+D GENES KO
#
KEGG Orthology (KO) - Candidatus Hydrogenosomobacter endosymbioticus
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hec00010]
D HYD_5710 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HYD_6660 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HYD_0570 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HYD_6000 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HYD_4500 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00020 Citrate cycle (TCA cycle) [PATH:hec00020]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HYD_0570 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HYD_6000 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HYD_4500 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hec00030]
D HYD_5710 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HYD_5690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HYD_0210 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HYD_2310 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HYD_0180 hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
C 00040 Pentose and glucuronate interconversions
D HYD_5690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:hec00051]
D HYD_0200 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HYD_6660 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HYD_2310 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:hec00500]
D HYD_3540 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D HYD_0700 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D HYD_5710 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hec00520]
D HYD_0170 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HYD_2180 nodM; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HYD_6720 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HYD_0350 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HYD_2140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HYD_1110 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HYD_5840 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D HYD_5710 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HYD_0200 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HYD_3540 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D HYD_3530 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
C 00620 Pyruvate metabolism [PATH:hec00620]
D HYD_0570 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HYD_6000 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HYD_4500 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HYD_4670 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HYD_4040 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HYD_3030 accB; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HYD_3800 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hec00630]
D HYD_5970 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:hec00640]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HYD_4670 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HYD_4040 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HYD_3030 accB; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HYD_3800 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
C 00650 Butanoate metabolism
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:hec00562]
D HYD_5590 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HYD_6660 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hec00190]
D HYD_2580 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HYD_2560 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HYD_2570 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HYD_2590 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HYD_1460 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HYD_1480 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HYD_1490 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HYD_1470 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism
D HYD_3000 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hec00061]
D HYD_4670 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HYD_4040 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HYD_3030 accB; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HYD_3800 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HYD_2190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HYD_3860 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HYD_3880 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HYD_2200 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HYD_1650 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HYD_3700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HYD_5200 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] 1 K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HYD_0310 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hec00561]
D HYD_6930 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HYD_7000 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HYD_5600 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:hec00564]
D HYD_2250 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HYD_7000 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HYD_5600 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HYD_6710 hypothetical protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D HYD_1780 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HYD_2680 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HYD_6490 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hec00230]
D HYD_0180 hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HYD_5170 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HYD_1380 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HYD_6480 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HYD_6450 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HYD_1850 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HYD_7020 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D HYD_1360 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:hec00240]
D HYD_1840 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HYD_6480 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HYD_3390 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HYD_5790 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HYD_1850 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HYD_2220 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HYD_4990 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HYD_1020 tdk_1; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HYD_4330 tdk_2; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hec00250]
D HYD_6960 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HYD_2180 nodM; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:hec00260]
D HYD_3360 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HYD_0670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HYD_3000 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HYD_1780 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:hec00270]
D HYD_1380 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HYD_3360 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HYD_0670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HYD_3000 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hec00280]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:hec00300]
D HYD_3360 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HYD_0670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HYD_1080 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HYD_1950 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HYD_5680 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HYD_3090 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HYD_7080 hypothetical protein K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HYD_2060 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HYD_4440 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
D HYD_6960 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
D HYD_0250 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D HYD_4970 hypothetical protein K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
D HYD_2770 metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:hec00450]
D HYD_0140 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HYD_3430 ferredoxin--NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HYD_0080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
C 00470 D-Amino acid metabolism [PATH:hec00470]
D HYD_5360 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D HYD_3380 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HYD_4960 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HYD_7080 hypothetical protein K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:hec00480]
D HYD_5930 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HYD_4130 Gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:hec00540]
D HYD_6290 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HYD_4980 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HYD_3770 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HYD_3550 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HYD_1640 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HYD_1390 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HYD_5240 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HYD_5080 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HYD_4650 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HYD_6880 kdtA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HYD_0070 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hec00541]
