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Hden_3502 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hdn03012]
D Hden_3496 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Hden_0385 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Hden_2858 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Hden_1917 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Hden_1015 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Hden_2469 small GTP-binding protein K02355 fusA; elongation factor G
D Hden_1014 translation elongation factor G K02355 fusA; elongation factor G
D Hden_3528 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Hden_1915 ribosome recycling factor K02838 frr; ribosome recycling factor
D Hden_3529 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Hden_2513 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Hden_0363 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Hden_1438 translation elongation factor P K02356 efp; elongation factor P
D Hden_1437 Lysine--tRNA ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D Hden_0845 conserved hypothetical protein K02836 prfB; peptide chain release factor 2
D Hden_3356 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Hden_2492 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:hdn03110]
D Hden_0617 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Hden_3532 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Hden_1957 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Hden_3345 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Hden_3384 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Hden_2546 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Hden_3383 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Hden_0068 protein of unknown function DUF1332 K05801 djlA; DnaJ like chaperone protein
D Hden_0021 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Hden_3385 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Hden_2651 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D Hden_3160 RNA-binding S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D Hden_2547 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Hden_1133 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_0274 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Hden_2416 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Hden_2886 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Hden_0427 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D Hden_3269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Hden_3515 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D Hden_1447 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Hden_0930 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Hden_3183 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Hden_1703 SurA domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Hden_2311 thioredoxin K03671 TXN; thioredoxin
D Hden_3469 thioredoxin K05838 ybbN; putative thioredoxin
D Hden_3189 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D Hden_2112 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Hden_3247 periplasmic protein thiol/disulfide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:hdn04131]
D Hden_2855 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Hden_2835 hypothetical protein K05360 TXNDC12; protein-disulfide reductase (glutathione) [EC:1.8.4.2]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_2446 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Hden_3325 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Hden_2644 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Hden_3461 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Hden_3420 Clp domain protein K23612 WASL; neural Wiskott-Aldrich syndrome protein
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:hdn03032]
D Hden_2893 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Hden_3015 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Hden_3330 AAA ATPase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D Hden_1955 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Hden_0029 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Hden_1293 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Hden_2323 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Hden_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Hden_1720 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Hden_1819 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Hden_2182 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Hden_1921 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Hden_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Hden_0860 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Hden_3289 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Hden_1730 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Hden_3027 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_3270 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_2729 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Hden_2877 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Hden_3207 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Hden_0360 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Hden_0252 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Hden_1189 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Hden_2178 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Hden_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Hden_1514 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Hden_2347 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Hden_0631 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hdn03036]
D Hden_1151 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Hden_3015 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Hden_2241 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_2548 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Hden_1955 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Hden_0029 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Hden_1293 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Hden_2323 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Hden_0981 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D Hden_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Hden_1658 hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D Hden_3050 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Hden_1689 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Hden_0969 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Hden_2883 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Hden_1260 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Hden_1261 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Hden_0248 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Hden_2755 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Hden_0237 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Hden_3301 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Hden_0236 conserved hypothetical protein K03586 ftsL; cell division protein FtsL
D Hden_0247 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Hden_0242 cell cycle protein K03588 ftsW; cell division protein FtsW
D Hden_2756 Cell division protein-like protein K09811 ftsX; cell division transport system permease protein
D Hden_0249 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Hden_2444 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Hden_3232 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D Hden_0843 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Hden_2016 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Hden_0799 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_2033 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_3036 AAA ATPase K03496 parA; chromosome partitioning protein
D Hden_3283 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Hden_2411 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Hden_1764 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Hden_3284 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Hden_1514 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Hden_2347 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Hden_3281 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Hden_3282 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Hden_1277 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Hden_3223 integrase family protein K03733 xerC; integrase/recombinase XerC
D Hden_3173 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Hden_2749 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Hden_3292 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Hden_3421 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hdn03400]
