+D GENES KO
#
KEGG Orthology (KO) - Halomonas elongata
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hel00010]
D HELO_3629 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HELO_4245 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_1718 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_2186 pfkA; 6-phosphofructokinase (pyrophosphate) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HELO_1183 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HELO_1180 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HELO_4141 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HELO_4242 gapA1; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_2214 homolog to glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_1181 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HELO_1030 gpmI; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HELO_3749 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HELO_4243 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_1605 pykA2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_2433 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HELO_3572 aceE; pyruvate dehydrogenase component E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HELO_3571 aceF; pyruvate dehydrogenase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_3466 frmA; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HELO_2818 adh2; alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HELO_2895 probable oxidoreductase (zinc-containing alcohol dehydrogenase family) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HELO_2817 acoD; acetaldehyde dehydrogenase (NAD) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D HELO_2142 acyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3563 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_2794 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_3630 epimerase domain protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D HELO_1685 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:hel00020]
D HELO_3117 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HELO_3816 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HELO_2437 acnB; aconitate hydratase / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HELO_3063 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HELO_3252 probable oxidative decarboxylase (homolog to isocitrate dehydrogenase) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HELO_3112 sucA; 2-oxoglutarate dehydrogenase component E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HELO_3111 sucB; 2-oxoglutarate dehydrogenase component E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_3108 sucD; succinate--CoA ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HELO_3109 sucC; succinate--CoA ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HELO_3114 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HELO_3113 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HELO_3116 sdhC; succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HELO_3115 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HELO_2547 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HELO_2298 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HELO_1693 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HELO_2206 biotin carboxylation domain protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D HELO_1685 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HELO_3572 aceE; pyruvate dehydrogenase component E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HELO_3571 aceF; pyruvate dehydrogenase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hel00030]
D HELO_4245 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_1718 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_3637 zwf; glucose-6-phosphate 1-dehydrogenase (NAD(P)) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HELO_3636 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D HELO_3380 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HELO_3966 tktA1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_3973 transketolase_Cterm domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_3974 transketolase_Nterm domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_1184 tktA2; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_1196 tktA3; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_3967 talA2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_2124 talA5; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_3498 talA3; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_2492 talA4; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_1185 talA1; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_1020 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HELO_1188 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HELO_3159 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HELO_2555 rbsK; probable ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HELO_3161 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_1877 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HELO_3628 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D HELO_3635 eda; 2-keto-3-deoxy-phosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HELO_4006 gcd; quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D HELO_1553 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HELO_3277 gluconate 2-dehydrogenase (acceptor) flavoprotein subunit K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D HELO_3279 gluconate 2-dehydrogenase (acceptor) subunit 3 K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D HELO_1171 kguK; probable 2-dehydro-3-deoxygluconokinase K11441 kguK; dehydrogluconokinase [EC:2.7.1.13]
D HELO_1170 ghrB; probable 2-ketogluconate reductase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D HELO_1782 gntK; gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D HELO_1604 gckA; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D HELO_1183 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HELO_1180 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HELO_2186 pfkA; 6-phosphofructokinase (pyrophosphate) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:hel00040]
D HELO_2960 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D HELO_2961 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D HELO_3555 probable oxidoreductase (homolog to mannitol dehydrogenase) K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D HELO_3554 probable dehydratase (homolog to altronate dehydratase) K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D HELO_1152 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D HELO_1146 rspA; mannonate/gluconate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D HELO_1151 rspD; fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D HELO_1147 rspB; L-gulonate dehydrogenase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D HELO_2329 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_2573 ugd2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_2572 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HELO_3380 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HELO_3496 carbohydrate kinase domain protein K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D HELO_2491 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D HELO_1157 galD; D-xylose/galactose 1-dehydrogenase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D HELO_2797 xylD; D-xylonate dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D HELO_1056 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_1563 2-ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_2807 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_3411 probable 2-ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_3492 rbtD; ribitol 2-dehydrogenase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56]
D HELO_2822 aldolase domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D HELO_4087 aldolase domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:hel00051]
D HELO_3631 probable fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_2822 aldolase domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D HELO_4087 aldolase domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D HELO_1050 L-galactonate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D HELO_3551 probable oxidoreductase (short-chain dehydrogenase family) K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D HELO_4213 rhaD; L-rhamnose-1-dehydrogenase K18337 LRA1; L-rhamnose 1-dehydrogenase [EC:1.1.1.378 1.1.1.377 1.1.1.173]
D HELO_4210 rhmD; L-rhamnonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D HELO_2186 pfkA; 6-phosphofructokinase (pyrophosphate) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HELO_3697 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HELO_2488 sorbitol dehydrogenase K08261 E1.1.99.21; D-sorbitol dehydrogenase (acceptor) [EC:1.1.99.21]
D HELO_2490 mtlD; mannitol 2-dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D HELO_1183 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HELO_1180 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HELO_4141 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HELO_1188 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HELO_3696 fruA; phosphotransferase system component EIIBC, fructose-specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:hel00052]
D HELO_2794 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HELO_2398 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HELO_3593 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HELO_2572 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_3629 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HELO_3596 rfbD; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HELO_2186 pfkA; 6-phosphofructokinase (pyrophosphate) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HELO_2796 araA; L-arabinose 1-dehydrogenase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]
D HELO_1779 dgoD; D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D HELO_1781 dgoK; 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D HELO_1780 dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D HELO_1097 glycoside hydrolase domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HELO_3677 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HELO_3687 probable glycoside hydrolase (homolog to alpha-glucosidase) K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:hel00053]
D HELO_2329 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_2573 ugd2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_1553 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HELO_1006 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HELO_3412 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D HELO_2800 araC; L-arabonate dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D HELO_1039 mandelate racemase domain protein K25260 lxyD; L-lyxonate dehydratase [EC:4.2.1.176]
D HELO_1056 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_1563 2-ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_2807 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_3411 probable 2-ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_3417 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D HELO_3413 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D HELO_3405 udh; uronate dehydrogenase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
D HELO_3406 D-galactarolactone isomerase K18982 gli; D-galactarolactone isomerase [EC:5.4.1.4]
D HELO_3407 gci; D-galactarolactone cycloisomerase K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]
C 00500 Starch and sucrose metabolism [PATH:hel00500]
D HELO_1097 glycoside hydrolase domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HELO_3677 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HELO_3687 probable glycoside hydrolase (homolog to alpha-glucosidase) K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HELO_2572 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HELO_2780 glycoside hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_3629 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HELO_4245 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_1718 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_3631 probable fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hel00520]
D HELO_2709 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HELO_3099 nagE; phosphotransferase system component EIICB, N-acetylglucosamine-specific K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HELO_3102 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HELO_3631 probable fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HELO_3101 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HELO_4435 glmS; glutamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HELO_4142 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HELO_4436 glmU; UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HELO_4112 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D HELO_2570 HAD superfamily hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D HELO_3486 kinase domain protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D HELO_3487 nucleotidyltransferase domain protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D HELO_1935 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HELO_1984 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HELO_2792 abfA; alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D HELO_1161 xynB; beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D HELO_3629 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_2572 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HELO_2329 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_2573 ugd2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_2398 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HELO_3593 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HELO_3596 rfbD; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HELO_1006 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HELO_4245 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_1718 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_3783 oxidoreductase domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:hel00620]
D HELO_2142 acyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3563 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3572 aceE; pyruvate dehydrogenase component E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HELO_3571 aceF; pyruvate dehydrogenase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_2818 adh2; alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HELO_3466 frmA; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HELO_2895 probable oxidoreductase (zinc-containing alcohol dehydrogenase family) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HELO_4243 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_1605 pykA2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_3788 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HELO_2181 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HELO_2180 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HELO_2240 accD; acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HELO_2553 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HELO_2817 acoD; acetaldehyde dehydrogenase (NAD) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D HELO_3948 ydiF; acetate CoA-transferase YdiF K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D HELO_1220 lldD; L-lactate dehydrogenase (cytochrome) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D HELO_4215 aldA; lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D HELO_3880 glyoxalase domain protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HELO_4299 gloA; glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HELO_2694 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HELO_3667 ghrA; glyoxylate/hydroxypyruvate reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D HELO_3817 maeA; malic enzyme (NAD) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HELO_3763 maeB; malic enzyme (NADP) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D HELO_3735 oadA; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HELO_3734 oadB; oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HELO_3736 oadC; oxaloacetate decarboxylase gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D HELO_2206 biotin carboxylation domain protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D HELO_1693 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HELO_2547 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HELO_2298 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HELO_3010 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HELO_1685 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HELO_2433 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HELO_4288 glcB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_1726 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hel00630]
D HELO_3070 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D HELO_2142 acyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3563 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_4288 glcB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D HELO_1693 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HELO_3117 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HELO_3816 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HELO_2437 acnB; aconitate hydratase / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3876 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D HELO_1587 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D HELO_1586 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D HELO_1585 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D HELO_3667 ghrA; glyoxylate/hydroxypyruvate reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D HELO_2556 probable 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HELO_3376 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HELO_1991 HAD superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HELO_1126 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1537 GlnA domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1891 spuB; GlnA/PuuA domain protein SpuB K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1902 puuA; glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_3598 glyA1; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_3449 glyA2; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_2526 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HELO_2529 gcvT; glycine cleavage system protein GcvT (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_2527 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HELO_1601 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D HELO_4234 xylose isomerase domain protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D HELO_1602 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D HELO_1208 uncharacterized protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D HELO_1603 glxR1; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D HELO_1047 glxR2; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D HELO_3289A glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HELO_1604 gckA; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D HELO_4215 aldA; lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D HELO_1564 dmlA; D-malate dehydrogenase (decarboxylating) K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D HELO_3635 eda; 2-keto-3-deoxy-phosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HELO_1895 FdsD domain protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D HELO_1897 homolog to NADH-quinone oxidoreductase subunit NuoG K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HELO_1898 homolog to NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HELO_1899 homolog to NADH-quinone oxidoreductase subunit NuoE K00127 fdoI; formate dehydrogenase subunit gamma
D HELO_3444 purU2; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HELO_2974 purU1; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:hel00640]
D HELO_2142 acyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3563 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_2686 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D HELO_3948 ydiF; acetate CoA-transferase YdiF K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D HELO_2370 bkdA1; branched-chain alpha-keto acid dehydrogenase component E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HELO_2371 bkdA2; branched-chain alpha-keto acid dehydrogenase component E1 beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HELO_2372 bkdB; branched-chain alpha-keto acid dehydrogenase component E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_3788 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HELO_2181 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HELO_2180 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HELO_2240 accD; acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HELO_1501 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D HELO_3082 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D HELO_1291 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D HELO_3109 sucC; succinate--CoA ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HELO_3108 sucD; succinate--CoA ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HELO_4230 mmsA3; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1292 mmsA2; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1515 mmsA1; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1741 prpC; methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D HELO_1742 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D HELO_2437 acnB; aconitate hydratase / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HELO_1740 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D HELO_4244 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:hel00650]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_3138 crt; short-chain-enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D HELO_1411 fabV; enoyl-(acyl-carrier-protein) reductase (NADH) FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HELO_3394 phbC; poly-beta-hydroxyalkanoate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D HELO_3876 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D HELO_3734 oadB; oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HELO_3962 catI; 3-oxoadipate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D HELO_3961 catJ; 3-oxoadipate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D HELO_1564 dmlA; D-malate dehydrogenase (decarboxylating) K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D HELO_3114 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HELO_3113 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HELO_3116 sdhC; succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HELO_3115 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HELO_3082 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D HELO_3081 gabD1; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_2175 gabD2; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_1042 probable oxidoreductase (iron-containing alcohol dehydrogenase family) K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D HELO_1133 hmgL2; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HELO_2935 hmgL1; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HELO_2537 scoA; succinyl-CoA:3-ketoacyl-CoA transferase subunit ScoA K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D HELO_2538 scoB; succinyl-CoA:3-ketoacyl-CoA transferase subunit ScoB K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D HELO_2535 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D HELO_2542 bdh; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D HELO_2499 probable oxidoreductase (zinc-containing alcohol dehydrogenase family) K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D HELO_1296 aruI2; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1333 ilvI; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_2761 aruI1; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1334 ilvH; acetolactate synthase regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HELO_3970B probable oxidoreductase (short-chain dehydrogenase family) K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:hel00660]
D HELO_1296 aruI2; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1333 ilvI; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_2761 aruI1; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1334 ilvH; acetolactate synthase regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HELO_3109 sucC; succinate--CoA ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HELO_3108 sucD; succinate--CoA ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HELO_2232 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HELO_2233 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HELO_2234 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hel00562]
D HELO_2541 homolog to inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HELO_1397 homolog to inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HELO_4239 idhA; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HELO_4231 iolE; inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D HELO_4232 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D HELO_4240 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D HELO_4233 iolC; 5-dehydro-2-deoxygluconokinase / DUF2090 domain protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D HELO_4230 mmsA3; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1292 mmsA2; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1515 mmsA1; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_4141 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hel00190]
D HELO_3377 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HELO_3114 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HELO_3113 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HELO_3116 sdhC; succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HELO_3115 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HELO_1943 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HELO_1944 petB; ubiquinol--cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HELO_1945 petC; ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HELO_2510 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HELO_3151 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HELO_3152 cyoD; cytochrome bo(3) ubiquinol oxidase subunit 4 K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D HELO_2505 ctaE; cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D HELO_2503 ctaD; cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D HELO_2502 ctaC; cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D HELO_2504 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D HELO_2509 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HELO_3536 ccoN; cbb3-type cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D HELO_3537 ccoO; cbb3-type cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D HELO_3538 ccoQ; cbb3-type cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D HELO_3539 ccoP; cbb3-type cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D HELO_3153 cyoC; cytochrome bo(3) ubiquinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D HELO_3154 cyoB; cytochrome bo(3) ubiquinol oxidase subunit 1 K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D HELO_3155 cyoA; cytochrome bo(3) ubiquinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D HELO_2456 cydA; cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HELO_2457 cydB; cytochrome bd ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HELO_4446 atpA; F0F1-type ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HELO_4444 atpD; F0F1-type ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HELO_4445 atpG; F0F1-type ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HELO_4447 atpH; F0F1-type ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HELO_4443 atpC; F0F1-type ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HELO_4450 atpB; F0F1-type ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HELO_4448 atpF; F0F1-type ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HELO_4449 atpE; F0F1-type ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HELO_2667 atvA; V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D HELO_2673 atvB; V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D HELO_2672 atvD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D HELO_2669 atvE; V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D HELO_2671 atvI; V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D HELO_2670 atvK; V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D HELO_2184 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D HELO_3780 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:hel00710]
D HELO_1181 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HELO_4242 gapA1; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_2214 homolog to glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_1183 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HELO_1180 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HELO_3966 tktA1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_3973 transketolase_Cterm domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_3974 transketolase_Nterm domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_1184 tktA2; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_1196 tktA3; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_1020 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HELO_1188 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HELO_3500 cbbP; phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D HELO_4141 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HELO_3380 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HELO_3967 talA2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_2124 talA5; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_3498 talA3; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_2492 talA4; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_1185 talA1; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HELO_3010 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HELO_1685 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HELO_3763 maeB; malic enzyme (NADP) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D HELO_1693 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:hel00720]
D HELO_2433 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HELO_3010 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HELO_2206 biotin carboxylation domain protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D HELO_1693 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HELO_2547 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D HELO_2298 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HELO_3114 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HELO_3113 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HELO_3116 sdhC; succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HELO_3115 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HELO_3108 sucD; succinate--CoA ligase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HELO_3109 sucC; succinate--CoA ligase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3063 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HELO_3252 probable oxidative decarboxylase (homolog to isocitrate dehydrogenase) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HELO_3816 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HELO_2437 acnB; aconitate hydratase / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HELO_3788 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HELO_2181 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HELO_2180 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HELO_2240 accD; acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HELO_2461 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HELO_2344 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HELO_1204 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HELO_2353 MetF family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HELO_2142 acyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3563 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:hel00680]
D HELO_3454 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D HELO_3466 frmA; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HELO_3465 yeiG; S-formylglutathione hydrolase YeiG K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D HELO_1897 homolog to NADH-quinone oxidoreductase subunit NuoG K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D HELO_1898 homolog to NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HELO_1899 homolog to NADH-quinone oxidoreductase subunit NuoE K00127 fdoI; formate dehydrogenase subunit gamma
D HELO_1895 FdsD domain protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D HELO_3598 glyA1; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_3449 glyA2; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_2556 probable 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HELO_1604 gckA; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D HELO_3749 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HELO_3010 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HELO_1693 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HELO_1183 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HELO_1180 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HELO_2186 pfkA; 6-phosphofructokinase (pyrophosphate) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HELO_2142 acyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3563 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_2433 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D HELO_1030 gpmI; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HELO_1081 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HELO_2720 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HELO_1722 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:hel00910]
D HELO_3211 major facilitator superfamily transport protein (probable substrate nitrate) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HELO_2857 major facilitator superfamily transport protein (probable substrate nitrate/nitrite) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HELO_2858 major facilitator superfamily transport protein (probable substrate nitrate/nitrite) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HELO_2854 narG; respiratory nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HELO_2853 narH; respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HELO_2851 narI; respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HELO_3231 nasA; nitrate reductase catalytic subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D HELO_3234 nasC; nitrite reductase electron transfer subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D HELO_3235 nirB; assimilatory nitrite reductase (NADH) large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D HELO_3236 nirD; assimilatory nitrite reductase (NADH) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D HELO_1662 npd; probable 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D HELO_3049 gdh; glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HELO_1126 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1537 GlnA domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1891 spuB; GlnA/PuuA domain protein SpuB K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1902 puuA; glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_3753 gltB; glutamate synthase (NADP) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HELO_3752 gltD; glutamate synthase (NADP) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HELO_2674 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HELO_2586 can; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hel00920]
D HELO_3382 cysP; ABC-type transport system periplasmic substrate-binding protein (probable substrate thiosulfate) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D HELO_3383 cysT; ABC-type transport system permease protein (probable substrate sulfate/thiosulfate) K02046 cysU; sulfate/thiosulfate transport system permease protein
D HELO_3384 cysW; ABC-type transport system permease protein (probable substrate sulfate/thiosulfate) K02047 cysW; sulfate/thiosulfate transport system permease protein
D HELO_3385 cysA; ABC-type transport system ATP-binding protein (probable substrate sulfate/thiosulfate) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HELO_2389 cysNC2; sulfate adenylyltransferase subunit 1 / adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HELO_1715 cysN1; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HELO_2387 cysD2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_1714 cysD1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_2386 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HELO_1737 homolog to phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D HELO_2607 ferredoxin domain protein / 4Fe-4S domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D HELO_2733 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_2007 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_1730 rhdA; thiosulfate sulfurtransferase RhdA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_3479 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D HELO_1395 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HELO_4117 metX; homoserine O-acetyltransferase subunit MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HELO_2245 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D HELO_3945 acyl-CoA dehydrogenase family protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D HELO_3139 acyl-CoA dehydrogenase family protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D HELO_2144 acyl-CoA dehydrogenase family protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D HELO_3943 enoyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hel00061]
D HELO_3788 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HELO_2181 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HELO_2180 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HELO_2240 accD; acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HELO_1999 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HELO_1997 fabD; (acyl-carrier-protein) S-malonyltransferase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HELO_3983 fabY; 3-oxoacyl-(acyl-carrier-protein) synthase FabY K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D HELO_1269 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HELO_2000 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HELO_2872 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2903 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_1998 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2334 bcdA; SDR family cyclic-diguanylate-sequestering protein BcdA K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_1270 fabA; 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HELO_3793 fabZ; 3-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HELO_1411 fabV; enoyl-(acyl-carrier-protein) reductase (NADH) FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HELO_2118 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hel00071]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_1759 fadA; fatty acid oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_1858 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D HELO_2426 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D HELO_2118 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HELO_4414 rubB; rubredoxin--NAD reductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D HELO_3466 frmA; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HELO_2818 adh2; alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hel00561]
D HELO_3289A glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HELO_1604 gckA; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D HELO_2895 probable oxidoreductase (zinc-containing alcohol dehydrogenase family) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D HELO_1187 DhaK domain protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HELO_1186 DhaL domain protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HELO_3001 glpK1; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HELO_3972 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HELO_3567 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HELO_1996 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HELO_3475 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HELO_1268 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HELO_3867 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HELO_3977 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:hel00564]
D HELO_3421 gpsA; glycerol-3-phosphate dehydrogenase, NAD(P)H-dependent K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HELO_2984 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HELO_3003 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HELO_3567 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HELO_3475 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HELO_1268 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HELO_3867 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HELO_3977 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HELO_2044 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D HELO_2435 GlpQ domain protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HELO_1846 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HELO_1108 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HELO_3799 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HELO_1338 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HELO_1729 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HELO_2812 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HELO_3586 pgpA1; phosphatidylglycerophosphatase PgpA K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D HELO_1610 pgpA2; phosphatidylglycerophosphatase PgpA K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D HELO_2548 clsA; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D HELO_3566 phospholipase domain protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:hel00565]
D HELO_2044 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D HELO_2044 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D HELO_2044 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:hel00592]
D HELO_2044 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D HELO_1759 fadA; fatty acid oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:hel01040]
