+D GENES KO #

  KEGG Orthology (KO) - Hydrogenobaculum sp. HO

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:hho00010] D HydHO_1402 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HydHO_0167 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D HydHO_0599 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HydHO_0183 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D HydHO_1566 putative phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D HydHO_1340 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HydHO_0461 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HydHO_1492 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HydHO_1243 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HydHO_0568 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HydHO_1563 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1417 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0083 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0525 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_1418 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_0090 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00020 Citrate cycle (TCA cycle) [PATH:hho00020] D HydHO_0598 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HydHO_1413 Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1417 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0083 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0525 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_1418 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_0919 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HydHO_0920 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HydHO_0483 fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HydHO_0597 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HydHO_0776 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D HydHO_0620 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:hho00030] D HydHO_0167 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D HydHO_1270 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HydHO_1271 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D HydHO_1269 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D HydHO_0880 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HydHO_1300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HydHO_0810 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HydHO_0352 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HydHO_0020 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HydHO_0599 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HydHO_0183 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D HydHO_1566 putative phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] C 00040 Pentose and glucuronate interconversions [PATH:hho00040] D HydHO_0489 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HydHO_0603 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HydHO_0880 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HydHO_1032 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:hho00051] D HydHO_0167 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D HydHO_0828 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HydHO_1547 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HydHO_1113 hypothetical protein K18447 NUDX14; ADP-sugar diphosphatase [EC:3.6.1.21] D HydHO_1032 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HydHO_0599 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HydHO_0183 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D HydHO_1566 putative phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D HydHO_1340 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HydHO_0352 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:hho00052] D HydHO_0351 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HydHO_0603 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HydHO_1402 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism [PATH:hho00053] D HydHO_0489 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HydHO_1438 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:hho00500] D HydHO_0603 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HydHO_1113 hypothetical protein K18447 NUDX14; ADP-sugar diphosphatase [EC:3.6.1.21] D HydHO_0004 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D HydHO_0604 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HydHO_1060 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D HydHO_0797 alpha-amylase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D HydHO_1402 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HydHO_0167 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hho00520] D HydHO_0804 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HydHO_0029 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HydHO_1607 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HydHO_0144 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HydHO_0627 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D HydHO_1402 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HydHO_0603 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HydHO_0489 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HydHO_0351 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HydHO_1438 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D HydHO_0167 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D HydHO_0828 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HydHO_1547 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HydHO_1365 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:hho00620] D HydHO_0090 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1417 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0083 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0525 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_1418 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_0568 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HydHO_1021 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HydHO_0337 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HydHO_1360 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HydHO_0824 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HydHO_0168 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D HydHO_0832 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D HydHO_0468 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HydHO_0776 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D HydHO_0620 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D HydHO_0597 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HydHO_0483 fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HydHO_1563 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HydHO_1183 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D HydHO_1203 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hho00630] D HydHO_0090 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HydHO_0597 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HydHO_0598 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HydHO_0514 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D HydHO_1162 Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D HydHO_1350 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HydHO_0137 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HydHO_0488 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1346 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D HydHO_1068 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D HydHO_1071 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:hho00640] D HydHO_0090 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1021 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HydHO_0337 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HydHO_1360 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HydHO_0824 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HydHO_0035 aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HydHO_0920 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HydHO_0919 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:hho00650] D HydHO_0035 aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1417 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0083 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0525 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_1418 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_1202 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HydHO_1201 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:hho00660] D HydHO_1202 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HydHO_1201 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HydHO_0920 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HydHO_0919 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HydHO_0508 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HydHO_0434 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HydHO_1250 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:hho00562] D HydHO_1031 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D HydHO_0680 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HydHO_1340 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:hho00190] D HydHO_0742 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HydHO_0752 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HydHO_0743 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HydHO_0744 NADH dehydrogenase subunit D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D HydHO_0753 NADH dehydrogenase subunit D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D HydHO_0216 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D HydHO_0217 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D HydHO_0414 