+D GENES KO
#
KEGG Orthology (KO) - Hyphococcus flavus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hfl00010]
D PUV54_08425 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PUV54_12730 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PUV54_14435 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PUV54_04240 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PUV54_14120 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PUV54_04250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PUV54_04245 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PUV54_04270 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PUV54_15620 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PUV54_00705 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PUV54_10240 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PUV54_15600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PUV54_13460 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PUV54_13480 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14605 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PUV54_14610 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PUV54_15500 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_15570 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_07090 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:hfl00020]
D PUV54_12675 bifunctional 2-methylcitrate synthase/citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PUV54_14175 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PUV54_08640 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PUV54_10350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PUV54_04410 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PUV54_04405 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_09420 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14605 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PUV54_14610 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PUV54_04415 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PUV54_04435 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PUV54_07385 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PUV54_07355 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PUV54_07395 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PUV54_07390 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PUV54_02575 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PUV54_07210 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PUV54_07090 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PUV54_15600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PUV54_13460 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PUV54_13480 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hfl00030]
D PUV54_08425 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PUV54_10925 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PUV54_04255 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PUV54_14595 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PUV54_08665 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PUV54_09385 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PUV54_09390 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_11525 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PUV54_08965 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PUV54_07065 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PUV54_08960 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PUV54_04240 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PUV54_14435 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PUV54_12730 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:hfl00040]
D PUV54_08955 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D PUV54_02655 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PUV54_14685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PUV54_10925 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PUV54_09175 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:hfl00051]
D PUV54_14390 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PUV54_10830 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_12730 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PUV54_14435 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PUV54_04240 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PUV54_14120 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PUV54_02130 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:hfl00052]
D PUV54_08865 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_10825 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_15080 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_14685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_12730 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PUV54_12145 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:hfl00053]
D PUV54_02655 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PUV54_07065 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PUV54_00865 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:hfl00500]
D PUV54_12145 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PUV54_14685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_08425 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PUV54_14390 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hfl00520]
D PUV54_11765 glycoside hydrolase family 3 N-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PUV54_14390 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PUV54_10840 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PUV54_04125 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PUV54_08670 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PUV54_02165 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PUV54_05190 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PUV54_05185 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PUV54_14795 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PUV54_10550 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PUV54_04660 N-acetylneuraminate synthase family protein K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_14685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PUV54_02655 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PUV54_08865 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_10825 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_15080 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_00865 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PUV54_02130 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PUV54_08425 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PUV54_10830 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:hfl00620]
D PUV54_15570 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PUV54_14605 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PUV54_14610 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PUV54_15600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PUV54_13460 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PUV54_13480 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_15500 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PUV54_00705 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PUV54_00800 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PUV54_02305 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PUV54_02310 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PUV54_05160 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_07155 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D PUV54_07035 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PUV54_08055 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PUV54_12380 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PUV54_05670 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PUV54_10380 NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PUV54_07210 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PUV54_02575 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PUV54_07090 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PUV54_10240 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PUV54_00875 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_12920 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hfl00630]
D PUV54_05285 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D PUV54_15570 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PUV54_00875 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PUV54_07210 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PUV54_12675 bifunctional 2-methylcitrate synthase/citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PUV54_14175 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PUV54_08640 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05080 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D PUV54_05415 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PUV54_08675 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PUV54_10690 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PUV54_11830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PUV54_03750 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PUV54_03740 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PUV54_02870 glycine cleavage T C-terminal barrel domain-containing protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_03765 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_03760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PUV54_12100 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D PUV54_08965 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PUV54_15465 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PUV54_15470 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PUV54_15475 NAD(P)H-dependent oxidoreductase subunit E K00127 fdoI; formate dehydrogenase subunit gamma
D PUV54_10170 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D PUV54_12060 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:hfl00640]
D PUV54_15570 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PUV54_10595 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PUV54_10600 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PUV54_09425 transketolase C-terminal domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PUV54_15175 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PUV54_10605 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_00800 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PUV54_02305 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PUV54_02310 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PUV54_05160 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PUV54_14630 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PUV54_08900 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PUV54_04435 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PUV54_04415 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PUV54_11625 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PUV54_12650 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D PUV54_12670 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:hfl00650]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_07660 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PUV54_09410 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_14445 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PUV54_07875 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D PUV54_05080 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D PUV54_07385 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PUV54_07355 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PUV54_07395 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PUV54_07390 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PUV54_14630 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PUV54_09250 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_15000 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_14605 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PUV54_14610 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PUV54_09090 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PUV54_10040 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PUV54_02780 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PUV54_02785 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PUV54_14715 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D PUV54_12910 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PUV54_12915 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:hfl00660]
D PUV54_12910 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PUV54_12915 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PUV54_04435 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PUV54_04415 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PUV54_12925 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PUV54_12930 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PUV54_12935 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hfl00562]
D PUV54_03885 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PUV54_11625 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PUV54_14120 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hfl00190]
D PUV54_01340 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PUV54_01335 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PUV54_01330 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PUV54_01320 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PUV54_01280 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PUV54_01250 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PUV54_01230 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PUV54_01205 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PUV54_01200 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PUV54_01185 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PUV54_01180 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PUV54_01175 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PUV54_01170 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PUV54_01165 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PUV54_07385 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PUV54_07355 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PUV54_07395 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PUV54_07390 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PUV54_14860 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PUV54_14855 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PUV54_14850 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PUV54_07775 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PUV54_07795 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PUV54_07760 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PUV54_07785 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PUV54_13080 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PUV54_06080 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PUV54_06075 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PUV54_06450 c-type cytochrome K08738 CYC; cytochrome c
D PUV54_11480 cytochrome c family protein K08738 CYC; cytochrome c
D PUV54_06600 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PUV54_06610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PUV54_06605 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PUV54_06595 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PUV54_06615 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PUV54_03700 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PUV54_03710 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PUV54_03715 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PUV54_03705 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PUV54_13420 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PUV54_05255 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:hfl00680]
D PUV54_15500 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PUV54_15480 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PUV54_15465 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PUV54_15470 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PUV54_15475 NAD(P)H-dependent oxidoreductase subunit E K00127 fdoI; formate dehydrogenase subunit gamma
D PUV54_11830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PUV54_15620 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PUV54_07210 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PUV54_04240 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PUV54_14435 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PUV54_12730 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PUV54_15570 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PUV54_04270 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PUV54_04080 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PUV54_04085 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PUV54_02500 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:hfl00910]
D PUV54_00700 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PUV54_02265 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_03995 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_10945 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PUV54_15245 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PUV54_10690 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PUV54_12855 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PUV54_12850 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PUV54_16060 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hfl00920]
D PUV54_12610 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PUV54_12615 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PUV54_02670 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PUV54_08205 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PUV54_08195 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PUV54_14320 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PUV54_09825 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PUV54_14315 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PUV54_15650 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PUV54_12875 homoserine O-succinyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PUV54_15380 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PUV54_12880 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PUV54_01800 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D PUV54_10810 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D PUV54_03480 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PUV54_10125 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hfl00061]
D PUV54_00800 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PUV54_02305 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PUV54_02310 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PUV54_05160 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PUV54_12330 acyl carrier protein K02078 acpP; acyl carrier protein
D PUV54_12320 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PUV54_11870 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PUV54_12175 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PUV54_05430 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PUV54_12335 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PUV54_12325 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PUV54_05425 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PUV54_13875 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PUV54_05440 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PUV54_00550 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hfl00071]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_09410 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PUV54_00685 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_04890 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_09095 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_11960 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_12110 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D PUV54_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PUV54_00550 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PUV54_06995 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PUV54_08990 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PUV54_15500 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hfl00561]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_16135 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PUV54_11865 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PUV54_15710 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PUV54_02640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PUV54_07590 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PUV54_03920 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:hfl00564]
D PUV54_06955 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PUV54_15710 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PUV54_02640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PUV54_07590 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PUV54_03905 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PUV54_05290 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PUV54_06115 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PUV54_06995 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PUV54_08820 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PUV54_13845 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PUV54_08815 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PUV54_11570 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:hfl00600]
D PUV54_09105 aminotransferase class V-fold PLP-dependent enzyme K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hfl00230]
D PUV54_09390 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_11525 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PUV54_11440 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PUV54_08730 phosphoribosylglycinamide synthetase C domain-containing protein K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PUV54_09665 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PUV54_13400 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PUV54_14505 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PUV54_16285 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PUV54_16295 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PUV54_13405 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PUV54_15925 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PUV54_15920 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PUV54_16275 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PUV54_14185 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PUV54_10940 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PUV54_15145 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PUV54_11805 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PUV54_09370 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PUV54_11530 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PUV54_07615 phosphoribosyltransferase family protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PUV54_12255 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PUV54_15385 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PUV54_05365 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PUV54_12275 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PUV54_12350 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PUV54_02335 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PUV54_08755 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PUV54_04535 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PUV54_11755 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PUV54_10295 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PUV54_11230 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PUV54_13425 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PUV54_15330 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PUV54_02415 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PUV54_04850 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PUV54_09360 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PUV54_15205 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PUV54_04065 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PUV54_05800 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PUV54_03810 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D PUV54_04930 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PUV54_13695 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PUV54_14310 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PUV54_12610 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PUV54_12615 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:hfl00240]