D HELO_3602 tesA; esterase TesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HELO_1669 tesB; acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HELO_4424 thioesterase domain protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hel00230]
D HELO_1711 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HELO_1681 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D HELO_3161 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_1877 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HELO_2244 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HELO_3502 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HELO_2291 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HELO_1672 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HELO_2292 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HELO_1532 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HELO_1531 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HELO_3577 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HELO_3067 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HELO_2176 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HELO_2994 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HELO_3614 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HELO_1682 HAD superfamily hydrolase (homolog to GMP/IMP nucleotidase) K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D HELO_3162 deoD; purine nucleoside phosphorylase DeoD K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HELO_1331 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HELO_2708 phosphoribosyltransferase domain protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HELO_1629 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HELO_1391 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HELO_4466 rdgB; non-canonical purine NTP pyrophosphatase RdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HELO_2993 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HELO_2466 xdhA; xanthine dehydrogenase molybdenum-binding subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D HELO_2465 xdhB; xanthine dehydrogenase FAD-binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D HELO_1630 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HELO_2463 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D HELO_4403 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HELO_3889 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HELO_4433 nrdE; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HELO_3890 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HELO_4434 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HELO_1639 NrdD domain protein K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HELO_1138 deoxynucleosidetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D HELO_4026 yfdR; YfdR family protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D HELO_4405 spoT; bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HELO_3786 ppx; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HELO_3012 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D HELO_3359 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HELO_2524 ygdH; LOG family protein YgdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D HELO_2460 adenine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D HELO_3570 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HELO_3011 mazG; nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HELO_1713 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D HELO_3480 apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D HELO_2389 cysNC2; sulfate adenylyltransferase subunit 1 / adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HELO_1715 cysN1; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HELO_2387 cysD2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_1714 cysD1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_1591 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D HELO_1596 allantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D HELO_1597 puuE; allantoinase K16842 hpxB; allantoinase [EC:3.5.2.5]
D HELO_1302 probable amidase (homolog to N-carbamoyl-L-amino acid hydrolase) K02083 allC; allantoate deiminase [EC:3.5.3.9]
D HELO_1600 allE; allantoicase / (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D HELO_1599 allA; ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D HELO_2279 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HELO_2278 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HELO_2277 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D HELO_2674 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:hel00240]
D HELO_4148 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HELO_4149 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HELO_1062 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HELO_2340 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HELO_3047 pyrD; dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D HELO_4393 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HELO_2870 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HELO_3802 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HELO_1391 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HELO_3011 mazG; nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HELO_1913 yhdE; Maf family protein YhdE K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HELO_3751 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HELO_2717 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HELO_3614 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HELO_2991 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HELO_2524 ygdH; LOG family protein YgdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D HELO_3163 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HELO_2306K cytidine deaminase domain protein K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HELO_1770 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D HELO_1639 NrdD domain protein K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HELO_2288 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HELO_3889 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HELO_4433 nrdE; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HELO_3890 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HELO_4434 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HELO_4026 yfdR; YfdR family protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D HELO_2003 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HELO_3828 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HELO_3160 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D HELO_1701 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HELO_3264 probable amidase (homolog to N-carbamoyl-L-amino acid hydrolase) K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HELO_3919 probable N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hel00250]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_2864 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HELO_2448 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HELO_2703 carbon-nitrogen hydrolase domain protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D HELO_2013 alaA; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HELO_3819 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HELO_2743 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HELO_4256 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HELO_3359 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HELO_3067 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HELO_1062 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HELO_3082 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D HELO_3081 gabD1; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_2175 gabD2; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_3753 gltB; glutamate synthase (NADP) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HELO_3752 gltD; glutamate synthase (NADP) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HELO_3049 gdh; glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HELO_1802 putA; bifunctional proline dehydrogenase / pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HELO_1126 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1537 GlnA domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1891 spuB; GlnA/PuuA domain protein SpuB K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1902 puuA; glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_4148 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HELO_4149 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HELO_3101 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HELO_4435 glmS; glutamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HELO_2244 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hel00260]
D HELO_3742 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HELO_2235 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HELO_3857 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HELO_4004 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D HELO_3856 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HELO_3598 glyA1; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_3449 glyA2; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_2556 probable 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HELO_3667 ghrA; glyoxylate/hydroxypyruvate reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D HELO_3289A glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HELO_1604 gckA; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D HELO_1030 gpmI; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HELO_1081 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HELO_2720 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HELO_1722 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HELO_2526 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HELO_2529 gcvT; glycine cleavage system protein GcvT (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_2527 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HELO_1338 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HELO_1859 betA; choline dehydrogenase BetA K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D HELO_1860 betB; betaine aldehyde dehydrogenase BetB K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D HELO_1294 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D HELO_2768 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D HELO_3452 hpbB; stachydrine demethylase K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D HELO_3451 hpbC; probable iron-sulfur protein (2Fe-2S) HpbC K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D HELO_3460 hpbA; N-methylproline demethylase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D HELO_3459 DUF3483 domain protein / 4Fe-4S ferredoxin domain protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D HELO_3458 EtfA family protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D HELO_3457 EtfB family protein K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D HELO_3446 soxA; sarcosine oxidase alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D HELO_3448 soxB; sarcosine oxidase beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D HELO_3445 soxG; sarcosine oxidase gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D HELO_3447 soxD; sarcosine oxidase delta subunit K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D HELO_3468 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HELO_3251 tdcB; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HELO_3660 eutB; L-threonine dehydratase family protein EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HELO_1021 ilvA; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HELO_1520 PLP barrel domain protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D HELO_3136 ygeA; YgeA family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HELO_2239 trpA2; tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HELO_4327 trpA1; tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HELO_2238 trpB2; tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HELO_4326 trpB1; tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HELO_2589 ectB; diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D HELO_2588 ectA; L-2,4-diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D HELO_2590 ectC; L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D HELO_4008 ectD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
D HELO_3665 doeA; ectoine hydrolase K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D HELO_3664 doeB; N-alpha-acetyl-L-2,4-diaminobutyric acid deacetylase K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]
D HELO_3661 doeD; diaminobutyrate--2-oxoglutarate aminotransferase K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D HELO_3662 doeC; aspartate-semialdehyde dehydrogenase (NAD(P)) (non-phosphorylating) K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
C 00270 Cysteine and methionine metabolism [PATH:hel00270]
D HELO_1395 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HELO_1353 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HELO_2605 metH; methionine synthase, cobalamin-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HELO_3885 metE; methionine synthase MetE, cobalamin-independent K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HELO_1197 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HELO_3489 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HELO_1090 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HELO_2341 pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HELO_1484 nucleoside phosphorylase domain protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HELO_1331 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HELO_3000 msrC; methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D HELO_4206 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_4398 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_2111 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_1199 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HELO_2343 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HELO_3742 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HELO_2235 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HELO_3857 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HELO_4117 metX; homoserine O-acetyltransferase subunit MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HELO_2245 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D HELO_2877 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_1357 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_1688 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HELO_1058 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_2733 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_2007 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_1730 rhdA; thiosulfate sulfurtransferase RhdA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_3136 ygeA; YgeA family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HELO_1693 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HELO_3468 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HELO_3014 cysM; cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D HELO_1081 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HELO_2720 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hel00280]
D HELO_2877 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_1357 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_2552 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HELO_2370 bkdA1; branched-chain alpha-keto acid dehydrogenase component E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HELO_2371 bkdA2; branched-chain alpha-keto acid dehydrogenase component E1 beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HELO_2372 bkdB; branched-chain alpha-keto acid dehydrogenase component E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_2931 ivd; isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_1759 fadA; fatty acid oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HELO_2425 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D HELO_4230 mmsA3; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1292 mmsA2; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1515 mmsA1; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1500 matB; malonate--CoA ligase / methylmalonate--CoA ligase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D HELO_1291 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D HELO_3082 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D HELO_2934 mccA; methylcrotonoyl-CoA carboxylase alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D HELO_2932 mccB; methylcrotonoyl-CoA carboxylase beta subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D HELO_2933 probable enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D HELO_1133 hmgL2; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HELO_2935 hmgL1; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HELO_2537 scoA; succinyl-CoA:3-ketoacyl-CoA transferase subunit ScoA K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D HELO_2538 scoB; succinyl-CoA:3-ketoacyl-CoA transferase subunit ScoB K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D HELO_2535 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hel00290]
D HELO_3251 tdcB; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HELO_3660 eutB; L-threonine dehydratase family protein EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HELO_1021 ilvA; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HELO_2232 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HELO_2233 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HELO_2234 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HELO_1296 aruI2; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1333 ilvI; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_2761 aruI1; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1334 ilvH; acetolactate synthase regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HELO_1337 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HELO_1679 ilvD1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HELO_1522 ilvD2; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HELO_2877 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_1357 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_2552 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HELO_2013 alaA; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HELO_1726 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hel00300]
D HELO_3857 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HELO_3742 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HELO_2235 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HELO_4088 DapA domain protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HELO_2823 DapA domain protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HELO_3580 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HELO_4150 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HELO_3809 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HELO_1415 aruC; multifunctional acetylornithine/succinylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HELO_3807 dapC; succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D HELO_3810 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HELO_4259 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HELO_3335 probable decarboxylase (homolog to diaminopimelate decarboxylase) K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HELO_4258 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HELO_1956 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HELO_1957 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hel00310]
D HELO_4312 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D HELO_4309 gabT2; 4-aminobutyrate aminotransferase K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39]
D HELO_3111 sucB; 2-oxoglutarate dehydrogenase component E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_2426 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3136 ygeA; YgeA family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HELO_3082 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D HELO_3081 gabD1; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_2175 gabD2; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_1526 lhgO; L-2-hydroxyglutarate oxidase LhgO K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D HELO_4308 DUF1338 family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D HELO_4218 ydiJ; YdiJ family protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D HELO_2427 succinate--hydroxymethylglutarate CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D HELO_2337 FAD-dependent oxidoreductase K26064 amaD; D-lysine oxidase
D HELO_3404 lhpD; delta-1-pyrroline-2-carboxylate reductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D HELO_4315 FAD-dependent oxidoreductase K26065 amaA; L-pipecolate oxidase
D HELO_1569 gamma-butyrobetaine dioxygenase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1]
D HELO_2757 gamma-butyrobetaine dioxygenase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1]
D HELO_2759 probable dioxygenase (homolog to gamma-butyrobetaine dioxygenase) K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1]
C 00220 Arginine biosynthesis [PATH:hel00220]
D HELO_2675 arcB; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HELO_2746 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HELO_2743 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HELO_4256 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HELO_2279 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HELO_2278 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HELO_2277 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D HELO_2676 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D HELO_1126 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1537 GlnA domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1891 spuB; GlnA/PuuA domain protein SpuB K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1902 puuA; glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_4148 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HELO_4149 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HELO_2674 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HELO_3049 gdh; glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_2013 alaA; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HELO_1617 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D HELO_1972 argJ; bifunctional ornithine acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D HELO_3830 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D HELO_4460 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D HELO_1415 aruC; multifunctional acetylornithine/succinylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HELO_3190 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D HELO_3263 homolog to acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:hel00330]
D HELO_1770 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D HELO_4005 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D HELO_3922 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D HELO_1974 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D HELO_1090 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HELO_3489 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HELO_1904 spuC; putrescine aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D HELO_2764 aruH; arginine--pyruvate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D HELO_1298 gbuA; guanidinobutyrase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D HELO_4085 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_2947 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_1416 aruF; arginine N-succinyltransferase subunit AruF K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D HELO_1417 aruG; arginine N-succinyltransferase subunit AruG K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D HELO_1419 aruB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D HELO_1418 aruD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D HELO_1552 aruE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D HELO_1886 FAD-dependent oxidoreductase (homolog to gamma-glutamylputrescine oxidoreductase) K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D HELO_1893 puuB; gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D HELO_1453 puuC3; aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D HELO_3918 puuC2; aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D HELO_4115 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HELO_1802 putA; bifunctional proline dehydrogenase / pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HELO_1313 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HELO_2193 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_2887 proline racemase family protein K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77]
C 00340 Histidine metabolism [PATH:hel00340]
D HELO_1936 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HELO_3360 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D HELO_3774 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D HELO_2599 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D HELO_4014 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D HELO_4015 hisH; imidazoleglycerol-phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HELO_4013 hisF; imidazoleglycerol-phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HELO_4016 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D HELO_4109 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2330 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_1937 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D HELO_2475 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D HELO_2476 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D HELO_2478 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D HELO_2477 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D HELO_2826 hdc; histidine decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22]
C 00350 Tyrosine metabolism [PATH:hel00350]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_4109 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2330 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2261 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HELO_1068 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D HELO_1066 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D HELO_1067 fumarylacetoacetate hydrolase domain protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D HELO_3466 frmA; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HELO_2818 adh2; alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HELO_4214 hpcH; 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D HELO_3081 gabD1; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_2175 gabD2; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:hel00360]
D HELO_2254 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_4109 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2330 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2261 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HELO_2251 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D HELO_1513 katG; catalase / peroxidase KatG K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D HELO_4085 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_2947 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:hel00380]
D HELO_1509 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D HELO_1508 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D HELO_3111 sucB; 2-oxoglutarate dehydrogenase component E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_2426 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_4085 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_2947 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_1513 katG; catalase / peroxidase KatG K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hel00400]
D HELO_3781 aroF2; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HELO_3030 aroF1; phospho-2-dehydro-3-heoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HELO_3754 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HELO_3975 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HELO_1380 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HELO_3755 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HELO_2718 aroA; prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D HELO_3397 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HELO_3375 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HELO_3374 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HELO_3373 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D HELO_2237 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D HELO_3372 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D HELO_2239 trpA2; tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HELO_4327 trpA1; tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HELO_2238 trpB2; tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HELO_4326 trpB1; tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HELO_2719 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_4109 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2330 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2254 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:hel00410]
D HELO_4130 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D HELO_3082 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D HELO_4129 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HELO_3264 probable amidase (homolog to N-carbamoyl-L-amino acid hydrolase) K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HELO_3919 probable N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HELO_1291 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_1501 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D HELO_4230 mmsA3; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1292 mmsA2; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HELO_1515 mmsA1; methylmalonate-semialdehyde dehydrogenase (CoA-acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:hel00430]
D HELO_2027 homolog to gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_3381 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_3819 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HELO_3049 gdh; glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:hel00450]
D HELO_1353 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HELO_2605 metH; methionine synthase, cobalamin-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HELO_3885 metE; methionine synthase MetE, cobalamin-independent K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HELO_1787 sufS; cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HELO_3814 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HELO_2389 cysNC2; sulfate adenylyltransferase subunit 1 / adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HELO_1715 cysN1; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HELO_2387 cysD2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_1714 cysD1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_4105 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HELO_2728 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hel00460]
D HELO_2780 glycoside hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HELO_2027 homolog to gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_3381 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_2448 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HELO_3598 glyA1; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_3449 glyA2; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hel00470]
D HELO_3609 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HELO_1964 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HELO_3136 ygeA; YgeA family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D HELO_3051 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HELO_1959 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HELO_1520 PLP barrel domain protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D HELO_4259 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HELO_3335 probable decarboxylase (homolog to diaminopimelate decarboxylase) K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HELO_4258 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HELO_1555 lhpA; 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D HELO_1556 D-hydroxyproline dehydrogenase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-]
D HELO_1562 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D HELO_1056 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_1563 2-ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_2807 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_3411 probable 2-ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D HELO_2251 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:hel00480]
D HELO_2027 homolog to gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_3381 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_3250 chaC; glutathione-specific gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D HELO_2379 UPF0271 family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HELO_2381 uncharacterized protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D HELO_1688 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HELO_1058 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HELO_1358 pepA; aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HELO_3437 pepN; aminopeptidase PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HELO_3994 pepD; non-specific dipeptidase, cytosolic K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HELO_2738 probable glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HELO_1811 dcmA; putative dichloromethane dehalogenase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HELO_1202 glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HELO_2587 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D HELO_3063 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HELO_3252 probable oxidative decarboxylase (homolog to isocitrate dehydrogenase) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HELO_1170 ghrB; probable 2-ketogluconate reductase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D HELO_3637 zwf; glucose-6-phosphate 1-dehydrogenase (NAD(P)) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HELO_1409 peroxiredoxin K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D HELO_3212 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D HELO_1090 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:hel00540]
D HELO_3792 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HELO_1968 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HELO_3794 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HELO_2354 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HELO_3791 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HELO_1981 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HELO_1928 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HELO_3750 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HELO_1927 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HELO_1983 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HELO_1019 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HELO_3144 probable acyltransferase (homolog to lipid A biosynthesis lauroyl acyltransferase) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HELO_3608 lpxP; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HELO_2700 DUF2219 family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D HELO_3273 LpxT family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D HELO_1573 EptA family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D HELO_1016A kdkA; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D HELO_1949 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HELO_1018 hldE; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HELO_1005 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HELO_1011 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D HELO_1012 waaF; ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D HELO_3274 uncharacterized protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hel00541]
D HELO_2572 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HELO_2398 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HELO_3593 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HELO_3596 rfbD; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HELO_2329 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_2573 ugd2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HELO_1006 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HELO_2397 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HELO_2396 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HELO_1267 homolog to dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D HELO_3783 oxidoreductase domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D HELO_4436 glmU; UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:hel00550]
D HELO_1935 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HELO_1984 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HELO_1963 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HELO_1959 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HELO_1956 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HELO_1964 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HELO_1957 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HELO_3800 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HELO_4438 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HELO_2531 PAP2 domain protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HELO_1958 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HELO_1962 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HELO_3463 mtgA; biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HELO_3761 peptidoglycan transglycosylase / transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HELO_2197 mrdA; probable transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HELO_1955 ftsI; peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HELO_2201 dacA1; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HELO_3978 peptidase S13 family protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:hel00552]
D HELO_4438 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HELO_2531 PAP2 domain protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hel00543]
D HELO_1395 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hel00730]
D HELO_3148 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D HELO_4269 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HELO_4463 probable kinase (homolog to phosphomethylpyrimidine kinase) K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HELO_1393 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HELO_2727 thiI; tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HELO_1326 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D HELO_1084 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HELO_4284 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HELO_4302 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HELO_4303 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HELO_3587 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HELO_1731 rsgA; ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HELO_1560 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HELO_3570 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HELO_3147 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:hel00740]
D HELO_1088 ribA; GTP cyclohydrolase 2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HELO_3590 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HELO_3591 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HELO_1195 ribH2; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HELO_3589 ribH1; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HELO_2996 ribC; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HELO_1316 ribF; bifunctional riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HELO_1843 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D HELO_4302 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HELO_1711 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HELO_2188 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:hel00750]
D HELO_2615 pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D HELO_1182 epd; D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D HELO_2011 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D HELO_2720 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HELO_1038 pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D HELO_3483 pdxA1; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D HELO_3017 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D HELO_3856 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hel00760]
D HELO_2864 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HELO_1678 nadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D HELO_3574 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D HELO_3669 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HELO_3162 deoD; purine nucleoside phosphorylase DeoD K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HELO_3614 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HELO_2550 nadM; nicotinamide-nucleotide adenylyltransferase / ADP-ribose diphosphatase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D HELO_2194 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HELO_3011 mazG; nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HELO_2690 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D HELO_1328 nadE; NAD synthase (glutamine-hydrolyzing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HELO_3746 pncC; nicotinamide-nucleotide amidohydrolase PncC K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D HELO_3668 pncA; nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D HELO_1367 npdA1; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HELO_1807 nadK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HELO_3423 pntA; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HELO_3422 pntB; NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D HELO_3081 gabD1; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HELO_2175 gabD2; succinate-semialdehyde dehydrogenase (NAD(P)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:hel00770]