D Hden_2216 DNA photolyase FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Hden_2879 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Hden_3359 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Hden_3186 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Hden_3513 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Hden_0331 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Hden_0344 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Hden_2249 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Hden_2872 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Hden_0520 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Hden_1995 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Hden_3546 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Hden_1255 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Hden_1525 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Hden_0252 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Hden_0360 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Hden_2189 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Hden_2476 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Hden_2011 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Hden_0258 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Hden_1010 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Hden_1011 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Hden_1041 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Hden_2247 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Hden_1654 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Hden_3474 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Hden_2601 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Hden_2590 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Hden_1978 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Hden_1921 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Hden_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Hden_0860 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Hden_3289 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Hden_1730 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Hden_3027 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_3270 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Hden_2729 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Hden_2182 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Hden_1189 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Hden_2125 recA protein K03553 recA; recombination protein RecA
D Hden_2437 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Hden_2435 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Hden_2438 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Hden_3220 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Hden_1722 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Hden_0005 SMC domain protein K03629 recF; DNA replication and repair protein RecF
D Hden_1652 DEAD/DEAH box helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Hden_2239 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Hden_2727 recombination protein RecR K06187 recR; recombination protein RecR
D Hden_2310 double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Hden_2309 double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Hden_2553 protein of unknown function DUF853 NPT hydrolase putative K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D Hden_1068 Ku protein K10979 ku; DNA end-binding protein Ku
D Hden_1069 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Hden_1070 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Hden_2178 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Hden_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Hden_0631 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Hden_1955 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Hden_0029 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Hden_1293 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Hden_2323 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Hden_2571 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Hden_2548 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Hden_0751 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Hden_1901 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Hden_0753 conserved hypothetical protein K14160 imuA; protein ImuA
D Hden_0754 conserved hypothetical protein K14161 imuB; protein ImuB
D Hden_0755 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Hden_1898 DNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D Hden_0416 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Hden_2760 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0809 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0950 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Hden_0808 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:hdn03029]
D Hden_3496 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Hden_0385 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Hden_1917 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Hden_1015 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Hden_2469 small GTP-binding protein K02355 fusA; elongation factor G
D Hden_1014 translation elongation factor G K02355 fusA; elongation factor G
D Hden_1289 ubiquinol-cytochrome c chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D Hden_3161 helicase domain protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D Hden_2240 GTP-binding protein Era K03595 era; GTPase
D Hden_2362 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Hden_3291 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Hden_2838 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Hden_1258 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Hden_0640 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Hden_0643 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Hden_0638 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Hden_3330 AAA ATPase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D Hden_2182 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Hden_1910 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Hden_3384 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Hden_3385 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Hden_2546 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Hden_2547 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Hden_3383 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Hden_2359 transcriptional regulator, Rrf2 family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Hden_2112 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Hden_2749 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Hden_2906 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Hden_2904 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Hden_1385 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Hden_3422 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Hden_2901 Surfeit locus 1 family protein K14998 SURF1; surfeit locus 1 family protein
D Hden_0742 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Hden_0011 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hdn02000]
D Hden_0500 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Hden_1406 glucan exporter ATP-binding protein K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3]
D Hden_2085 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Hden_2531 ABC transporter related protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D Hden_2454 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Hden_2334 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein
D Hden_0756 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D Hden_2679 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Hden_2675 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Hden_2674 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Hden_2673 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Hden_0463 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Hden_0464 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Hden_0465 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Hden_1425 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein
D Hden_1428 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D Hden_1427 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Hden_1426 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Hden_0673 putative sulfonate/nitrate transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Hden_1463 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Hden_0674 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Hden_1464 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Hden_1465 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Hden_0675 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Hden_0485 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein
D Hden_1805 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Hden_0300 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Hden_0299 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Hden_0298 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Hden_0297 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Hden_1083 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Hden_2819 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_0532 ABC transporter periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_0078 ABC transporter periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Hden_2817 conserved hypothetical protein K11959 urtA; urea transport system substrate-binding protein
D Hden_2816 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Hden_2815 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Hden_2814 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Hden_2813 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Hden_2286 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Hden_0781 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Hden_0337 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Hden_1656 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Hden_2734 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Hden_2735 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Hden_2736 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Hden_2737 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Hden_2738 ABC transporter related protein K13896 yejF; microcin C transport system ATP-binding protein
D Hden_0877 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D Hden_0878 transport system permease protein K25133 hmuU; heme transport system permease protein
D Hden_0879 ABC transporter related protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D Hden_1752 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Hden_1872 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Hden_1754 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Hden_1755 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Hden_0294 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Hden_2781 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Hden_2782 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Hden_1700 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Hden_1701 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Hden_0398 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Hden_1879 copper ABC transporter, permease protein NosY K19341 nosY; Cu-processing system permease protein
D Hden_1880 ABC transporter related protein K19340 nosF; Cu-processing system ATP-binding protein
D Hden_1923 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Hden_1922 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Hden_3248 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D Hden_3249 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Hden_3251 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Hden_3252 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Hden_2756 Cell division protein-like protein K09811 ftsX; cell division transport system permease protein
D Hden_2755 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Hden_0467 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Hden_1458 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Hden_0468 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Hden_1459 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Hden_2919 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Hden_2681 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Hden_1968 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Hden_3258 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Hden_2918 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Hden_2682 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Hden_1969 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Hden_3259 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Hden_2356 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Hden_2726 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Hden_2598 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Hden_3372 General substrate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D Hden_1628 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Hden_2949 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Hden_0925 nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Hden_3205 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Hden_2269 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Hden_2136 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Hden_0807 major facilitator superfamily MFS_1 K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D Hden_1814 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Hden_3461 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Hden_3526 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Hden_2303 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Hden_2302 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Hden_0395 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Hden_2349 major intrinsic protein K06188 aqpZ; aquaporin Z
D Hden_3306 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Hden_0393 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Hden_2144 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Hden_2078 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Hden_1086 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Hden_0670 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Hden_0407 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Hden_2012 MscS Mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D Hden_2717 magnesium transporter K06213 mgtE; magnesium transporter
D Hden_3110 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Hden_3091 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Hden_2453 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Hden_2426 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D Hden_2425 protein TolR K03560 tolR; biopolymer transport protein TolR
D Hden_0281 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D Hden_2928 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Hden_2391 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Hden_0228 CrcB protein K06199 crcB; fluoride exporter
D Hden_1499 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Hden_3169 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Hden_2484 conserved hypothetical protein K16079 omp31; outer membrane immunogenic protein
D Hden_2778 porin K16079 omp31; outer membrane immunogenic protein
D Hden_3533 porin K16079 omp31; outer membrane immunogenic protein
D Hden_1749 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D Hden_3031 porin K16079 omp31; outer membrane immunogenic protein
D Hden_2257 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Hden_1626 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Hden_0426 conserved hypothetical protein K07347 fimD; outer membrane usher protein
D Hden_1887 outer membrane autotransporter barrel domain protein K12516 bigA; putative surface-exposed virulence protein
D Hden_2834 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D Hden_0746 TonB-dependent receptor plug K16092 btuB; vitamin B12 transporter
D Hden_0540 TonB-dependent heme/hemoglobin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Hden_2137 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_0586 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_1331 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_0672 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_1751 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_0992 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_0227 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_0517 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Hden_1247 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Hden_1355 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Hden_1381 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Hden_2082 Carbohydrate-selective porin OprB K07267 oprB; porin
D Hden_1910 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Hden_0857 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB
D Hden_0251 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D Hden_1702 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D Hden_3290 Protein of unknown function DUF2159, secreted K03643 lptE; LPS-assembly lipoprotein
D Hden_3488 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D Hden_2430 amino acid permease-associated region K16238 eat; ethanolamine permease
D Hden_1064 ethanolamine transporter K16238 eat; ethanolamine permease