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D HydHO_0745 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HydHO_0754 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HydHO_0746 NADH dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HydHO_0755 NADH dehydrogenase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HydHO_0747 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D HydHO_0756 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D HydHO_0748 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HydHO_0757 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HydHO_0749 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HydHO_0758 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HydHO_1096 NADH/Ubiquinone/plastoquinone (complex I) K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HydHO_0750 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D HydHO_0759 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D HydHO_0751 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D HydHO_0760 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D HydHO_1501 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D HydHO_1502 Cytochrome b/b6 domain containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HydHO_1503 ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D HydHO_0818 Cytochrome-c oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D HydHO_0817 cytochrome C oxidase mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D HydHO_0458 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HydHO_0459 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HydHO_0319 cytochrome c class I K08738 CYC; cytochrome c D HydHO_1158 cytochrome c class I K08738 CYC; cytochrome c D HydHO_1009 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HydHO_1016 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HydHO_1521 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HydHO_1010 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HydHO_1082 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HydHO_0873 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HydHO_1012 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HydHO_1011 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HydHO_0875 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HydHO_1357 kdpB; ATPase, P-type (transporting), HAD superfamily, subfamily IC, KdpB K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D HydHO_0170 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:hho00720] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1563 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HydHO_0776 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D HydHO_0620 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D HydHO_0597 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HydHO_0483 fumarase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HydHO_0624 succinate dehydrogenase subunit A K18556 frdA; NADH-dependent fumarate reductase subunit A [EC:1.3.1.6] D HydHO_0304 succinate dehydrogenase and fumarate reductase iron-sulfur protein K18557 frdB; NADH-dependent fumarate reductase subunit B [EC:1.3.1.6] D HydHO_1564 molybdopterin dinucleotide-binding region K18558 frdC; NADH-dependent fumarate reductase subunit C D HydHO_0552 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K18559 frdD; NADH-dependent fumarate reductase subunit D D HydHO_1453 4Fe-4S ferredoxin iron-sulfur binding domain protein K18560 frdE; NADH-dependent fumarate reductase subunit E D HydHO_0919 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HydHO_0920 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HydHO_1417 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0083 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HydHO_0525 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_1418 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HydHO_1413 Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HydHO_0598 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HydHO_1257 Succinate--CoA ligase (ADP-forming) K15232 ccsA; citryl-CoA synthetase large subunit [EC:6.2.1.18] D HydHO_1256 CoA-binding domain protein K15233 ccsB; citryl-CoA synthetase small subunit D HydHO_1362 Citrate synthase K15234 ccl; citryl-CoA lyase [EC:4.1.3.34] D HydHO_1021 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HydHO_0337 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HydHO_1360 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HydHO_0824 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HydHO_0889 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HydHO_1511 5,10-methylenetetrahydrofolate reductase (NAD(P)) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D HydHO_0090 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:hho00680] D HydHO_0488 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HydHO_1243 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HydHO_0597 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HydHO_0599 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HydHO_0183 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D HydHO_1566 putative phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D HydHO_1075 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HydHO_1072 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HydHO_1076 heterodisulfide reductase, subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HydHO_1073 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HydHO_1077 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HydHO_0090 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1563 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HydHO_1492 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HydHO_0783 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HydHO_0962 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D HydHO_1594 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:hho00910] D HydHO_0092 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D HydHO_0137 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HydHO_1206 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HydHO_1064 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:hho00920] D HydHO_1562 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D HydHO_0131 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D HydHO_1486 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D HydHO_0591 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D HydHO_1309 TQO small subunit DoxD domain-containing protein K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2] D HydHO_0912 molybdopterin dinucleotide-binding region K08357 ttrA; tetrathionate reductase subunit A D HydHO_0910 Fe-S-cluster-containing hydrogenase subunit K08358 ttrB; tetrathionate reductase subunit B D HydHO_0911 Polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:hho00061] D HydHO_1021 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HydHO_0337 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HydHO_1360 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HydHO_0824 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HydHO_0499 acyl carrier protein K02078 acpP; acyl carrier protein D HydHO_0736 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HydHO_0235 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HydHO_0500 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HydHO_0498 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HydHO_0927 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HydHO_1565 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HydHO_0782 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D HydHO_0782 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:hho00561] D HydHO_0234 phosphate:acyl-(acyl carrier protein) acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HydHO_1187 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HydHO_0423 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:hho00564] D HydHO_1153 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HydHO_0893 Fe-S oxidoreductase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D HydHO_1187 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HydHO_0423 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HydHO_1119 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D HydHO_1573 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D HydHO_1165 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D HydHO_0172 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D HydHO_0802 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:hho00230] D HydHO_1113 hypothetical protein K18447 NUDX14; ADP-sugar diphosphatase [EC:3.6.1.21] D HydHO_0020 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HydHO_1574 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HydHO_1189 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HydHO_1249 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HydHO_0097 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D HydHO_1246 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D HydHO_0546 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D HydHO_0547 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HydHO_0388 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HydHO_1018 Phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D HydHO_1088 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HydHO_1097 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HydHO_1427 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HydHO_0091 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HydHO_0323 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HydHO_0248 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D HydHO_0196 