D HELO_1296 aruI2; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1333 ilvI; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_2761 aruI1; 2-ketoarginine decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HELO_1334 ilvH; acetolactate synthase regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HELO_1337 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HELO_1679 ilvD1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HELO_1522 ilvD2; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HELO_4128 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D HELO_2300 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HELO_4129 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HELO_1222 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D HELO_3827 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HELO_3011 mazG; nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HELO_3984 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HELO_2711 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HELO_3016 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HELO_2622 acpH; (acyl-carrier-protein) phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D HELO_2877 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_1357 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_3264 probable amidase (homolog to N-carbamoyl-L-amino acid hydrolase) K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HELO_3919 probable N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D HELO_4130 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:hel00780]
D HELO_2167 bioC; malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D HELO_1269 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HELO_2000 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HELO_2872 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2903 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_1998 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2334 bcdA; SDR family cyclic-diguanylate-sequestering protein BcdA K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_3793 fabZ; 3-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HELO_2168 bioH; pimelyl-(acyl-carrier protein) methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D HELO_2169 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HELO_2407 wcbT; probable aminotransferase WcbT K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HELO_2155 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HELO_2166 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HELO_2170 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D HELO_1221 birA; bifunctional biotin--acetyl-CoA-carboxylase ligase / transcription regulator K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HELO_3315 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:hel00785]
D HELO_2203 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D HELO_2204 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_3572 aceE; pyruvate dehydrogenase component E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HELO_3571 aceF; pyruvate dehydrogenase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HELO_3112 sucA; 2-oxoglutarate dehydrogenase component E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HELO_3111 sucB; 2-oxoglutarate dehydrogenase component E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HELO_2370 bkdA1; branched-chain alpha-keto acid dehydrogenase component E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D HELO_2371 bkdA2; branched-chain alpha-keto acid dehydrogenase component E1 beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D HELO_2372 bkdB; branched-chain alpha-keto acid dehydrogenase component E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D HELO_2526 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D HELO_2529 gcvT; glycine cleavage system protein GcvT (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HELO_2527 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:hel00790]
D HELO_2173 folE1; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HELO_2031 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D HELO_1560 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HELO_2384 phoD family phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HELO_3476 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HELO_4127 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HELO_3477 homolog to 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HELO_4143 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HELO_1702 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HELO_2241 folC; dihydrofolate synthase / folylpolyglutamate synthase FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HELO_1088 ribA; GTP cyclohydrolase 2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HELO_3590 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HELO_1738 pabB; aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D HELO_2001 aminotransferase domain protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D HELO_2174 folX; dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D HELO_3782 probable oxidoreductase (short-chain dehydrogenase family) K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D HELO_2253 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D HELO_2254 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D HELO_2443 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HELO_2444 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HELO_2018 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HELO_2977 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HELO_2979 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HELO_2978 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HELO_2620 moaB; molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HELO_2621 moeA; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HELO_1282 uncharacterized protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D HELO_2981 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:hel00670]
D HELO_1702 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HELO_3782 probable oxidoreductase (short-chain dehydrogenase family) K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D HELO_2461 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HELO_2344 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HELO_3598 glyA1; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_3449 glyA2; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HELO_2291 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HELO_2176 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HELO_1375 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HELO_2529 gcvT; glycine cleavage system protein GcvT (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HELO_2605 metH; methionine synthase, cobalamin-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HELO_1701 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HELO_3444 purU2; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HELO_2974 purU1; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HELO_1204 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HELO_2353 MetF family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HELO_1022 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hel00860]
D HELO_3119 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HELO_1881 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D HELO_4464 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HELO_3779 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HELO_4255 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D HELO_4254 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D HELO_1089 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D HELO_1379 hemF; coproporphyrinogen-III oxidase, oxygen-dependent K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D HELO_2849 hemN; coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D HELO_4462 UPF0093 family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D HELO_3520 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D HELO_4253 hemX; HemX family protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HELO_3230 sirA2; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HELO_2263 sirA1; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HELO_2510 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HELO_3151 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HELO_2509 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HELO_1273 CbiX family protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D HELO_1835 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D HELO_1833 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D HELO_1836 cobJ; precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D HELO_1840 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D HELO_1839 CbiG domain protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D HELO_1841 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D HELO_1837 cobK; cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D HELO_1838 cobL; precorrin-6Y C(5,15)-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D HELO_1834 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D HELO_1830 cobB; hydrogenobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D HELO_1832 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D HELO_3440 cobO2; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HELO_1842 cobO1; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HELO_1844 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HELO_1816 cbiB; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HELO_1818 cobU; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HELO_1821 homolog to cobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HELO_1819 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D HELO_1815 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HELO_1820 homolog to phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D HELO_1817 cobD; threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D HELO_1829 chlD; probable cobaltochelatase subunit ChlD K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D HELO_1363 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hel00130]
D HELO_3952 thioesterase domain protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D HELO_4414A ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D HELO_4415 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HELO_3784 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D HELO_2188 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HELO_1027 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinolhydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D HELO_2571 ubiG; bifunctional ubiquinone biosynthesis 0-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D HELO_1026 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D HELO_3771 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D HELO_3490 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D HELO_2835 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D HELO_2613 wrbA; NAD(P)H dehydrogenase (quinone) K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D HELO_2261 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hel00900]
D HELO_1084 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HELO_3798 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HELO_3617 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HELO_1878 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HELO_3616 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D HELO_1387 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HELO_1320 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2188 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HELO_1083 ispA; farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HELO_1309 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HELO_3800 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:hel00907]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_1133 hmgL2; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HELO_2935 hmgL1; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HELO_1759 fadA; fatty acid oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HELO_3966 tktA1; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_3973 transketolase_Cterm domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_3974 transketolase_Nterm domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_1184 tktA2; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HELO_1196 tktA3; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:hel00523]
D HELO_2397 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HELO_2396 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HELO_1267 homolog to dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:hel01053]
D HELO_2835 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D HELO_2837 entB; enterobactin synthase component EntB K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D HELO_2838 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D HELO_2836 entE; enterobactin synthase component EntE K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C 01055 Biosynthesis of vancomycin group antibiotics
D HELO_2396 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:hel00946]
D HELO_2780 glycoside hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HELO_1444 blaA; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:hel00332]
D HELO_1313 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HELO_2193 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hel00261]
D HELO_2389 cysNC2; sulfate adenylyltransferase subunit 1 / adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HELO_1715 cysN1; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D HELO_2387 cysD2; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_1714 cysD1; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HELO_3742 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HELO_2235 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HELO_4088 DapA domain protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HELO_2823 DapA domain protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HELO_3580 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HELO_4150 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hel00521]
D HELO_3629 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HELO_3829 algC; phosphoglucomutase / phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HELO_2541 homolog to inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HELO_1397 homolog to inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HELO_4239 idhA; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D HELO_2397 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HELO_2396 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HELO_1267 homolog to dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HELO_3629 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:hel00525]
D HELO_2397 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HELO_2396 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hel00401]
D HELO_2718 aroA; prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_4109 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2330 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:hel00405]
D HELO_1064 PhzF family protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D HELO_3375 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HELO_3374 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HELO_1997 fabD; (acyl-carrier-protein) S-malonyltransferase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HELO_2872 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2903 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_1998 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2334 bcdA; SDR family cyclic-diguanylate-sequestering protein BcdA K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HELO_1999 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hel00999]
D HELO_1197 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HELO_1380 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HELO_2780 glycoside hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:hel00997]
D HELO_3334 IucA domain protein K23374 sbnF; 2-[(L-alanin-3-ylcarbamoyl)methyl]-3-(2-aminoethylcarbamoyl)-2-hydroxypropanoate synthase [EC:6.3.2.55]
D HELO_3332 IucA domain protein K23375 sbnC; staphyloferrin B synthase [EC:6.3.2.56]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:hel00362]
D HELO_3958 alpha/beta hydrolase fold protein / AhpD domain protein K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44]
D HELO_1759 fadA; fatty acid oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HELO_3960 pcaF; beta-ketoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D HELO_3955 pcaG; protocatechuate 3,4-dioxygenase alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D HELO_3956 pcaH; protocatechuate 3,4-dioxygenase beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D HELO_3963 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D HELO_1856 AhpD domain protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D HELO_3929 pobA; p-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D HELO_3952 thioesterase domain protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D HELO_3734 oadB; oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HELO_2426 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:hel00627]
D HELO_4085 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_2947 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_2553 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HELO_1144 flavin-dependent dehydrogenase K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31]
D HELO_3934 mdlC; benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D HELO_2188 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HELO_3932 vdh; vanillin dehydrogenase K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67]
D HELO_3940 vanA; vanillate O-demethylase oxygenase subunit K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D HELO_3941 probable oxidoreductase (homolog to vanillate O-demethylase oxidoreductase) K03863 vanB; vanillate monooxygenase ferredoxin subunit
C 00364 Fluorobenzoate degradation [PATH:hel00364]
D HELO_3165 alpha/beta hydrolase fold protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:hel00625]
D HELO_2818 adh2; alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HELO_3466 frmA; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HELO_3454 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D HELO_3658 HAD superfamily hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hel00361]
D HELO_3165 alpha/beta hydrolase fold protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D HELO_3658 HAD superfamily hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:hel00623]
D HELO_3165 alpha/beta hydrolase fold protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:hel00633]
D HELO_3189 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D HELO_1759 fadA; fatty acid oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:hel00643]
D HELO_1068 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D HELO_1066 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D HELO_1067 fumarylacetoacetate hydrolase domain protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D HELO_4085 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_2947 amidase domain protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HELO_3962 catI; 3-oxoadipate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D HELO_3961 catJ; 3-oxoadipate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D HELO_3948 ydiF; acetate CoA-transferase YdiF K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D HELO_2279 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HELO_2278 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HELO_2277 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:hel00930]
D HELO_1553 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HELO_1758 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:hel00626]
D HELO_2818 adh2; alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HELO_3466 frmA; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D HELO_3955 pcaG; protocatechuate 3,4-dioxygenase alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D HELO_3956 pcaH; protocatechuate 3,4-dioxygenase beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hel03020]
D HELO_1229 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HELO_1230 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HELO_1261 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HELO_4404 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D HELO_3904 helicase domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hel03010]
D HELO_2716 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HELO_3804 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HELO_1242 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HELO_1260 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HELO_1253 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HELO_3526 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HELO_1232 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HELO_1250 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HELO_1942 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HELO_1235 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HELO_1259 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HELO_1231 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HELO_1258 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HELO_1249 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HELO_4134 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HELO_3863 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HELO_1245 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HELO_3525 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HELO_1240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HELO_1314 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HELO_3473 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HELO_1226 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HELO_1239 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HELO_1236 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HELO_1237 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HELO_1248 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HELO_1251 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HELO_1228 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HELO_3523 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HELO_1227 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HELO_1225 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HELO_1941 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HELO_1246 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HELO_1255 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HELO_1243 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HELO_1262 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HELO_1252 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HELO_3860 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HELO_2517 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HELO_1310 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HELO_1241 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HELO_1238 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HELO_1247 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HELO_1876 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HELO_1311 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HELO_3825 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HELO_1244 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HELO_1254 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HELO_3764 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HELO_1995 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HELO_3824 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HELO_4473 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HELO_2516 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HELO_1257 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HELO_RNA16S1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S3 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S2 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA23S4 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S1 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S3 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA5S1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S4 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S2 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hel00970]
D HELO_TRNA17 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA64 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA9 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA39 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA57 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA58 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA34 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA68 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA15 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA20 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HELO_TRNA21 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HELO_TRNA22 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HELO_TRNA52 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HELO_TRNA55 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HELO_TRNA54 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HELO_TRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HELO_TRNA24 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HELO_TRNA62 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HELO_TRNA25 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA29 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA27 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA45 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA26 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA40 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA30 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA18 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA35 tRNA-His K14226 tRNA-His; tRNA His
D HELO_TRNA36 tRNA-His K14226 tRNA-His; tRNA His
D HELO_TRNA1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA65 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA16 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA8 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA42 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA67 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA51 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA49 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HELO_TRNA14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HELO_TRNA19 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA23 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA48 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA60 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA66 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA61 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HELO_TRNA7 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HELO_TRNA37 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HELO_TRNA33 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HELO_TRNA59 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HELO_TRNA31 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HELO_TRNA38 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HELO_TRNA12 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA63 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA6 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HELO_TRNA3 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HELO_TRNA43 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_TRNA44 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_TRNA53 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_TRNA56 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_3119 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HELO_1908 gatA; aspartyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HELO_1907 gatB; aspartyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HELO_1909 gatC; aspartyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HELO_2356 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HELO_3743 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HELO_2558 aspS; aspartate--tRNA(Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HELO_1010 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HELO_1009 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HELO_2514 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HELO_3370 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HELO_2357 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HELO_2728 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HELO_1375 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HELO_1354 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HELO_2227 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HELO_1317 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HELO_3843 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HELO_3766 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HELO_2307 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HELO_1386 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HELO_2518 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HELO_2519 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HELO_4111 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HELO_3818 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hel03060]
D HELO_1256 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HELO_1223 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HELO_4140 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HELO_1400 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HELO_1399 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HELO_1401 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HELO_4471 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HELO_1971 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HELO_1032 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HELO_3864 ffh; SRP54-type signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HELO_RNA7S SRP RNA (7S RNA) K01983 ffs; SRP RNA
D HELO_3835 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HELO_2734 ArsA family protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D HELO_3775 tatA; twin arginine translocation system protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D HELO_3776 tatB; twin arginine translocation system protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D HELO_3777 tatC; twin arginine translocation system protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D HELO_3021 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HELO_1318 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hel04122]
D HELO_1393 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HELO_2733 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_2007 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_1730 rhdA; thiosulfate sulfurtransferase RhdA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HELO_1746 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HELO_2624 tusB; sulfur relay complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HELO_2625 tusC; sulfur relay complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HELO_2626 tusD; sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HELO_2623 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HELO_3065 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HELO_2978 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HELO_2977 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HELO_1885 ThiF/MoeB family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HELO_2979 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HELO_2620 moaB; molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HELO_2727 thiI; tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HELO_4285 ThiS domain protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:hel03018]
D HELO_1695 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HELO_1989 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HELO_3033 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HELO_3749 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HELO_4133 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HELO_2451 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HELO_3528 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HELO_3192 rhlD; ATP-dependent RNA helicase RhlD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HELO_3785 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HELO_2975 RNase J domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HELO_4159 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HELO_2875 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HELO_3364 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HELO_3780 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HELO_4126 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hel03030]
D HELO_3441 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2740 sensor box / exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_3545 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2691 dnaQ; DNA polymerase 3 epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_3789 dnaE; DNA polymerase 3 alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HELO_2055 dnaX; DNA polymerase 3 tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HELO_2004 holB; DNA polymerase 3 delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HELO_2225 holA; DNA polymerase 3 delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HELO_1355 holC; DNA polymerase 3 chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HELO_1002 dnaN; DNA polymerase 3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HELO_3522 dnaB1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HELO_4022 dnaB2; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HELO_3472 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HELO_4037 homolog to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_1265 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2110 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2692 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HELO_3790 rnhB; ribonuclease H2 K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HELO_4002 polA; DNA polymerase 1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HELO_1198 ligB; DNA ligase (NAD) LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_3719 ligA; DNA ligase (NAD) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hel03410]
D HELO_2730 nth; endonuclease 3 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HELO_2992 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HELO_4019 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HELO_3823 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HELO_1507 AlkA/HTH domain protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HELO_3881 GNAT family acetyltransferase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HELO_3035 xthA1; apurinic/apyrimidinic DNA endonuclease XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HELO_4394 xthA2; apurinic/apyrimidinic DNA endonuclease XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HELO_4002 polA; DNA polymerase 1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HELO_3855 DHH/RecJ family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HELO_1198 ligB; DNA ligase (NAD) LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_3719 ligA; DNA ligase (NAD) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hel03420]
D HELO_2213 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HELO_1263 uvrA; UvrABC system protein UvrA K03701 uvrA; excinuclease ABC subunit A
D HELO_2546 uvrB; UvrABC system protein UvrB K03702 uvrB; excinuclease ABC subunit B
D HELO_2811 uvrC; UvrABC system protein UvrC K03703 uvrC; excinuclease ABC subunit C
D HELO_4426 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HELO_2006 UvrD/REP-type helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HELO_4002 polA; DNA polymerase 1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HELO_1198 ligB; DNA ligase (NAD) LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_3719 ligA; DNA ligase (NAD) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_3904 helicase domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:hel03430]
D HELO_3747 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HELO_3366 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HELO_4426 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HELO_2006 UvrD/REP-type helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HELO_3871 sbcB; exodeoxyribonuclease 1 K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HELO_1621 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HELO_1082 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HELO_3855 DHH/RecJ family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HELO_4037 homolog to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_1265 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2110 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_3789 dnaE; DNA polymerase 3 alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HELO_1002 dnaN; DNA polymerase 3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HELO_2055 dnaX; DNA polymerase 3 tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HELO_2225 holA; DNA polymerase 3 delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HELO_2004 holB; DNA polymerase 3 delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HELO_3441 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2740 sensor box / exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_3545 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2691 dnaQ; DNA polymerase 3 epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_1355 holC; DNA polymerase 3 chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HELO_1198 ligB; DNA ligase (NAD) LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_3719 ligA; DNA ligase (NAD) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_2662 probable methyltransferase (homolog to DNA-adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:hel03440]
D HELO_3855 DHH/RecJ family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HELO_4037 homolog to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_1265 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2110 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_1003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HELO_3018 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HELO_2057 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HELO_3745 recA; protein RecA K03553 recA; recombination protein RecA
D HELO_4002 polA; DNA polymerase 1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HELO_2561 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HELO_2562 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HELO_2560 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HELO_4410 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HELO_1487 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HELO_1488 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HELO_1486 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HELO_3789 dnaE; DNA polymerase 3 alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HELO_1002 dnaN; DNA polymerase 3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HELO_2055 dnaX; DNA polymerase 3 tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HELO_2225 holA; DNA polymerase 3 delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HELO_2004 holB; DNA polymerase 3 delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HELO_3441 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2740 sensor box / exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_3545 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2691 dnaQ; DNA polymerase 3 epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_1355 holC; DNA polymerase 3 chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HELO_3765 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
D HELO_3870 peptidase M16 family protein K01408 IDE; insulysin [EC:3.4.24.56]
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hel02010]
D HELO_3382 cysP; ABC-type transport system periplasmic substrate-binding protein (probable substrate thiosulfate) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D HELO_3383 cysT; ABC-type transport system permease protein (probable substrate sulfate/thiosulfate) K02046 cysU; sulfate/thiosulfate transport system permease protein
D HELO_3384 cysW; ABC-type transport system permease protein (probable substrate sulfate/thiosulfate) K02047 cysW; sulfate/thiosulfate transport system permease protein
D HELO_3385 cysA; ABC-type transport system ATP-binding protein (probable substrate sulfate/thiosulfate) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HELO_2683 THI5 family protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D HELO_2061 modA; ABC-type transport system periplasmic substrate-binding protein (probable substrate molybdate) K02020 modA; molybdate transport system substrate-binding protein
D HELO_2062 modB; ABC-type transport system permease protein (probable substrate molybdate) K02018 modB; molybdate transport system permease protein
D HELO_2063 modC; ABC-type transport system ATP-binding protein (probable substrate molybdate) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HELO_1628 ABC-type transport system periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HELO_4001 futA; ABC-type transport system periplasmic substrate-binding protein (probable substrate iron) K02012 afuA; iron(III) transport system substrate-binding protein
D HELO_3999 futB; ABC-type transport system permease protein (probable substrate iron) K02011 afuB; iron(III) transport system permease protein
D HELO_4000 futC; ABC-type transport system ATP-binding protein (probable substrate iron) K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HELO_1890 spuE1; ABC-type transport system periplasmic substrate-binding protein (probable substrate polyamine) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HELO_1892 spuE2; ABC-type transport system periplasmic substrate-binding protein (probable substrate polyamine) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HELO_1889 spuH; ABC-type transport system permease protein (probable substrate polyamine) K11070 potC; spermidine/putrescine transport system permease protein
D HELO_1888 spuG; ABC-type transport system permease protein (probable substrate polyamine) K11071 potB; spermidine/putrescine transport system permease protein