D Hden_0872 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Hden_0434 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Hden_2823 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Hden_1742 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Hden_0798 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_2032 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_0937 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Hden_0936 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Hden_2759 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Hden_0347 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Hden_2024 calcium/proton antiporter, CaCA family K07300 chaA; Ca2+:H+ antiporter
D Hden_0205 sodium/calcium exchanger membrane region K07300 chaA; Ca2+:H+ antiporter
D Hden_0409 Na+/solute symporter K14393 actP; cation/acetate symporter
D Hden_3516 putative solute symporter protein K14393 actP; cation/acetate symporter
D Hden_3245 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Hden_1621 sodium/hydrogen exchanger K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D Hden_0008 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter
D Hden_2555 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Hden_2860 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Hden_2612 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Hden_1279 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Hden_2341 arsenical-resistance protein K03325 ACR3; arsenite transporter
D Hden_2070 conserved hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Hden_3476 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Hden_2634 potassium transporter K03549 kup; KUP system potassium uptake protein
D Hden_1750 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D Hden_0373 protein of unknown function DUF125 transmembrane K22737 mbfA; erythrin-vacuolar iron transport family protein
D Hden_0059 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Hden_0242 cell cycle protein K03588 ftsW; cell division protein FtsW
D Hden_0199 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Hden_3540 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Hden_0575 Ferrous iron transport protein K07230 p19; periplasmic iron binding protein
D Hden_0280 TonB family protein K03832 tonB; periplasmic protein TonB
D Hden_0542 TonB family protein K03832 tonB; periplasmic protein TonB
D Hden_0748 TonB family protein K03832 tonB; periplasmic protein TonB
D Hden_2206 TonB family protein K03832 tonB; periplasmic protein TonB
D Hden_2420 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Hden_2419 OmpA/MotB domain protein K03640 pal; peptidoglycan-associated lipoprotein
D Hden_2424 protein TolA K03646 tolA; colicin import membrane protein
D Hden_1784 hypothetical protein K03646 tolA; colicin import membrane protein
D Hden_2423 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D Hden_1286 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Hden_1624 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Hden_0926 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Hden_0927 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Hden_0929 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Hden_2135 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Hden_2268 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Hden_0435 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Hden_2822 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Hden_1743 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Hden_1149 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D Hden_0799 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_2033 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_2718 efflux transporter, RND family, MFP subunit K19586 oqxA; membrane fusion protein, multidrug efflux system
D Hden_0938 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Hden_3443 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Hden_1354 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Hden_0454 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Hden_0284 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Hden_1382 lipopolysaccharide biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Hden_0830 TspO and MBR like protein K05770 TSPO; translocator protein
D Hden_1131 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D Hden_1506 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:hdn02044]
D Hden_1247 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Hden_2156 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Hden_2155 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Hden_2154 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F
D Hden_2153 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Hden_2152 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D Hden_2151 hypothetical protein K02458 gspI; general secretion pathway protein I
D Hden_2150 hypothetical protein K02459 gspJ; general secretion pathway protein J
D Hden_2149 hypothetical protein K02460 gspK; general secretion pathway protein K
D Hden_2148 Fimbrial assembly family protein K02461 gspL; general secretion pathway protein L
D Hden_2147 General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D Hden_2157 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Hden_0317 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Hden_0318 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Hden_0319 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Hden_0320 pilus (Caulobacter type) biogenesis lipoprotein CpaD K02281 cpaD; pilus assembly protein CpaD
D Hden_0321 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Hden_0322 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Hden_0323 Type II secretion system F domain protein K12510 tadB; tight adherence protein B
D Hden_0324 Type II secretion system F domain protein K12511 tadC; tight adherence protein C
D Hden_0315 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Hden_0316 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Hden_3209 protein of unknown function YGGT K02221 yggT; YggT family protein
D Hden_1902 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Hden_3056 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Hden_3106 type III secretion exporter K02401 flhB; flagellar biosynthesis protein FlhB
D Hden_3093 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Hden_3112 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Hden_3108 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Hden_2128 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Hden_3095 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Hden_3077 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Hden_3057 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D Hden_1887 outer membrane autotransporter barrel domain protein K12516 bigA; putative surface-exposed virulence protein
D Hden_0427 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D Hden_0426 conserved hypothetical protein K07347 fimD; outer membrane usher protein
D Hden_3430 hypothetical protein K04334 csgA; major curlin subunit
D Hden_3182 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Hden_3269 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Hden_1272 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Hden_1004 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Hden_1273 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Hden_1451 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Hden_1037 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Hden_3313 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Hden_3317 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Hden_1271 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Hden_3422 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Hden_1262 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Hden_1263 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Hden_1264 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hdn02042]
D Hden_1499 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Hden_3169 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hdn02022]
D Hden_0301 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Hden_0295 two component transcriptional regulator PhoB, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Hden_2499 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Hden_2498 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Hden_2934 osmosensitive K channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Hden_2935 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Hden_2300 integral membrane sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Hden_2299 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D Hden_3084 two component transcriptional regulator, winged helix family K21603 ftcR; two-component system, OmpR family, flagellar system response regulator FtcR