D PUV54_12370 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PUV54_12410 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PUV54_15700 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PUV54_00970 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PUV54_08130 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PUV54_11235 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PUV54_07015 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PUV54_13830 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PUV54_15385 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PUV54_14310 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PUV54_06035 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PUV54_14750 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PUV54_13440 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PUV54_08510 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PUV54_11805 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PUV54_12945 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PUV54_04930 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PUV54_09395 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PUV54_12940 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PUV54_08010 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PUV54_02335 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PUV54_08755 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PUV54_04535 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PUV54_10295 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PUV54_13950 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PUV54_06635 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PUV54_09400 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PUV54_08620 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PUV54_02535 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PUV54_09110 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PUV54_13015 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PUV54_05635 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hfl00250]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_10265 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PUV54_04275 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PUV54_12725 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PUV54_15580 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PUV54_12510 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PUV54_06935 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PUV54_07635 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PUV54_04065 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PUV54_14185 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PUV54_15700 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PUV54_14630 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PUV54_09250 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_15000 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_12855 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PUV54_12850 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PUV54_10945 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PUV54_15245 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PUV54_15405 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PUV54_10690 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PUV54_12370 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PUV54_12410 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PUV54_16295 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PUV54_10840 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PUV54_11440 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hfl00260]
D PUV54_09910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_11095 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_04465 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PUV54_12885 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PUV54_02060 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D PUV54_14705 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PUV54_15820 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PUV54_05730 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PUV54_11830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PUV54_04270 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PUV54_04080 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PUV54_04085 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PUV54_02500 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PUV54_15505 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PUV54_15510 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PUV54_00270 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PUV54_03750 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PUV54_03740 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PUV54_02870 glycine cleavage T C-terminal barrel domain-containing protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_03765 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_03760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PUV54_15595 solA; N-methyl-L-tryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D PUV54_10000 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PUV54_09985 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PUV54_12785 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PUV54_01035 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PUV54_06420 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PUV54_16240 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PUV54_05155 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PUV54_06880 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PUV54_09240 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PUV54_09920 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PUV54_09925 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D PUV54_09915 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:hfl00270]
D PUV54_09825 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PUV54_14315 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PUV54_15650 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PUV54_09985 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PUV54_02070 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PUV54_14330 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PUV54_10000 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PUV54_16555 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PUV54_16560 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PUV54_05575 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PUV54_07075 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PUV54_13190 hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PUV54_14845 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D PUV54_11530 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PUV54_09415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PUV54_01270 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PUV54_14570 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PUV54_10150 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PUV54_10985 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PUV54_09910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_11095 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_04465 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PUV54_12885 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PUV54_12875 homoserine O-succinyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PUV54_15380 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PUV54_12880 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PUV54_14305 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PUV54_04765 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PUV54_06670 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_14320 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PUV54_16240 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PUV54_07210 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PUV54_12785 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PUV54_04080 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PUV54_04085 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hfl00280]
D PUV54_14305 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PUV54_13270 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PUV54_10595 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PUV54_10600 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PUV54_09425 transketolase C-terminal domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PUV54_15175 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PUV54_10605 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_00685 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_04890 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_09095 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_11960 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PUV54_02370 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_11680 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PUV54_11625 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_16330 AMP-binding protein K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D PUV54_08900 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PUV54_14630 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PUV54_10045 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D PUV54_10065 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PUV54_10060 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D PUV54_09090 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PUV54_10040 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PUV54_02780 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PUV54_02785 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hfl00290]
D PUV54_01035 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PUV54_06420 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PUV54_12925 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PUV54_12930 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PUV54_12935 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PUV54_12910 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PUV54_12915 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PUV54_12905 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PUV54_12900 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PUV54_14305 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PUV54_13270 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PUV54_12920 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hfl00300]
D PUV54_12885 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PUV54_09910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_11095 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_04465 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PUV54_11195 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PUV54_05925 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PUV54_06555 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PUV54_06545 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PUV54_08625 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PUV54_07630 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PUV54_09050 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PUV54_10510 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PUV54_10515 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hfl00310]
D PUV54_14005 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D PUV54_04405 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_09420 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_16240 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PUV54_14630 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PUV54_09250 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_15000 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_12585 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:hfl00220]
D PUV54_02840 N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D PUV54_06935 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PUV54_07635 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PUV54_06310 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D PUV54_16295 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PUV54_10690 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PUV54_12370 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PUV54_12410 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PUV54_10945 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PUV54_15245 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_02830 acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8]
D PUV54_02825 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PUV54_08845 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:hfl00330]
D PUV54_02170 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D PUV54_12940 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PUV54_08810 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PUV54_15755 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PUV54_04520 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PUV54_08795 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PUV54_07075 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PUV54_09045 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_11030 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_09100 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_13240 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PUV54_13255 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D PUV54_13245 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D PUV54_06310 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D PUV54_11555 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PUV54_15405 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PUV54_12890 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PUV54_12895 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PUV54_02420 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PUV54_02440 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_12585 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PUV54_09140 proline racemase family protein K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77]
C 00340 Histidine metabolism [PATH:hfl00340]
D PUV54_14810 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PUV54_06350 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PUV54_08145 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PUV54_06335 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PUV54_06330 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PUV54_06345 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PUV54_06305 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PUV54_03835 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_08065 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_14785 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PUV54_09130 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PUV54_09135 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PUV54_16105 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PUV54_09125 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D PUV54_12060 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:hfl00350]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_03835 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_08065 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_09415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PUV54_10710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PUV54_00630 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PUV54_10705 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PUV54_00615 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D PUV54_15500 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PUV54_09250 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_15000 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_14575 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D PUV54_01395 malate/lactate/ureidoglycolate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:hfl00360]
D PUV54_11990 paaF; phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D PUV54_12005 paaI; hydroxyphenylacetyl-CoA thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D PUV54_12030 paaA; 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D PUV54_12035 paaB; 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D PUV54_12040 paaC; phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D PUV54_12045 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D PUV54_12050 paaK; phenylacetate-CoA oxygenase/reductase subunit PaaK K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D PUV54_12000 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PUV54_14995 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PUV54_11995 paaZ; phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_07660 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_03835 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_08065 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_09415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PUV54_10710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PUV54_09170 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D PUV54_12585 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PUV54_01395 malate/lactate/ureidoglycolate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D PUV54_12020 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D PUV54_11030 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_09100 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_08990 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PUV54_08935 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:hfl00380]
D PUV54_10170 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D PUV54_06735 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3]
D PUV54_10165 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3]
D PUV54_04405 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_09420 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_02265 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_03995 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_11030 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_09100 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_12020 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hfl00400]
D PUV54_02805 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PUV54_00825 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PUV54_02300 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PUV54_06030 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PUV54_00820 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PUV54_08505 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PUV54_09580 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PUV54_14130 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PUV54_08250 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PUV54_14145 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PUV54_14150 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PUV54_06870 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PUV54_14155 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PUV54_05155 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PUV54_06880 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PUV54_08070 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PUV54_06455 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_03835 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_08065 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_09415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:hfl00410]
D PUV54_14630 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09110 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PUV54_13015 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PUV54_08900 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_11625 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:hfl00430]
D PUV54_09935 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_10450 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_12510 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PUV54_10945 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism [PATH:hfl00440]
D PUV54_00930 GNAT family N-acetyltransferase K03823 pat; phosphinothricin acetyltransferase [EC:2.3.1.183]
D PUV54_13935 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:hfl00450]
D PUV54_12880 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PUV54_02070 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PUV54_14330 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PUV54_16555 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PUV54_16560 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PUV54_09985 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PUV54_01270 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PUV54_00735 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PUV54_00635 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PUV54_13295 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PUV54_12610 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PUV54_12615 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PUV54_16140 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PUV54_13355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hfl00460]
D PUV54_02265 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_03995 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_09935 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_10450 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_04275 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PUV54_12725 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PUV54_11830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hfl00470]