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HydHO_0964 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HydHO_0840 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HydHO_0634 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HydHO_0761 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HydHO_1297 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HydHO_1216 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HydHO_0859 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D HydHO_1344 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HydHO_0238 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HydHO_1092 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HydHO_1443 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D HydHO_0285 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HydHO_0739 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] C 00240 Pyrimidine metabolism [PATH:hho00240] D HydHO_0542 Carbamoyl-phosphate synthase L chain ATP-binding protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HydHO_1106 Carbamoyl-phosphate synthase L chain ATP-binding protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HydHO_0946 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HydHO_0321 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HydHO_0811 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D HydHO_1233 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D HydHO_1526 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D HydHO_0435 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HydHO_0415 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HydHO_1263 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HydHO_0964 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HydHO_1515 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D HydHO_1477 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D HydHO_1443 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D HydHO_0549 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D HydHO_1297 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HydHO_1216 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HydHO_0134 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D HydHO_0149 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HydHO_0497 thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:hho00250] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_0585 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HydHO_1577 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HydHO_0474 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HydHO_0163 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HydHO_1092 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HydHO_1427 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HydHO_0321 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HydHO_0035 aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HydHO_1206 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HydHO_1064 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HydHO_0137 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HydHO_0542 Carbamoyl-phosphate synthase L chain ATP-binding protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HydHO_1106 Carbamoyl-phosphate synthase L chain ATP-binding protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HydHO_0946 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HydHO_0547 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HydHO_0804 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HydHO_1574 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:hho00260] D HydHO_0784 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HydHO_0391 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HydHO_1394 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HydHO_0588 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D HydHO_0324 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HydHO_0615 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HydHO_0488 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HydHO_1492 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HydHO_0783 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HydHO_0962 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D HydHO_1594 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1346 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D HydHO_1068 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D HydHO_1071 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D HydHO_1239 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HydHO_0119 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:hho00270] D HydHO_1472 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D HydHO_0166 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HydHO_0741 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HydHO_0080 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D HydHO_0882 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D HydHO_0323 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HydHO_0537 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D HydHO_0140 purine or other phosphorylase family 1 K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D HydHO_0587 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D HydHO_1483 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D HydHO_0036 2,3-diketo-5-methylthio-1-phosphopentanephosphat ase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D HydHO_1481 acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D HydHO_1482 acireductone dioxygenase apoprotein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D HydHO_0513 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HydHO_0784 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HydHO_0391 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HydHO_1394 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HydHO_0379 NIL domain containing protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D HydHO_1349 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_0597 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HydHO_0231 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D HydHO_0783 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:hho00280] D HydHO_1349 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1319 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D HydHO_0035 aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hho00290] D HydHO_0508 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HydHO_0434 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HydHO_1250 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D HydHO_1202 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HydHO_1201 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HydHO_0066 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HydHO_0218 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HydHO_1349 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HydHO_1183 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D HydHO_1203 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:hho00300] D HydHO_1394 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HydHO_0784 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HydHO_0391 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HydHO_0340 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HydHO_0070 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HydHO_1354 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HydHO_1160 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HydHO_0476 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HydHO_0511 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HydHO_1454 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HydHO_1345 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:hho00310] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_0035 aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HydHO_0099 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:hho00220] D HydHO_0996 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D HydHO_0474 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HydHO_0163 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HydHO_0547 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HydHO_0137 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_1129 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D HydHO_0480 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D HydHO_0327 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D HydHO_0999 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D HydHO_1354 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:hho00330] D HydHO_1479 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D HydHO_0882 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D HydHO_0080 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D HydHO_0777 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D HydHO_0452 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HydHO_0678 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:hho00340] D HydHO_0621 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D HydHO_0429 hypothetical protein K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D HydHO_0860 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D HydHO_0795 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D HydHO_1366 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D HydHO_0438 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D HydHO_0356 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D HydHO_1089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HydHO_0887 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:hho00350] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_1089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:hho00360] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_1089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hho00400] D