D HELO_1887 spuF; ABC-type transport system ATP-binding protein (probable substrate polyamine) K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HELO_1458 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_2755 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_4388 gbtC; ABC-type transport system periplasmic substrate-binding protein (probable substrate glycine betaine) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_1862 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_2762 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_1568 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_1125 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_3357 gbtB; ABC-type transport system permease protein (probable substrate glycine betaine) K02001 proW; glycine betaine/proline transport system permease protein
D HELO_3356 gbtA; ABC-type transport system ATP-binding protein (probable substrate glycine betaine) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D HELO_2366 osmX; ABC-type transport system periplasmic substrate-binding protein (probable substrate osmolyte) K05845 opuC; osmoprotectant transport system substrate-binding protein
D HELO_2367 osmW; ABC-type transport system permease protein (probable substrate osmolyte) K05846 opuBD; osmoprotectant transport system permease protein
D HELO_2369 osmY; ABC-type transport system permease protein (probable substrate osmolyte) K05846 opuBD; osmoprotectant transport system permease protein
D HELO_2368 osmV; ABC-type transport system ATP-binding protein (probable substrate osmolyte) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HELO_3685 malE; ABC-type transport system periplasmic substrate-binding protein (probable substrate maltose) K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D HELO_3684 malF; ABC-type transport system permease protein (probable substrate maltose) K10109 malF; maltose/maltodextrin transport system permease protein
D HELO_3683 malG; ABC-type transport system permease protein (probable substrate maltose) K10110 malG; maltose/maltodextrin transport system permease protein
D HELO_3679 thuK2; ABC-type transport system ATP-binding protein (probable substrate trehalose) K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_1162 ABC-type transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_2486 ABC-type transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_2791 ABC-type transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_3678 thuK1; ABC-type transport system ATP-binding protein (probable substrate trehalose) K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_3091 gtsD; ABC-type transport system ATP-binding protein (probable substrate glucose) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_1158 ABC-type transport system periplasmic substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HELO_1159 ABC-type transport system permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HELO_1160 ABC-type transport system permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HELO_2483 ABC-type transport system periplasmic substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D HELO_2484 ABC-type transport system permease protein K10228 smoF; polyol transport system permease protein
D HELO_2485 ABC-type transport system permease protein K10229 smoG; polyol transport system permease protein
D HELO_3674 thuE; ABC-type transport system periplasmic substrate-binding protein (probable substrate trehalose) K10236 thuE; trehalose/maltose transport system substrate-binding protein
D HELO_3675 thuF; ABC-type transport system permease protein (probable substrate trehalose) K10237 thuF; trehalose/maltose transport system permease protein
D HELO_3676 thuG; ABC-type transport system permease protein (probable substrate trehalose) K10238 thuG; trehalose/maltose transport system permease protein
D HELO_1932 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D HELO_1931 mlaD; ABC-type transport system periplasmic substrate-binding protein (probable substrate phospholipid) K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HELO_1930 mlaE; probable ABC-type transport system permease protein (probable substrate phospholipid) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HELO_1933 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D HELO_1929 mlaF; ABC-type transport system ATP-binding protein (probable substrate phospholipid) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HELO_3094 gtsA; ABC-type transport system periplasmic substrate-binding protein (probable substrate glucose) K17315 gtsA; glucose/mannose transport system substrate-binding protein
D HELO_3093 gtsB; ABC-type transport system permease protein (probable substrate glucose) K17316 gtsB; glucose/mannose transport system permease protein
D HELO_3092 gtsC; ABC-type transport system permease protein (probable substrate glucose) K17317 gtsC; glucose/mannose transport system permease protein
D HELO_3493 rbsB; ABC-type transport system periplasmic substrate-binding protein (probable substrate ribose) K10439 rbsB; ribose transport system substrate-binding protein
D HELO_3495 rbsC; ABC-type transport system permease protein (probable substrate ribose) K10440 rbsC; ribose transport system permease protein
D HELO_3494 rbsA; ABC-type transport system ATP-binding protein (probable substrate ribose) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HELO_2787 araF; ABC-type transport system periplasmic substrate-binding protein (probable substrate L-arabinose) K10537 araF; L-arabinose transport system substrate-binding protein
D HELO_2785 araH; ABC-type transport system permease protein (probable substrate L-arabinose) K10538 araH; L-arabinose transport system permease protein
D HELO_2786 araG; ABC-type transport system ATP-binding protein (probable substrate L-arabinose) K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D HELO_1194 ABC-type transport system periplasmic substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D HELO_3970 ABC-type transport system periplasmic substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D HELO_1193 ABC-type transport system permease protein K17203 eryF; erythritol transport system permease protein
D HELO_3968 ABC-type transport system permease protein K17203 eryF; erythritol transport system permease protein
D HELO_1192 ABC-type transport system ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D HELO_3969 ABC-type transport system ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D HELO_2985 ABC-type transport system periplasmic substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D HELO_2988 ABC-type transport system permease protein K17322 glpP; glycerol transport system permease protein
D HELO_2987 ABC-type transport system permease protein K17323 glpQ; glycerol transport system permease protein
D HELO_2990 ABC-type transport system ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D HELO_2989 ABC-type transport system ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D HELO_1850 ugpB; ABC-type transport system periplasmic substrate-binding protein (probable substrate sn-glycerol-3-phosphate) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D HELO_1849 ugpA; ABC-type transport system permease protein (probable substrate sn-glycerol-3-phosphate) K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D HELO_1848 ugpE; ABC-type transport system permease protein (probable substrate sn-glycerol-3-phosphate) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D HELO_1847 upgC; ABC-type transport system ATP-binding protein (probable substrate sn-glycerol-3-phosphate) K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D HELO_4423 pstS; ABC-type transport system periplasmic substrate-binding protein (probable substrate phosphate) K02040 pstS; phosphate transport system substrate-binding protein
D HELO_2126 ABC-type transport system periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HELO_4422 pstC; ABC-type transport system permease protein (probable substrate phosphate) K02037 pstC; phosphate transport system permease protein
D HELO_2127 ABC-type transport system permease protein K02037 pstC; phosphate transport system permease protein
D HELO_2128 ABC-type transport system permease protein K02038 pstA; phosphate transport system permease protein
D HELO_4421 pstA; ABC-type transport system permease protein (probable substrate phosphate) K02038 pstA; phosphate transport system permease protein
D HELO_2129 ABC-type transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HELO_4420 pstB; ABC-type transport system ATP-binding protein (probable substrate phosphate) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HELO_2137 ABC-type transport system periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HELO_3005 ABC-type transport system periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HELO_3639 ABC-type transport system periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HELO_2134 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_2135 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_3007 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_3008 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_3641 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_2136 ABC-type transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HELO_3006 ABC-type transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HELO_3640 ABC-type transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HELO_4458 glnH; ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine) K10036 glnH; glutamine transport system substrate-binding protein
D HELO_4457 glnP; ABC-type transport system permease protein (probable substrate glutamine) K10037 glnP; glutamine transport system permease protein
D HELO_4456 glnQ; ABC-type transport system ATP-binding protein (probable substrate glutamine) K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HELO_4319 aapJ; ABC-type transport system periplasmic substrate-binding protein AapJ K09969 aapJ; general L-amino acid transport system substrate-binding protein
D HELO_4318 aapQ; ABC-type transport system permease protein AapQ K09970 aapQ; general L-amino acid transport system permease protein
D HELO_4317 aapM; ABC-type transport system permease protein AapM K09971 aapM; general L-amino acid transport system permease protein
D HELO_4316 aapP; ABC-type transport system ATP-binding protein AapP K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HELO_1794 ABC-type transport system periplasmic substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D HELO_1795 ABC-type transport system permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D HELO_1796 ABC-type transport system ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D HELO_1548 ABC-type transport system periplasmic substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D HELO_1549 ABC-type transport system permease protein K10023 aotM; arginine/ornithine transport system permease protein
D HELO_1550 ABC-type transport system permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D HELO_1551 ABC-type transport system ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D HELO_1113 ABC-type transport system periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HELO_1115 ABC-type transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HELO_1114 ABC-type transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HELO_1117 ABC-type transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HELO_1116 ABC-type transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HELO_2999 metQ; ABC-type transport system periplasmic substrate-binding protein (probable substrate D-methionine) K02073 metQ; D-methionine transport system substrate-binding protein
D HELO_2998 metI; ABC-type transport system permease protein (probable substrate D-methionine) K02072 metI; D-methionine transport system permease protein
D HELO_2997 metN; ABC-type transport system ATP-binding protein (probable substrate D-methionine) K02071 metN; D-methionine transport system ATP-binding protein
D HELO_2271 ABC-type transport system periplasmic substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D HELO_2272 ABC-type transport system permease protein K11960 urtB; urea transport system permease protein
D HELO_2273 ABC-type transport system permease protein K11961 urtC; urea transport system permease protein
D HELO_2274 ABC-type transport system ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D HELO_2275 ABC-type transport system ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D HELO_3846 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3845 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3847 ABC-type transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D HELO_3848 ABC-type transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D HELO_3849 ABC-type transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HELO_2696 ABC-type transport system periplasmic substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D HELO_2697 ABC-type transport system permease protein K13894 yejB; microcin C transport system permease protein
D HELO_2698 ABC-type transport system permease protein K13895 yejE; microcin C transport system permease protein
D HELO_2699 ABC-type transport system ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D HELO_3347 ABC-type transport system periplasmic substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D HELO_3346 ABC-type transport system permease protein K23186 fepD; iron-siderophore transport system permease protein
D HELO_3345 ABC-type transport system permease protein K23187 fepG; iron-siderophore transport system permease protein
D HELO_3344 ABC-type transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D HELO_3313 fhuD; ABC-type transport system periplasmic substrate-binding protein (probable substrate hydroxamate iron) K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D HELO_3314 fhuB; ABC-type transport system permease protein (probable substrate hydroxamate iron) K23228 fhuB; ferric hydroxamate transport system permease protein
D HELO_3312 fhuC; ABC-type transport system ATP-binding protein (probable substrate hydroxamate iron) K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D HELO_4009 YodA family protein K09815 znuA; zinc transport system substrate-binding protein
D HELO_4010 znuA; ABC-type transport system periplasmic substrate-binding protein (probable substrate zinc) K09815 znuA; zinc transport system substrate-binding protein
D HELO_4012 znuB; ABC-type transport system permease protein (probable substrate zinc) K09816 znuB; zinc transport system permease protein
D HELO_4011 znuC; ABC-type transport system ATP-binding protein (probable substrate zinc) K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HELO_3342 ABC-type transport system periplasmic substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D HELO_3340 ABC-type transport system permease protein K11708 troC; manganese/zinc/iron transport system permease protein
D HELO_3339 ABC-type transport system permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D HELO_3341 ABC-type transport system ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D HELO_2394 homolog to capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D HELO_2392 ABC-type transport system permease protein K09688 kpsM; capsular polysaccharide transport system permease protein
D HELO_2393 ABC-type transport system ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D HELO_3597 ABC-type transport system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D HELO_3596C ABC-type transport system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D HELO_1976 lolC; ABC-type lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D HELO_1977 lolD; ABC-type lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HELO_3727 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D HELO_3728 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D HELO_3729 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HELO_3730 ccmA; heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HELO_1359 lptF; lipopolysaccharide export system permease protein LptF K07091 lptF; lipopolysaccharide export system permease protein
D HELO_1360 lptG; lipopolysaccharide export system permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein
D HELO_1924 lptB; lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HELO_3833 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HELO_3834 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HELO_2834 ABC-type transport system ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HELO_2833 ABC-type transport system ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HELO_1980 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HELO_2047 HlyB family toxin translocation ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HELO_1654 ABC-type transport system ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D HELO_1470 ABC-type transport system ATP-binding/permease protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D HELO_2459 cydC; ABC-type transport system ATP-binding/permease protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HELO_2458 cydD; ABC-type transport system ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HELO_4250 macB; ABC-type transport system ATP-binding/permease protein (probable substrate macrolide) K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HELO_3325 yojI; ABC-type transport system ATP-binding/permease protein (probable substrate microcin) K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:hel02060]
D HELO_3099 nagE; phosphotransferase system component EIICB, N-acetylglucosamine-specific K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HELO_3698 fruB; multiphosphoryl transfer protein, fructose-specific K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D HELO_3100 nagF; multiphosphoryl transfer protein, N-acetylglucosamine-specific K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D HELO_3696 fruA; phosphotransferase system component EIIBC, fructose-specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HELO_3697 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HELO_1696 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HELO_1919 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D HELO_1921 ptsN; nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hel03070]
D HELO_3128 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1472 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_3219 gspD2; general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D HELO_2770 gspD1; general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D HELO_3218 uncharacterized protein K02452 gspC; general secretion pathway protein C
D HELO_3221 gspF2; general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D HELO_2778 gspF1; general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D HELO_3222 gspG2; general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D HELO_2777 gspG1; general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D HELO_3223 gspH2; general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D HELO_2776 gspH1; general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D HELO_3224 gspI2; general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D HELO_2775A gspI1; general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D HELO_3225 gspJ2; general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D HELO_2775 gspJ1; general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D HELO_3226 gspK2; general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D HELO_2774 gspK1; general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D HELO_2773 gspL; general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L
D HELO_2772 gspM; general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D HELO_3220 gspE2; general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HELO_2779 gspE1; general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HELO_1400 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HELO_1399 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HELO_1223 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HELO_4140 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HELO_1256 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HELO_1401 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HELO_4471 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HELO_1971 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HELO_3835 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HELO_1032 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HELO_3864 ffh; SRP54-type signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HELO_3775 tatA; twin arginine translocation system protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D HELO_3776 tatB; twin arginine translocation system protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D HELO_3777 tatC; twin arginine translocation system protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D HELO_3301 VirB5 family protein K03200 virB5; type IV secretion system protein VirB5
D HELO_3300 VirB6 family protein K03201 virB6; type IV secretion system protein VirB6
D HELO_4077 vgr3; T6SS-related Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D HELO_2928 vgr2; T6SS-related Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D HELO_2907 vgr1; T6SS-related Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D HELO_2929 hcp1; T6SS-related Hcp family protein K11903 hcp; type VI secretion system secreted protein Hcp
D HELO_4078 hcp2; T6SS-related Hcp family protein K11903 hcp; type VI secretion system secreted protein Hcp
D HELO_2917 vasD; T6SS cluster protein VasD K11906 vasD; type VI secretion system protein VasD
D HELO_2910 vasK; T6SS cluster protein VasK K11891 impL; type VI secretion system protein ImpL
D HELO_2915 vasF; T6SS cluster protein VasF K11892 impK; type VI secretion system protein ImpK
D HELO_2914 clpV; T6SS cluster protein ClpV K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hel02020]
D HELO_4417 phoR; PAS domain protein / sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HELO_4416 phoB; response regulator/HTH domain transcription regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HELO_1560 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HELO_2384 phoD family phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HELO_4423 pstS; ABC-type transport system periplasmic substrate-binding protein (probable substrate phosphate) K02040 pstS; phosphate transport system substrate-binding protein
D HELO_2126 ABC-type transport system periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HELO_3887 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D HELO_3888 response regulator/HTH domain transcription regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D HELO_3026 degP1; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HELO_3689 baeS; sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HELO_3690 baeR; response regulator/HTH domain transcription regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D HELO_1576 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HELO_1575 response regulator/HTH domain transcription regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D HELO_4345A flhD; flagellar transcription regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HELO_4345 flhC; flagellar transcription regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HELO_4352 fliC1; flagellin K02406 fliC; flagellin
D HELO_4353 fliC2; flagellin K02406 fliC; flagellin
D HELO_4331 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HELO_4344 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D HELO_1627 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D HELO_2265 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D HELO_2266 response regulator/HTH domain transcription regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D HELO_1626 response regulator/HTH domain transcription regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D HELO_3414 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_1623 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_2270 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_1137 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_3290 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_1045 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_2269 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1624 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1044 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1136 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_3415 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1625 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_2268 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_1135 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_1043 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_3291 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_3416 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_2509 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HELO_1001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HELO_4226 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D HELO_3716 PAS domain protein / sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D HELO_3715 response regulator domain protein K11615 malR; two-component system, CitB family, response regulator MalR
D HELO_3817 maeA; malic enzyme (NAD) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HELO_3717 CCS family transport protein (probable substrate 2-hydroxycarboxylate) K11616 maeN; malate:Na+ symporter
D HELO_2855 narX; sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D HELO_2856 narL; response regulator/HTH domain transcription regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D HELO_2854 narG; respiratory nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HELO_2853 narH; respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HELO_2851 narI; respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HELO_2852 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D HELO_3015 sensor histidine kinase / response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HELO_2810 uvrY; response regulator/HTH domain transcription regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D HELO_3741 csrA; RNA-binding regulator protein CsrA K03563 csrA; carbon storage regulator
D HELO_1076 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1080 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_2151A homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1077 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_2151F homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1078 probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_2151D probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_1079 outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_2151E outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_3806 glnD; bifunctional uridylyltransferase/uridylyl-removing enzyme GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D HELO_1128 ntrB; PAS domain protein / sensor histidine kinase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HELO_1129 ntrC; response regulator/sigma-54-interact/HTH domain transcription regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HELO_1126 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1537 GlnA domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1891 spuB; GlnA/PuuA domain protein SpuB K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1902 puuA; glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_3987 AtoE family transport protein K02106 atoE; short-chain fatty acids transporter
D HELO_3959 AtoE family transport protein K02106 atoE; short-chain fatty acids transporter
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_1218 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D HELO_1217 response regulator/sigma-54-interact/HTH domain transcription regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D HELO_1923 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HELO_2968 pilA; fimbrial protein PilA K02650 pilA; type IV pilus assembly protein PilA
D HELO_1618 glrK; sensor kinase protein GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HELO_1620 glrR; response regulator/sigma-54-interact/HTH domain transcription regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D HELO_4337 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HELO_4340 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D HELO_4356 tar1; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D HELO_4339 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HELO_4338 methyl-accepting chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D HELO_4341 cheW; purine-binding taxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HELO_4342 cheA; taxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HELO_4335A cheY; chemotaxis-specific response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HELO_4336 cheB; chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HELO_3558 TRAP transporter large transmembrane protein (probable substrate L-fuconate) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_3706 TRAP transporter large transmembrane protein (probable substrate (S)-2-acetolactate) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_2939 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_4276 teaC; TRAP transporter large transmembrane protein TeaC (substrate ectoine) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_1150 TRAP transporter large transmembrane protein (probable substrate D-mannonate/L-gulonate) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_1546 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_1502 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_2033 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_2706 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HELO_2707 response regulator/HTH domain transcription regulator K15012 regA; two-component system, response regulator RegA
D HELO_1943 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HELO_1944 petB; ubiquinol--cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HELO_1945 petC; ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HELO_3536 ccoN; cbb3-type cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D HELO_3537 ccoO; cbb3-type cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D HELO_3538 ccoQ; cbb3-type cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D HELO_3539 ccoP; cbb3-type cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D HELO_2456 cydA; cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HELO_2457 cydB; cytochrome bd ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HELO_3128 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1472 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1983A protein-tyrosine phosphatase domain protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D HELO_2815 sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D HELO_4382A flgM; flagellin synthesis regulator FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D HELO_1943 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hel02024]
D HELO_2343 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HELO_3364 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HELO_3375 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HELO_3374 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HELO_4098A alpha/beta hydrolase fold protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D HELO_3781 aroF2; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HELO_3030 aroF1; phospho-2-dehydro-3-heoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HELO_1064 PhzF family protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D HELO_1576 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HELO_1575 response regulator/HTH domain transcription regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D HELO_1618 glrK; sensor kinase protein GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HELO_1620 glrR; response regulator/sigma-54-interact/HTH domain transcription regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D HELO_4345A flhD; flagellar transcription regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HELO_4345 flhC; flagellar transcription regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HELO_1175 APC family transport protein K20265 gadC; glutamate:GABA antiporter
D HELO_3648 LsrG family protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D HELO_2900 ABC-type transport system periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HELO_2959 ABC-type transport system periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HELO_2897 ABC-type transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HELO_2898 ABC-type transport system permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HELO_2896 ABC-type transport system ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HELO_1113 ABC-type transport system periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HELO_1115 ABC-type transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HELO_1114 ABC-type transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HELO_1117 ABC-type transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HELO_1116 ABC-type transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HELO_2118 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HELO_1088 ribA; GTP cyclohydrolase 2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HELO_3591 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HELO_3846 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3845 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3847 ABC-type transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D HELO_3848 ABC-type transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D HELO_3849 ABC-type transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HELO_2585 ABC-type transport system periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HELO_2584 ABC-type transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HELO_2583 ABC-type transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HELO_2582 ABC-type transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HELO_2581 ABC-type transport system ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HELO_4471 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HELO_1223 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HELO_4140 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HELO_1256 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HELO_1401 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HELO_1971 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HELO_3835 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HELO_1032 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HELO_3864 ffh; SRP54-type signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hel02030]
D HELO_4340 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D HELO_4356 tar1; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D HELO_4339 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HELO_4338 methyl-accepting chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D HELO_3685 malE; ABC-type transport system periplasmic substrate-binding protein (probable substrate maltose) K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D HELO_3493 rbsB; ABC-type transport system periplasmic substrate-binding protein (probable substrate ribose) K10439 rbsB; ribose transport system substrate-binding protein
D HELO_4342 cheA; taxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HELO_4341 cheW; purine-binding taxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HELO_4335A cheY; chemotaxis-specific response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HELO_4335 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HELO_4336 cheB; chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HELO_4337 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HELO_4360 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HELO_4366 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HELO_4366A fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HELO_4344 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D HELO_4343 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hel02040]
D HELO_4358 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HELO_4359 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HELO_4360 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HELO_4361 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HELO_4362 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HELO_4363 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D HELO_4364 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D HELO_4365 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HELO_4366 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HELO_4366A fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HELO_4367 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HELO_4368 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HELO_4369 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HELO_4370 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HELO_4332 flhE; flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D HELO_4333 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HELO_4334 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HELO_4382 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HELO_4381 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HELO_4380 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HELO_4379 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HELO_4378 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HELO_4377 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HELO_4376 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HELO_4375 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HELO_4374 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HELO_4373 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HELO_4372 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HELO_4371 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HELO_4352 fliC1; flagellin K02406 fliC; flagellin
D HELO_4353 fliC2; flagellin K02406 fliC; flagellin
D HELO_4354 fliD2; flagellar capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HELO_4355 fliD1; flagellar capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HELO_4349 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D HELO_4348 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D HELO_4344 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D HELO_4343 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HELO_4382A flgM; flagellin synthesis regulator FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HELO_4383 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HELO_3471 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D HELO_4345A flhD; flagellar transcription regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HELO_4345 flhC; flagellar transcription regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HELO_1923 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HELO_4331 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HELO_3749 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D HELO_2605 metH; methionine synthase, cobalamin-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hel01501]
D HELO_2304 major facilitator superfamily transport protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HELO_2709 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HELO_1443 ampR; LysR family transcription regulator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D HELO_3846 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3845 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3847 ABC-type transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D HELO_3848 ABC-type transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D HELO_3849 ABC-type transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HELO_1444 blaA; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HELO_3124 TetR family transcription regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D HELO_2037 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_3127 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_2036 HAE1 family transport protein K18138 acrB; multidrug efflux pump
D HELO_3128 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1472 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_3761 peptidoglycan transglycosylase / transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HELO_2197 mrdA; probable transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HELO_1955 ftsI; peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hel01502]
D HELO_4226 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D HELO_1964 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HELO_3609 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HELO_1957 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HELO_1958 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HELO_1962 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hel01503]
D HELO_1573 EptA family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D HELO_1651 DUF306 domain protein K06079 cutF; copper homeostasis protein (lipoprotein)
D HELO_3367 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HELO_4192 hydrolase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HELO_3026 degP1; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HELO_4264 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HELO_2037 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_3127 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_2036 HAE1 family transport protein K18138 acrB; multidrug efflux pump
D HELO_3128 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1472 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_3792 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hel01000]
C 01001 Protein kinases [BR:hel01001]
D HELO_4417 phoR; PAS domain protein / sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HELO_3887 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D HELO_3689 baeS; sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HELO_1576 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HELO_1627 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D HELO_2265 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D HELO_4320 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HELO_2855 narX; sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D HELO_3015 sensor histidine kinase / response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HELO_3716 PAS domain protein / sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D HELO_1128 ntrB; PAS domain protein / sensor histidine kinase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HELO_1618 glrK; sensor kinase protein GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HELO_1218 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D HELO_1072 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D HELO_4342 cheA; taxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HELO_2706 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HELO_2815 sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:hel01009]