D PUV54_12290 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PUV54_12585 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PUV54_10555 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PUV54_16240 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PUV54_16295 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PUV54_10525 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PUV54_08625 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PUV54_07630 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PUV54_09050 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PUV54_09165 proline racemase family protein K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D PUV54_09160 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D PUV54_09170 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:hfl00480]
D PUV54_09935 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_10450 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_07560 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PUV54_15310 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D PUV54_04765 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PUV54_06670 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PUV54_00515 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PUV54_07575 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PUV54_13925 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PUV54_02680 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_03295 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_03690 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_06095 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_06760 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_08190 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_09485 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_09765 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_11930 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_08655 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PUV54_10350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PUV54_15795 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D PUV54_08795 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PUV54_07075 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:hfl00540]
D PUV54_13880 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PUV54_10575 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PUV54_13870 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PUV54_13885 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PUV54_13890 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PUV54_09730 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PUV54_13810 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PUV54_13815 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PUV54_08875 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PUV54_09735 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PUV54_09725 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PUV54_06575 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hfl00541]
D PUV54_14685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PUV54_08865 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_10825 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_15080 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PUV54_02655 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PUV54_00865 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PUV54_03980 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PUV54_03970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PUV54_04540 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PUV54_03975 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PUV54_10830 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PUV54_08670 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PUV54_04660 N-acetylneuraminate synthase family protein K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
C 00550 Peptidoglycan biosynthesis [PATH:hfl00550]
D PUV54_14795 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PUV54_10550 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PUV54_04455 Mur ligase family protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PUV54_10540 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PUV54_10525 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PUV54_10510 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PUV54_10555 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PUV54_10515 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PUV54_13840 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PUV54_01040 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PUV54_11800 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PUV54_10520 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PUV54_10535 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PUV54_10200 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PUV54_03185 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_04330 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_12995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_00335 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PUV54_02460 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PUV54_10505 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PUV54_13955 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PUV54_15565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:hfl00552]
D PUV54_01040 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PUV54_11800 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hfl00543]
D PUV54_09825 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hfl00730]
D PUV54_04035 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PUV54_04100 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PUV54_00775 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PUV54_02350 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PUV54_09555 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PUV54_02290 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PUV54_04230 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PUV54_06205 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PUV54_11845 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PUV54_13695 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:hfl00740]
D PUV54_05025 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PUV54_15900 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:hfl00750]
D PUV54_09585 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PUV54_04085 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PUV54_00540 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PUV54_11240 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PUV54_02060 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D PUV54_14705 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PUV54_15820 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hfl00760]
D PUV54_10265 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PUV54_10275 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PUV54_10260 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PUV54_09370 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PUV54_06820 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PUV54_11805 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PUV54_14310 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PUV54_06460 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PUV54_02770 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PUV54_12550 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PUV54_11020 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PUV54_11465 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PUV54_15960 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PUV54_15965 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PUV54_15955 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PUV54_09250 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PUV54_15000 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:hfl00770]
D PUV54_12910 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PUV54_12915 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PUV54_12905 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PUV54_12900 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PUV54_01155 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PUV54_06835 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PUV54_14310 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PUV54_15020 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PUV54_06025 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PUV54_11250 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PUV54_14305 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PUV54_09110 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PUV54_13015 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:hfl00780]
D PUV54_05430 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PUV54_12335 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PUV54_12325 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PUV54_13875 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PUV54_05440 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PUV54_05780 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PUV54_07270 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D PUV54_01160 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hfl00785]
D PUV54_13765 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PUV54_12525 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_15600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PUV54_13460 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PUV54_13480 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PUV54_04410 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PUV54_04405 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_09420 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PUV54_10595 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PUV54_10600 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PUV54_09425 transketolase C-terminal domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PUV54_15175 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PUV54_10605 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PUV54_03750 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PUV54_03740 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PUV54_02870 glycine cleavage T C-terminal barrel domain-containing protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_03765 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_03760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:hfl00790]
D PUV54_12680 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PUV54_03800 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PUV54_11600 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PUV54_11220 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PUV54_04130 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PUV54_02530 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PUV54_05165 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PUV54_08245 anthranilate synthase component I family protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PUV54_10760 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PUV54_02145 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PUV54_10755 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PUV54_10750 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PUV54_09840 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PUV54_15450 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PUV54_15430 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PUV54_15440 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PUV54_15435 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PUV54_15425 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PUV54_10890 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D PUV54_15420 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:hfl00670]
D PUV54_02530 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PUV54_15455 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PUV54_10915 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PUV54_11830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PUV54_13400 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PUV54_10940 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PUV54_06535 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PUV54_02870 glycine cleavage T C-terminal barrel domain-containing protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_03765 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PUV54_16555 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PUV54_16560 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PUV54_02535 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PUV54_04925 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hfl00860]
D PUV54_00270 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PUV54_02765 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_14170 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_00280 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PUV54_06975 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PUV54_06980 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PUV54_06045 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PUV54_14875 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PUV54_06050 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PUV54_05695 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PUV54_08180 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PUV54_07775 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PUV54_13080 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PUV54_13035 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D PUV54_15155 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D PUV54_04375 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PUV54_09715 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hfl00130]
D PUV54_04780 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PUV54_09795 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PUV54_15900 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PUV54_11090 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PUV54_05910 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PUV54_06855 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PUV54_06360 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PUV54_10710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hfl00900]
D PUV54_09555 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PUV54_13850 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PUV54_12555 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D PUV54_08370 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PUV54_11110 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PUV54_13205 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PUV54_15785 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15900 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PUV54_13215 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PUV54_16170 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PUV54_08380 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PUV54_13840 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:hfl00909]
D PUV54_16320 shc; squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:hfl00906]
D PUV54_02600 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PUV54_16180 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PUV54_16185 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D PUV54_16190 crtY; lycopene beta-cyclase CrtY K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D PUV54_16175 sterol desaturase family protein K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
D PUV54_05885 fatty acid desaturase K02294 crtR; beta-carotene hydroxylase [EC:1.14.13.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:hfl00903]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_00600 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D PUV54_08785 alpha/beta hydrolase fold domain-containing protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:hfl00907]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_09470 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D PUV54_00660 acyl-CoA dehydrogenase family protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D PUV54_00650 acetyl-CoA carboxylase biotin carboxylase subunit K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D PUV54_00665 carboxyl transferase domain-containing protein K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D PUV54_00655 enoyl-CoA hydratase/isomerase family protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D PUV54_09090 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PUV54_10040 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PUV54_04255 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:hfl00523]
D PUV54_03980 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PUV54_03970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PUV54_04540 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PUV54_03975 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:hfl01055]
D PUV54_13505 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D PUV54_03970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:hfl00332]
D PUV54_12890 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PUV54_12895 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hfl00261]
D PUV54_13505 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D PUV54_01650 MbtH family protein K05375 mbtH; MbtH protein
D PUV54_12610 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PUV54_12615 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PUV54_09910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_11095 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PUV54_04465 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PUV54_11195 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PUV54_05925 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hfl00521]
D PUV54_12190 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PUV54_03885 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PUV54_03980 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PUV54_03970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PUV54_04540 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PUV54_03975 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:hfl00525]
D PUV54_03980 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PUV54_03970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hfl00401]
D PUV54_08070 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_03835 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_08065 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_09415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:hfl00405]
D PUV54_04095 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D PUV54_14130 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PUV54_08250 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PUV54_14145 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PUV54_12320 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PUV54_12325 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PUV54_05440 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PUV54_12330 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hfl00999]
D PUV54_05575 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PUV54_06030 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:hfl00362]
D PUV54_12010 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D PUV54_08935 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D PUV54_03305 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PUV54_03575 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PUV54_09410 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PUV54_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_07660 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:hfl00627]
D PUV54_11030 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_09100 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_02265 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_03995 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_15900 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PUV54_11975 AMP-binding protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D PUV54_11950 hypothetical protein K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:hfl00364]
D PUV54_06900 yghX; YghX family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:hfl00625]
D PUV54_14275 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D PUV54_15500 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PUV54_09115 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PUV54_09380 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hfl00361]
D PUV54_14275 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D PUV54_06900 yghX; YghX family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:hfl00623]
D PUV54_06900 yghX; YghX family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:hfl00622]
D PUV54_03305 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PUV54_03575 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PUV54_08935 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:hfl00643]
D PUV54_00630 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PUV54_10705 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PUV54_00615 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D PUV54_11030 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_09100 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PUV54_02265 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PUV54_03995 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:hfl00930]
D PUV54_03825 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D PUV54_07065 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PUV54_00600 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D PUV54_08785 alpha/beta hydrolase fold domain-containing protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D PUV54_11980 acyl-CoA dehydrogenase family protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PUV54_12685 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PUV54_15395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:hfl00621]
D PUV54_03305 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PUV54_03575 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PUV54_08935 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:hfl00626]
D PUV54_15500 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hfl03020]
D PUV54_13545 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PUV54_13555 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PUV54_13710 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PUV54_11225 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hfl03010]