D Hden_1126 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Hden_1134 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Hden_3204 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Hden_0594 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Hden_2821 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Hden_0349 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Hden_2799 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Hden_0597 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Hden_0598 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Hden_1325 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_0815 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_1377 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Hden_0722 two component transcriptional regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D Hden_0814 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_1376 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_1307 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_1326 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Hden_1684 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Hden_1685 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Hden_1686 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Hden_1687 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Hden_3069 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Hden_3065 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3070 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_0867 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3066 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_0762 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_0763 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Hden_1862 integral membrane sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Hden_3519 histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Hden_0626 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D Hden_0625 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Hden_2127 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Hden_2486 two component transcriptional regulator, winged helix family K13584 ctrA; two-component system, cell cycle response regulator CtrA
D Hden_2647 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D Hden_0916 integral membrane sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Hden_0725 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Hden_0915 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Hden_0012 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Hden_0013 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D Hden_1420 response regulator receiver protein K19623 phcQ; two-component system, probable response regulator PhcQ
D Hden_1423 response regulator receiver protein K19623 phcQ; two-component system, probable response regulator PhcQ
D Hden_3123 histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D Hden_2948 nitrate transporter component, NrtA K22067 nasS; two-component system, oxyanion-binding sensor
D Hden_2947 response regulator receiver and ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:hdn02035]
D Hden_3069 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Hden_3068 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Hden_0603 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Hden_3071 hypothetical protein K03409 cheX; chemotaxis protein CheX
D Hden_3064 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Hden_3067 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Hden_3066 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_0762 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Hden_0763 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Hden_3065 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3070 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_0867 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Hden_3072 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0818 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0602 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Hden_2797 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Hden_0102 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Hden_3112 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Hden_2128 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Hden_3095 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Hden_3077 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Hden_3057 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D Hden_3056 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Hden_3106 type III secretion exporter K02401 flhB; flagellar biosynthesis protein FlhB
D Hden_3107 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Hden_3109 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D Hden_3108 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Hden_3093 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Hden_3099 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Hden_3100 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Hden_3097 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Hden_3096 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Hden_3102 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Hden_3104 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D Hden_3103 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Hden_3078 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Hden_3111 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Hden_3101 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Hden_3059 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Hden_3083 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Hden_3082 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Hden_3081 flagellar hook-associated 3 family protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Hden_3094 flagellin domain protein K02406 fliC; flagellin
D Hden_3110 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Hden_3091 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Hden_2453 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Hden_3090 hypothetical protein K10564 motC; chemotaxis protein MotC
D Hden_3089 flagellar hook-length control protein K10565 motD; chemotaxis protein MotD
D Hden_3080 flagellar FlaF family protein K06602 flaF; flagellar biosynthesis activator protein FlaF
D Hden_3079 flagellar FlbT family protein K06601 flbT; flagellar biosynthesis repressor protein FlbT
D Hden_2157 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Hden_0315 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Hden_0316 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Hden_0317 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Hden_0318 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Hden_0319 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Hden_0320 pilus (Caulobacter type) biogenesis lipoprotein CpaD K02281 cpaD; pilus assembly protein CpaD
D Hden_0321 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Hden_0322 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Hden_0427 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D Hden_0426 conserved hypothetical protein K07347 fimD; outer membrane usher protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hdn04812]
D Hden_3420 Clp domain protein K23612 WASL; neural Wiskott-Aldrich syndrome protein
D Hden_0249 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Hden_0248 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Hden_3036 AAA ATPase K03496 parA; chromosome partitioning protein
D Hden_3283 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Hden_2411 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Hden_1764 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Hden_3284 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hdn04147]