D HYD_3540 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D HYD_3530 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D HYD_0200 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HYD_0350 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HYD_5840 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:hec00550]
D HYD_2140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HYD_1110 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HYD_1120 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HYD_4960 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HYD_2060 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HYD_3380 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HYD_4440 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HYD_5220 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HYD_3950 uppP3; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HYD_4270 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HYD_4790 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HYD_2810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HYD_2380 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HYD_3450 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HYD_5660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:hec00552]
D HYD_3950 uppP3; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hec00730]
D HYD_5030 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HYD_6390 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HYD_5010 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HYD_4010 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HYD_3790 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HYD_1360 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
D HYD_5010 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism
D HYD_3000 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00760 Nicotinate and nicotinamide metabolism
D HYD_1420 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HYD_1430 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HYD_1410 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:hec00770]
D HYD_4970 hypothetical protein K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HYD_0590 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:hec00780]
D HYD_2200 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HYD_1650 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HYD_3700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HYD_5200 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] 1 K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HYD_5830 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hec00785]
D HYD_0940 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D HYD_2880 lipA1; lipoyl synthase 1 K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HYD_0570 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HYD_6000 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HYD_4500 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis
C 00670 One carbon pool by folate
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D HYD_4170 gltX2_1; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_6320 gltX2_2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
D HYD_5220 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:hec00261]
D HYD_3360 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HYD_0670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HYD_1080 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HYD_1950 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D HYD_5590 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D HYD_3860 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HYD_1650 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HYD_5200 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] 1 K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HYD_2190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hec03020]
D HYD_6830 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HYD_6840 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HYD_3610 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HYD_6860 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hec03010]
D HYD_0970 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HYD_0060 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HYD_0790 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HYD_6470 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HYD_1320 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HYD_0340 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HYD_1290 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HYD_0830 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HYD_7120 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HYD_3620 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HYD_0820 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HYD_3630 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HYD_1280 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HYD_3840 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HYD_3260 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HYD_0770 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HYD_7210 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HYD_5420 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HYD_6800 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HYD_0760 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HYD_0730 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HYD_0740 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HYD_1270 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HYD_1300 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HYD_6820 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HYD_2470 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HYD_6810 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HYD_6790 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HYD_0840 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HYD_2660 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HYD_1340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HYD_0800 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HYD_3600 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HYD_1310 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HYD_2790 hypothetical protein K02884 RP-L19; large subunit ribosomal protein L19
D HYD_5630 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HYD_0910 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HYD_0780 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HYD_0750 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HYD_2650 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HYD_4950 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HYD_0900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HYD_2710 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HYD_0810 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29
D HYD_1330 hypothetical protein K02907 RP-L30; large subunit ribosomal protein L30
D HYD_1030 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HYD_6940 hypothetical protein K02911 RP-L32; large subunit ribosomal protein L32
D HYD_6440 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HYD_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hec00970]
D HYD_t0230 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HYD_t0180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HYD_t0320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HYD_t0150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0050 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HYD_t0120 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HYD_t0260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HYD_t0430 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HYD_t0160 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HYD_t0450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HYD_t0270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HYD_t0420 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HYD_t0170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HYD_t0190 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HYD_t0310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HYD_t0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HYD_t0130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HYD_t0390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HYD_t0100 tRNA-Met K14230 tRNA-Met; tRNA Met
D HYD_t0110 tRNA-Met K14230 tRNA-Met; tRNA Met
D HYD_t0080 tRNA-Met K14230 tRNA-Met; tRNA Met
D HYD_t0010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HYD_t0350 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HYD_t0250 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HYD_t0410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HYD_t0200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0380 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0340 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HYD_t0210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HYD_t0280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HYD_t0370 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HYD_t0070 tRNA-Val K14237 tRNA-Val; tRNA Val