D PUV54_08515 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PUV54_13620 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PUV54_10395 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PUV54_13675 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PUV54_12310 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PUV54_13570 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PUV54_13660 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PUV54_13125 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PUV54_13585 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PUV54_13705 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PUV54_13565 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PUV54_13700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PUV54_13655 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PUV54_05480 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PUV54_13635 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PUV54_12305 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PUV54_13610 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PUV54_08525 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PUV54_15935 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PUV54_13490 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PUV54_13605 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PUV54_13595 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PUV54_13650 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PUV54_13665 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PUV54_13540 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PUV54_12300 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PUV54_13535 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PUV54_13485 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PUV54_13120 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PUV54_13640 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PUV54_13685 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PUV54_13625 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PUV54_13715 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PUV54_13670 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PUV54_07285 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PUV54_07450 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PUV54_08605 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PUV54_13615 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PUV54_13600 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PUV54_13645 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PUV54_14825 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PUV54_08600 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PUV54_00300 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PUV54_13630 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PUV54_13680 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PUV54_15830 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PUV54_15630 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PUV54_14195 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PUV54_09955 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PUV54_07445 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PUV54_15995 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PUV54_00390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hfl00970]
D PUV54_00400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PUV54_08555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PUV54_00345 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PUV54_02095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PUV54_03465 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PUV54_12130 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PUV54_06375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PUV54_00235 tRNA-Met K14230 tRNA-Met; tRNA Met
D PUV54_11900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PUV54_08610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PUV54_11485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PUV54_14805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PUV54_13895 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PUV54_11940 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PUV54_02765 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_14170 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_15675 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PUV54_15660 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PUV54_15680 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PUV54_10335 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PUV54_15295 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PUV54_10185 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PUV54_10220 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PUV54_05130 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PUV54_11795 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PUV54_08150 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PUV54_13355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PUV54_06535 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PUV54_11415 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PUV54_06185 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PUV54_05015 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PUV54_08105 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PUV54_15775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PUV54_13785 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PUV54_08445 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PUV54_07465 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PUV54_07480 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PUV54_02175 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PUV54_04300 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hfl03060]
D PUV54_13690 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PUV54_13905 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PUV54_13445 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PUV54_02615 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PUV54_02610 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PUV54_02620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PUV54_09965 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PUV54_11035 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PUV54_06265 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PUV54_07165 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PUV54_06705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PUV54_11780 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PUV54_11785 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PUV54_11790 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PUV54_11255 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PUV54_05010 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hfl04122]
D PUV54_00775 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PUV54_14320 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PUV54_06390 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PUV54_00255 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PUV54_15440 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PUV54_15450 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PUV54_15445 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D PUV54_05390 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PUV54_15430 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PUV54_15435 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PUV54_02295 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:hfl03018]
D PUV54_06805 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PUV54_12985 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PUV54_15620 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PUV54_05470 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PUV54_15735 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PUV54_06065 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PUV54_01150 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PUV54_05950 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PUV54_05055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PUV54_12590 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PUV54_13420 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PUV54_05255 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PUV54_10805 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hfl03030]
D PUV54_06260 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PUV54_14690 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PUV54_06495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PUV54_13945 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PUV54_06175 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PUV54_00495 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PUV54_08535 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PUV54_12295 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PUV54_12445 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PUV54_15095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PUV54_15790 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PUV54_03585 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PUV54_07910 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PUV54_10590 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hfl03410]
D PUV54_07020 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PUV54_03625 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PUV54_08520 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PUV54_04760 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PUV54_00985 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PUV54_08345 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PUV54_11210 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PUV54_06740 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PUV54_11725 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PUV54_07910 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PUV54_14410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PUV54_10590 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hfl03420]
D PUV54_14100 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PUV54_15100 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PUV54_12805 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PUV54_11590 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PUV54_11155 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PUV54_07910 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PUV54_10590 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hfl03430]
D PUV54_04320 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PUV54_05000 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PUV54_11155 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PUV54_09695 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PUV54_09540 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PUV54_14410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PUV54_15095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PUV54_14690 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PUV54_08535 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PUV54_06495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PUV54_06175 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PUV54_13945 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PUV54_06260 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PUV54_00495 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PUV54_10590 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:hfl03440]
D PUV54_14410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PUV54_15095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PUV54_08540 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PUV54_11275 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PUV54_06515 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PUV54_10325 recA; recombinase RecA K03553 recA; recombination protein RecA
D PUV54_07910 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PUV54_04210 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PUV54_04200 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PUV54_04215 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PUV54_14675 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PUV54_14690 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PUV54_08535 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PUV54_06495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PUV54_06175 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PUV54_13945 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PUV54_06260 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PUV54_00495 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PUV54_06570 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hfl02010]
D PUV54_00880 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PUV54_00885 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D PUV54_00890 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PUV54_03775 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PUV54_03785 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PUV54_03780 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PUV54_10415 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PUV54_13225 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PUV54_02325 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PUV54_02400 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PUV54_02410 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PUV54_12285 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PUV54_02405 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PUV54_12280 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PUV54_01710 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PUV54_01715 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PUV54_01720 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PUV54_04630 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PUV54_07980 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D PUV54_07975 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D PUV54_13790 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D PUV54_13795 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PUV54_12965 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D PUV54_12960 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PUV54_12955 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PUV54_00520 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D PUV54_06685 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D PUV54_00525 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PUV54_06690 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PUV54_01010 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PUV54_07600 hypothetical protein K09811 ftsX; cell division transport system permease protein
D PUV54_07605 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PUV54_09745 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PUV54_11690 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PUV54_04705 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_09330 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_09335 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_04555 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PUV54_09445 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:hfl02060]
D PUV54_02130 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PUV54_11100 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PUV54_02125 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D PUV54_01025 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hfl03070]
D PUV54_01665 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_11400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_14970 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D PUV54_14975 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D PUV54_14960 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D PUV54_14955 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D PUV54_14950 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D PUV54_14945 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D PUV54_14940 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D PUV54_14935 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D PUV54_14930 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D PUV54_14925 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D PUV54_14965 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PUV54_02615 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PUV54_02610 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PUV54_13905 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PUV54_13445 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PUV54_13690 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PUV54_02620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PUV54_09965 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PUV54_11035 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PUV54_06705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PUV54_06265 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PUV54_07165 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PUV54_11780 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PUV54_11785 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PUV54_11790 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PUV54_01500 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hfl02020]
D PUV54_05225 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PUV54_05235 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PUV54_03800 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PUV54_11560 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PUV54_11565 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PUV54_02505 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_02905 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_01965 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PUV54_01960 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D PUV54_16485 flagellin K02406 fliC; flagellin
D PUV54_16430 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PUV54_13080 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PUV54_08530 DnaA/Hda family protein K02313 dnaA; chromosomal replication initiator protein
D PUV54_02135 ATP-binding protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PUV54_02140 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D PUV54_08690 ATP-binding protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PUV54_06480 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PUV54_05450 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PUV54_06910 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PUV54_08275 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PUV54_11050 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PUV54_08285 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PUV54_08290 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D PUV54_08300 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE
D PUV54_08305 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PUV54_08310 type II secretion system F family protein K12510 tadB; tight adherence protein B
D PUV54_08315 type II secretion system F family protein K12511 tadC; tight adherence protein C
D PUV54_08045 TadG family pilus assembly protein K27080 tadG; tight adherence protein G
D PUV54_04310 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PUV54_00940 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D PUV54_01915 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D PUV54_10690 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PUV54_12565 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PUV54_12570 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_01015 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PUV54_14425 ATP-binding protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D PUV54_01045 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PUV54_02845 histidine kinase dimerization/phospho-acceptor domain-containing protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D PUV54_14200 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D PUV54_14205 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D PUV54_06255 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PUV54_01050 histidine phosphotransferase family protein K13588 chpT; histidine phosphotransferase ChpT
D PUV54_10480 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PUV54_03930 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D PUV54_02450 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D PUV54_08270 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PUV54_15195 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PUV54_07865 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PUV54_07860 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D PUV54_14860 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PUV54_14855 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PUV54_14850 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PUV54_06450 c-type cytochrome K08738 CYC; cytochrome c
D PUV54_11480 cytochrome c family protein K08738 CYC; cytochrome c
D PUV54_06080 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PUV54_06075 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PUV54_01665 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_11400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_02225 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PUV54_11005 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PUV54_01370 FecR domain-containing protein K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:hfl04148]
D PUV54_06310 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D PUV54_08795 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PUV54_14860 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hfl02024]
D PUV54_02450 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D PUV54_12590 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PUV54_14130 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PUV54_08250 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PUV54_14145 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PUV54_02805 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PUV54_04095 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D PUV54_01490 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PUV54_01485 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PUV54_01480 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PUV54_01475 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PUV54_01470 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PUV54_01465 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PUV54_01460 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PUV54_01455 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PUV54_01450 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D PUV54_16130 N-acyl homoserine lactonase family protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D PUV54_00550 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PUV54_08270 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PUV54_15195 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PUV54_03770 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PUV54_09440 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PUV54_14880 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PUV54_14885 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PUV54_14890 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PUV54_09965 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PUV54_13905 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PUV54_13445 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PUV54_13690 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PUV54_02620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PUV54_11035 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PUV54_06705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PUV54_06265 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PUV54_07165 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hfl02030]