D Hden_2447 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Hden_1768 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Hden_2446 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Hden_1623 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Hden_2644 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Hden_2546 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Hden_3384 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Hden_2602 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Hden_0825 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Hden_1015 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Hden_0619 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Hden_1836 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Hden_0743 selenium-binding protein, putative K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D Hden_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2771 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Hden_2305 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Hden_1038 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Hden_2523 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Hden_0035 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Hden_3340 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Hden_3131 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Hden_0775 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_1424 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0975 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_2221 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0515 glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Hden_0953 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Hden_1481 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Hden_3460 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Hden_1300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0791 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0896 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_3225 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Hden_0197 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Hden_3414 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Hden_0537 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Hden_1448 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Hden_3325 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:hdn02048]
D Hden_1189 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Hden_2878 DNA methylase N-4/N-6 domain protein K13581 ccrM; modification methylase [EC:2.1.1.72]
D Hden_3015 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Hden_1542 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Hden_0122 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Hden_2987 HNH nuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Hden_0249 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Hden_1514 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Hden_2347 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Hden_1839 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_1903 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Hden_1653 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D Hden_2359 transcriptional regulator, Rrf2 family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:hdn04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hdn04090]
C 01504 Antimicrobial resistance genes [BR:hdn01504]
D Hden_3500 aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D Hden_0807 major facilitator superfamily MFS_1 K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D Hden_3520 protein of unknown function DUF470 K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Hden_0799 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_2033 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Hden_0798 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_2032 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Hden_1247 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Hden_2790 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Hden_1149 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hdn03100]
D Hden_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Hden_R0043 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Hden_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Hden_R0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Hden_R0016 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Hden_R0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Hden_R0017 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Hden_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Hden_R0008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Hden_R0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Hden_R0028 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Hden_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Hden_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Hden_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Hden_R0047 tRNA-His K14226 tRNA-His; tRNA His
D Hden_R0049 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Hden_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Hden_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Hden_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Hden_R0021 tRNA-Met K14230 tRNA-Met; tRNA Met
D Hden_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D Hden_R0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Hden_R0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Hden_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Hden_R0013 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Hden_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Hden_R0006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0007 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Hden_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Hden_R0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Hden_R0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Hden_R0012 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Hden_R0010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Hden_R0022 tRNA-Val K14237 tRNA-Val; tRNA Val
D Hden_R0036 tRNA-Val K14237 tRNA-Val; tRNA Val
D Hden_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Hden_R0048 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Hden_R0051 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Hden_R0052 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Hden_R0039 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Hden_R0003 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Hden_0472 hopanoid-associated sugar epimerase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D Hden_0784 Pyruvate dehydrogenase (acetyl-transferring) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D Hden_0785 Transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Hden_0979 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D Hden_1419 Aldehyde Dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D Hden_1486 coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D Hden_2871 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Hden_0649 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Hden_3262 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Hden_0730 NAD(P)H dehydrogenase (quinone) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Hden_2748 cytochrome c class I K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D Hden_1852 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Hden_0423 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Hden_0940 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Hden_0521 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Hden_0330 Glutathione S-transferase domain protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Hden_0650 Glutathione S-transferase domain protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Hden_2073 cytochrome B561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D Hden_0741 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Hden_0225 Di-heme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Hden_2364 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Hden_0731 Peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Hden_3403 peroxiredoxin, Ohr subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Hden_0084 conserved hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238]
D Hden_0083 ferredoxin K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238]
D Hden_0082 conserved hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238]
D Hden_0476 squalene-associated FAD-dependent desaturase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D Hden_0510 Oxidoreductase FAD-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Hden_2342 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Hden_3244 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Hden_2340 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Hden_1484 coenzyme PQQ biosynthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D Hden_0551 coenzyme PQQ biosynthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D Hden_1246 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Hden_1405 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Hden_2283 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Hden_0599 Radical SAM domain protein K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D Hden_3439 Beta-ketoacyl-acyl-carrier-protein synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D Hden_3489 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Hden_3484 phospholipid/glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D Hden_1695 GCN5-related N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D Hden_1396 GCN5-related N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D Hden_1834 Beta-ketoacyl synthase K14660 nodE; nodulation protein E [EC:2.3.1.-]