D HELO_1199 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HELO_3424 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D HELO_1722 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:hel01002]
D HELO_1318 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HELO_2710 pilD; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HELO_1630 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HELO_3173 peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase
D HELO_1903 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD K07010 K07010; putative glutamine amidotransferase
D HELO_2047 HlyB family toxin translocation ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HELO_3079 NlpC domain protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HELO_2244 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HELO_3753 gltB; glutamate synthase (NADP) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HELO_3101 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HELO_4435 glmS; glutamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HELO_3670 glyoxalase K05520 yhbO; deglycase [EC:3.5.1.124]
D HELO_2212 homolog to L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK
D HELO_3209 YcbB family protein K21470 ycbB; L,D-transpeptidase YcbB
D HELO_3437 pepN; aminopeptidase PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HELO_1213 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D HELO_4226 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D HELO_3870 peptidase M16 family protein K01408 IDE; insulysin [EC:3.4.24.56]
D HELO_1358 pepA; aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HELO_3462 peptidase M19 family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HELO_2024 glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D HELO_3810 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HELO_3994 pepD; non-specific dipeptidase, cytosolic K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HELO_1302 probable amidase (homolog to N-carbamoyl-L-amino acid hydrolase) K02083 allC; allantoate deiminase [EC:3.5.3.9]
D HELO_3197 peptidase M23 family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HELO_3805 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HELO_1025 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HELO_1131 peptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HELO_4144 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HELO_2012 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HELO_3583 bepA; beta-barrel assembly-enhancing protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D HELO_3797 rseP; RseA-cleaving protease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HELO_1577 MtfA family protein K09933 mtfA; MtfA peptidase
D HELO_3026 degP1; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HELO_1938 degP2; serine endoprotease DegP K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D HELO_2064 peptidase S9 family protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D HELO_2201 dacA1; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HELO_3978 peptidase S13 family protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HELO_2346 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HELO_2348 lon1; ATP-dependent protease Lon K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HELO_3584 lon2; ATP-dependent protease Lon K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HELO_3731 homolog to LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HELO_2972 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HELO_4093 umuD2; DNA polymerase 5 associated protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D HELO_2023 umuD1; DNA polymerase 5 associated protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D HELO_3021 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HELO_1028 ctpA; CtpA family serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HELO_1872 prc; C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HELO_1992 peptidase S49 family protein K04773 sppA; protease IV [EC:3.4.21.-]
D HELO_2688 sohB; probable protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D HELO_1809 peptidase S54 family protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D HELO_1647 ldcA; murein tetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D HELO_3768 hslV; ATP-dependent HslUV protease proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D HELO_2027 homolog to gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_3381 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HELO_2445 peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HELO_1635 yhbV; peptidase U32 family protein YhbV K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D HELO_1636 peptidase U32 family protein K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D HELO_1918 tldE; metalloprotease TldE K03592 pmbA; PmbA protein
D HELO_1916 tldD; metalloprotease TldD K03568 tldD; TldD protein
D HELO_3361 hflC; modulator of FtsH protease HflC K04087 hflC; modulator of FtsH protease HflC
D HELO_3362 hflK; modulator of FtsH protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:hel01003]
D HELO_3105 probable glycosyltransferase, type 1 K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D HELO_3463 mtgA; biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HELO_3761 peptidoglycan transglycosylase / transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HELO_4098A alpha/beta hydrolase fold protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D HELO_3146 opgH; glucan biosynthesis glucosyltransferase OpgH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hel01005]
D HELO_3792 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HELO_3791 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HELO_1968 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HELO_3794 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HELO_2354 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HELO_1981 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HELO_3144 probable acyltransferase (homolog to lipid A biosynthesis lauroyl acyltransferase) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HELO_3608 lpxP; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HELO_3273 LpxT family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D HELO_2700 DUF2219 family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D HELO_1019 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HELO_1573 EptA family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D HELO_1016A kdkA; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D HELO_3750 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HELO_1983 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HELO_1927 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HELO_1928 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HELO_1012 waaF; ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D HELO_3274 uncharacterized protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D HELO_1017 opsX; ADP-heptose--LPS heptosyltransferase OpsX K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D HELO_1949 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HELO_1005 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HELO_1018 hldE; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HELO_1011 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hel01011]
D HELO_1935 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HELO_1984 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HELO_1963 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HELO_1959 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HELO_1956 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HELO_1964 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HELO_3609 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HELO_3051 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HELO_1647 ldcA; murein tetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D HELO_1958 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HELO_1962 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HELO_4438 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HELO_2531 PAP2 domain protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HELO_1315 murJ; probable lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HELO_3761 peptidoglycan transglycosylase / transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HELO_2197 mrdA; probable transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HELO_1955 ftsI; peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HELO_2201 dacA1; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HELO_3978 peptidase S13 family protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HELO_3463 mtgA; biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HELO_2212 homolog to L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK
D HELO_3209 YcbB family protein K21470 ycbB; L,D-transpeptidase YcbB
D HELO_4226 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D HELO_3079 NlpC domain protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HELO_3197 peptidase M23 family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HELO_3428 slt; lytic murein transglycosylase Slt K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HELO_2199 mltB; lytic murein transglycosylase MltB K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D HELO_3506 MltB family protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D HELO_2695 MltD family protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D HELO_1671 mltF; lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D HELO_2002 UPF0755 family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HELO_2264 RlpA domain protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HELO_2200 RlpA domain protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HELO_3367 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HELO_4192 hydrolase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HELO_2312 amiD; N-acetylmuramoyl-L-alanine amidase AmiD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HELO_3573 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hel01004]
D HELO_1997 fabD; (acyl-carrier-protein) S-malonyltransferase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HELO_3983 fabY; 3-oxoacyl-(acyl-carrier-protein) synthase FabY K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D HELO_1269 fabB; 3-oxoacyl-(acyl-carrier-protein) synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HELO_2000 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HELO_2872 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2903 probable oxidoreductase (short-chain dehydrogenase family) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_1998 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_2334 bcdA; SDR family cyclic-diguanylate-sequestering protein BcdA K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HELO_1270 fabA; 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HELO_3793 fabZ; 3-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HELO_1411 fabV; enoyl-(acyl-carrier-protein) reductase (NADH) FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D HELO_3602 tesA; esterase TesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HELO_1669 tesB; acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HELO_4424 thioesterase domain protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D HELO_2722 fadM; long-chain acyl-CoA thioesterase FadM K12500 tesC; thioesterase III [EC:3.1.2.-]
D HELO_2142 acyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_3563 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HELO_2686 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D HELO_2535 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D HELO_2118 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HELO_2421 acyl-CoA synthetase family protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D HELO_3567 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HELO_1996 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HELO_3475 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HELO_1268 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HELO_3867 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:hel01008]
D HELO_2837 entB; enterobactin synthase component EntB K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D HELO_2836 entE; enterobactin synthase component EntE K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C 01006 Prenyltransferases [BR:hel01006]
D HELO_1083 ispA; farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HELO_1309 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HELO_3800 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HELO_3365 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HELO_4415 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HELO_2510 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HELO_3151 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:hel01007]
D HELO_3119 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HELO_2356 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HELO_4122 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HELO_4111 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HELO_3818 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HELO_2357 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HELO_3766 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HELO_2728 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HELO_1317 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HELO_1354 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HELO_2227 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HELO_3843 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HELO_2558 aspS; aspartate--tRNA(Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HELO_1386 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HELO_1010 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HELO_1009 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HELO_3370 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HELO_2307 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HELO_2514 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HELO_3743 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HELO_2518 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HELO_2519 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HELO_2252 phhC; aspartate aminotransferase / aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HELO_2013 alaA; alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HELO_2764 aruH; arginine--pyruvate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D HELO_3807 dapC; succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D HELO_4109 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2330 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HELO_2169 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HELO_2407 wcbT; probable aminotransferase WcbT K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HELO_1353 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HELO_1291 beta alanine--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D HELO_1415 aruC; multifunctional acetylornithine/succinylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HELO_3082 gabT1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D HELO_2589 ectB; diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D HELO_1904 spuC; putrescine aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D HELO_2155 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HELO_4464 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HELO_2877 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_1357 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HELO_2720 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hel00194]
D HELO_4443 atpC; F0F1-type ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HELO_4444 atpD; F0F1-type ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HELO_4445 atpG; F0F1-type ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HELO_4446 atpA; F0F1-type ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HELO_4447 atpH; F0F1-type ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HELO_4448 atpF; F0F1-type ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HELO_4449 atpE; F0F1-type ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HELO_4450 atpB; F0F1-type ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HELO_4451 atpI; ATP synthase c-ring assembly chaperone AtpI K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hel03000]
D HELO_4206 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_4398 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_2111 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_3930 AraC family transcription regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D HELO_3893 ada; bifunctional transcriptional activator / DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D HELO_1507 AlkA/HTH domain protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HELO_1772A PfpI/HTH domain protein (homolog to transcription regulator CdhR) K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D HELO_2754 cdhR; PfpI/HTH domain protein CdhR (homolog to transcription regulator CdhR) K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D HELO_2756 PfpI/HTH domain protein (homolog to transcription regulator CdhR) K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D HELO_2758 PfpI/HTH domain protein (homolog to transcription regulator CdhR) K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D HELO_3464 PfpI/HTH domain protein (homolog to transcription regulator CdhR) K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D HELO_1547 PfpI/HTH domain protein (homolog to transcription regulator CdhR) K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D HELO_3469 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_2944B LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_3208 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_3926 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_4310 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_4311 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_1570 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_1454 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_1608 LysR family transcription regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HELO_1336 ilvY; LysR family transcription regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D HELO_3957 LysR family transcription regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D HELO_3886 metR; LysR family transcription regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D HELO_1122 LysR family transcription regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D HELO_4409 LysR family transcription regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HELO_1648 argP; LysR family transcription regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D HELO_1736 cysB; LysR family transcription regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D HELO_1565 LysR family transcription regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D HELO_2536 LysR family transcription regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D HELO_1443 ampR; LysR family transcription regulator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D HELO_2902 LysR family transcription regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D HELO_2549 LysR family transcription regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D HELO_2580 LysR family transcription regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D HELO_1290 LysR family transcription regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D HELO_2205 LysR family transcription regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D HELO_4325 trpI; LysR family transcription regulator TrpI K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D HELO_3156 deoR; DeoR family transcription regulator DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D HELO_3002 glpR; DeoR family transcription regulator GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D HELO_1476 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HELO_3499 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HELO_1172 ptxS; LacI family transcription regulator PtxS K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D HELO_3203 cytR; LacI family transcription regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HELO_3699 fruR; LacI family transcription regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D HELO_2480 hutC; HutC family transcription regulator HutC K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D HELO_3103 HutC family transcription regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D HELO_3634 HutC family transcription regulator K03710 K03710; GntR family transcriptional regulator
D HELO_1219 lldR; GntR family transcription regulator LldR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HELO_3403 GntR family transcription regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HELO_1303 GntR family transcription regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HELO_2809 GntR family transcription regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D HELO_1775 GntR family transcription regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D HELO_1034 GntR family transcription regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D HELO_3179 YjiR family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D HELO_3939 GntR family transcription regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D HELO_2383 csiR; GntR family transcription regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D HELO_2028 GntR family transcription regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D HELO_1861 betI; TetR family transcription regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D HELO_2359 TetR family transcription regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D HELO_3831 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HELO_2467 TetR family transcription regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D HELO_1201 TetR family transcription regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D HELO_3124 TetR family transcription regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D HELO_2141 TetR family transcription regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D HELO_3901 TetR family transcription regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D HELO_1884 lrp; Lrp/AsnC family transcription regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HELO_2156 Lrp/AsnC family transcription regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HELO_3663 doeX; Lrp/AsnC family transcription regulator DoeX K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D HELO_3686 malT; MalT family transcription regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D HELO_1756 MarR family transcription regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D HELO_4440 MarR family transcription regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D HELO_1767 soxR; MerR family transcription regulator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D HELO_1272 MerR family transcription regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D HELO_4162 fur; Fur family transcription regulator Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HELO_1070 iclR; IclR family transcription regulator IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D HELO_3964 pcaR; IclR family transcription regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D HELO_2962 kdgR; IclR family transcription regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D HELO_1634 anr; Crp family transcription regulator Anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D HELO_1394 iscR; IscR family transcription regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D HELO_2133 arsR; ArsR family transcription regulator ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HELO_1499 ArsR family transcription regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HELO_2130 protein-tyrosine phosphatase domain protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D HELO_2687 ArsR family transcription regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D HELO_2311 PuuR family transcription regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D HELO_3270 PuuR family transcription regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D HELO_3561 mntR; DtxR family transcription regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D HELO_4427 RpiR family transcription regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D HELO_3638 hexR; RpiR family transcription regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D HELO_1221 birA; bifunctional biotin--acetyl-CoA-carboxylase ligase / transcription regulator K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HELO_2177 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HELO_2079 higA; antitoxin HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HELO_2913 vasH; GAF/sigma-54-interact/HTH domain transcription regulator VasH K11908 vasH; sigma-54 dependent transcriptional regulator
D HELO_1308A GAF/sigma-54-interact/HTH domain transcription regulator K12146 hyfR; hydrogenase-4 transcriptional activator
D HELO_2892 GAF/sigma-54-interact/HTH domain transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D HELO_1802 putA; bifunctional proline dehydrogenase / pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HELO_3840 bolA; morphogene BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D HELO_4452 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HELO_2305 rfaH; transcription elongation factor RfaH K05785 rfaH; transcriptional antiterminator RfaH
D HELO_3147 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HELO_2255 phhR; ACT/PAS/sigma-54-interact/HTH domain transcription regulator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D HELO_1404 rnk; Rnk family transcription regulator Rnk K06140 rnk; regulator of nucleoside diphosphate kinase
D HELO_3176 paiB; PaiB family protein K07734 paiB; transcriptional regulator
D HELO_1059 algH; UPF0301 family protein K07735 algH; putative transcriptional regulator
D HELO_4121 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D HELO_3592 nrdR; NrdR family transcription regulator NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:hel03021]
D HELO_3904 helicase domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D HELO_1261 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HELO_1229 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HELO_1230 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HELO_4404 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HELO_3471 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D HELO_3610 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D HELO_3029 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HELO_3198 RNA polymerase sigma-70 factor domain protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HELO_3832 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D HELO_1923 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HELO_4331 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HELO_1277 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D HELO_4138 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HELO_3588 nusB; transcription elongation factor NusB K03625 nusB; transcription antitermination protein NusB
D HELO_1224 nusG; transcription elongation factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HELO_1946 sspA; stringent starvation protein SspA K03599 sspA; stringent starvation protein A
D HELO_1947 sspB; stringent starvation protein SspB K03600 sspB; stringent starvation protein B
D HELO_2122 response regulator domain protein / PP2C domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D HELO_3028 rseA; anti-sigma-E factor RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D HELO_3027 rseB; sigma-E factor regulator protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D HELO_4121 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D HELO_4147 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D HELO_1709 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D HELO_3785 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hel03019]
D HELO_1989 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HELO_1914 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HELO_3020 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HELO_2975 RNase J domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HELO_3528 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HELO_1732 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HELO_3033 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HELO_2451 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HELO_3192 rhlD; ATP-dependent RNA helicase RhlD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HELO_3749 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HELO_4133 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HELO_3785 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HELO_4159 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HELO_2875 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HELO_3364 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HELO_3780 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HELO_4126 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HELO_1695 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HELO_3741 csrA; RNA-binding regulator protein CsrA K03563 csrA; carbon storage regulator
D HELO_2436 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A
D HELO_1920 RapZ family nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
D HELO_2119 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D HELO_2469 probable ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:hel03011]
D HELO_2716 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HELO_3804 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HELO_1242 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HELO_1260 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HELO_1253 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HELO_3526 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HELO_1232 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HELO_1250 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HELO_1942 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HELO_1235 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HELO_1259 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HELO_1231 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HELO_1258 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HELO_1249 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HELO_4134 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HELO_3863 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HELO_1245 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HELO_3525 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HELO_1240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HELO_1314 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HELO_3473 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HELO_1226 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HELO_1239 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HELO_1236 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HELO_1237 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HELO_1248 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HELO_1251 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HELO_3523 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HELO_1227 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HELO_1225 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HELO_1228 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HELO_1941 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HELO_1246 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HELO_1255 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HELO_1243 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HELO_1262 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HELO_1252 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HELO_3860 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HELO_2517 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HELO_1310 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HELO_1241 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HELO_1238 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HELO_1247 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HELO_1311 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HELO_3825 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HELO_1244 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HELO_1254 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HELO_3764 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HELO_1995 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HELO_3824 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HELO_4473 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HELO_2516 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HELO_1257 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HELO_1876 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HELO_RNA5S1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S4 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S2 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA16S1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S3 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S2 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA23S4 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S1 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S3 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hel03009]
D HELO_3020 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HELO_1732 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HELO_3019 era; ribosome biogenesis protein Era K03595 era; GTPase
D HELO_1312 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D HELO_4121 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D HELO_4138 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HELO_3588 nusB; transcription elongation factor NusB K03625 nusB; transcription antitermination protein NusB
D HELO_1224 nusG; transcription elongation factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HELO_2702 rsuA; 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HELO_3482 rsmA; ribosome biogenesis protein RsmA, 16S rRNA-methylating K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HELO_1374 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HELO_1708 rsmC; 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HELO_3836 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HELO_1033 rsmE; 16S rRNA (uracil(1498)-N(3))-methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HELO_3504 RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HELO_4454 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HELO_1953 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HELO_1952 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase RsmI K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HELO_3568 rsmJ; 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D HELO_2048 toxin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HELO_1632 rlmA; 23S rRNA (guanine(745)-N(1))-methyltransferase RlmA K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D HELO_3527 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HELO_4145 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D HELO_2196 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HELO_3822 probable S-adenosylmethionine-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HELO_4469 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D HELO_3046 rlmKL; ribosomal RNA large subunit methyltransferase RlmKL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D HELO_1744 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D HELO_1390 rlmN; dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HELO_3013 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HELO_1677 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HELO_1990 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HELO_1330 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HELO_3063A rluE; ribosomal large subunit pseudouridine synthase RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D HELO_3838 GNAT family acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HELO_3439 GNAT family acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HELO_1791 rimK; ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D HELO_1139 RimK family protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D HELO_2149 GNAT family acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D HELO_3862 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D HELO_2941 ribosomal protein S12 beta-methylthiolation protein YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D HELO_2179 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HELO_3398 prmB; 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D HELO_3068 roxA; 50S ribosomal protein L16 arginine hydroxylase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D HELO_1989 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D HELO_1914 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HELO_1060 yqgF; probable pre-16S rRNA nuclease YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HELO_3192 rhlD; ATP-dependent RNA helicase RhlD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HELO_1731 rsgA; ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HELO_1383 der; ribosome maturation GTPase Der K03977 engA; GTPase
D HELO_2014 rbgA; ribosome biogenesis GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D HELO_3363 hflX; GTPase HflX K03665 hflX; GTPase
D HELO_1378 tsaC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HELO_4405 spoT; bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HELO_4136 rbfA; ribosome biogenesis protein RbfA K02834 rbfA; ribosome-binding factor A
D HELO_4139 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D HELO_2195 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D HELO_3391 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D HELO_4146 yhbY; probable RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D HELO_1917 UPF0307 family protein K09889 yjgA; ribosome-associated protein
D HELO_3046A rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D HELO_1922 hpf; ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D HELO_1874 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D HELO_1994 DUF177 domain protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:hel03016]
D HELO_3931 beta-lactamase domain protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D HELO_3478 cca; multifunctional CCA processing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HELO_3119 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HELO_2307 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HELO_1317 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HELO_2227 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HELO_2728 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HELO_2356 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HELO_3766 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HELO_3843 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HELO_2558 aspS; aspartate--tRNA(Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HELO_3743 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HELO_2514 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HELO_3370 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HELO_2357 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HELO_1354 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HELO_1386 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HELO_2518 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HELO_2519 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HELO_4111 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HELO_3818 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HELO_4271 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HELO_3491 hinT; adenosine phosphoramidase HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HELO_4283 trmB; tRNA (guanine-N(7)-)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HELO_3982 probable S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HELO_3576 trmO; tRNA (adenine(37)-N6)-methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D HELO_2236 truA; tRNA pseudouridine synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HELO_4135 truB; tRNA pseudouridine synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HELO_3615 truD; tRNA pseudouridine synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D HELO_1393 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HELO_1378 tsaC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HELO_3365 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HELO_4470 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HELO_4455 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HELO_4105 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HELO_2386 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HELO_4472 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HELO_RNASEP RNAse P K01978 rnpB; M1 RNA
D HELO_2744 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D HELO_4395 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HELO_1140 rna; ribonuclease I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21]