D HYD_4170 gltX2_1; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_6320 gltX2_2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_4410 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HYD_6330 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HYD_4420 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HYD_3160 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HYD_2440 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HYD_1990 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HYD_1980 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HYD_3890 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HYD_0990 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HYD_4280 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HYD_0080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HYD_3140 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HYD_5520 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HYD_0390 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HYD_4760 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D HYD_2990 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HYD_7060 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HYD_1740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HYD_0370 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HYD_1440 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HYD_0120 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HYD_1070 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hec03060]
D HYD_1350 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HYD_6770 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D HYD_5780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HYD_2620 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HYD_2630 hypothetical protein K03074 secF; preprotein translocase subunit SecF
D HYD_1010 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D HYD_4870 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HYD_0660 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HYD_2500 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HYD_2850 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HYD_3280 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HYD_0600 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HYD_5730 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hec04122]
D HYD_6390 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HYD_2600 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:hec03018]
D HYD_4660 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HYD_3830 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HYD_2720 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HYD_0870 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HYD_3150 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HYD_2920 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HYD_5980 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HYD_6360 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hec03030]
D HYD_6900 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HYD_1610 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HYD_6980 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HYD_5100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HYD_5670 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HYD_3500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HYD_4360 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HYD_5250 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HYD_1540 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D HYD_3210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HYD_1710 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HYD_1160 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HYD_3570 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hec03410]
D HYD_5910 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HYD_2050 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HYD_4520 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HYD_5130 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HYD_3570 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hec03420]
D HYD_7040 hypothetical protein K03701 uvrA; excinuclease ABC subunit A
D HYD_6300 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D HYD_4390 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D HYD_5500 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HYD_3570 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hec03430]
D HYD_6700 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HYD_5070 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HYD_5500 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HYD_4730 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HYD_4570 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HYD_5130 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HYD_3210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HYD_1610 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HYD_4360 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HYD_6980 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HYD_5670 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HYD_5100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HYD_6900 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HYD_3500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HYD_3570 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:hec03440]
D HYD_5130 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HYD_3210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HYD_1900 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HYD_5000 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HYD_4100 recA; protein RecA K03553 recA; recombination protein RecA
D HYD_1720 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HYD_1730 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HYD_1210 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HYD_4150 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HYD_1610 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HYD_4360 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HYD_6980 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HYD_5670 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HYD_5100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HYD_6900 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HYD_3500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hec02010]
D HYD_4750 putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D HYD_6100 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D HYD_6670 polyamine-transporting ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D HYD_1760 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D HYD_1130 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HYD_5350 putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HYD_2160 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HYD_6020 ABC transporter permease K13894 yejB; microcin C transport system permease protein
D HYD_6030 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D HYD_6040 yejF; ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D HYD_2020 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein
D HYD_0040 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HYD_6630 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D HYD_3290 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HYD_7170 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:hec03070]
D HYD_2370 type I secretion protein TolC K12340 tolC; outer membrane protein
D HYD_4900 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D HYD_5440 hofC; type IV pilin biogenesis protein K02455 gspF; general secretion pathway protein F
D HYD_5430 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HYD_2620 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HYD_2630 hypothetical protein K03074 secF; preprotein translocase subunit SecF
D HYD_6770 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D HYD_5780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HYD_1350 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HYD_1010 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D HYD_4870 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HYD_0660 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HYD_3280 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HYD_2500 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HYD_2850 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hec02020]
D HYD_6550 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HYD_4810 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HYD_5060 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D HYD_0010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HYD_5540 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D HYD_5040 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D HYD_6370 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D HYD_4460 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D HYD_5140 ctrA; DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D HYD_2370 type I secretion protein TolC K12340 tolC; outer membrane protein