D Hden_1835 phosphopantetheine-binding protein K14661 nodF; nodulation protein F [EC:2.3.1.-]
D Hden_0836 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Hden_1516 Arginine-tRNA-protein transferase domain protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D Hden_3473 conserved hypothetical protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D Hden_0475 squalene synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103]
D Hden_2504 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Hden_1877 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Hden_3274 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Hden_1136 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Hden_1966 alpha/beta hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Hden_2921 putative esterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Hden_2159 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Hden_2160 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Hden_1941 thioesterase superfamily protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Hden_2213 thioesterase superfamily protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Hden_2433 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Hden_0456 Protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Hden_1444 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Hden_1728 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Hden_3113 glycoside hydrolase family 24 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D Hden_0054 Serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D Hden_0614 Serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D Hden_0069 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Hden_2724 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Hden_2233 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Hden_2402 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Hden_2387 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Hden_1798 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Hden_3190 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Hden_2377 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Hden_2097 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Hden_2678 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Hden_2219 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Hden_0474 squalene synthase HpnC K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D Hden_2044 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D Hden_0941 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D Hden_2467 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Hden_0076 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D Hden_3159 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D Hden_0584 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D Hden_0580 cytochrome c oxidase subunit III K02164 norE; nitric oxide reductase NorE protein
D Hden_0583 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
D Hden_3413 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D Hden_1660 acyl-CoA dehydrogenase domain protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Hden_3294 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Hden_1350 O-antigen polymerase K16567 exoQ; exopolysaccharide production protein ExoQ
D Hden_0181 glycosyl transferase family 25 K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D Hden_2700 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D Hden_3447 HemY domain protein K02498 hemY; HemY protein
D Hden_3543 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Hden_0566 putative lipid carrier protein-like protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D Hden_2751 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D Hden_1677 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D Hden_3046 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein
D Hden_0403 DoxX family protein K15977 K15977; putative oxidoreductase
D Hden_3047 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Hden_1051 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Hden_0364 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Hden_0862 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Hden_2375 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Hden_3307 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D Hden_2622 beta-lactamase domain protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D Hden_0213 protein of unknown function DUF306 Meta and HslJ K03668 hslJ; heat shock protein HslJ
D Hden_0616 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Hden_1959 trigger factor K03545 tig; trigger factor
D Hden_2812 UreE urease accessory domain protein K03187 ureE; urease accessory protein
D Hden_2811 Urease accessory protein UreF K03188 ureF; urease accessory protein
D Hden_2808 urease accessory protein UreG K03189 ureG; urease accessory protein
D Hden_2807 Urease accessory protein UreD K03190 ureD; urease accessory protein
D Hden_2806 HupE/UreJ protein K03192 ureJ; urease accessory protein
D Hden_2251 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Hden_3212 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Hden_3132 20S proteasome A and B subunits K07395 K07395; putative proteasome-type protease
C 99976 Replication and repair
D Hden_2173 Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Hden_3373 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Hden_3399 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Hden_2291 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Hden_0288 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Hden_0948 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Hden_2331 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Hden_0633 DNA protecting protein DprA K04096 smf; DNA processing protein
D Hden_1493 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Hden_1738 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase
D Hden_0707 transposase mutator type K07493 K07493; putative transposase
D Hden_0714 transposase mutator type K07493 K07493; putative transposase
D Hden_0431 transposase mutator type K07493 K07493; putative transposase
C 99979 Viral proteins
C 99998 Others
D Hden_2728 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Hden_2293 formate/nitrite transporter K21990 yfdC; formate-nitrite transporter family protein
D Hden_2089 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Hden_1297 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Hden_2113 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Hden_0362 major facilitator transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D Hden_3175 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D Hden_0819 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Hden_0945 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D Hden_3319 intracellular septation protein A K06190 ispZ; intracellular septation protein
D Hden_3318 Intracellular septation protein A K06190 ispZ; intracellular septation protein
D Hden_3032 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase
D Hden_3410 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Hden_2332 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Hden_3332 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Hden_3486 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Hden_0797 short-chain dehydrogenase/reductase SDR K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein
C 99992 Structural proteins
D Hden_0484 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Hden_2743 AsmA family protein K07289 asmA; AsmA protein
D Hden_1963 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D Hden_2917 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D Hden_2914 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Hden_1130 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Hden_1129 cytochrome c-type biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D Hden_1132 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D Hden_0296 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Hden_1002 periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D Hden_1640 periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D Hden_1089 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Hden_0024 ApaG domain protein K06195 apaG; ApaG protein
D Hden_1881 periplasmic copper-binding protein K07218 nosD; nitrous oxidase accessory protein
D Hden_0600 protein of unknown function DUF1008 K07227 chuX; heme iron utilization protein
D Hden_0876 protein of unknown function DUF1008 K07227 chuX; heme iron utilization protein