D HELO_3104 rnb; exoribonuclease 2 K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D HELO_2058 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HELO_4407 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D HELO_3606 ABC-type transport system ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D HELO_3607 ABC-type transport system ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D HELO_1010 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HELO_1009 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HELO_4122 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HELO_1349 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HELO_2328 YbaK domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D HELO_1670 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HELO_3122 dusA; tRNA-dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D HELO_2178 dusB; tRNA-dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HELO_3737 dusC; tRNA-dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D HELO_3389 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HELO_1717 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D HELO_1716 cmoB; tRNA U34 carboxymethyltransferase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D HELO_1707 cmoM; tRNA cmo(5)U methyltransferase CmoM K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D HELO_3050 trmA; tRNA/tmRNA (uracil-C(5))-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D HELO_3861 trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HELO_2876 trmJ2; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D HELO_1396 trmJ1; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D HELO_4391 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HELO_1366 truC; tRNA pseudouridine synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D HELO_3065 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HELO_3544 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D HELO_1746 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HELO_2624 tusB; sulfur relay complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HELO_2625 tusC; sulfur relay complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HELO_2626 tusD; sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HELO_2623 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HELO_1392 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D HELO_2544 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D HELO_2439 miaE; tRNA-(ms(2)io(6)A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D HELO_3714 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D HELO_1403 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HELO_2444 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HELO_2443 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HELO_2018 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HELO_3369 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D HELO_4104 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D HELO_1402 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HELO_2727 thiI; tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HELO_3787 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HELO_3995 tmcA; tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D HELO_3569 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HELO_3474 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HELO_1365 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D HELO_3528 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HELO_4133 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hel03012]
D HELO_1143 yciH; SUI1 family protein YciH K03113 EIF1; translation initiation factor 1
D HELO_4137 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HELO_2515 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HELO_4273 yheS; ABC-type transport system ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HELO_3803 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HELO_1234 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HELO_1233 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HELO_1882 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HELO_3801 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D HELO_1883 prmC; peptide chain release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HELO_1875 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HELO_3060 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HELO_1727A efp; translation elongation factor P K02356 efp; elongation factor P
D HELO_1728 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D HELO_1727 epmB; lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D HELO_1750 epmC; elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D HELO_3844 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HELO_2420 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D HELO_1441 arfB; peptidyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:hel03110]
D HELO_3061 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D HELO_1332 clpB; molecular chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HELO_2347 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HELO_3769 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D HELO_3424 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D HELO_4159 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HELO_2875 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HELO_4158 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HELO_1085 djlA; co-chaperone protein DjlA K05801 djlA; DnaJ like chaperone protein
D HELO_1684 hslO; molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D HELO_4160 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HELO_1663 ibpA; small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA
D HELO_1683 hslR; heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D HELO_2874 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D HELO_3026 degP1; serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D HELO_4144 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HELO_4450 atpB; F0F1-type ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HELO_1078 probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_2151D probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_1032 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HELO_2472 DUF461 family protein K09796 pccA; periplasmic copper chaperone A
D HELO_2355 ppiB; CLD peptidyl-prolyl cis-trans isomerase PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HELO_2350 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D HELO_4278 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D HELO_1319 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D HELO_3074 slyD1; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D HELO_2306 slyD2; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D HELO_2850 PpiC-type peptidyl-prolyl cis-trans isomerase family protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D HELO_3484 surA; PpiC-type peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D HELO_1735 trxA; thioredoxin K03671 TXN; thioredoxin
D HELO_3877 thioredoxin domain protein K05838 ybbN; putative thioredoxin
D HELO_2540 grxA; glutaredoxin K03674 grxA; glutaredoxin 1
D HELO_2745 grxD; glutaredoxin K07390 grxD; monothiol glutaredoxin
D HELO_4264 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HELO_1689 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D HELO_3858 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HELO_4064 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HELO_2182 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D HELO_3724 ccmG; thiol:disulfide interchange protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:hel04131]
D HELO_1391 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HELO_2734 ArsA family protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D HELO_4242 gapA1; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_2214 homolog to glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_4243 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_1605 pykA2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_3424 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D HELO_3908 major facilitator superfamily transport protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:hel03051]
D HELO_3424 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:hel03032]
D HELO_2692 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HELO_4206 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_4398 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_2111 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_4413 hupB3; HU-type DNA-binding protein HupB K05787 hupA; DNA-binding protein HU-alpha
D HELO_2349 hupB1; HU-type DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D HELO_4074 hupB2; HU-type DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D HELO_2520 ihfA; HU-type DNA-binding protein IhfA K04764 ihfA; integration host factor subunit alpha
D HELO_2867 ihfB; HU-type DNA-binding protein IhfB K05788 ihfB; integration host factor subunit beta
D HELO_1001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HELO_3522 dnaB1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HELO_4022 dnaB2; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HELO_2655 homolog to DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D HELO_3472 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HELO_4037 homolog to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_1265 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2110 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_3789 dnaE; DNA polymerase 3 alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HELO_1002 dnaN; DNA polymerase 3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HELO_1355 holC; DNA polymerase 3 chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HELO_2225 holA; DNA polymerase 3 delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HELO_2004 holB; DNA polymerase 3 delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HELO_3441 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2740 sensor box / exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_3545 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2691 dnaQ; DNA polymerase 3 epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2055 dnaX; DNA polymerase 3 tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HELO_3790 rnhB; ribonuclease H2 K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HELO_4002 polA; DNA polymerase 1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HELO_1198 ligB; DNA ligase (NAD) LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_3719 ligA; DNA ligase (NAD) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_2662 probable methyltransferase (homolog to DNA-adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HELO_2294 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D HELO_2721 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HELO_1004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HELO_1721 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HELO_1720 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HELO_2208 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HELO_4040 topB2; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D HELO_2301 topB1; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hel03036]
D HELO_4206 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_4398 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_2111 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_3020 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HELO_2976 H-NS domain protein K03746 hns; DNA-binding protein H-NS
D HELO_4413 hupB3; HU-type DNA-binding protein HupB K05787 hupA; DNA-binding protein HU-alpha
D HELO_2349 hupB1; HU-type DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D HELO_4074 hupB2; HU-type DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D HELO_2520 ihfA; HU-type DNA-binding protein IhfA K04764 ihfA; integration host factor subunit alpha
D HELO_2867 ihfB; HU-type DNA-binding protein IhfB K05788 ihfB; integration host factor subunit beta
D HELO_1001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HELO_3992 Dps domain protein K04047 dps; starvation-inducible DNA-binding protein
D HELO_2177 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HELO_3364 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HELO_1648 argP; LysR family transcription regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D HELO_1884 lrp; Lrp/AsnC family transcription regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HELO_2156 Lrp/AsnC family transcription regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HELO_2319 ndpA; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D HELO_3721 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D HELO_1675 scpA; segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D HELO_1676 scpB; segregation and condensation protein ScpB K06024 scpB; segregation and condensation protein B
D HELO_1966 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HELO_3618 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D HELO_3834 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HELO_1955 ftsI; peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HELO_3057 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HELO_1954 FtsL family protein K03586 ftsL; cell division protein FtsL
D HELO_1965 FtsQ family protein K03589 ftsQ; cell division protein FtsQ
D HELO_1961 ftsW; probable lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D HELO_3833 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HELO_1967 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HELO_3720 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D HELO_1023 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D HELO_3837 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D HELO_1421 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D HELO_1940 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D HELO_3367 amiC; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HELO_4192 hydrolase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HELO_2037 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_3127 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_3874 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D HELO_3873 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HELO_3872 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HELO_3831 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HELO_1910 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HELO_1911 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HELO_1912 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D HELO_2198 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D HELO_4453 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D HELO_2040 ParA domain protein K03496 parA; chromosome partitioning protein
D HELO_4452 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HELO_1721 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HELO_1720 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HELO_4455 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HELO_4454 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HELO_4261 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HELO_3859 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D HELO_2287 apbC; iron-sulfur cluster assembly protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HELO_4262 engB; probable GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hel03400]
D HELO_1506 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HELO_1271 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D HELO_2992 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HELO_4019 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HELO_2730 nth; endonuclease 3 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HELO_3904 helicase domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D HELO_1973 NUDIX family hydrolase / thiE domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HELO_3902 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HELO_3828 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HELO_3893 ada; bifunctional transcriptional activator / DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D HELO_1507 AlkA/HTH domain protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HELO_3881 GNAT family acetyltransferase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HELO_3823 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HELO_3035 xthA1; apurinic/apyrimidinic DNA endonuclease XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HELO_4394 xthA2; apurinic/apyrimidinic DNA endonuclease XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HELO_3184 nfi; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D HELO_3855 DHH/RecJ family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HELO_1198 ligB; DNA ligase (NAD) LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_3719 ligA; DNA ligase (NAD) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HELO_4002 polA; DNA polymerase 1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HELO_1263 uvrA; UvrABC system protein UvrA K03701 uvrA; excinuclease ABC subunit A
D HELO_2546 uvrB; UvrABC system protein UvrB K03702 uvrB; excinuclease ABC subunit B
D HELO_2811 uvrC; UvrABC system protein UvrC K03703 uvrC; excinuclease ABC subunit C
D HELO_4426 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HELO_2006 UvrD/REP-type helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HELO_1229 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HELO_1230 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HELO_1261 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HELO_4404 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HELO_2213 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HELO_3747 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HELO_3366 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HELO_3871 sbcB; exodeoxyribonuclease 1 K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HELO_1621 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HELO_1082 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HELO_3789 dnaE; DNA polymerase 3 alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HELO_1002 dnaN; DNA polymerase 3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HELO_1355 holC; DNA polymerase 3 chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HELO_2225 holA; DNA polymerase 3 delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HELO_2004 holB; DNA polymerase 3 delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HELO_3441 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2740 sensor box / exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_3545 exonuclease domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2691 dnaQ; DNA polymerase 3 epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HELO_2055 dnaX; DNA polymerase 3 tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HELO_4037 homolog to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_1265 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2110 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2662 probable methyltransferase (homolog to DNA-adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HELO_1487 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HELO_1488 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HELO_1486 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HELO_3745 recA; protein RecA K03553 recA; recombination protein RecA
D HELO_2561 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HELO_2562 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HELO_2560 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HELO_3765 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HELO_3186 sbcC; nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D HELO_3185 sbcD; nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D HELO_4106 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HELO_1003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HELO_4410 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HELO_3018 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HELO_2057 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HELO_4161 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HELO_2723 rdgC2; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D HELO_2109 rdgC1; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D HELO_1103 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HELO_1673 helicase domain protein K19789 radD; DNA repair protein RadD
D HELO_2721 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HELO_1004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HELO_2208 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HELO_4413 hupB3; HU-type DNA-binding protein HupB K05787 hupA; DNA-binding protein HU-alpha
D HELO_2349 hupB1; HU-type DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D HELO_4074 hupB2; HU-type DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D HELO_2177 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HELO_2520 ihfA; HU-type DNA-binding protein IhfA K04764 ihfA; integration host factor subunit alpha
D HELO_2867 ihfB; HU-type DNA-binding protein IhfB K05788 ihfB; integration host factor subunit beta
D HELO_2976 H-NS domain protein K03746 hns; DNA-binding protein H-NS
D HELO_2973 dinB; DNA polymerase 4 K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HELO_4092 umuC2; DNA polymerase 5 complex protein UmuC K03502 umuC; DNA polymerase V
D HELO_2022 umuC1; DNA polymerase 5 complex protein UmuC K03502 umuC; DNA polymerase V
D HELO_4093 umuD2; DNA polymerase 5 associated protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D HELO_2023 umuD1; DNA polymerase 5 associated protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D HELO_3731 homolog to LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HELO_2972 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HELO_3744 recX; RecX family transcription regulator RecX K03565 recX; regulatory protein
D HELO_4390 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D HELO_3032 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HELO_3889 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HELO_4433 nrdE; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HELO_3890 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HELO_4434 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:hel03029]
D HELO_1944 petB; ubiquinol--cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HELO_4137 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HELO_2515 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HELO_3803 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HELO_1234 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HELO_1233 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HELO_3019 era; ribosome biogenesis protein Era K03595 era; GTPase
D HELO_4111 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HELO_2227 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HELO_2558 aspS; aspartate--tRNA(Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HELO_3766 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HELO_1908 gatA; aspartyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HELO_1907 gatB; aspartyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HELO_1909 gatC; aspartyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HELO_3529 probable endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D HELO_4037 homolog to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_1265 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_2110 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HELO_3796 bamA; outer membrane protein assembly factor bamA K07277 SAM50; outer membrane protein insertion porin family
D HELO_4159 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HELO_4160 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HELO_2875 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HELO_2874 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D HELO_4158 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HELO_1393 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HELO_2745 grxD; glutaredoxin K07390 grxD; monothiol glutaredoxin
D HELO_2287 apbC; iron-sulfur cluster assembly protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HELO_2510 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HELO_3151 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HELO_2504 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D HELO_2509 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D HELO_4471 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HELO_2507 SURF1 domain protein K14998 SURF1; surfeit locus 1 family protein
D HELO_2473 SCO1 family protein K07152 SCO1; protein SCO1
D HELO_4279 SCO1 family protein K07152 SCO1; protein SCO1
D HELO_3424 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hel02000]
D HELO_2834 ABC-type transport system ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HELO_2833 ABC-type transport system ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HELO_1980 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HELO_2047 HlyB family toxin translocation ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HELO_1654 ABC-type transport system ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D HELO_3310 ABC-type transport system ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HELO_1621A ABC-type transport system ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HELO_1470 ABC-type transport system ATP-binding/permease protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D HELO_2459 cydC; ABC-type transport system ATP-binding/permease protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HELO_2458 cydD; ABC-type transport system ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HELO_4250 macB; ABC-type transport system ATP-binding/permease protein (probable substrate macrolide) K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HELO_3325 yojI; ABC-type transport system ATP-binding/permease protein (probable substrate microcin) K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D HELO_1753 ABC-type transport system ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HELO_3382 cysP; ABC-type transport system periplasmic substrate-binding protein (probable substrate thiosulfate) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D HELO_3383 cysT; ABC-type transport system permease protein (probable substrate sulfate/thiosulfate) K02046 cysU; sulfate/thiosulfate transport system permease protein
D HELO_3384 cysW; ABC-type transport system permease protein (probable substrate sulfate/thiosulfate) K02047 cysW; sulfate/thiosulfate transport system permease protein
D HELO_3385 cysA; ABC-type transport system ATP-binding protein (probable substrate sulfate/thiosulfate) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HELO_2061 modA; ABC-type transport system periplasmic substrate-binding protein (probable substrate molybdate) K02020 modA; molybdate transport system substrate-binding protein
D HELO_2062 modB; ABC-type transport system permease protein (probable substrate molybdate) K02018 modB; molybdate transport system permease protein
D HELO_2063 modC; ABC-type transport system ATP-binding protein (probable substrate molybdate) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HELO_1628 ABC-type transport system periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HELO_4001 futA; ABC-type transport system periplasmic substrate-binding protein (probable substrate iron) K02012 afuA; iron(III) transport system substrate-binding protein
D HELO_3999 futB; ABC-type transport system permease protein (probable substrate iron) K02011 afuB; iron(III) transport system permease protein
D HELO_4000 futC; ABC-type transport system ATP-binding protein (probable substrate iron) K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HELO_1890 spuE1; ABC-type transport system periplasmic substrate-binding protein (probable substrate polyamine) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HELO_1892 spuE2; ABC-type transport system periplasmic substrate-binding protein (probable substrate polyamine) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HELO_1889 spuH; ABC-type transport system permease protein (probable substrate polyamine) K11070 potC; spermidine/putrescine transport system permease protein
D HELO_1888 spuG; ABC-type transport system permease protein (probable substrate polyamine) K11071 potB; spermidine/putrescine transport system permease protein
D HELO_1887 spuF; ABC-type transport system ATP-binding protein (probable substrate polyamine) K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HELO_2900 ABC-type transport system periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HELO_2959 ABC-type transport system periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HELO_2897 ABC-type transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HELO_2898 ABC-type transport system permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HELO_2896 ABC-type transport system ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HELO_1458 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_2755 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_4388 gbtC; ABC-type transport system periplasmic substrate-binding protein (probable substrate glycine betaine) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_1862 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_2762 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_1568 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_1125 ABC-type transport system periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D HELO_3357 gbtB; ABC-type transport system permease protein (probable substrate glycine betaine) K02001 proW; glycine betaine/proline transport system permease protein
D HELO_3356 gbtA; ABC-type transport system ATP-binding protein (probable substrate glycine betaine) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D HELO_2366 osmX; ABC-type transport system periplasmic substrate-binding protein (probable substrate osmolyte) K05845 opuC; osmoprotectant transport system substrate-binding protein
D HELO_2367 osmW; ABC-type transport system permease protein (probable substrate osmolyte) K05846 opuBD; osmoprotectant transport system permease protein
D HELO_2369 osmY; ABC-type transport system permease protein (probable substrate osmolyte) K05846 opuBD; osmoprotectant transport system permease protein
D HELO_2368 osmV; ABC-type transport system ATP-binding protein (probable substrate osmolyte) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HELO_2683 THI5 family protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D HELO_3650 ynjB; probable ABC-type transport system periplasmic substrate-binding protein YnjB K05777 ynjB; putative thiamine transport system substrate-binding protein
D HELO_3651 ynjC; ABC-type transport system permease protein YnjC K05778 ynjC; putative thiamine transport system permease protein
D HELO_3652 ynjD; ABC-type transport system ATP-binding protein YnjD K05779 ynjD; putative thiamine transport system ATP-binding protein
D HELO_3685 malE; ABC-type transport system periplasmic substrate-binding protein (probable substrate maltose) K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D HELO_3684 malF; ABC-type transport system permease protein (probable substrate maltose) K10109 malF; maltose/maltodextrin transport system permease protein
D HELO_3683 malG; ABC-type transport system permease protein (probable substrate maltose) K10110 malG; maltose/maltodextrin transport system permease protein
D HELO_3679 thuK2; ABC-type transport system ATP-binding protein (probable substrate trehalose) K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_1162 ABC-type transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_2486 ABC-type transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_2791 ABC-type transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_3678 thuK1; ABC-type transport system ATP-binding protein (probable substrate trehalose) K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_3091 gtsD; ABC-type transport system ATP-binding protein (probable substrate glucose) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_1158 ABC-type transport system periplasmic substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HELO_1159 ABC-type transport system permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HELO_1160 ABC-type transport system permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HELO_3094 gtsA; ABC-type transport system periplasmic substrate-binding protein (probable substrate glucose) K17315 gtsA; glucose/mannose transport system substrate-binding protein
D HELO_3093 gtsB; ABC-type transport system permease protein (probable substrate glucose) K17316 gtsB; glucose/mannose transport system permease protein
D HELO_3092 gtsC; ABC-type transport system permease protein (probable substrate glucose) K17317 gtsC; glucose/mannose transport system permease protein
D HELO_3674 thuE; ABC-type transport system periplasmic substrate-binding protein (probable substrate trehalose) K10236 thuE; trehalose/maltose transport system substrate-binding protein
D HELO_3675 thuF; ABC-type transport system permease protein (probable substrate trehalose) K10237 thuF; trehalose/maltose transport system permease protein
D HELO_3676 thuG; ABC-type transport system permease protein (probable substrate trehalose) K10238 thuG; trehalose/maltose transport system permease protein
D HELO_2787 araF; ABC-type transport system periplasmic substrate-binding protein (probable substrate L-arabinose) K10537 araF; L-arabinose transport system substrate-binding protein
D HELO_2785 araH; ABC-type transport system permease protein (probable substrate L-arabinose) K10538 araH; L-arabinose transport system permease protein
D HELO_2786 araG; ABC-type transport system ATP-binding protein (probable substrate L-arabinose) K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D HELO_3493 rbsB; ABC-type transport system periplasmic substrate-binding protein (probable substrate ribose) K10439 rbsB; ribose transport system substrate-binding protein
D HELO_3495 rbsC; ABC-type transport system permease protein (probable substrate ribose) K10440 rbsC; ribose transport system permease protein
D HELO_3494 rbsA; ABC-type transport system ATP-binding protein (probable substrate ribose) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HELO_1194 ABC-type transport system periplasmic substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D HELO_3970 ABC-type transport system periplasmic substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D HELO_1193 ABC-type transport system permease protein K17203 eryF; erythritol transport system permease protein
D HELO_3968 ABC-type transport system permease protein K17203 eryF; erythritol transport system permease protein
D HELO_1192 ABC-type transport system ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D HELO_3969 ABC-type transport system ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D HELO_2985 ABC-type transport system periplasmic substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D HELO_2988 ABC-type transport system permease protein K17322 glpP; glycerol transport system permease protein
D HELO_2987 ABC-type transport system permease protein K17323 glpQ; glycerol transport system permease protein
D HELO_2990 ABC-type transport system ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D HELO_2989 ABC-type transport system ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D HELO_1850 ugpB; ABC-type transport system periplasmic substrate-binding protein (probable substrate sn-glycerol-3-phosphate) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D HELO_1849 ugpA; ABC-type transport system permease protein (probable substrate sn-glycerol-3-phosphate) K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D HELO_1848 ugpE; ABC-type transport system permease protein (probable substrate sn-glycerol-3-phosphate) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D HELO_1847 upgC; ABC-type transport system ATP-binding protein (probable substrate sn-glycerol-3-phosphate) K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D HELO_2483 ABC-type transport system periplasmic substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D HELO_2484 ABC-type transport system permease protein K10228 smoF; polyol transport system permease protein
D HELO_2485 ABC-type transport system permease protein K10229 smoG; polyol transport system permease protein
D HELO_2139 ybbM family protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D HELO_2138 ABC-type transport system ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D HELO_1931 mlaD; ABC-type transport system periplasmic substrate-binding protein (probable substrate phospholipid) K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HELO_1930 mlaE; probable ABC-type transport system permease protein (probable substrate phospholipid) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HELO_1929 mlaF; ABC-type transport system ATP-binding protein (probable substrate phospholipid) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HELO_1932 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D HELO_1933 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D HELO_2790 ABC-type transport system periplasmic substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HELO_2789 ABC-type transport system permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HELO_2788 ABC-type transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HELO_4237 ABC-type transport system periplasmic substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D HELO_4236 ABC-type transport system permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D HELO_4235 ABC-type transport system ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HELO_4423 pstS; ABC-type transport system periplasmic substrate-binding protein (probable substrate phosphate) K02040 pstS; phosphate transport system substrate-binding protein
D HELO_2126 ABC-type transport system periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HELO_4422 pstC; ABC-type transport system permease protein (probable substrate phosphate) K02037 pstC; phosphate transport system permease protein
D HELO_2127 ABC-type transport system permease protein K02037 pstC; phosphate transport system permease protein
D HELO_2128 ABC-type transport system permease protein K02038 pstA; phosphate transport system permease protein
D HELO_4421 pstA; ABC-type transport system permease protein (probable substrate phosphate) K02038 pstA; phosphate transport system permease protein
D HELO_2129 ABC-type transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HELO_4420 pstB; ABC-type transport system ATP-binding protein (probable substrate phosphate) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HELO_2137 ABC-type transport system periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HELO_3005 ABC-type transport system periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HELO_3639 ABC-type transport system periplasmic substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HELO_2134 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_2135 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_3007 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_3008 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_3641 ABC-type transport system permease protein K02042 phnE; phosphonate transport system permease protein
D HELO_2136 ABC-type transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HELO_3006 ABC-type transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HELO_3640 ABC-type transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HELO_4458 glnH; ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine) K10036 glnH; glutamine transport system substrate-binding protein
D HELO_4457 glnP; ABC-type transport system permease protein (probable substrate glutamine) K10037 glnP; glutamine transport system permease protein
D HELO_4456 glnQ; ABC-type transport system ATP-binding protein (probable substrate glutamine) K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HELO_4319 aapJ; ABC-type transport system periplasmic substrate-binding protein AapJ K09969 aapJ; general L-amino acid transport system substrate-binding protein
D HELO_4318 aapQ; ABC-type transport system permease protein AapQ K09970 aapQ; general L-amino acid transport system permease protein
D HELO_4317 aapM; ABC-type transport system permease protein AapM K09971 aapM; general L-amino acid transport system permease protein
D HELO_4316 aapP; ABC-type transport system ATP-binding protein AapP K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HELO_1548 ABC-type transport system periplasmic substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D HELO_1549 ABC-type transport system permease protein K10023 aotM; arginine/ornithine transport system permease protein
D HELO_1550 ABC-type transport system permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D HELO_1551 ABC-type transport system ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D HELO_1113 ABC-type transport system periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HELO_1115 ABC-type transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HELO_1114 ABC-type transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HELO_1117 ABC-type transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HELO_1116 ABC-type transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HELO_2999 metQ; ABC-type transport system periplasmic substrate-binding protein (probable substrate D-methionine) K02073 metQ; D-methionine transport system substrate-binding protein
D HELO_2998 metI; ABC-type transport system permease protein (probable substrate D-methionine) K02072 metI; D-methionine transport system permease protein
D HELO_2997 metN; ABC-type transport system ATP-binding protein (probable substrate D-methionine) K02071 metN; D-methionine transport system ATP-binding protein
D HELO_2271 ABC-type transport system periplasmic substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D HELO_2272 ABC-type transport system permease protein K11960 urtB; urea transport system permease protein
D HELO_2273 ABC-type transport system permease protein K11961 urtC; urea transport system permease protein
D HELO_2274 ABC-type transport system ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D HELO_2275 ABC-type transport system ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D HELO_1794 ABC-type transport system periplasmic substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D HELO_1795 ABC-type transport system permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D HELO_1796 ABC-type transport system ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D HELO_2295 ABC-type transport system periplasmic substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HELO_2362 ABC-type transport system periplasmic substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HELO_2766 ABC-type transport system periplasmic substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HELO_2363 ABC-type transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HELO_2364 ABC-type transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HELO_2767 ABC-type transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HELO_2767A ABC-type transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HELO_2361 ABC-type transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HELO_2765 ABC-type transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HELO_3846 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3845 ABC-type transport system periplasmic substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HELO_3847 ABC-type transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D HELO_3848 ABC-type transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D HELO_3849 ABC-type transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HELO_2585 ABC-type transport system periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HELO_2584 ABC-type transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HELO_2583 ABC-type transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HELO_2582 ABC-type transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HELO_2581 ABC-type transport system ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HELO_2696 ABC-type transport system periplasmic substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D HELO_2697 ABC-type transport system permease protein K13894 yejB; microcin C transport system permease protein