D PUV54_01045 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PUV54_16390 FliG C-terminal domain-containing protein K02410 fliG; flagellar motor switch protein FliG
D PUV54_16400 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PUV54_16430 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PUV54_07840 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PUV54_16360 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hfl02040]
D PUV54_16520 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PUV54_16410 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D PUV54_16390 FliG C-terminal domain-containing protein K02410 fliG; flagellar motor switch protein FliG
D PUV54_16505 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PUV54_16460 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D PUV54_16400 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PUV54_02210 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PUV54_16395 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PUV54_16525 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PUV54_16535 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PUV54_16530 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PUV54_16540 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PUV54_16450 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PUV54_16510 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB
D PUV54_16515 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PUV54_16465 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PUV54_16365 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D PUV54_16440 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D PUV54_16445 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PUV54_16455 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PUV54_16380 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PUV54_16475 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D PUV54_16370 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PUV54_16375 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D PUV54_16485 flagellin K02406 fliC; flagellin
D PUV54_16430 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PUV54_07840 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PUV54_16360 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PUV54_12450 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PUV54_01015 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PUV54_15620 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:hfl04980]
D PUV54_04375 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PUV54_16555 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PUV54_16560 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hfl01501]
D PUV54_06010 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PUV54_11765 glycoside hydrolase family 3 N-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PUV54_06480 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PUV54_13370 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D PUV54_02110 peptidoglycan DD-metalloendopeptidase family protein K02172 blaR1; bla regulator protein blaR1
D PUV54_13375 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PUV54_02105 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PUV54_02120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PUV54_09440 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PUV54_01665 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_11400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_03185 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_04330 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_12995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_02460 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PUV54_10505 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PUV54_05370 bla; subclass B1 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:hfl01502]
D PUV54_10555 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PUV54_12290 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PUV54_10515 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PUV54_10520 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PUV54_10535 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hfl01503]
D PUV54_04600 M10 family metallopeptidase K01406 prtC; serralysin [EC:3.4.24.40]
D PUV54_12990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PUV54_02505 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_02905 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_02120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PUV54_01665 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_11400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_13880 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hfl01000]
C 01001 Protein kinases [BR:hfl01001]
D PUV54_01845 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PUV54_02235 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PUV54_02740 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PUV54_05225 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PUV54_11560 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PUV54_02135 ATP-binding protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PUV54_08690 ATP-binding protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PUV54_12565 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PUV54_14425 ATP-binding protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D PUV54_02845 histidine kinase dimerization/phospho-acceptor domain-containing protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D PUV54_06255 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PUV54_07865 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PUV54_09300 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
C 01009 Protein phosphatases and associated proteins [BR:hfl01009]
D PUV54_10985 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PUV54_02500 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:hfl01002]
D PUV54_05010 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PUV54_14990 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PUV54_08280 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PUV54_12275 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PUV54_11440 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PUV54_12855 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PUV54_10840 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PUV54_15580 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PUV54_03825 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D PUV54_06355 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D PUV54_15750 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PUV54_05955 hypothetical protein K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PUV54_04600 M10 family metallopeptidase K01406 prtC; serralysin [EC:3.4.24.40]
D PUV54_05875 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PUV54_10360 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PUV54_12365 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PUV54_15150 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PUV54_04075 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PUV54_05850 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PUV54_07855 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PUV54_00515 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PUV54_07575 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PUV54_13925 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PUV54_07380 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PUV54_09455 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PUV54_13235 hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PUV54_06545 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PUV54_13005 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D PUV54_12745 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PUV54_09150 Xaa-Pro peptidase family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PUV54_09245 doeA; ectoine hydrolase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PUV54_11140 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PUV54_04145 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PUV54_07965 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PUV54_16235 M48 family metallopeptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PUV54_13855 RIP metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PUV54_13370 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D PUV54_02110 peptidoglycan DD-metalloendopeptidase family protein K02172 blaR1; bla regulator protein blaR1
D PUV54_10630 zinc-dependent peptidase K09933 mtfA; MtfA peptidase
D PUV54_07460 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D PUV54_08915 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D PUV54_02505 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_02905 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_05870 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PUV54_11410 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PUV54_15740 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PUV54_13955 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PUV54_15565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PUV54_00915 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PUV54_00905 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PUV54_14160 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PUV54_11255 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PUV54_02420 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PUV54_02440 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PUV54_04495 alpha/beta hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D PUV54_06795 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PUV54_10790 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D PUV54_04460 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PUV54_00130 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D PUV54_02995 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D PUV54_06300 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PUV54_12250 hypothetical protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PUV54_04275 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PUV54_12725 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PUV54_09935 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_10450 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PUV54_09760 TldD/PmbA family protein K03592 pmbA; PmbA protein
D PUV54_07750 tldD; metalloprotease TldD K03568 tldD; TldD protein
D PUV54_00340 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D PUV54_02510 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D PUV54_02515 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:hfl01003]
D PUV54_03920 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D PUV54_10200 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PUV54_00335 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PUV54_03185 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_04330 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_12995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hfl01005]
D PUV54_13880 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PUV54_13890 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PUV54_10575 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PUV54_13870 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PUV54_13885 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PUV54_09730 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PUV54_09725 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PUV54_09735 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PUV54_06575 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PUV54_13815 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PUV54_08875 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PUV54_13810 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PUV54_04295 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hfl01011]
D PUV54_14795 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PUV54_10550 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PUV54_04455 Mur ligase family protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PUV54_10540 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PUV54_10525 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PUV54_10510 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PUV54_10555 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PUV54_12290 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PUV54_04460 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PUV54_10520 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PUV54_10535 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PUV54_01040 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PUV54_11800 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PUV54_04305 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PUV54_03185 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_04330 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_12995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PUV54_00335 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PUV54_02460 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PUV54_10505 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PUV54_13955 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PUV54_15565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PUV54_10200 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PUV54_11190 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PUV54_06280 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D PUV54_10025 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PUV54_12340 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PUV54_13960 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PUV54_14230 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PUV54_12990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hfl01004]
D PUV54_12320 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PUV54_11870 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PUV54_12175 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PUV54_05430 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PUV54_12335 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PUV54_12325 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PUV54_05425 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PUV54_13875 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PUV54_05440 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PUV54_05450 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PUV54_06910 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PUV54_15570 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PUV54_00550 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PUV54_05765 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PUV54_11865 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PUV54_15710 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PUV54_02640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PUV54_07590 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:hfl01008]
D PUV54_01650 MbtH family protein K05375 mbtH; MbtH protein
D PUV54_13505 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:hfl01006]
D PUV54_13215 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PUV54_16170 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PUV54_08380 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PUV54_13840 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PUV54_02600 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PUV54_16180 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PUV54_02495 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PUV54_04780 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PUV54_07775 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:hfl01007]
D PUV54_08105 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PUV54_02765 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_14170 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_07730 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PUV54_02175 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PUV54_04300 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PUV54_08150 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PUV54_15775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PUV54_13355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PUV54_05015 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PUV54_11415 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PUV54_06185 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PUV54_15295 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PUV54_08445 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PUV54_10185 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PUV54_10220 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PUV54_11795 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PUV54_13785 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PUV54_05130 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PUV54_10335 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PUV54_07465 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PUV54_07480 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PUV54_11500 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PUV54_12860 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D PUV54_09415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PUV54_03835 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_08065 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PUV54_15505 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PUV54_00270 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PUV54_05780 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PUV54_08900 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PUV54_14630 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PUV54_09240 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PUV54_09920 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PUV54_09045 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PUV54_12585 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PUV54_14305 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PUV54_04085 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hfl00194]
D PUV54_06615 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PUV54_06610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PUV54_06605 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PUV54_06600 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PUV54_06595 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PUV54_03710 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PUV54_03715 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PUV54_03705 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PUV54_03700 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PUV54_03695 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hfl03000]
D PUV54_10150 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PUV54_10475 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PUV54_08175 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PUV54_03195 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PUV54_08235 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PUV54_03320 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D PUV54_08945 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PUV54_09120 UTRA domain-containing protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PUV54_13265 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PUV54_07425 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PUV54_05620 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PUV54_03770 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PUV54_08270 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PUV54_15195 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PUV54_00780 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PUV54_15045 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PUV54_07340 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PUV54_05280 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D PUV54_13375 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PUV54_02105 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PUV54_01160 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PUV54_06820 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PUV54_16225 sigma-54 dependent transcriptional regulator K18219 txr; sigma-54 dependent transcriptional regulator, tetracycline resistant transcriptional regulator
D PUV54_05345 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D PUV54_07890 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D PUV54_03550 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PUV54_04965 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PUV54_06490 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PUV54_11890 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PUV54_15405 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PUV54_01995 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PUV54_13525 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PUV54_13050 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PUV54_01620 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PUV54_06160 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PUV54_00325 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PUV54_07105 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PUV54_15360 sigma 54-interacting transcriptional regulator K03974 pspF; psp operon transcriptional activator
D PUV54_15340 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D PUV54_15800 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D PUV54_00490 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PUV54_12225 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PUV54_11835 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PUV54_10490 hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hfl03021]
D PUV54_13710 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PUV54_13545 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PUV54_13555 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PUV54_11225 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PUV54_12450 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PUV54_02160 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PUV54_13980 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PUV54_04845 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D PUV54_01015 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PUV54_05530 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PUV54_11840 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PUV54_13910 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PUV54_00490 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PUV54_12225 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PUV54_12360 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PUV54_06065 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hfl03019]