D Hden_0303 Peptidase M75, Imelysin K07231 K07231; putative iron-regulated protein
D Hden_0676 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D Hden_2274 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D Hden_0546 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D Hden_0677 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D Hden_0590 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D Hden_1878 NosL family protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Hden_1723 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Hden_0553 coenzyme PQQ biosynthesis protein A K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D Hden_1487 coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D Hden_1485 coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D Hden_0552 coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D Hden_0733 globin K06886 glbN; hemoglobin
D Hden_0998 truncated hemoglobin-like protein K06886 glbN; hemoglobin
D Hden_0086 globin K06886 glbN; hemoglobin
D Hden_2068 Patatin K07001 K07001; NTE family protein
D Hden_2716 Patatin K07001 K07001; NTE family protein
D Hden_1788 Patatin K07001 K07001; NTE family protein
D Hden_2550 cyclic nucleotide-binding protein K07001 K07001; NTE family protein
D Hden_0802 Patatin K07001 K07001; NTE family protein
D Hden_2592 Patatin K07001 K07001; NTE family protein
D Hden_2396 Patatin K07001 K07001; NTE family protein
D Hden_0899 Patatin K07001 K07001; NTE family protein
D Hden_3418 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D Hden_2358 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Hden_2355 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Hden_0215 ribonuclease BN K07058 K07058; membrane protein
D Hden_3268 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D Hden_1096 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D Hden_2706 Rhodanese domain protein K07146 K07146; UPF0176 protein
D Hden_3137 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Hden_2343 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D Hden_3464 LemA family protein K03744 lemA; LemA protein
D Hden_2116 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D Hden_3462 protein of unknown function DUF477 K08988 K08988; putative membrane protein
D Hden_1642 conserved hypothetical protein K08990 ycjF; putative membrane protein
D Hden_2371 conserved hypothetical protein K08995 K08995; putative membrane protein
D Hden_2194 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D Hden_3463 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Hden_3279 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Hden_2627 conserved hypothetical protein K06889 K06889; uncharacterized protein
D Hden_0232 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D Hden_1337 hypothetical protein K06889 K06889; uncharacterized protein
D Hden_3257 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein
D Hden_1478 protein of unknown function DUF201 K06913 K06913; uncharacterized protein
D Hden_1643 protein of unknown function DUF463 YcjX family protein K06918 K06918; uncharacterized protein
D Hden_1270 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Hden_1394 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Hden_2183 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Hden_0415 metallophosphoesterase K06953 K06953; uncharacterized protein
D Hden_0429 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Hden_0195 protein of unknown function DUF861 cupin_3 K06995 K06995; uncharacterized protein
D Hden_0087 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D Hden_0481 hopanoid biosynthesis associated RND transporter like protein HpnN K07003 K07003; uncharacterized protein
D Hden_1850 putative membrane transporter K07003 K07003; uncharacterized protein
D Hden_2937 conserved hypothetical protein K07005 K07005; uncharacterized protein
D Hden_2414 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07006 K07006; uncharacterized protein
D Hden_3174 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07006 K07006; uncharacterized protein
D Hden_2360 peptidase S15 K07018 K07018; uncharacterized protein
D Hden_0421 conserved hypothetical protein K07020 K07020; uncharacterized protein
D Hden_0094 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein
D Hden_1393 Glyoxalase/bleomycin resistance protein/dioxygenase K07032 K07032; uncharacterized protein
D Hden_1646 protein of unknown function zinc metallopeptidase putative K07054 K07054; uncharacterized protein
D Hden_0720 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Hden_1045 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Hden_0413 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Hden_1866 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Hden_0688 conserved hypothetical protein K07092 K07092; uncharacterized protein
D Hden_1849 conserved hypothetical protein K07092 K07092; uncharacterized protein
D Hden_0093 protein of unknown function DUF839 K07093 K07093; uncharacterized protein
D Hden_2434 metallophosphoesterase K07098 K07098; uncharacterized protein
D Hden_0681 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Hden_0699 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Hden_0332 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Hden_0333 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Hden_0829 nuclear protein SET K07117 K07117; uncharacterized protein
D Hden_2795 nuclear protein SET K07117 K07117; uncharacterized protein
D Hden_0828 nuclear protein SET K07117 K07117; uncharacterized protein
D Hden_3440 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Hden_0652 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Hden_2450 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Hden_3470 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein
D Hden_1783 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Hden_1052 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Hden_1818 hypothetical protein K09117 K09117; uncharacterized protein
D Hden_3210 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Hden_1833 protein of unknown function DUF369 K09143 K09143; uncharacterized protein
D Hden_1469 protein of unknown function DUF447 K09154 K09154; uncharacterized protein
D Hden_1104 protein of unknown function UPF0153 K09160 K09160; uncharacterized protein
D Hden_2768 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D Hden_1830 protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D Hden_3471 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Hden_2042 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Hden_2655 protein of unknown function DUF459 K09795 K09795; uncharacterized protein
D Hden_1827 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Hden_2708 protein of unknown function DUF329 K09862 K09862; uncharacterized protein
D Hden_0620 protein of unknown function DUF482 K09919 K09919; uncharacterized protein
D Hden_1662 protein of unknown function DUF486 K09922 K09922; uncharacterized protein
D Hden_1846 Protein of unknown function DUF2059 K09924 K09924; uncharacterized protein
D Hden_2245 Protein of unknown function DUF2062 K09928 K09928; uncharacterized protein
D Hden_0273 Protein of unknown function DUF2065 K09937 K09937; uncharacterized protein
D Hden_2140 putative periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein
D Hden_0307 conserved hypothetical protein K09947 K09947; uncharacterized protein
D Hden_2641 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D Hden_2680 conserved hypothetical protein K09950 K09950; uncharacterized protein
D Hden_3541 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
D Hden_2313 protein of unknown function DUF779 K09959 K09959; uncharacterized protein
D Hden_2314 protein of unknown function DUF779 K09959 K09959; uncharacterized protein
D Hden_2597 Protein of unknown function DUF2239 K09965 K09965; uncharacterized protein
D Hden_3224 GumN family protein K09973 K09973; uncharacterized protein
D Hden_1311 GumN family protein K09973 K09973; uncharacterized protein
D Hden_1953 Domain of unknown function DUF1993 K09983 K09983; uncharacterized protein
D Hden_0266 protein of unknown function DUF1321 K09985 K09985; uncharacterized protein
D Hden_2376 protein of unknown function DUF1285 K09986 K09986; uncharacterized protein
D Hden_2611 protein of unknown function DUF1013 K09987 K09987; uncharacterized protein
D Hden_1637 conserved hypothetical protein K09989 K09989; uncharacterized protein
D Hden_0820 Phosphate transport regulator-like protein K07220 K07220; uncharacterized protein
D Hden_1809 protein of unknown function DUF1022 K07276 K07276; uncharacterized protein
D Hden_0306 Peptidase M75, Imelysin K07338 K07338; uncharacterized protein
D Hden_3495 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024