D HELO_2698 ABC-type transport system permease protein K13895 yejE; microcin C transport system permease protein
D HELO_2699 ABC-type transport system ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D HELO_3313 fhuD; ABC-type transport system periplasmic substrate-binding protein (probable substrate hydroxamate iron) K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D HELO_3314 fhuB; ABC-type transport system permease protein (probable substrate hydroxamate iron) K23228 fhuB; ferric hydroxamate transport system permease protein
D HELO_3312 fhuC; ABC-type transport system ATP-binding protein (probable substrate hydroxamate iron) K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D HELO_2415 hmuT; ABC-type transport system periplasmic substrate-binding protein (probable substrate hemin) K25132 hmuT; heme transport system substrate-binding protein
D HELO_2416 hmuU; ABC-type transport system permease protein (probable substrate hemin) K25133 hmuU; heme transport system permease protein
D HELO_2417 hmuV; ABC-type transport system ATP-binding protein (probable substrate hemin) K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D HELO_3347 ABC-type transport system periplasmic substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D HELO_3346 ABC-type transport system permease protein K23186 fepD; iron-siderophore transport system permease protein
D HELO_3345 ABC-type transport system permease protein K23187 fepG; iron-siderophore transport system permease protein
D HELO_3344 ABC-type transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D HELO_3328 ABC-type transport system periplasmic substrate-binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D HELO_3329 ABC-type transport system permease protein K25110 sirB; iron-siderophore transport system permease protein
D HELO_3330 ABC-type transport system permease protein K25111 sirC; iron-siderophore transport system permease protein
D HELO_3337 ABC-type transport system ATP-binding protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D HELO_2829 fatB; ABC-type transport system periplasmic substrate-binding protein (probable substate siderophore iron) K25282 yclQ; iron-siderophore transport system substrate-binding protein
D HELO_3348 ABC-type transport system periplasmic substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D HELO_2831 fatC; ABC-type transport system permease protein (probable substate siderophore iron) K25283 yclO; iron-siderophore transport system permease protein
D HELO_2832 fatD; ABC-type transport system permease protein (probable substate siderophore iron) K25284 yclN; iron-siderophore transport system permease protein
D HELO_2830 fatE; ABC-type transport system ATP-binding protein (probable substate siderophore iron) K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D HELO_4154 ABC-type transport system periplasmic substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HELO_1823 btuF; ABC-type transport system periplasmic substrate-binding protein (probable substrate cobalamin) K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HELO_1828 ABC-type transport system periplasmic substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HELO_4155 ABC-type transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HELO_1824 btuC; ABC-type transport system permease protein (probable substrate cobalamin) K02015 ABC.FEV.P; iron complex transport system permease protein
D HELO_1827 ABC-type transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HELO_4156 ABC-type transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HELO_1825 btuD; ABC-type transport system ATP-binding protein (probable substrate cobalamin) K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HELO_1826 ABC-type transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HELO_4009 YodA family protein K09815 znuA; zinc transport system substrate-binding protein
D HELO_4010 znuA; ABC-type transport system periplasmic substrate-binding protein (probable substrate zinc) K09815 znuA; zinc transport system substrate-binding protein
D HELO_4012 znuB; ABC-type transport system permease protein (probable substrate zinc) K09816 znuB; zinc transport system permease protein
D HELO_4011 znuC; ABC-type transport system ATP-binding protein (probable substrate zinc) K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HELO_3342 ABC-type transport system periplasmic substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D HELO_3340 ABC-type transport system permease protein K11708 troC; manganese/zinc/iron transport system permease protein
D HELO_3339 ABC-type transport system permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D HELO_3341 ABC-type transport system ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D HELO_4295 ABC-type transport system periplasmic substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D HELO_4294 ABC-type transport system permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D HELO_4293 ABC-type transport system ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D HELO_2392 ABC-type transport system permease protein K09688 kpsM; capsular polysaccharide transport system permease protein
D HELO_2394 homolog to capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D HELO_2393 ABC-type transport system ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D HELO_3597 ABC-type transport system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D HELO_3596C ABC-type transport system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D HELO_1359 lptF; lipopolysaccharide export system permease protein LptF K07091 lptF; lipopolysaccharide export system permease protein
D HELO_1360 lptG; lipopolysaccharide export system permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein
D HELO_1924 lptB; lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HELO_1976 lolC; ABC-type lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D HELO_1977 lolD; ABC-type lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HELO_3727 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D HELO_3728 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D HELO_3729 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HELO_3730 ccmA; heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HELO_3833 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HELO_3834 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HELO_2017 yadH; ABC-type transport system permease protein YadH K01992 ABC-2.P; ABC-2 type transport system permease protein
D HELO_2320 ABC-type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HELO_2016 yadG; ABC-type transport system ATP-binding protein YadG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HELO_2321 ABC-type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HELO_3600 ybbP; ABC-type transport system permease protein YbbP K02004 ABC.CD.P; putative ABC transport system permease protein
D HELO_3601 ybbA; ABC-type transport system ATP-binding protein YbbA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HELO_1785 sufC; iron-sulfur cluster assembly complex subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HELO_2511 sdcS; DASS family transport protein (probable substrate dicarboxylate) K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D HELO_1749 MATE family transport protein K26939 norM; MATE family, multidrug efflux pump
D HELO_2606 MATE family transport protein K26937 dinF; MATE family, multidrug efflux pump
D HELO_3986 MATE family transport protein K26937 dinF; MATE family, multidrug efflux pump
D HELO_2250 MATE family transport protein K26937 dinF; MATE family, multidrug efflux pump
D HELO_2781 MATE family transport protein K26937 dinF; MATE family, multidrug efflux pump
D HELO_1307 major facilitator superfamily transport protein K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D HELO_1164 major facilitator superfamily transport protein K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D HELO_1766 major facilitator superfamily transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D HELO_2449 major facilitator superfamily transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D HELO_2132 major facilitator superfamily transport protein K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D HELO_3211 major facilitator superfamily transport protein (probable substrate nitrate) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HELO_2857 major facilitator superfamily transport protein (probable substrate nitrate/nitrite) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HELO_2858 major facilitator superfamily transport protein (probable substrate nitrate/nitrite) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HELO_2304 major facilitator superfamily transport protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HELO_3320 major facilitator superfamily transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HELO_1490 major facilitator superfamily transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HELO_2125 major facilitator superfamily transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HELO_1065 major facilitator superfamily transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HELO_4402 major facilitator superfamily transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D HELO_1288 major facilitator superfamily transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D HELO_4441 major facilitator superfamily transport protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D HELO_3841 major facilitator superfamily transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D HELO_3455 major facilitator superfamily transport protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D HELO_3077 major facilitator superfamily transport protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D HELO_3908 major facilitator superfamily transport protein K06902 UMF1; MFS transporter, UMF1 family
D HELO_1696 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HELO_1919 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D HELO_3698 fruB; multiphosphoryl transfer protein, fructose-specific K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D HELO_3100 nagF; multiphosphoryl transfer protein, N-acetylglucosamine-specific K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D HELO_3099 nagE; phosphotransferase system component EIICB, N-acetylglucosamine-specific K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D HELO_3696 fruA; phosphotransferase system component EIIBC, fructose-specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HELO_1921 ptsN; nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D HELO_1434 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D HELO_1613 homolog to potassium channel protein K10716 kch; voltage-gated potassium channel
D HELO_3925 ion channel domain protein K10716 kch; voltage-gated potassium channel
D HELO_1723 ion channel domain protein K08714 VGSC; voltage-gated sodium channel
D HELO_1099 AmtB family transport protein (probable substrate ammonium) K03320 amt; ammonium transporter, Amt family
D HELO_2738 probable glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HELO_1811 dcmA; putative dichloromethane dehalogenase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HELO_1202 glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HELO_1946 sspA; stringent starvation protein SspA K03599 sspA; stringent starvation protein A
D HELO_2627 yccA; modulator of FtsH protease YccA K19416 yccA; modulator of FtsH protease
D HELO_2045 mscK; mechanosensitive ion channel MscK K05802 mscK; potassium-dependent mechanosensitive channel
D HELO_3378 mscS1; mechanosensitive ion channel MscS K03442 mscS; small conductance mechanosensitive channel
D HELO_4248 mscS2; mechanosensitive ion channel MscS K22044 ybiO; moderate conductance mechanosensitive channel
D HELO_3171 mscS3; mechanosensitive ion channel MscS K22044 ybiO; moderate conductance mechanosensitive channel
D HELO_3048 MgtE family transport protein K06213 mgtE; magnesium transporter
D HELO_4439 MgtE family transport protein K06213 mgtE; magnesium transporter
D HELO_4344 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D HELO_4343 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HELO_3039 ExbB family protein K03561 exbB; biopolymer transport protein ExbB
D HELO_3040 DUFx/ExbB domain protein K03561 exbB; biopolymer transport protein ExbB
D HELO_3038 ExbD family protein K03559 exbD; biopolymer transport protein ExbD
D HELO_2563 tolQ; ExbB family protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D HELO_2564 tolR; ExbD family protein TolR K03560 tolR; biopolymer transport protein TolR
D HELO_1429 MIT family transport protein K03284 corA; magnesium transporter
D HELO_4246 crcB2; probable fluoride ion transport protein CrcB K06199 crcB; fluoride exporter
D HELO_4247 crcB1; probable fluoride ion transport protein CrcB K06199 crcB; fluoride exporter
D HELO_2680 DUF21 / CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HELO_3866 UPF0053 family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HELO_3682 lamB1; maltoporin K02024 lamB; maltoporin
D HELO_1163 lamB2; maltoporin K02024 lamB; maltoporin
D HELO_3673 scrY; sucrose porin K16077 scrY; sucrose porin
D HELO_2513 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HELO_4291 PagP domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HELO_3851 FadL family protein K06076 fadL; long-chain fatty acid transport protein
D HELO_1079 outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_2151E outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_2290 SGNH family hydrolase K12686 apeE; outer membrane lipase/esterase
D HELO_1822 btuB; TonB-dependent receptor BtuB (probable substrate cobalamin) K16092 btuB; vitamin B12 transporter
D HELO_3349 irgA; TonB-dependent receptor IrgA (probable substrate enterobactin) K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D HELO_2413 hmuR; TonB-dependent receptor HmuR (probable substrate hemin) K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HELO_3307 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HELO_3316 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HELO_3892 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HELO_1153 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HELO_3304 iutA; TonB-dependent receptor IutA (probable substrate ferric enterobactin) K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HELO_3326 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HELO_2827 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HELO_3128 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1472 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_3796 bamA; outer membrane protein assembly factor bamA K07277 SAM50; outer membrane protein insertion porin family
D HELO_1384 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D HELO_3579 uncharacterized protein K07287 bamC; outer membrane protein assembly factor BamC
D HELO_1329 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D HELO_4163 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D HELO_2576 tamA; translocation/assembly module protein TamA K07278 tamA; translocation and assembly module TamA
D HELO_2577 tamB; translocation/assembly module protein TamB K09800 tamB; translocation and assembly module TamB
D HELO_2962A uncharacterized protein K22110 kdgM; oligogalacturonate-specific porin family protein
D HELO_1660 YadA domain protein K21449 ata; trimeric autotransporter adhesin
D HELO_1925 lptA; lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D HELO_1926 lptC; lipopolysaccharide export system protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D HELO_3485 lptD; LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D HELO_2226 lptE; LPS-assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D HELO_3392 corC; CorC family transport protein (probable substrate magnesium/cobalt) K06189 corC; hemolysin (HlyC) family protein
D HELO_2500 CidA family protein K06518 cidA; holin-like protein
D HELO_2677 arcD; APC family transport protein (probable arginine/ornithine antiporter) K03758 arcD; arginine:ornithine antiporter / lysine permease
D HELO_1536 APC family transport protein K16238 eat; ethanolamine permease
D HELO_1175 APC family transport protein K20265 gadC; glutamate:GABA antiporter
D HELO_2020 zitB; cation diffusion facilitator family transport protein (probable substrate zinc) K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HELO_2036 HAE1 family transport protein K18138 acrB; multidrug efflux pump
D HELO_1691 HAE1 family transport protein K18989 vexF; multidrug efflux pump
D HELO_3738 HAE1 family transport protein K19585 oqxB; multidrug efflux pump
D HELO_3979 SMR family transport protein K03297 emrE; small multidrug resistance pump
D HELO_3710 DMT superfamily transport protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D HELO_2704 RarD family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D HELO_3253 UPF0060 family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D HELO_2474 NhaC family sodium/proton antiporter domain protein K07084 yuiF; putative amino acid transporter
D HELO_4217 GntP family transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HELO_4096 LldP family transport protein K03303 lutP; lactate permease
D HELO_2406A BCC family transport protein K05020 opuD; glycine betaine transporter
D HELO_1743 BCC family transport protein K05020 opuD; glycine betaine transporter
D HELO_4292 BCC family transport protein K02168 betT; choline/glycine/proline betaine transport protein
D HELO_2750 BCC family transport protein K02168 betT; choline/glycine/proline betaine transport protein
D HELO_3694 BCC family transport protein K02168 betT; choline/glycine/proline betaine transport protein
D HELO_2455 NCKX family transport protein K07301 yrbG; cation:H+ antiporter
D HELO_2054 NCKX family transport protein K07301 yrbG; cation:H+ antiporter
D HELO_3261 SSS family transport protein K14392 panF; sodium/pantothenate symporter
D HELO_3548 SSS family transport protein K14393 actP; cation/acetate symporter
D HELO_3268 sstT; SDF family transport protein (probable substrate serine/threonine) K07862 sstT; serine/threonine transporter
D HELO_1557 mleN; NhaC family malate/lactate antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D HELO_1086 NhaC family sodium/proton antiporter domain protein K18218 tet35; tetracycline resistance efflux pump
D HELO_2682 nhaP; NHE family potassium/proton antiporter NhaP K11105 cvrA; potassium/hydrogen antiporter
D HELO_3903 kefB; potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D HELO_1371 trkH; trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D HELO_1450 trkI; trk system potassium uptake protein TrkI K03498 trkH; trk/ktr system potassium uptake protein
D HELO_1372 trkA; trk system peripheral membrane protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D HELO_2983 NCS2 family transport protein K02824 uraA; uracil permease
D HELO_2468 NCS2 family transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D HELO_2995 NCS2 family transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D HELO_2310 BenE family transport protein K05782 benE; benzoate membrane transport protein
D HELO_2958 clcB1; ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family
D HELO_4461 clcB2; ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family
D HELO_1611 ChrA family transport protein K07240 chrA; chromate transporter
D HELO_2025 ChrA family transport protein K07240 chrA; chromate transporter
D HELO_2026 ChrA family transport protein K07240 chrA; chromate transporter
D HELO_2705 sulfate transport domain protein K03321 TC.SULP; sulfate permease, SulP family
D HELO_3645 ybaR; SulP family transport protein (probable substrate sulfate) K03321 TC.SULP; sulfate permease, SulP family
D HELO_3560 mntH; divalent metal cation transport protein MntH K03322 mntH; manganese transport protein
D HELO_3558 TRAP transporter large transmembrane protein (probable substrate L-fuconate) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_3706 TRAP transporter large transmembrane protein (probable substrate (S)-2-acetolactate) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_2939 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_4276 teaC; TRAP transporter large transmembrane protein TeaC (substrate ectoine) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_1150 TRAP transporter large transmembrane protein (probable substrate D-mannonate/L-gulonate) K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_1546 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_1502 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_2033 TRAP transporter large transmembrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D HELO_1053 TRAP transporter large transmembrane protein (probable substrate D-galactonate) K21393 yiaN; TRAP-type transport system large permease protein
D HELO_4225 TRAP transporter large transmembrane protein (probable substrate D-Ala-D-Ala) K21393 yiaN; TRAP-type transport system large permease protein
D HELO_1167 TRAP transporter large transmembrane protein (probable substrate D-mannuronate) K21393 yiaN; TRAP-type transport system large permease protein
D HELO_1052 TRAP transporter small transmembrane protein (probable substrate D-galactonate) K21394 yiaM; TRAP-type transport system small permease protein
D HELO_1036 TRAP transporter small transmembrane protein K21394 yiaM; TRAP-type transport system small permease protein
D HELO_1478 TRAP transporter small transmembrane protein K21394 yiaM; TRAP-type transport system small permease protein
D HELO_1168 TRAP transporter small transmembrane protein (probable substrate D-mannuronate) K21394 yiaM; TRAP-type transport system small permease protein
D HELO_1051 TRAP transporter substrate-binding protein (probable substrate D-galactonate) K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_3708 TRAP transporter substrate-binding protein (probable substrate (S)-2-acetolactate) K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_2884 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_4223 TRAP transporter substrate-binding protein (probable substrate D-Ala-D-Ala) K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_3933 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_3942 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_3951 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_1477 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_1544 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_1169 TRAP transporter substrate-binding protein (probable substrate D-mannuronate) K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_3556 TRAP transporter substrate-binding protein (probable substrate L-fuconate) K21395 yiaO; TRAP-type transport system periplasmic protein
D HELO_2734 ArsA family protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D HELO_1497 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D HELO_3514 mrpAB2; Mrp-type sodium/proton antiporter system subunit AB K05559 phaA; multicomponent K+:H+ antiporter subunit A
D HELO_3515 mrpC2; Mrp-type sodium/proton antiporter system subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D HELO_3516 mrpD2; Mrp-type sodium/proton antiporter system subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D HELO_3517 mrpE2; Mrp-type sodium/proton antiporter system subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D HELO_3518 mrpF2; Mrp-type sodium/proton antiporter system subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D HELO_3519 mrpG2; Mrp-type sodium/proton antiporter system subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D HELO_3513 mrpA1; Mrp-type sodium/proton antiporter system subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D HELO_3512 mrpB1; Mrp-type sodium/proton antiporter system subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D HELO_3511 mrpC1; Mrp-type sodium/proton antiporter system subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D HELO_3510 mrpD1; Mrp-type sodium/proton antiporter system subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D HELO_3509 mrpE1; Mrp-type sodium/proton antiporter system subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D HELO_3508 mrpF1; Mrp-type sodium/proton antiporter system subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D HELO_3507 mrpG1; Mrp-type sodium/proton antiporter system subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D HELO_1315 murJ; probable lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HELO_3965 AEC family transport protein K13936 mdcF; malonate transporter and related proteins
D HELO_4280 AEC family transport protein K13936 mdcF; malonate transporter and related proteins
D HELO_3354 AEC family transport protein K24180 mleP; malate permease and related proteins
D HELO_1203 uncharacterized protein K24180 mleP; malate permease and related proteins
D HELO_3418 AEC family transport protein K24180 mleP; malate permease and related proteins
D HELO_4108 AEC family transport protein K24180 mleP; malate permease and related proteins
D HELO_1649 argO; LysE family arginine export protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D HELO_2189 LysE family transport protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D HELO_1276 LysE family transport protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D HELO_1405 LysE family transport protein K05835 rhtC; threonine efflux protein
D HELO_3271 YgaZ family protein K26605 azlC; branched chain amino acid efflux pump
D HELO_3272 AzlD family transport protein K26606 azlD; branched chain amino acid efflux pump
D HELO_3414 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_1623 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_2270 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_1137 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_3290 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_1045 TTT family transporter large transmembrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D HELO_2269 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1624 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1044 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1136 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_3415 TTT family transporter small transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D HELO_1625 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_2268 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_1135 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_1043 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_3291 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_3416 TTT family transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D HELO_3582 UPF0118 family protein K03548 perM; putative permease
D HELO_2685 DUF165 domain protein K09125 yhhQ; queuosine precursor transporter
D HELO_1961 ftsW; probable lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D HELO_2404 mntP; probable manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D HELO_3318 RcnA family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D HELO_3037 TonB-like protein K03832 tonB; periplasmic protein TonB
D HELO_2567 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D HELO_2565 tolA; TonB-like protein TolA K03646 tolA; colicin import membrane protein
D HELO_2566 tolB; translocation protein TolB K03641 tolB; TolB protein
D HELO_3734 oadB; oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HELO_3735 oadA; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HELO_3736 oadC; oxaloacetate decarboxylase gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D HELO_2854 narG; respiratory nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HELO_2853 narH; respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HELO_2851 narI; respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HELO_3315 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D HELO_4442 RND family transport protein MFP component K03543 emrA; membrane fusion protein, multidrug efflux system
D HELO_1471 RND family transport protein MFP component K12537 hasE; membrane fusion protein, type I secretion system
D HELO_2046 RND family transport protein MFP component K13408 cvaA; membrane fusion protein
D HELO_2037 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_3127 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_1692 RND family transport protein MFP component K18990 vexE; membrane fusion protein, multidrug efflux system
D HELO_3739 RND family transport protein MFP component K19586 oqxA; membrane fusion protein, multidrug efflux system
D HELO_4251 macA; ABC-type transport system MFP component (probable substrate macrolide) K13888 macA; membrane fusion protein, macrolide-specific efflux system
D HELO_3725 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D HELO_2611 YhiD family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D HELO_1591 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D HELO_2842 MipA family protein K07274 mipA; MipA family protein
D HELO_2008 MipA family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:hel02044]
D HELO_3128 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1472 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1470 ABC-type transport system ATP-binding/permease protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D HELO_1471 RND family transport protein MFP component K12537 hasE; membrane fusion protein, type I secretion system
D HELO_2046 RND family transport protein MFP component K13408 cvaA; membrane fusion protein
D HELO_2047 HlyB family toxin translocation ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D HELO_3218 uncharacterized protein K02452 gspC; general secretion pathway protein C
D HELO_3219 gspD2; general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D HELO_2770 gspD1; general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D HELO_3220 gspE2; general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HELO_2779 gspE1; general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HELO_3221 gspF2; general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D HELO_2778 gspF1; general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D HELO_3222 gspG2; general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D HELO_2777 gspG1; general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D HELO_3223 gspH2; general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D HELO_2776 gspH1; general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D HELO_3224 gspI2; general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D HELO_2775A gspI1; general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D HELO_3225 gspJ2; general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D HELO_2775 gspJ1; general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D HELO_3226 gspK2; general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D HELO_2774 gspK1; general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D HELO_2773 gspL; general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L
D HELO_2772 gspM; general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D HELO_2771 gspN; general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N
D HELO_2710 pilD; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HELO_2968 pilA; fimbrial protein PilA K02650 pilA; type IV pilus assembly protein PilA
D HELO_2969 pilB; type 4 fimbrial assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D HELO_2970 pilC; type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D HELO_1321 GspG domain protein K02655 pilE; type IV pilus assembly protein PilE
D HELO_1389 PilF family protein K02656 pilF; type IV pilus assembly protein PilF
D HELO_3760 pilM; fimbrial assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D HELO_3759 pilN; fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D HELO_3758 pilO; fimbrial assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D HELO_3757 pilP; fimbrial assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D HELO_3756 pilQ; fimbrial assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D HELO_4113 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HELO_1322 uncharacterized protein K02671 pilV; type IV pilus assembly protein PilV
D HELO_1325 GspH family protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D HELO_4116 YggT family protein K02221 yggT; YggT family protein
D HELO_2871 YbaV family protein K02237 comEA; competence protein ComEA
D HELO_1979 ComEC family protein K02238 comEC; competence protein ComEC
D HELO_4333 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HELO_4334 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HELO_4346 FlhB_Cterm domain protein K04061 flhB2; flagellar biosynthesis protein
D HELO_4359 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HELO_4361 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HELO_4362 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HELO_4366A fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HELO_4367 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HELO_4368 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HELO_4369 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HELO_4370 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HELO_3301 VirB5 family protein K03200 virB5; type IV secretion system protein VirB5
D HELO_3300 VirB6 family protein K03201 virB6; type IV secretion system protein VirB6
D HELO_4021 ParA domain protein K12055 K12055; chromosome partitioning related protein ParA
D HELO_4094 relaxase domain protein K12070 traI; conjugal transfer pilus assembly protein TraI
D HELO_4050 tfc6; secretion cluster MPF-G coupling protein K12071 traD; conjugal transfer pilus assembly protein TraD
D HELO_3858 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HELO_4064 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HELO_2290 SGNH family hydrolase K12686 apeE; outer membrane lipase/esterase
D HELO_2910 vasK; T6SS cluster protein VasK K11891 impL; type VI secretion system protein ImpL
D HELO_2915 vasF; T6SS cluster protein VasF K11892 impK; type VI secretion system protein ImpK
D HELO_2916 vasE; T6SS cluster protein VasE K11893 impJ; type VI secretion system protein ImpJ
D HELO_2919 vasB; T6SS cluster protein VasB K11895 impH; type VI secretion system protein ImpH
D HELO_2920 vasA; T6SS cluster protein VasA K11896 impG; type VI secretion system protein ImpG
D HELO_2922 vipB; T6SS cluster protein VipB K11900 impC; type VI secretion system protein ImpC
D HELO_2923 vipA; T6SS cluster protein VipA K11901 impB; type VI secretion system protein ImpB
D HELO_2929 hcp1; T6SS-related Hcp family protein K11903 hcp; type VI secretion system secreted protein Hcp
D HELO_4078 hcp2; T6SS-related Hcp family protein K11903 hcp; type VI secretion system secreted protein Hcp
D HELO_4077 vgr3; T6SS-related Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D HELO_2928 vgr2; T6SS-related Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D HELO_2907 vgr1; T6SS-related Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D HELO_2921 sciD; T6SS cluster protein SciD K11905 K11905; type VI secretion system protein
D HELO_2917 vasD; T6SS cluster protein VasD K11906 vasD; type VI secretion system protein VasD
D HELO_2914 clpV; T6SS cluster protein ClpV K11907 vasG; type VI secretion system protein VasG
D HELO_2911 vasJ; T6SS cluster protein VasJ K11910 vasJ; type VI secretion system protein VasJ
D HELO_2918 vasC; T6SS cluster protein VasC K11894 impI; type VI secretion system protein ImpI
D HELO_2912 vasI; T6SS cluster protein VasI K11909 vasI; type VI secretion system protein VasI
D HELO_1078 probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_2151D probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_1079 outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_2151E outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_1076 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1080 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_2151A homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1077 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_2151F homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1971 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HELO_1032 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HELO_1400 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D HELO_1223 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HELO_1399 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HELO_4140 secG; protein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HELO_1256 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HELO_3864 ffh; SRP54-type signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HELO_3835 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HELO_1401 yajC; protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HELO_4471 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HELO_3775 tatA; twin arginine translocation system protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D HELO_3776 tatB; twin arginine translocation system protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D HELO_3777 tatC; twin arginine translocation system protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hel02042]
D HELO_2680 DUF21 / CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HELO_3866 UPF0053 family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hel02022]
D HELO_4417 phoR; PAS domain protein / sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HELO_4416 phoB; response regulator/HTH domain transcription regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HELO_3887 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D HELO_3888 response regulator/HTH domain transcription regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D HELO_3689 baeS; sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D HELO_3690 baeR; response regulator/HTH domain transcription regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D HELO_1576 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HELO_1575 response regulator/HTH domain transcription regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D HELO_1627 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D HELO_2265 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D HELO_2266 response regulator/HTH domain transcription regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D HELO_1626 response regulator/HTH domain transcription regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D HELO_4320 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HELO_3097 gltR; response regulator/HTH domain transcription regulator GltR K02483 K02483; two-component system, OmpR family, response regulator
D HELO_3245 response regulator/HTH domain transcription regulator K02483 K02483; two-component system, OmpR family, response regulator
D HELO_1866 response regulator/HTH domain transcription regulator K02483 K02483; two-component system, OmpR family, response regulator
D HELO_2855 narX; sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D HELO_2856 narL; response regulator/HTH domain transcription regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D HELO_3015 sensor histidine kinase / response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D HELO_2810 uvrY; response regulator/HTH domain transcription regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D HELO_3716 PAS domain protein / sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D HELO_3715 response regulator domain protein K11615 malR; two-component system, CitB family, response regulator MalR
D HELO_1128 ntrB; PAS domain protein / sensor histidine kinase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HELO_1129 ntrC; response regulator/sigma-54-interact/HTH domain transcription regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HELO_1618 glrK; sensor kinase protein GlrK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D HELO_1620 glrR; response regulator/sigma-54-interact/HTH domain transcription regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D HELO_1218 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D HELO_1217 response regulator/sigma-54-interact/HTH domain transcription regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D HELO_1072 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D HELO_4342 cheA; taxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HELO_4335A cheY; chemotaxis-specific response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HELO_4336 cheB; chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HELO_2706 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HELO_2707 response regulator/HTH domain transcription regulator K15012 regA; two-component system, response regulator RegA
D HELO_2815 sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D HELO_3233 ABC-type transport system periplasmic substrate-binding protein (probable substrate nitrate/nitrite) K22067 nasS; two-component system, oxyanion-binding sensor
D HELO_3232 response regulator/HTH domain transcription regulator K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:hel02035]