D HYD_4830 hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hec02024]
D HYD_5980 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HYD_4850 ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HYD_4870 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HYD_6770 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D HYD_5780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HYD_1350 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HYD_1010 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D HYD_0660 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HYD_3280 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HYD_2500 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HYD_2850 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D HYD_4920 hypothetical protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hec02040]
D HYD_4920 hypothetical protein K02557 motB; chemotaxis protein MotB
D HYD_1530 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hec01501]
D HYD_0130 integral membrane signal transducer protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HYD_0170 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HYD_3910 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HYD_3900 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D HYD_2370 type I secretion protein TolC K12340 tolC; outer membrane protein
D HYD_2810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HYD_3450 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hec01502]
D HYD_3380 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HYD_5360 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D HYD_4440 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HYD_4270 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HYD_4790 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hec01503]
D HYD_5060 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D HYD_3910 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HYD_3900 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D HYD_2370 type I secretion protein TolC K12340 tolC; outer membrane protein
D HYD_6290 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hec01000]
C 01001 Protein kinases [BR:hec01001]
D HYD_6550 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HYD_5540 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D HYD_6370 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins
C 01002 Peptidases and inhibitors [BR:hec01002]
D HYD_5730 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HYD_3970 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D HYD_2180 nodM; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HYD_5930 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HYD_3090 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HYD_4550 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HYD_6460 aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HYD_3100 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HYD_4690 putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HYD_5060 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D HYD_5660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HYD_4300 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HYD_2950 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HYD_0600 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HYD_1180 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HYD_6420 tri1; tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-]
D HYD_5190 sppA; protease K04773 sppA; protease IV [EC:3.4.21.-]
D HYD_0440 gp35; primosomal replication protein N K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D HYD_5810 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D HYD_1620 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:hec01003]
D HYD_2380 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HYD_2810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hec01005]
D HYD_6290 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HYD_1640 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HYD_4980 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HYD_3770 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HYD_3550 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HYD_1390 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HYD_0070 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HYD_6880 kdtA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HYD_5080 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HYD_4650 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HYD_5240 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HYD_7160 glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hec01011]
D HYD_2140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HYD_1110 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HYD_1120 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HYD_4960 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HYD_2060 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HYD_3380 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HYD_5360 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D HYD_4270 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HYD_4790 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HYD_3950 uppP3; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HYD_0890 putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HYD_2810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HYD_2380 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HYD_3450 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HYD_5660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HYD_0050 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HYD_1520 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HYD_2230 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:hec01004]
D HYD_3860 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HYD_3880 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HYD_2200 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HYD_1650 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HYD_3700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HYD_5200 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] 1 K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HYD_0310 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HYD_6930 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HYD_7000 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HYD_5600 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:hec01006]
D HYD_5220 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HYD_0950 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:hec01007]
D HYD_4760 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D HYD_4170 gltX2_1; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_6320 gltX2_2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_0120 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HYD_1070 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HYD_4280 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HYD_2990 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HYD_0080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HYD_0390 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HYD_3140 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HYD_5520 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HYD_2440 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HYD_1740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HYD_1990 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HYD_1980 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HYD_0990 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HYD_7060 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HYD_3890 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HYD_3160 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HYD_0370 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HYD_1440 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HYD_3000 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hec00194]
D HYD_2560 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HYD_2570 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HYD_2580 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HYD_2590 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HYD_1480 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HYD_1490 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HYD_1470 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HYD_1460 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hec03000]
D HYD_5830 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HYD_3680 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HYD_5280 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HYD_2280 UPF0301 protein K07735 algH; putative transcriptional regulator
D HYD_1680 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D HYD_3730 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hec03021]