HydHO_0183 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D HydHO_1566 putative phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D HydHO_0879 3-dehydroquinate synthase K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24] D HydHO_0221 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D HydHO_1184 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D HydHO_1034 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D HydHO_0977 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HydHO_0222 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D HydHO_0543 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HydHO_1448 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HydHO_0150 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D HydHO_1248 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D HydHO_1197 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D HydHO_1239 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HydHO_0119 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HydHO_0127 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D HydHO_1597 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_1089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:hho00410] D HydHO_0771 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D HydHO_0035 aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HydHO_0825 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:hho00450] D HydHO_1472 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D HydHO_0611 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HydHO_1432 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HydHO_0341 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D HydHO_0488 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:hho00470] D HydHO_1003 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HydHO_0143 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HydHO_0547 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HydHO_1285 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HydHO_1485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HydHO_1160 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HydHO_0511 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:hho00480] D HydHO_0553 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HydHO_1413 Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HydHO_1269 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D HydHO_1270 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HydHO_1479 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D HydHO_0882 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:hho00540] D HydHO_1019 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HydHO_0630 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D HydHO_0202 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HydHO_1005 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HydHO_0104 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HydHO_0774 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HydHO_0171 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HydHO_1581 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HydHO_0831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HydHO_0316 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HydHO_0679 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HydHO_1352 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HydHO_0785 gmhC; PfkB domain protein GmhC K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D HydHO_1559 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D HydHO_0230 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D HydHO_1062 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hho00541] D HydHO_0603 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HydHO_0351 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HydHO_0489 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HydHO_1438 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D HydHO_1508 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HydHO_1506 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HydHO_1507 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HydHO_1505 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HydHO_0828 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HydHO_1547 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HydHO_1365 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D HydHO_0029 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HydHO_0627 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:hho00550] D HydHO_1607 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HydHO_0144 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HydHO_0579 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HydHO_1485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HydHO_1454 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HydHO_0143 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HydHO_1345 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HydHO_1242 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HydHO_0376 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HydHO_1185 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HydHO_0214 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HydHO_0437 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HydHO_0361 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HydHO_0850 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HydHO_1115 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:hho00552] D HydHO_0376 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:hho00730] D HydHO_1121 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D HydHO_0299 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D HydHO_1328 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HydHO_1056 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HydHO_1137 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D HydHO_1168 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HydHO_1512 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HydHO_0466 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D HydHO_0285 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:hho00740] D HydHO_1324 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HydHO_0494 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HydHO_0068 5-amino-6-(5-phosphoribosylamino)uracilreductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D HydHO_0538 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D HydHO_0844 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D HydHO_1262 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D HydHO_1476 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:hho00750] D HydHO_0968 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D HydHO_0635 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D HydHO_0324 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HydHO_0615 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:hho00760] D HydHO_0585 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HydHO_0019 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D HydHO_1045 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D HydHO_0410 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HydHO_1390 NH(3)-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D HydHO_0849 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D HydHO_1374 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:hho00770] D HydHO_1202 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HydHO_1201 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HydHO_0066 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HydHO_0218 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HydHO_0023 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HydHO_0825 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HydHO_0195 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D HydHO_1494 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HydHO_0305 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HydHO_0681 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HydHO_0510 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HydHO_1349 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HydHO_0771 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:hho00780] D HydHO_0925 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D HydHO_0500 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HydHO_0498 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HydHO_0927 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HydHO_1565 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HydHO_0855 putative carboxylesterase BioH (biotin synthesis protein BioH) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D HydHO_0808 6-carboxyhexanoate-CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14] D HydHO_0526 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HydHO_0484 Adenosylmethionine--8-amino-7-oxononanoatetransa minase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D HydHO_0506 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D HydHO_0992 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D HydHO_0200 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:hho00785] D HydHO_1066 Radical SAM domain protein K09711 lipS1; lipoyl synthase D HydHO_0584 Radical SAM domain protein K24689 lipS2; lipoyl synthase D HydHO_1531 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D HydHO_0926 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1346 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D HydHO_1068 