D HELO_4342 cheA; taxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HELO_4341 cheW; purine-binding taxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D HELO_4337 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HELO_4336 cheB; chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HELO_4335A cheY; chemotaxis-specific response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HELO_4335 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D HELO_4340 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D HELO_4356 tar1; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D HELO_4339 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D HELO_4338 methyl-accepting chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D HELO_4361 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D HELO_4362 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HELO_4363 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D HELO_4367 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D HELO_4368 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HELO_4369 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HELO_4370 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HELO_4333 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HELO_4334 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D HELO_4332 flhE; flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D HELO_4360 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HELO_4366 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D HELO_4366A fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HELO_4359 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HELO_4374 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HELO_4382 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HELO_4375 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HELO_4365 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HELO_4358 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HELO_4364 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D HELO_4381 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D HELO_4380 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D HELO_4379 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HELO_4377 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HELO_4376 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HELO_4373 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D HELO_4378 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HELO_4372 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HELO_4371 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HELO_4383 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D HELO_4352 fliC1; flagellin K02406 fliC; flagellin
D HELO_4353 fliC2; flagellin K02406 fliC; flagellin
D HELO_4354 fliD2; flagellar capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HELO_4355 fliD1; flagellar capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D HELO_4349 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D HELO_4348 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D HELO_4345A flhD; flagellar transcription regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D HELO_4345 flhC; flagellar transcription regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D HELO_4331 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D HELO_4344 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D HELO_4343 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D HELO_4382A flgM; flagellin synthesis regulator FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D HELO_4357 flaG; FlaG family protein K06603 flaG; flagellar protein FlaG
D HELO_4113 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HELO_2968 pilA; fimbrial protein PilA K02650 pilA; type IV pilus assembly protein PilA
D HELO_2969 pilB; type 4 fimbrial assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D HELO_2970 pilC; type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D HELO_2710 pilD; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HELO_1389 PilF family protein K02656 pilF; type IV pilus assembly protein PilF
D HELO_3756 pilQ; fimbrial assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D HELO_3757 pilP; fimbrial assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D HELO_3758 pilO; fimbrial assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D HELO_3759 pilN; fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D HELO_3760 pilM; fimbrial assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D HELO_1322 uncharacterized protein K02671 pilV; type IV pilus assembly protein PilV
D HELO_1321 GspG domain protein K02655 pilE; type IV pilus assembly protein PilE
D HELO_1078 probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_2151D probable usher pathway chaperone K07346 fimC; fimbrial chaperone protein
D HELO_1079 outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_2151E outer membrane usher protein K07347 fimD; outer membrane usher protein
D HELO_1076 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1080 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_2151A homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_1077 homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HELO_2151F homolog to spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hel04812]
D HELO_1910 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HELO_1967 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HELO_1966 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HELO_3874 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D HELO_3873 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HELO_3872 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HELO_4453 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D HELO_2040 ParA domain protein K03496 parA; chromosome partitioning protein
D HELO_4452 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hel04147]
D HELO_3424 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D HELO_3749 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HELO_4242 gapA1; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_2214 homolog to glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HELO_1181 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HELO_4243 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_1605 pykA2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HELO_3462 peptidase M19 family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HELO_2875 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HELO_4159 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HELO_4245 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_1718 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HELO_1553 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HELO_1629 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HELO_1234 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HELO_3491 hinT; adenosine phosphoramidase HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HELO_2118 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HELO_4131 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_2140 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_3947 thiolase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HELO_1199 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HELO_3570 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HELO_2994 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HELO_4256 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HELO_2743 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HELO_3001 glpK1; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HELO_3972 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HELO_1126 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1537 GlnA domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1891 spuB; GlnA/PuuA domain protein SpuB K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_1902 puuA; glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HELO_3779 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HELO_2261 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HELO_2253 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D HELO_1560 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HELO_1081 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HELO_2176 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HELO_3110 lpd; dihydrolipoate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HELO_3042 etfA; electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D HELO_3637 zwf; glucose-6-phosphate 1-dehydrogenase (NAD(P)) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HELO_4141 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:hel02048]
D HELO_1103 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HELO_1104 cas3; CRISPR-associated nuclease/helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HELO_1105 csy1; CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D HELO_1106 csy2; CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D HELO_1107 csy3; CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D HELO_1107A csy4; CRISPR-associated endonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D HELO_2662 probable methyltransferase (homolog to DNA-adenine methyltransferase) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HELO_4206 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_4398 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_2111 probable methyltransferase (homolog to DNA-cytosine methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HELO_2078 higB; mRNA interferase HigB K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D HELO_2079 higA; antitoxin HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HELO_2373 HTH domain protein K21498 higA-1; antitoxin HigA-1
D HELO_1967 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HELO_1910 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HELO_1721 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HELO_1720 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HELO_3119 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HELO_2865 uncharacterized protein K19168 cptA; toxin CptA
D HELO_2866 DUF339 family protein K09159 cptB; antitoxin CptB
D HELO_1393 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:hel04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hel04090]
C 01504 Antimicrobial resistance genes [BR:hel01504]
D HELO_1086 NhaC family sodium/proton antiporter domain protein K18218 tet35; tetracycline resistance efflux pump
D HELO_1444 blaA; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HELO_4226 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D HELO_2037 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_3127 RND family transport protein MFP component K03585 acrA; membrane fusion protein, multidrug efflux system
D HELO_2036 HAE1 family transport protein K18138 acrB; multidrug efflux pump
D HELO_3128 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_1472 homolog to outer membrane protein TolC K12340 tolC; outer membrane protein
D HELO_2902 LysR family transcription regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hel00537]
D HELO_1560 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HELO_3462 peptidase M19 family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hel03100]
D HELO_TRNA17 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA64 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA9 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA39 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HELO_TRNA57 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA58 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA34 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA68 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA15 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HELO_TRNA20 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HELO_TRNA21 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HELO_TRNA22 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HELO_TRNA52 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HELO_TRNA55 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HELO_TRNA54 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HELO_TRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HELO_TRNA24 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HELO_TRNA62 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HELO_TRNA25 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA29 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA27 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA45 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HELO_TRNA26 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA40 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA30 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA18 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HELO_TRNA35 tRNA-His K14226 tRNA-His; tRNA His
D HELO_TRNA36 tRNA-His K14226 tRNA-His; tRNA His
D HELO_TRNA1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA65 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA16 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA8 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HELO_TRNA10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA42 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA67 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA51 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA49 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HELO_TRNA13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HELO_TRNA14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HELO_TRNA19 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA23 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA48 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA60 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA66 tRNA-Met K14230 tRNA-Met; tRNA Met
D HELO_TRNA61 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HELO_TRNA7 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HELO_TRNA37 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HELO_TRNA33 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HELO_TRNA59 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HELO_TRNA31 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HELO_TRNA38 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HELO_TRNA12 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA63 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HELO_TRNA6 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HELO_TRNA3 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HELO_TRNA43 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_TRNA44 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_TRNA53 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_TRNA56 tRNA-Val K14237 tRNA-Val; tRNA Val
D HELO_RNA16S1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S3 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA16S2 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HELO_RNA23S4 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S1 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA23S3 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HELO_RNA5S1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S4 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA5S2 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HELO_RNA7S SRP RNA (7S RNA) K01983 ffs; SRP RNA
D HELO_RNASEP RNAse P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HELO_2748 lcdH; L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D HELO_1287 dkgB; 2,5-diketo-D-gluconate reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D HELO_3269 gpr; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D HELO_1306 probable oxidoreductase (iron-containing alcohol dehydrogenase family) K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-]
D HELO_1190 probable oxidoreductase (zinc-containing alcohol dehydrogenase family) K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D HELO_1209 lacA; GMC family oxidoreductase (homolog to lactose dehydrogenase flavoprotein subunit) K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D HELO_3355 yliI; aldose sugar dehydrogenase YliI K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D HELO_2131 gapA2; glyceraldehyde 3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D HELO_3534 fadH; 2,4-dienoyl-CoA reductase (NADPH) K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D HELO_2146 oxidoreductase (homolog to nicotinate dehydrogenase subunit A) K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D HELO_2147 oxidoreductase (homolog to nicotinate dehydrogenase subunit B) K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D HELO_3044 etfD; electron transfer flavoprotein--ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D HELO_1853 qorA; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HELO_1607 azoR2; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D HELO_3883 azoR1; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D HELO_4329 ahpF; alkyl hydroperoxide reductase subunit AhpF K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D HELO_3076 msrA2; peptide methionine sulfoxide reductase MsrA (S-form specific) K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HELO_2578 msrA1; peptide methionine sulfoxide reductase MsrA (S-form specific) K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HELO_1686 msrB2; peptide methionine sulfoxide reductase MsrB (R-form specific) K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D HELO_2015 msrB1; peptide methionine sulfoxide reductase MsrB (R-form specific) K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D HELO_1643 yghU; disulfide-bond oxidoreductase YghU K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HELO_3194 yqjG; glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D HELO_3581 bcp; probable peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HELO_4301 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HELO_4330 ahpC; alkyl hydroperoxide reductase subunit AhpC K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HELO_3174 osmC; peroxiredoxin OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D HELO_1986 pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HELO_3196 pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HELO_1988 pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HELO_2888 qdoI; quercetin 2,3-dioxygenase K07155 qodI; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HELO_2753 ybiX; PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D HELO_2893 hmp; nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D HELO_2824 RhbE family siderophore biosynthesis protein K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D HELO_1093 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HELO_2612 ArsC family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HELO_1637 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HELO_3613 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D HELO_2259 cfa1; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D HELO_1266 nhoA; N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D HELO_2120 beta-ketodecanoyl-[acyl-carrier-protein] synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D HELO_3393 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D HELO_2944 GNAT family acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D HELO_3166 GNAT family acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D HELO_3575 GNAT family acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D HELO_2941D GNAT family acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D HELO_3058 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D HELO_3059 ate; probable arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D HELO_1368 DTW domain protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D HELO_1700 lgt; prolipoprotein diacylglyceryltransferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HELO_4437 apbE; FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HELO_1482 DUF1537 domain protein K23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231]
D HELO_2432 ppsR; regulatory protein kinase PpsR K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HELO_3976 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HELO_1511 UPF0061 family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D HELO_1013 opgB; phosphoglycerol transferase OpgB K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D HELO_2374 protein kinase domain protein K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D HELO_3705 ymdB; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D HELO_2889 alpha/beta hydrolase fold protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D HELO_2749 thioesterase domain protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D HELO_3820 thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HELO_1350 thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HELO_3501 thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HELO_3712 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HELO_1581 betC; choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D HELO_2543 yjjV; TatD-type hydrolase YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HELO_2005 ycfH; TatD-type hydrolase YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HELO_1752 tatD; 3'-5' ssDNA/RNA exonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HELO_2684 alpha/beta hydrolase fold protein K01175 ybfF; esterase [EC:3.1.-.-]
D HELO_2799 arbA; alpha-L-arabinofuranosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D HELO_2964 glycosyl hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D HELO_4305 dacA2; D-alanyl-D-alanine carboxypeptidase DacA K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D HELO_1518 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D HELO_1376 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HELO_1075 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D HELO_2955 RutC family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HELO_1614 ygiF; inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D HELO_1993 yceF; Maf family protein YceF K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D HELO_1481 ribulose-bisphosphate carboxylase domain protein K01559 oiaT; 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase [EC:3.7.1.28]
D HELO_1049 dehydratase domain protein K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D HELO_3368 nnr; bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HELO_4211 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D HELO_3953 acyl-CoA synthetase family protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D HELO_2187 mpl; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D HELO_2729 rnfB; electron transport complex subunit RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D HELO_2215 nqrA; sodium-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D HELO_2216 nqrB; sodium-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D HELO_2217 nqrC; sodium-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D HELO_2218 nqrD; sodium-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D HELO_2219 nqrE; sodium-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D HELO_2220 nqrF; sodium-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D HELO_3542 P-type transport ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D HELO_1542 P-type transport ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D HELO_4119 sfsA; regulator protein SfsA K06206 sfsA; sugar fermentation stimulation protein A
D HELO_1210 homolog to lactose dehydrogenase small subunit K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D HELO_1896 fdhD; sulfurtransferase FdhD K02379 fdhD; FdhD protein
D HELO_3748 ferredoxin K05524 fdxA; ferredoxin
D HELO_3043 etfB; electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D HELO_1373 dodecin domain protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D HELO_1407 aidB; homolog to adaptive response protein AidB K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D HELO_4432 nrdI; ribonucleotide reductase maintenance protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D HELO_4418 cysZ; CysZ family transport protein (probable substrate sulfate) K06203 cysZ; CysZ protein
D HELO_4110 yaeR; glyoxalase domain protein YaeR K08234 yaeR; glyoxylase I family protein
D HELO_4114 UPF0001 family protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HELO_2868 LapA domain protein K08992 lapA; lipopolysaccharide assembly protein A
D HELO_2869 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D HELO_3106 glycosyltransferase domain protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D HELO_1831 cobW; CobW family protein K02234 cobW; cobalamin biosynthesis protein CobW
D HELO_4252 TPR domain protein K02498 hemY; HemY protein
D HELO_3773 ubiB; probable ubiquinone biosynthesis-associated protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D HELO_3772 ubiJ; ubiquinone biosynthesis protein UbiJ K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D HELO_1101 BMFP domain protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D HELO_1640 YhbT family protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D HELO_2980 mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D HELO_1768 ChrR family protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D HELO_3333 HpcH/GarL family aldolase K23376 sbnG; staphyloferrin B biosynthesis citrate synthase
C 99999 Others
D HELO_4297 DoxX domain protein K15977 K15977; putative oxidoreductase
D HELO_3656 DoxX domain protein K15977 K15977; putative oxidoreductase
D HELO_3879 DoxX domain protein K15977 K15977; putative oxidoreductase
D HELO_3239 estB; carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D HELO_2498 pka1; protein lysine acetyltransferase Pka K09181 yfiQ; acetyltransferase
D HELO_2616 pka2; protein lysine acetyltransferase Pka K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HELO_3431 cspA3; cold shock protein CspA K03704 cspA; cold shock protein
D HELO_3240 cspA2; cold shock protein CspA K03704 cspA; cold shock protein
D HELO_1644 cspA1; cold shock protein CspA K03704 cspA; cold shock protein
D HELO_3812 cspA4; cold shock protein CspA K03704 cspA; cold shock protein
D HELO_1690 AlgQ family protein K07740 rsd; regulator of sigma D
D HELO_1098 glnK1; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D HELO_1100 glnK2; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D HELO_1687 yhgF; Tex family protein YhgF K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D HELO_3062 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D HELO_2345 tig; trigger factor K03545 tig; trigger factor
D HELO_2280 ureE; urease maturation protein UreE K03187 ureE; urease accessory protein
D HELO_2281 ureF; urease maturation protein UreF K03188 ureF; urease accessory protein
D HELO_2282 ureG; urease maturation protein UreG K03189 ureG; urease accessory protein
D HELO_2276 ureD; urease maturation protein UreD K03190 ureD; urease accessory protein
D HELO_2283 ureJ; urease accessory protein UreJ K03192 ureJ; urease accessory protein
D HELO_4166 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HELO_4431 nrdH; glutaredoxinlutaredoxin-like protein NrdH-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D HELO_1102 comM; ComM family protein K07391 comM; magnesium chelatase family protein
D HELO_3134 hydroxylase domain protein K07394 K07394; SM-20-related protein
D HELO_2545 OsmC domain protein K07397 yhfA; putative redox protein
D HELO_3488 OsmC domain protein K07397 yhfA; putative redox protein
D HELO_2604 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D HELO_3604 thioredoxin domain protein K07401 K07401; selenoprotein W-related protein
D HELO_2464 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D HELO_1283 DUF182 domain protein K07402 xdhC; xanthine dehydrogenase accessory factor
D HELO_3647 PH1510-type membrane-bound protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D HELO_4102 HTH domain protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D HELO_3826 UPF0758 family protein K03630 radC; DNA repair protein RadC
D HELO_3993 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D HELO_1950 UPF0102 family protein K07460 yraN; putative endonuclease
D HELO_3379 UPF0213 family protein K07461 K07461; putative endonuclease
D HELO_1377 dprA; recombination mediator protein DprA K04096 smf; DNA processing protein
D HELO_4080 integrase family protein K07357 fimB; type 1 fimbriae regulatory protein FimB
D HELO_2094 phage terminase small subunit K07474 xtmA; phage terminase small subunit
D HELO_2093 phage terminase large subunit K06909 xtmB; phage terminase large subunit
D HELO_3053 rarA; DNA-dependent ATPase RarA K07478 ycaJ; putative ATPase
D HELO_4195 toprim domain protein K06919 K06919; putative DNA primase/helicase
D HELO_4194 uncharacterized protein K06919 K06919; putative DNA primase/helicase
D HELO_4207 integrase family protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D HELO_2056 ybaB; nucleoid-associated protein YbaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HELO_2804 major facilitator superfamily transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HELO_3126 HAE1 family transport protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D HELO_3358 betH; BCC family transport protein BetH (substrate glycine-betaine) K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D HELO_1580 betG; BCC family transport protein BetG (substrate glycine-betaine) K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D HELO_1132 major facilitator superfamily transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D HELO_1616 PHO4 family transport protein (probable substrate phosphate) K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HELO_1801 putP; SSS family transport protein (probable substrate proline) K03307 TC.SSS; solute:Na+ symporter, SSS family
D HELO_3259 SSS family transport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D HELO_3085 SSS family transport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D HELO_1516 SSS family transport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D HELO_2945 SSS family transport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D HELO_1521 SSS family transport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D HELO_2262 NSS family transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HELO_1214 NSS family transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HELO_4429 NSS family transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HELO_4313 NSS family transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HELO_1118 NSS family transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HELO_2528 SAF family transport protein (probable substrate alanine) K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HELO_1769 SAF family transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HELO_4397 panS; pantothenate precursor transport protein PanS K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D HELO_1594 NCS1 family transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D HELO_1595 NCS1 family transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D HELO_1295 NCS1 family transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D HELO_3158 nupC; CNT family transport protein (probable substrate purine nucleoside) K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D HELO_2380 uncharacterized protein K06351 kipI; inhibitor of KinA
D HELO_2783 Spo0M family protein K06377 spo0M; sporulation-control protein
D HELO_3531 ycgB; YcgB family protein K06415 spoVR; stage V sporulation protein R
D HELO_1029 peptidase M23 family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D HELO_1703 ProQ_Cterm domain protein K03607 proQ; ProP effector
D HELO_1754 UspA domain protein K06149 uspA; universal stress protein A
D HELO_2736 CstA family protein K06200 cstA; carbon starvation protein
D HELO_1121 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HELO_3390 ybeZ; PhoH family protein YbeZ K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D HELO_3237 YlaK family protein K07175 phoH2; PhoH-like ATPase
D HELO_3533 PrkA family protein K07180 prkA; serine protein kinase
D HELO_3442 DUF294 / CBS domain protein K07182 K07182; CBS domain-containing protein
D HELO_3546 DUF294 / CBS domain protein K07182 K07182; CBS domain-containing protein
D HELO_3388 YgiM family protein K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D HELO_3056 lolA; outer-membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D HELO_1879 lolB; lipoprotein localization system protein LolB K02494 lolB; outer membrane lipoprotein LolB
D HELO_2121 mlaA; probable phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D HELO_3072 slyB; outer membrane lipoprotein SlyB K06077 slyB; outer membrane lipoprotein SlyB
D HELO_3795 OmpH family protein K06142 hlpA; outer membrane protein
D HELO_3611 peptidase M23 family protein K06194 nlpD; lipoprotein NlpD
D HELO_2533 peptidase M23 family protein K06194 nlpD; lipoprotein NlpD
D HELO_2410 wcbO; capsular polysaccharide export protein WcbO K07265 kpsS; capsular polysaccharide export protein
D HELO_2399 LipA family protein K07266 kpsC; capsular polysaccharide export protein
D HELO_2411 wcbA; capsule polysaccharide modification protein WcbA K07266 kpsC; capsular polysaccharide export protein
D HELO_1459 OmpW family outer membrane protein K07275 ompW; outer membrane protein
D HELO_1799 OmpW family outer membrane protein K07275 ompW; outer membrane protein
D HELO_3762 DUF481 domain protein K07283 ydiY; putative salt-induced outer membrane protein
D HELO_3386 uncharacterized protein K07286 yajG; uncharacterized lipoprotein
D HELO_4018 AsmA family protein K07289 asmA; AsmA protein
D HELO_3726 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D HELO_3722 ccmI; cytochrome c-type biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D HELO_3723 ccmH; cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D HELO_1388 RodZ family protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D HELO_4419 phoU; regulator protein PhoU K02039 phoU; phosphate transport system protein
D HELO_1362 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D HELO_1814 opgD; glucan biosynthesis protein OpgD K03670 mdoG; periplasmic glucans biosynthesis protein
D HELO_3145 opgG; glucan biosynthesis protein OpgG K03670 mdoG; periplasmic glucans biosynthesis protein
D HELO_3481 apaG; ApaG family protein ApaG K06195 apaG; ApaG protein
D HELO_2414 hmuS; heme-binding protein HmuS K07225 hmuS; putative hemin transport protein
D HELO_2431 uncharacterized protein K07231 K07231; putative iron-regulated protein
D HELO_1863 pcoB; copper resistance protein PcoB K07233 pcoB; copper resistance protein B
D HELO_2848 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HELO_2243 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D HELO_2453 pqiB; PqiB family protein K06192 pqiB; paraquat-inducible protein B
D HELO_3400 rssA; NTE family protein RssA K07001 K07001; NTE family protein
D HELO_2891 uncharacterized protein K07001 K07001; NTE family protein
D HELO_4459 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D HELO_1784 sufB; iron-sulfur cluster assembly complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HELO_1786 sufD; iron-sulfur cluster assembly complex subunit sufD K09015 sufD; Fe-S cluster assembly protein SufD
D HELO_3882 DUF457 domain protein K07038 K07038; inner membrane protein
D HELO_2551 BrkB family protein K07058 K07058; membrane protein
D HELO_2285 BrkB family protein K07058 K07058; membrane protein
D HELO_1589 phosphoribosyltransferase domain protein K07100 K07100; putative phosphoribosyl transferase
D HELO_2873 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D HELO_2601 sufE; sulfur acceptor protein SufE K02426 sufE; cysteine desulfuration protein SufE
D HELO_3066 HflD family protein K07153 hflD; high frequency lysogenization protein
D HELO_3199 yjdN; PhnB protein K04750 phnB; PhnB protein
D HELO_1584 glcG; HbpS family protein GlcG K11477 glcG; glc operon protein GlcG
D HELO_1498 ArsH family oxidoreductase K11811 arsH; arsenical resistance protein ArsH
D HELO_3305 FhuF family protein K13255 fhuF; ferric iron reductase protein FhuF
D HELO_3813 SlyX family protein K03745 slyX; SlyX protein
D HELO_3564 sprT; SprT family protein K02742 sprT; SprT protein
D HELO_2242 uncharacterized protein K03749 dedD; DedD protein
D HELO_1789 sanA; SanA family protein K03748 sanA; SanA protein
D HELO_2454 PqiA family protein K03808 pqiA; paraquat-inducible protein A
D HELO_3612 DUF368 family protein K08974 K08974; putative membrane protein
D HELO_3089 UPF0283 family protein K08990 ycjF; putative membrane protein
D HELO_2470 UPF0225 family protein K09858 K09858; SEC-C motif domain protein
D HELO_1530 uncharacterized protein K09914 K09914; putative lipoprotein
D HELO_3681 MalM family protein K05775 malM; maltose operon periplasmic protein
D HELO_1772 phnA; PhnA family protein K06193 phnA; protein PhnA
C 99997 Function unknown
D HELO_3088 DUF463 family protein K06918 K06918; uncharacterized protein
D HELO_1382 DUF815 family protein K06923 K06923; uncharacterized protein
D HELO_2438 DUF1289 domain protein K06938 K06938; uncharacterized protein
D HELO_2441 UPF0153 family protein K06940 K06940; uncharacterized protein
D HELO_1327 uncharacterized protein K06950 K06950; uncharacterized protein
D HELO_3909 alpha/beta hydrolase fold protein K06978 K06978; uncharacterized protein
D HELO_2406 alpha/beta hydrolase fold protein K06978 K06978; uncharacterized protein
D HELO_3123 uncharacterized protein K06987 K06987; uncharacterized protein
D HELO_3433 glyoxalase domain protein K06991 K06991; uncharacterized protein
D HELO_3621 peptidase C39 family protein K06992 K06992; uncharacterized protein
D HELO_2152 glyoxalase domain protein K06996 K06996; uncharacterized protein
D HELO_1719 yqiA; esterase YqiA K07000 K07000; uncharacterized protein
D HELO_1474 DUF3616 domain / hydrolase domain protein K07004 K07004; uncharacterized protein
D HELO_2579 yheT; probable hydrolase YheT K07019 K07019; uncharacterized protein
D HELO_3535 alpha/beta hydrolase fold protein K07020 K07020; uncharacterized protein
D HELO_4465 uncharacterized protein K07028 K07028; uncharacterized protein
D HELO_1440 glyoxalase domain protein K07032 K07032; uncharacterized protein
D HELO_2032 glyoxalase domain protein K07032 K07032; uncharacterized protein
D HELO_3565 uncharacterized protein K07039 K07039; uncharacterized protein
D HELO_1212 DUF2387 domain protein K07070 K07070; uncharacterized protein
D HELO_1274 YfcH family protein K07071 K07071; uncharacterized protein
D HELO_1527 TRAP transporter substrate-binding protein K07080 K07080; uncharacterized protein
D HELO_1206 TRAP transporter substrate-binding protein K07080 K07080; uncharacterized protein
D HELO_3704 TRAP transporter substrate-binding protein K07080 K07080; uncharacterized protein
D HELO_4228 TRAP transporter substrate-binding protein K07080 K07080; uncharacterized protein
D HELO_4241 UPF0721 family protein K07090 K07090; uncharacterized protein
D HELO_1646 UPF0721 family protein K07090 K07090; uncharacterized protein
D HELO_1447 DUF81 family protein K07090 K07090; uncharacterized protein
D HELO_4306 DUF81 family protein K07090 K07090; uncharacterized protein
D HELO_1699 UPF0721 family protein K07090 K07090; uncharacterized protein
D HELO_3216 DUF839 family protein K07093 K07093; uncharacterized protein
D HELO_1496 phosphoesterase domain protein K07095 K07095; uncharacterized protein
D HELO_2732 YedE family protein K07112 K07112; uncharacterized protein
D HELO_3323 YwnB family protein K07118 K07118; uncharacterized protein
D HELO_1622 AbrB family protein K07120 K07120; uncharacterized protein
D HELO_2049 AbrB family protein K07120 K07120; uncharacterized protein
D HELO_1951 LpoA family protein K07121 K07121; uncharacterized protein
D HELO_2925 TPR domain protein K07126 K07126; uncharacterized protein
D HELO_1344 TPR domain protein K07126 K07126; uncharacterized protein
D HELO_4347 uncharacterized protein K07131 K07131; uncharacterized protein
D HELO_3135 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D HELO_2600 yidD; probable membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D HELO_1609 DUF192 family protein K09005 K09005; uncharacterized protein
D HELO_1348 DUF501 family protein K09009 K09009; uncharacterized protein
D HELO_2202 UPF0250 family protein K09158 K09158; uncharacterized protein
D HELO_2060 UPF0260 family protein K09160 K09160; uncharacterized protein
D HELO_3296 DUF2075 domain protein K09384 K09384; uncharacterized protein
D HELO_3193 UPF0178 family protein K09768 K09768; uncharacterized protein
D HELO_3713 yciI; YciI family protein K09780 K09780; uncharacterized protein
D HELO_1420 DUF808 family protein K09781 K09781; uncharacterized protein
D HELO_3532 UPF0229 family protein K09786 K09786; uncharacterized protein
D HELO_3438 DUF454 domain protein K09790 K09790; uncharacterized protein
D HELO_1982 UPF0434 family protein K09791 K09791; uncharacterized protein
D HELO_3543 uncharacterized protein K09792 K09792; uncharacterized protein
D HELO_4164 UPF0125 family protein K09801 K09801; uncharacterized protein
D HELO_1733 DUF541 family protein K09807 K09807; uncharacterized protein
D HELO_2221 DUF539 domain protein K05952 K05952; uncharacterized protein
D HELO_1057 YitL family protein K00243 K00243; uncharacterized protein
D HELO_2452 DUF330 family protein K09857 K09857; uncharacterized protein
D HELO_1342 UPF0246 family protein K09861 K09861; uncharacterized protein
D HELO_2712 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D HELO_4101 yjaG; DUF416 family protein YjaG K09891 K09891; uncharacterized protein
D HELO_1024 UPF0149 family protein K09895 K09895; uncharacterized protein
D HELO_3718 UPF0270 family protein K09898 K09898; uncharacterized protein
D HELO_2059 YcgL domain protein K09902 K09902; uncharacterized protein
D HELO_1809A DUF1315 domain protein K09916 K09916; uncharacterized protein
D HELO_3627 DUF482 domain protein K09919 K09919; uncharacterized protein
D HELO_1712 DUF1249 family protein K09920 K09920; uncharacterized protein
D HELO_4260 DUF484 family protein K09921 K09921; uncharacterized protein
D HELO_3541 FixH domain protein K09926 K09926; uncharacterized protein
D HELO_2593 DUF1006 domain protein K09927 K09927; uncharacterized protein
D HELO_1978 DUF2062 family protein K09928 K09928; uncharacterized protein
D HELO_3654 UPF0276 family protein K09930 K09930; uncharacterized protein
D HELO_3180 DUF1415 family protein K09941 K09941; uncharacterized protein
D HELO_2428 DUF1513 family protein K09947 K09947; uncharacterized protein
D HELO_2619 DUF1244 domain protein K09948 K09948; uncharacterized protein
D HELO_1442 DUF3820 family protein K09954 K09954; uncharacterized protein
D HELO_4153 DUF2218 family protein K09956 K09956; uncharacterized protein
D HELO_2090 DUF2213 domain protein K09960 K09960; uncharacterized protein
D HELO_2092 DUF1073 domain protein K09961 K09961; uncharacterized protein
D HELO_1436 DUF925 family protein K09962 K09962; uncharacterized protein
D HELO_2365 DUF1853 domain protein K09977 K09977; uncharacterized protein
D HELO_3680 DUF1993 family protein K09983 K09983; uncharacterized protein
D HELO_2315 uncharacterized protein K09989 K09989; uncharacterized protein
D HELO_3894 DUF2086 domain protein K09990 K09990; uncharacterized protein
D HELO_1615 UPF0111 family protein K07220 K07220; uncharacterized protein
D HELO_2429 uncharacterized protein K07338 K07338; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024