D HYD_3610 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HYD_6830 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HYD_6840 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HYD_6860 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HYD_1530 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HYD_4060 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HYD_1870 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D HYD_6780 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HYD_1680 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D HYD_0380 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D HYD_2720 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hec03019]
D HYD_4660 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HYD_0610 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HYD_0870 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HYD_3830 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HYD_2720 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HYD_3150 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HYD_2920 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HYD_5980 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HYD_6360 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HYD_3470 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:hec03011]
D HYD_0970 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HYD_0060 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HYD_0790 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HYD_6470 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HYD_1320 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HYD_0340 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HYD_1290 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HYD_0830 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HYD_7120 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HYD_3620 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HYD_0820 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HYD_3630 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HYD_1280 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HYD_3840 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HYD_3260 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HYD_0770 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HYD_7210 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HYD_5420 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HYD_6800 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HYD_0760 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HYD_0730 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HYD_0740 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HYD_1270 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HYD_1300 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HYD_2470 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HYD_6810 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HYD_6790 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HYD_6820 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HYD_0840 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HYD_2660 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HYD_1340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HYD_0800 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HYD_3600 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HYD_1310 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HYD_2790 hypothetical protein K02884 RP-L19; large subunit ribosomal protein L19
D HYD_5630 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HYD_0910 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HYD_0780 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HYD_0750 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HYD_2650 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HYD_0900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HYD_2710 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HYD_0810 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29
D HYD_1330 hypothetical protein K02907 RP-L30; large subunit ribosomal protein L30
D HYD_1030 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HYD_6940 hypothetical protein K02911 RP-L32; large subunit ribosomal protein L32
D HYD_6440 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HYD_4950 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HYD_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hec03009]
D HYD_0610 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HYD_2820 era; GTPase Era K03595 era; GTPase
D HYD_4820 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D HYD_1680 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D HYD_4060 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HYD_1870 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D HYD_6780 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HYD_3420 RNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HYD_6050 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HYD_3720 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HYD_0280 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HYD_1450 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D HYD_3980 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HYD_6650 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HYD_3020 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HYD_1560 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HYD_4660 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HYD_4320 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HYD_2240 der; GTPase Der K03977 engA; GTPase
D HYD_5620 hflX; GTPase HflX K03665 hflX; GTPase
D HYD_4590 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HYD_5820 hypothetical protein K02834 rbfA; ribosome-binding factor A
D HYD_4070 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D HYD_7190 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D HYD_7010 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:hec03016]
D HYD_4170 gltX2_1; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_6320 gltX2_2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_7060 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HYD_0390 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HYD_5520 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HYD_0080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HYD_2990 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HYD_2440 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HYD_3160 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HYD_3890 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HYD_0990 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HYD_4280 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HYD_3140 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HYD_1740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HYD_0370 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HYD_1440 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HYD_0120 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HYD_1070 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HYD_4780 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HYD_3850 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HYD_6390 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HYD_4590 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HYD_0950 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HYD_4890 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HYD_3250 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HYD_1910 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HYD_4760 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D HYD_1990 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HYD_1980 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HYD_2780 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HYD_5550 dus; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HYD_1580 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HYD_0100 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D HYD_3750 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HYD_1090 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HYD_2600 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HYD_3270 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D HYD_2800 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HYD_4430 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HYD_2890 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HYD_3830 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hec03012]
D HYD_4050 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HYD_3650 hypothetical protein K02520 infC; translation initiation factor IF-3
D HYD_1830 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HYD_7110 tuf2; elongation factor Tu 2 K02358 tuf; elongation factor Tu
D HYD_3060 fusA; elongation factor G K02355 fusA; elongation factor G
D HYD_4250 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HYD_4910 ribosome-recycling factor K02838 frr; ribosome recycling factor
D HYD_1140 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HYD_5270 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HYD_3590 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HYD_3190 efp; elongation factor P K02356 efp; elongation factor P
D HYD_2360 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:hec03110]