D PUV54_12985 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PUV54_11260 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PUV54_01150 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PUV54_15735 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PUV54_15620 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PUV54_05470 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PUV54_06065 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PUV54_05950 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PUV54_05055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PUV54_12590 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PUV54_13420 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PUV54_05255 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PUV54_10805 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PUV54_06805 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:hfl03011]
D PUV54_08515 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PUV54_13620 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PUV54_10395 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PUV54_13675 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PUV54_12310 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PUV54_13570 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PUV54_13660 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PUV54_13125 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PUV54_13585 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PUV54_13705 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PUV54_13565 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PUV54_13700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PUV54_13655 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PUV54_05480 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PUV54_13635 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PUV54_12305 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PUV54_13610 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PUV54_08525 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PUV54_15935 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PUV54_13490 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PUV54_13605 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PUV54_13595 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PUV54_13650 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PUV54_13665 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PUV54_12300 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PUV54_13535 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PUV54_13485 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PUV54_13540 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PUV54_13120 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PUV54_13640 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PUV54_13685 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PUV54_13625 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PUV54_13715 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PUV54_13670 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PUV54_07285 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PUV54_07450 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PUV54_08605 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PUV54_13615 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PUV54_13600 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PUV54_13645 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PUV54_08600 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PUV54_00300 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PUV54_13630 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PUV54_13680 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PUV54_15830 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PUV54_15630 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PUV54_14195 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PUV54_09955 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PUV54_07445 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PUV54_15995 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PUV54_14825 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PUV54_00390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hfl03009]
D PUV54_11260 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PUV54_11265 era; GTPase Era K03595 era; GTPase
D PUV54_06770 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PUV54_00490 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PUV54_12225 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PUV54_05530 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PUV54_11840 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PUV54_13910 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PUV54_00545 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PUV54_08475 transcription antitermination factor NusB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PUV54_12260 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PUV54_04910 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PUV54_04770 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PUV54_06150 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PUV54_10495 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PUV54_06655 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PUV54_09570 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PUV54_11935 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PUV54_12245 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PUV54_06785 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PUV54_05325 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PUV54_06810 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PUV54_13740 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PUV54_04840 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PUV54_05625 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PUV54_11515 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D PUV54_07295 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PUV54_11145 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PUV54_12985 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PUV54_15690 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PUV54_16155 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D PUV54_12595 hflX; GTPase HflX K03665 hflX; GTPase
D PUV54_03495 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PUV54_11230 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PUV54_05505 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D PUV54_05535 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D PUV54_06780 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D PUV54_05595 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D PUV54_01020 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D PUV54_14835 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:hfl03016]
D PUV54_02765 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_14170 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_13785 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PUV54_05015 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PUV54_06185 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PUV54_13355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PUV54_15775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PUV54_15295 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PUV54_10335 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PUV54_05130 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PUV54_11795 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PUV54_08150 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PUV54_11415 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PUV54_08445 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PUV54_07465 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PUV54_07480 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PUV54_02175 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PUV54_04300 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PUV54_15535 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PUV54_05565 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PUV54_05490 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PUV54_00775 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PUV54_03495 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PUV54_02495 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PUV54_06130 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PUV54_06145 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PUV54_16140 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PUV54_02670 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PUV54_09960 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PUV54_07110 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PUV54_00995 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PUV54_15300 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PUV54_11000 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PUV54_08105 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PUV54_10185 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PUV54_10220 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PUV54_07730 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PUV54_05830 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PUV54_04895 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PUV54_12165 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PUV54_05605 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PUV54_06700 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PUV54_10355 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D PUV54_15855 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PUV54_07290 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PUV54_14865 TrmH family RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PUV54_06810 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PUV54_00255 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PUV54_05555 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PUV54_06390 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PUV54_00725 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D PUV54_00975 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PUV54_10015 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PUV54_09820 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PUV54_10750 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PUV54_10760 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PUV54_10755 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PUV54_09840 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PUV54_02685 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PUV54_16145 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PUV54_09815 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PUV54_04150 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PUV54_05630 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PUV54_06970 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PUV54_05195 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PUV54_15735 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PUV54_05470 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hfl03012]
D PUV54_05520 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PUV54_00850 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PUV54_00470 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PUV54_13825 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PUV54_13580 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PUV54_13575 fusA; elongation factor G K02355 fusA; elongation factor G
D PUV54_11115 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PUV54_13835 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D PUV54_11120 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PUV54_14830 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PUV54_14365 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PUV54_14755 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PUV54_04960 efp; elongation factor P K02356 efp; elongation factor P
D PUV54_13000 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PUV54_05310 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:hfl03110]
D PUV54_15545 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PUV54_02275 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PUV54_00910 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PUV54_06295 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PUV54_05950 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PUV54_05055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PUV54_05945 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PUV54_10430 molecular chaperone DjiA K05801 djlA; DnaJ like chaperone protein
D PUV54_05250 Hsp33 family molecular chaperone K04083 hslO; molecular chaperone Hsp33
D PUV54_07100 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PUV54_03895 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D PUV54_00310 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PUV54_05050 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D PUV54_02505 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_02905 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D PUV54_04145 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PUV54_03700 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PUV54_06265 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PUV54_00460 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D PUV54_08435 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PUV54_14125 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PUV54_00535 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PUV54_05170 trxA; thioredoxin K03671 TXN; thioredoxin
D PUV54_05825 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D PUV54_11065 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D PUV54_14465 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D PUV54_15280 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:hfl04131]
D PUV54_15385 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PUV54_04240 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PUV54_04250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PUV54_04270 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PUV54_00705 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PUV54_08030 lipid-binding SYLF domain-containing protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:hfl03032]
D PUV54_15790 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PUV54_10150 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PUV54_00900 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_01240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_02890 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_11875 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PUV54_06860 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PUV54_08530 DnaA/Hda family protein K02313 dnaA; chromosomal replication initiator protein
D PUV54_12295 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PUV54_12445 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PUV54_15095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PUV54_14690 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PUV54_08535 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PUV54_00495 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PUV54_06175 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PUV54_13945 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PUV54_06260 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PUV54_06495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PUV54_03585 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PUV54_07910 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PUV54_10590 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PUV54_15025 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PUV54_08545 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PUV54_11290 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PUV54_10640 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PUV54_15720 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hfl03036]
D PUV54_10150 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PUV54_11260 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PUV54_04240 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PUV54_00900 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_01240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_02890 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_11875 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PUV54_06860 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PUV54_08530 DnaA/Hda family protein K02313 dnaA; chromosomal replication initiator protein
D PUV54_11495 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D PUV54_13975 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D PUV54_12590 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PUV54_13265 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PUV54_03640 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D PUV54_11770 ScpA family protein K05896 scpA; segregation and condensation protein A
D PUV54_11775 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D PUV54_10565 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PUV54_07605 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PUV54_10505 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PUV54_05900 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PUV54_10500 hypothetical protein K03586 ftsL; cell division protein FtsL
D PUV54_10560 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D PUV54_10530 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D PUV54_07600 hypothetical protein K09811 ftsX; cell division transport system permease protein
D PUV54_10570 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PUV54_04265 cell division protein ZapA K09888 zapA; cell division protein ZapA
D PUV54_07320 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D PUV54_12990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PUV54_02120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PUV54_02475 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PUV54_02470 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PUV54_02465 hypothetical protein K03571 mreD; rod shape-determining protein MreD
D PUV54_02455 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PUV54_01100 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D PUV54_06155 ParA family protein K03496 parA; chromosome partitioning protein
D PUV54_01620 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PUV54_06160 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PUV54_11290 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PUV54_10640 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PUV54_06145 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PUV54_06150 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PUV54_15855 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PUV54_09870 site-specific integrase K03733 xerC; integrase/recombinase XerC
D PUV54_09975 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PUV54_00805 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PUV54_02520 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PUV54_09970 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hfl03400]
D PUV54_07955 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PUV54_13805 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PUV54_03625 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PUV54_07020 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PUV54_08715 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D PUV54_00955 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PUV54_01255 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PUV54_11045 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PUV54_06635 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PUV54_10475 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PUV54_06235 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D PUV54_08345 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PUV54_11210 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PUV54_04760 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PUV54_00985 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PUV54_08520 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PUV54_06740 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PUV54_11725 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PUV54_14410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PUV54_10590 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PUV54_07910 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PUV54_15100 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PUV54_12805 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PUV54_11590 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PUV54_11155 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PUV54_13545 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PUV54_13555 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PUV54_13710 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PUV54_11225 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PUV54_14100 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PUV54_04320 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PUV54_05000 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PUV54_09695 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PUV54_09540 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PUV54_14690 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PUV54_08535 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PUV54_00495 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PUV54_06175 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PUV54_13945 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PUV54_06260 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PUV54_06495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PUV54_15095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PUV54_10145 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D PUV54_10325 recA; recombinase RecA K03553 recA; recombination protein RecA
D PUV54_04210 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PUV54_04200 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PUV54_04215 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PUV54_06570 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PUV54_11450 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PUV54_08540 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PUV54_14675 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PUV54_11275 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PUV54_06515 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PUV54_10585 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PUV54_05175 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PUV54_05180 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PUV54_14650 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PUV54_15025 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PUV54_08545 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PUV54_15720 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PUV54_00900 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_01240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_02890 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PUV54_11875 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PUV54_06860 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PUV54_11350 type VI secretion protein ImpB K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PUV54_14050 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PUV54_14210 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PUV54_14160 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PUV54_01545 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PUV54_16050 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PUV54_02335 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PUV54_08755 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PUV54_04535 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:hfl03029]