D HYD_0620 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HYD_6850 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HYD_4030 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D HYD_3150 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HYD_2920 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HYD_2270 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HYD_5290 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D HYD_2930 groES1; 10 kDa chaperonin K04078 groES; chaperonin GroES
D HYD_5060 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D HYD_3100 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HYD_1460 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HYD_2500 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HYD_5340 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D HYD_4580 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D HYD_6640 hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D HYD_1370 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:hec04131]
D HYD_6480 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:hec03032]
D HYD_1710 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HYD_6240 hup; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HYD_0580 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HYD_2150 hypothetical protein K05788 ihfB; integration host factor subunit beta
D HYD_0010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HYD_5250 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HYD_1540 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D HYD_3210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HYD_1610 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HYD_4360 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HYD_3500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HYD_5670 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HYD_5100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HYD_6900 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HYD_6980 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HYD_1160 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HYD_3570 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HYD_3200 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HYD_6890 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HYD_2530 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hec03036]
D HYD_0610 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HYD_6240 hup; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HYD_0580 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HYD_2150 hypothetical protein K05788 ihfB; integration host factor subunit beta
D HYD_0010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HYD_3010 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D HYD_5980 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HYD_1700 hypothetical protein K03590 ftsA; cell division protein FtsA
D HYD_3450 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HYD_1630 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D HYD_2320 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HYD_1690 hypothetical protein K03531 ftsZ; cell division protein FtsZ
D HYD_3910 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HYD_5650 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HYD_5860 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D HYD_3680 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HYD_5750 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HYD_0270 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
C 03400 DNA repair and recombination proteins [BR:hec03400]
D HYD_5160 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HYD_5910 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HYD_4990 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HYD_2050 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HYD_4520 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HYD_5130 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HYD_3570 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HYD_7040 hypothetical protein K03701 uvrA; excinuclease ABC subunit A
D HYD_6300 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D HYD_4390 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D HYD_5500 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HYD_6830 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HYD_6840 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HYD_3610 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HYD_6860 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HYD_6700 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HYD_5070 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HYD_4730 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HYD_4570 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HYD_1610 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HYD_4360 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HYD_3500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HYD_5670 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HYD_5100 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HYD_6900 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HYD_6980 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HYD_3210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HYD_4100 recA; protein RecA K03553 recA; recombination protein RecA
D HYD_1720 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HYD_1730 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HYD_1210 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HYD_4610 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HYD_1900 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HYD_4150 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HYD_5000 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HYD_0030 DNA helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D HYD_3200 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HYD_6890 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HYD_2530 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HYD_6240 hup; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HYD_0580 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D HYD_2150 hypothetical protein K05788 ihfB; integration host factor subunit beta
C 03029 Mitochondrial biogenesis [BR:hec03029]
D HYD_4050 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HYD_3650 hypothetical protein K02520 infC; translation initiation factor IF-3
D HYD_1830 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HYD_7110 tuf2; elongation factor Tu 2 K02358 tuf; elongation factor Tu
D HYD_3060 fusA; elongation factor G K02355 fusA; elongation factor G
D HYD_2820 era; GTPase Era K03595 era; GTPase
D HYD_0120 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HYD_5520 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HYD_2440 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HYD_2990 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HYD_4410 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HYD_6330 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HYD_4420 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HYD_3210 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HYD_2450 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D HYD_3150 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HYD_5290 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D HYD_2920 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HYD_2930 groES1; 10 kDa chaperonin K04078 groES; chaperonin GroES
D HYD_2270 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HYD_6390 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HYD_4870 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hec02000]
D HYD_7170 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HYD_5760 abcT3; ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HYD_4750 putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D HYD_6100 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D HYD_6670 polyamine-transporting ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D HYD_1130 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HYD_5350 putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HYD_2160 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HYD_1760 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D HYD_6070 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HYD_6080 yqiY; arginine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D HYD_0090 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HYD_4850 ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HYD_6020 ABC transporter permease K13894 yejB; microcin C transport system permease protein
D HYD_6030 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D HYD_6040 yejF; ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D HYD_6630 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D HYD_3290 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HYD_2020 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein
D HYD_0040 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HYD_6910 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D HYD_7090 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HYD_3350 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D HYD_0130 integral membrane signal transducer protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HYD_4130 Gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HYD_1170 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel
D HYD_0220 magnesium transporter MgtE K06213 mgtE; magnesium transporter
D HYD_4920 hypothetical protein K02557 motB; chemotaxis protein MotB
D HYD_1220 hypothetical protein K03562 tolQ; biopolymer transport protein TolQ
D HYD_1230 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D HYD_0240 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HYD_0150 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D HYD_2370 type I secretion protein TolC K12340 tolC; outer membrane protein
D HYD_2450 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D HYD_4210 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D HYD_0920 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D HYD_5610 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D HYD_5320 hypothetical protein K04744 lptD; LPS-assembly protein
D HYD_7180 hypothetical protein K06189 corC; hemolysin (HlyC) family protein
D HYD_3900 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D HYD_0500 sam; S-adenosylmethionine uptake transporter K15270 sam; S-adenosylmethionine uptake transporter
D HYD_3410 Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D HYD_4930 trkA; Trk system potassium transport protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D HYD_0890 putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HYD_4540 UPF0056 inner membrane protein K05595 marC; multiple antibiotic resistance protein
D HYD_2320 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HYD_4240 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D HYD_7130 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D HYD_3940 tolB; protein TolB K03641 tolB; TolB protein
D HYD_6560 hppA; K(+)-insensitive pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D HYD_3910 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
C 02044 Secretion system [BR:hec02044]
D HYD_2370 type I secretion protein TolC K12340 tolC; outer membrane protein
D HYD_4900 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D HYD_5430 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HYD_5440 hofC; type IV pilin biogenesis protein K02455 gspF; general secretion pathway protein F
D HYD_0660 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HYD_2500 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HYD_2620 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HYD_6770 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D HYD_2630 hypothetical protein K03074 secF; preprotein translocase subunit SecF
D HYD_5780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HYD_1350 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HYD_2850 hypothetical protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HYD_3280 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HYD_1010 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D HYD_4870 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:hec02042]
D HYD_0240 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hec02022]
D HYD_6550 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HYD_4810 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HYD_5540 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D HYD_5040 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D HYD_6370 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D HYD_5140 ctrA; DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
C 02035 Bacterial motility proteins [BR:hec02035]
D HYD_4920 hypothetical protein K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hec04812]
D HYD_7100 hypothetical protein K06990 MEMO1; MEMO1 family protein
D HYD_5650 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HYD_1690 hypothetical protein K03531 ftsZ; cell division protein FtsZ
D HYD_1700 hypothetical protein K03590 ftsA; cell division protein FtsA
D HYD_5860 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D HYD_3680 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hec04147]
D HYD_2920 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HYD_3150 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HYD_5710 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HYD_7110 tuf2; elongation factor Tu 2 K02358 tuf; elongation factor Tu
D HYD_1360 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HYD_6960 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HYD_6410 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HYD_6660 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:hec02048]
D HYD_1690 hypothetical protein K03531 ftsZ; cell division protein FtsZ
D HYD_5650 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HYD_4170 gltX2_1; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_6320 gltX2_2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HYD_6390 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:hec01504]
D HYD_3910 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HYD_3900 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D HYD_2370 type I secretion protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hec03100]
D HYD_t0230 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HYD_t0180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HYD_t0320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HYD_t0150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HYD_t0050 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HYD_t0120 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HYD_t0260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HYD_t0430 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HYD_t0160 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HYD_t0450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HYD_t0270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HYD_t0420 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HYD_t0170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HYD_t0190 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HYD_t0310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HYD_t0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HYD_t0130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HYD_t0390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HYD_t0100 tRNA-Met K14230 tRNA-Met; tRNA Met
D HYD_t0110 tRNA-Met K14230 tRNA-Met; tRNA Met
D HYD_t0080 tRNA-Met K14230 tRNA-Met; tRNA Met
D HYD_t0010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HYD_t0350 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HYD_t0250 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HYD_t0410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HYD_t0200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0380 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HYD_t0340 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HYD_t0210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HYD_t0280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HYD_t0370 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HYD_t0070 tRNA-Val K14237 tRNA-Val; tRNA Val
D HYD_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HYD_6430 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HYD_0930 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D HYD_5580 hypothetical protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D HYD_5570 ornithine-acyl ACP N-acyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D HYD_5110 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HYD_2760 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HYD_1670 hypothetical protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D HYD_4230 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HYD_2510 hypothetical protein K04755 fdx; ferredoxin, 2Fe-2S
D HYD_7200 iscU; iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D HYD_6950 phospholipase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D HYD_4290 tig; trigger factor K03545 tig; trigger factor
D HYD_4140 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HYD_5120 ATPase AAA K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D HYD_5260 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HYD_5700 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D HYD_6010 UPF0102 protein K07460 yraN; putative endonuclease
D HYD_3440 DNA processing protein DprA K04096 smf; DNA processing protein
C 99979 Viral proteins
C 99998 Others
D HYD_0360 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HYD_6690 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HYD_4560 hypothetical protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D HYD_3130 nucleoside:proton symporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
D HYD_1770 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D HYD_6920 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HYD_6530 dedE; colicin V biosynthesis protein K03558 cvpA; membrane protein required for colicin V production
C 99997 Function unknown
D HYD_4480 ydhJ; hypothetical protein K06885 K06885; uncharacterized protein
D HYD_1250 membrane protein K06890 K06890; uncharacterized protein
D HYD_6400 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D HYD_4880 hypothetical protein K08998 K08998; uncharacterized protein
D HYD_0230 hypothetical protein K09131 K09131; uncharacterized protein
D HYD_3660 hypothetical protein K09985 K09985; uncharacterized protein
D HYD_2610 hypothetical protein K09987 K09987; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 22, 2024