D PUV54_14855 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PUV54_05520 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PUV54_00850 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PUV54_13825 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PUV54_13580 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PUV54_13575 fusA; elongation factor G K02355 fusA; elongation factor G
D PUV54_11855 ubiquinol-cytochrome C chaperone family protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D PUV54_00305 helicase-related protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D PUV54_11265 era; GTPase Era K03595 era; GTPase
D PUV54_02175 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PUV54_06185 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PUV54_15295 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PUV54_15775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PUV54_15675 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PUV54_15660 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PUV54_15680 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PUV54_15095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PUV54_13860 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PUV54_05950 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PUV54_07100 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PUV54_05055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PUV54_05050 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D PUV54_05945 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PUV54_00775 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PUV54_14465 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D PUV54_02520 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PUV54_07775 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PUV54_07785 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PUV54_13080 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PUV54_09965 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PUV54_07810 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D PUV54_07870 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hfl02000]
D PUV54_09745 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PUV54_11690 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PUV54_00355 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PUV54_04705 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_09330 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_09335 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_04555 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PUV54_09445 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PUV54_08770 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D PUV54_00880 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PUV54_00885 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D PUV54_00890 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PUV54_03775 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PUV54_03785 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PUV54_03780 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PUV54_02325 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PUV54_02400 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PUV54_02410 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PUV54_12285 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PUV54_02405 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PUV54_12280 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PUV54_02395 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D PUV54_10415 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PUV54_13225 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PUV54_15135 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PUV54_14880 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PUV54_14885 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PUV54_14890 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PUV54_01710 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PUV54_01715 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PUV54_01720 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PUV54_04360 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PUV54_04365 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PUV54_04370 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PUV54_04630 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PUV54_00520 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D PUV54_06685 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D PUV54_00525 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PUV54_06690 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PUV54_01010 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PUV54_07975 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D PUV54_07980 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D PUV54_13790 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D PUV54_13795 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PUV54_12965 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D PUV54_12960 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PUV54_12955 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PUV54_07600 hypothetical protein K09811 ftsX; cell division transport system permease protein
D PUV54_07605 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PUV54_05245 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PUV54_05960 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PUV54_07045 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PUV54_05965 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PUV54_07040 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PUV54_07055 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PUV54_00745 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PUV54_08120 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PUV54_04875 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D PUV54_08135 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PUV54_02430 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PUV54_06010 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PUV54_00835 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PUV54_07300 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PUV54_11100 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PUV54_02125 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D PUV54_02130 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PUV54_01025 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PUV54_02375 ion transporter K08714 VGSC; voltage-gated sodium channel
D PUV54_05905 hypothetical protein K03320 amt; ammonium transporter, Amt family
D PUV54_12845 ammonium transporter K03320 amt; ammonium transporter, Amt family
D PUV54_02680 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_03295 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_03690 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_06095 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_06760 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_08190 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_09485 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_09765 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_11930 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PUV54_05990 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PUV54_07060 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PUV54_04990 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D PUV54_14585 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D PUV54_04795 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D PUV54_01140 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D PUV54_16430 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PUV54_07840 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PUV54_16360 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PUV54_03450 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PUV54_03455 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PUV54_03440 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D PUV54_03445 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D PUV54_04180 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D PUV54_04175 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D PUV54_14590 zinc transporter ZntB K16074 zntB; zinc transporter
D PUV54_13735 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D PUV54_01890 hypothetical protein K08363 merT; mercuric ion transport protein
D PUV54_00830 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PUV54_15185 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PUV54_04340 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PUV54_12105 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D PUV54_02150 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D PUV54_04355 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D PUV54_03220 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PUV54_00610 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_01380 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_01705 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_01790 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_01795 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_02055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_03960 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_09060 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_09190 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_09310 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_14730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_15760 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_16125 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PUV54_01930 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D PUV54_01665 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_11400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_04710 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D PUV54_09440 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PUV54_02225 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PUV54_13860 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PUV54_10580 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D PUV54_13135 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA
D PUV54_01005 LptA/OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D PUV54_01000 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D PUV54_06180 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D PUV54_05590 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein
D PUV54_14905 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PUV54_14910 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D PUV54_01920 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D PUV54_01960 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D PUV54_02750 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump
D PUV54_13040 SMR family transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PUV54_04475 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D PUV54_01430 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PUV54_00485 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D PUV54_11610 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D PUV54_08910 sodium/proline symporter K11928 putP; sodium/proline symporter
D PUV54_09900 sodium/proline symporter K11928 putP; sodium/proline symporter
D PUV54_07310 cation acetate symporter K14393 actP; cation/acetate symporter
D PUV54_03205 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D PUV54_00260 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D PUV54_15265 cation:proton antiporter K03316 nhaP; Na+:H+ antiporter
D PUV54_02820 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PUV54_12025 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D PUV54_08000 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PUV54_12580 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D PUV54_12575 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PUV54_02595 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PUV54_16055 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D PUV54_07325 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D PUV54_03370 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PUV54_03375 DUF4040 domain-containing protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PUV54_03345 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PUV54_03360 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PUV54_03390 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PUV54_03385 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PUV54_03380 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PUV54_04305 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PUV54_08455 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D PUV54_00295 VUT family protein K09125 yhhQ; queuosine precursor transporter
D PUV54_10370 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D PUV54_14010 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D PUV54_05065 MarC family protein K05595 marC; multiple antibiotic resistance protein
D PUV54_10530 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D PUV54_03435 energy transducer TonB K03832 tonB; periplasmic protein TonB
D PUV54_10965 energy transducer TonB K03832 tonB; periplasmic protein TonB
D PUV54_04160 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D PUV54_04165 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D PUV54_05755 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D PUV54_04550 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PUV54_01925 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D PUV54_01965 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PUV54_04700 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D PUV54_09340 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D PUV54_02120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PUV54_02745 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D PUV54_09450 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PUV54_02235 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PUV54_02740 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PUV54_02230 Wzz/FepE/Etk N-terminal domain-containing protein K25590 epsF; protein tyrosine kinase modulator
D PUV54_02735 hypothetical protein K25590 epsF; protein tyrosine kinase modulator
D PUV54_06825 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D PUV54_15940 entericidin A/B family lipoprotein K16348 ecnB; entericidin B
D PUV54_15285 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PUV54_02050 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:hfl02044]
D PUV54_01665 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_11400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_04555 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PUV54_04550 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PUV54_04705 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_09330 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_09335 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PUV54_04700 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D PUV54_09340 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D PUV54_04710 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D PUV54_02245 XrtA-associated ATPase K02450 gspA; general secretion pathway protein A
D PUV54_14975 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D PUV54_14970 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D PUV54_14965 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PUV54_14960 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D PUV54_14955 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D PUV54_14950 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D PUV54_14945 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D PUV54_14940 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D PUV54_14935 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D PUV54_14930 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D PUV54_14925 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D PUV54_14920 gspN; type II secretion system protein N K02463 gspN; general secretion pathway protein N
D PUV54_14990 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PUV54_08280 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PUV54_08285 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PUV54_08290 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D PUV54_08295 CpaD family pilus assembly protein K02281 cpaD; pilus assembly protein CpaD
D PUV54_08300 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE
D PUV54_08305 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PUV54_08310 type II secretion system F family protein K12510 tadB; tight adherence protein B
D PUV54_08315 type II secretion system F family protein K12511 tadC; tight adherence protein C
D PUV54_08045 TadG family pilus assembly protein K27080 tadG; tight adherence protein G
D PUV54_08275 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PUV54_11050 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PUV54_10905 YggT family protein K02221 yggT; YggT family protein
D PUV54_14165 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D PUV54_16530 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PUV54_16540 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PUV54_16410 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D PUV54_16505 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PUV54_16400 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PUV54_02210 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PUV54_16395 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PUV54_16525 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PUV54_16535 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PUV54_01500 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PUV54_01490 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PUV54_01485 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PUV54_01480 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PUV54_01475 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PUV54_01460 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PUV54_01455 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PUV54_01450 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D PUV54_01470 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PUV54_01465 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PUV54_11035 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PUV54_06265 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PUV54_02615 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PUV54_13905 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PUV54_02610 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PUV54_13445 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PUV54_13690 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PUV54_07165 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PUV54_06705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PUV54_02620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PUV54_09965 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PUV54_11780 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PUV54_11785 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PUV54_11790 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hfl02042]
D PUV54_00830 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PUV54_15185 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hfl02022]
D PUV54_05225 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PUV54_05235 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PUV54_11560 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PUV54_11565 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PUV54_02135 ATP-binding protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PUV54_02140 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D PUV54_02900 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D PUV54_08690 ATP-binding protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PUV54_09520 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D PUV54_15415 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D PUV54_12565 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PUV54_12570 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PUV54_14425 ATP-binding protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D PUV54_01045 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PUV54_02845 histidine kinase dimerization/phospho-acceptor domain-containing protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D PUV54_14200 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D PUV54_14205 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D PUV54_06255 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PUV54_10480 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PUV54_03930 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D PUV54_02450 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D PUV54_07865 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PUV54_07860 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D PUV54_09300 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
C 02035 Bacterial motility proteins [BR:hfl02035]
D PUV54_01045 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PUV54_16505 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PUV54_02210 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PUV54_16395 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PUV54_16525 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PUV54_16535 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PUV54_16530 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PUV54_16540 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PUV54_16390 FliG C-terminal domain-containing protein K02410 fliG; flagellar motor switch protein FliG
D PUV54_16400 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PUV54_16410 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D PUV54_16380 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PUV54_16450 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PUV54_16455 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PUV54_16460 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D PUV54_16520 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PUV54_16510 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB
D PUV54_16515 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PUV54_16465 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PUV54_16440 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D PUV54_16445 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PUV54_16475 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D PUV54_16365 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D PUV54_16370 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PUV54_16375 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D PUV54_16485 flagellin K02406 fliC; flagellin
D PUV54_16430 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PUV54_07840 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PUV54_16360 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PUV54_06695 flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D PUV54_16495 flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D PUV54_14990 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PUV54_08275 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PUV54_11050 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PUV54_08280 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PUV54_08285 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PUV54_08290 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D PUV54_08295 CpaD family pilus assembly protein K02281 cpaD; pilus assembly protein CpaD
D PUV54_08300 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE
D PUV54_08305 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hfl04812]
D PUV54_02475 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PUV54_10570 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PUV54_10565 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PUV54_01100 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D PUV54_06155 ParA family protein K03496 parA; chromosome partitioning protein
D PUV54_01620 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PUV54_06160 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hfl04147]
D PUV54_04240 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PUV54_15620 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PUV54_04250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PUV54_04245 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PUV54_00705 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PUV54_07380 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PUV54_09455 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PUV54_05055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PUV54_05950 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PUV54_08425 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PUV54_07065 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PUV54_12255 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PUV54_13580 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PUV54_15535 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PUV54_00550 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PUV54_03845 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_05085 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_13275 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_15400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PUV54_06355 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D PUV54_10985 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PUV54_13695 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PUV54_15145 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PUV54_07635 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PUV54_06935 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PUV54_09985 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PUV54_16135 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PUV54_10690 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PUV54_00280 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PUV54_10710 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PUV54_02145 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PUV54_04080 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PUV54_10940 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PUV54_04400 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_10610 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_14255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PUV54_07675 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D PUV54_14120 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PUV54_04270 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PUV54_03600 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:hfl02048]
D PUV54_09890 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PUV54_09880 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PUV54_09875 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PUV54_03590 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D PUV54_10150 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PUV54_01845 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PUV54_15340 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D PUV54_15345 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D PUV54_10570 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PUV54_02475 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PUV54_11290 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PUV54_10640 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PUV54_02765 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_14170 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PUV54_14110 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D PUV54_00775 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hfl04090]
D PUV54_06355 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:hfl01504]
D PUV54_12115 GNAT family N-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D PUV54_00835 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PUV54_12375 hypothetical protein K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D PUV54_14695 CatB-related O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D PUV54_13370 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D PUV54_02110 peptidoglycan DD-metalloendopeptidase family protein K02172 blaR1; bla regulator protein blaR1
D PUV54_13375 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PUV54_02105 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PUV54_02120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PUV54_09440 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PUV54_01665 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PUV54_11400 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hfl00537]
D PUV54_07380 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PUV54_09455 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hfl03100]
D PUV54_00400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PUV54_08555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PUV54_00345 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PUV54_02095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PUV54_03465 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PUV54_12130 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PUV54_06375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PUV54_00235 tRNA-Met K14230 tRNA-Met; tRNA Met
D PUV54_11900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PUV54_08610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PUV54_11485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PUV54_14805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PUV54_13895 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PUV54_11940 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PUV54_00390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PUV54_05210 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PUV54_12125 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PUV54_10865 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PUV54_09070 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D PUV54_04730 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PUV54_06090 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PUV54_10880 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PUV54_04735 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PUV54_10870 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PUV54_10875 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PUV54_08360 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PUV54_06120 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PUV54_13315 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PUV54_15880 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PUV54_10740 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PUV54_15745 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PUV54_04785 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PUV54_12200 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PUV54_02185 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PUV54_08225 carboxymuconolactone decarboxylase family protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D PUV54_08230 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D PUV54_08165 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PUV54_14060 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D PUV54_13180 hpnE; hydroxysqualene dehydroxylase HpnE K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D PUV54_06220 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PUV54_07330 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PUV54_11395 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PUV54_13800 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PUV54_00990 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D PUV54_05585 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PUV54_10055 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PUV54_15615 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D PUV54_05795 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D PUV54_02315 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PUV54_12085 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D PUV54_08790 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D PUV54_13175 squalene/phytoene synthase family protein K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103]
D PUV54_11540 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PUV54_06040 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PUV54_02590 hypothetical protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PUV54_02885 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PUV54_06425 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PUV54_05560 hypothetical protein K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D PUV54_06915 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D PUV54_08970 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D PUV54_04185 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PUV54_04425 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PUV54_10075 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PUV54_14800 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PUV54_13940 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PUV54_02485 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PUV54_03405 serine hydrolase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PUV54_05855 serine hydrolase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PUV54_16090 serine hydrolase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PUV54_10445 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PUV54_10365 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D PUV54_06530 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PUV54_14295 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D PUV54_11070 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PUV54_00755 Rid family hydrolase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PUV54_10785 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PUV54_00935 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PUV54_13170 hpnC; squalene synthase HpnC K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D PUV54_13020 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D PUV54_08835 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PUV54_09835 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PUV54_15010 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PUV54_15015 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PUV54_03875 class I adenylate-forming enzyme family protein K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D PUV54_01910 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PUV54_12750 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D PUV54_15460 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D PUV54_05200 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D PUV54_00320 ferredoxin family protein K05524 fdxA; ferredoxin
D PUV54_07680 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D PUV54_05640 dodecin family protein K09165 K09165; dodecin
D PUV54_07655 dodecin family protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D PUV54_11910 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PUV54_06210 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D PUV54_06990 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D PUV54_06850 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D PUV54_13010 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D PUV54_04235 Coq4 family protein K18586 COQ4; ubiquinone biosynthesis protein COQ4
D PUV54_15930 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D PUV54_12535 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D PUV54_01860 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PUV54_01865 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PUV54_08560 cold-shock protein K03704 cspA; cold shock protein
D PUV54_12230 cold-shock protein K03704 cspA; cold shock protein
D PUV54_14350 cold-shock protein K03704 cspA; cold shock protein
D PUV54_14395 cold-shock protein K03704 cspA; cold shock protein
D PUV54_12840 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
C 99975 Protein processing
D PUV54_15550 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PUV54_00920 tig; trigger factor K03545 tig; trigger factor
D PUV54_11200 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D PUV54_06000 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D PUV54_10885 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D PUV54_06410 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D PUV54_03830 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PUV54_12735 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PUV54_02570 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D PUV54_06660 YraN family protein K07460 yraN; putative endonuclease
D PUV54_08745 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D PUV54_12655 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D PUV54_15715 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D PUV54_13725 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PUV54_01660 IS3 family transposase K07497 K07497; putative transposase
D PUV54_01805 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PUV54_15350 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D PUV54_06500 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PUV54_10175 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PUV54_04855 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D PUV54_01355 citrate:proton symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D PUV54_09265 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D PUV54_04380 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PUV54_02445 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PUV54_14495 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PUV54_04525 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PUV54_07190 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PUV54_09980 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PUV54_10095 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PUV54_12195 nucleoside transporter C-terminal domain-containing protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D PUV54_06710 septation protein IspZ K06190 ispZ; intracellular septation protein
D PUV54_07550 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI
D PUV54_06790 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PUV54_00715 TfoX/Sxy family protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D PUV54_13160 universal stress protein K06149 uspA; universal stress protein A
D PUV54_12440 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D PUV54_00440 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PUV54_05600 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PUV54_08095 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D PUV54_10465 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PUV54_10420 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PUV54_10305 AsmA family protein K07289 asmA; AsmA protein
D PUV54_07705 NfeD family protein K07340 ybbJ; inner membrane protein
D PUV54_05970 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D PUV54_08240 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D PUV54_07360 creD; cell envelope integrity protein CreD K06143 creD; inner membrane protein
D PUV54_12950 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PUV54_15275 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D PUV54_05230 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D PUV54_09710 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D PUV54_10745 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D PUV54_08005 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D PUV54_02015 copper resistance protein B K07233 pcoB; copper resistance protein B
D PUV54_13515 copper resistance protein B K07233 pcoB; copper resistance protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PUV54_11445 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D PUV54_10255 MBL fold metallo-hydrolase K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D PUV54_12205 tRNA-binding protein K06878 K06878; tRNA-binding protein
D PUV54_15050 group III truncated hemoglobin K06886 glbN; hemoglobin
D PUV54_00415 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PUV54_06250 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PUV54_07895 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PUV54_11080 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PUV54_14720 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PUV54_06560 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D PUV54_11920 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PUV54_00765 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PUV54_00740 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PUV54_06270 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D PUV54_03325 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D PUV54_14775 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D PUV54_00640 VOC family protein K04750 phnB; PhnB protein
D PUV54_11630 VOC family protein K04750 phnB; PhnB protein
D PUV54_16245 LemA family protein K03744 lemA; LemA protein
D PUV54_08740 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
C 99997 Function unknown
D PUV54_07960 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D PUV54_11885 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D PUV54_16315 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D PUV54_08470 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D PUV54_03080 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D PUV54_16045 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein
D PUV54_09625 VOC family protein K06991 K06991; uncharacterized protein
D PUV54_16205 C39 family peptidase K06992 K06992; uncharacterized protein
D PUV54_06200 VOC family protein K06996 K06996; uncharacterized protein
D PUV54_13230 MMPL family transporter K07003 K07003; uncharacterized protein
D PUV54_08995 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D PUV54_07825 alpha/beta hydrolase-fold protein K07017 K07017; uncharacterized protein
D PUV54_11720 alpha/beta hydrolase-fold protein K07017 K07017; uncharacterized protein
D PUV54_00785 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D PUV54_07995 zinc metallopeptidase K07054 K07054; uncharacterized protein
D PUV54_13530 permease K07089 K07089; uncharacterized protein
D PUV54_10110 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PUV54_12640 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PUV54_14300 PhoX family phosphatase K07093 K07093; uncharacterized protein
D PUV54_09460 metallophosphoesterase K07098 K07098; uncharacterized protein
D PUV54_07245 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D PUV54_05680 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D PUV54_01825 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D PUV54_15640 hypothetical protein K07126 K07126; uncharacterized protein
D PUV54_08850 MAPEG family protein K07136 K07136; uncharacterized protein
D PUV54_09475 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D PUV54_14600 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D PUV54_05820 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D PUV54_05150 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D PUV54_12415 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D PUV54_10910 DUF167 family protein K09131 K09131; uncharacterized protein
D PUV54_03030 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D PUV54_05445 cupin domain-containing protein K09705 K09705; uncharacterized protein
D PUV54_09990 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D PUV54_08085 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D PUV54_05815 Trm112 family protein K09791 K09791; uncharacterized protein
D PUV54_06800 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D PUV54_06430 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D PUV54_11175 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D PUV54_03510 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D PUV54_14740 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D PUV54_15525 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D PUV54_12390 crosslink repair DNA glycosylase YcaQ family protein K09927 K09927; uncharacterized protein
D PUV54_03530 TIGR04282 family arsenosugar biosynthesis glycosyltransferase K09931 K09931; uncharacterized protein
D PUV54_11160 YegP family protein K09946 K09946; uncharacterized protein
D PUV54_05315 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D PUV54_09000 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D PUV54_08550 TraB/GumN family protein K09973 K09973; uncharacterized protein
D PUV54_07720 DUF1287 domain-containing protein K09974 K09974; uncharacterized protein
D PUV54_01055 YdbL family protein K09978 K09978; uncharacterized protein
D PUV54_04940 YjhX family toxin K09982 K09982; uncharacterized protein
D PUV54_11010 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D PUV54_02565 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein
D PUV54_10795 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D PUV54_15885 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D PUV54_14635 VWA domain-containing protein K09989 K09989; uncharacterized protein
D PUV54_14415 2OG-Fe(II) oxygenase K09990 K09990; uncharacterized protein
D PUV54_10695 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein
D PUV54_05525 RNA-binding protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 29, 2024