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D HydHO_1071 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:hho00790] D HydHO_0022 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HydHO_0536 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D HydHO_0005 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HydHO_1571 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HydHO_1324 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HydHO_1322 Chorismate binding protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D HydHO_1323 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D HydHO_1124 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HydHO_1278 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HydHO_0792 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D HydHO_0649 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HydHO_0492 Queuosine synthesis K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HydHO_0031 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HydHO_1180 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HydHO_1519 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HydHO_0139 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HydHO_1520 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HydHO_1135 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HydHO_0076 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:hho00670] D HydHO_0889 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HydHO_0488 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HydHO_1249 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HydHO_0091 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HydHO_1475 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HydHO_0497 thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D HydHO_1511 5,10-methylenetetrahydrofolate reductase (NAD(P)) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D HydHO_0870 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:hho00860] D HydHO_0689 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D HydHO_0796 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HydHO_0533 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HydHO_1226 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D HydHO_0629 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D HydHO_1199 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D HydHO_0872 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D HydHO_1138 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D HydHO_0394 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D HydHO_1473 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D HydHO_1412 Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] D HydHO_1303 Rubrerythrin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hho00130] D HydHO_1033 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D HydHO_1260 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D HydHO_1476 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HydHO_1339 Methyltransferase type 11 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HydHO_0151 putative periplasmic solute-binding protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D HydHO_0805 Radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D HydHO_1388 de-hypoxanthine futalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D HydHO_1163 putative periplasmic solute-binding protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:hho00900] D HydHO_1056 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HydHO_0096 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HydHO_1276 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D HydHO_1395 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HydHO_1156 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D HydHO_1218 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HydHO_1043 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D HydHO_1476 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HydHO_1232 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HydHO_0907 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HydHO_1242 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HydHO_1300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:hho00523] D HydHO_1508 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HydHO_1506 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HydHO_1507 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HydHO_1505 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D HydHO_1506 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:hho00332] D HydHO_0452 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HydHO_0678 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:hho00261] D HydHO_0784 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HydHO_0391 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HydHO_0340 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HydHO_0070 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:hho00521] D HydHO_1402 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D HydHO_0680 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HydHO_1031 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D HydHO_1508 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HydHO_1506 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HydHO_1507 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HydHO_1505 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HydHO_1402 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:hho00525] D HydHO_1508 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HydHO_1506 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:hho00401] D HydHO_1597 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_1089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D HydHO_0543 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HydHO_1448 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D HydHO_0736 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HydHO_0498 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HydHO_1565 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HydHO_0499 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:hho00999] D HydHO_0166 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HydHO_0741 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HydHO_1184 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation [PATH:hho00627] D HydHO_0168 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D HydHO_1476 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:hho00364] D HydHO_1198 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hho00361] D HydHO_1198 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:hho00623] D HydHO_1198 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:hho00633] D HydHO_0055 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D HydHO_1406 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D HydHO_0056 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D HydHO_1613 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_0044 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HydHO_1614 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0043 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HydHO_0042 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_1615 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HydHO_0041 2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit, ferredoxin-like protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HydHO_1054 pyruvate:ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:hho03020] D HydHO_0257 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HydHO_0258 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HydHO_0292 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:hho03010] D HydHO_0062 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D HydHO_1265 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HydHO_0270 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HydHO_0291 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HydHO_0281 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HydHO_0444 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HydHO_0260 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HydHO_0278 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HydHO_1000 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HydHO_0263 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HydHO_0290 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HydHO_0259 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HydHO_0289 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HydHO_0277 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HydHO_0147 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HydHO_0296 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HydHO_0273 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HydHO_0442 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D HydHO_0268 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HydHO_1099 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HydHO_0740 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HydHO_0254 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HydHO_0267 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HydHO_0264 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HydHO_0265 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D HydHO_0276 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HydHO_0279 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HydHO_0256 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HydHO_0441 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HydHO_0255 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D HydHO_0253 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D HydHO_1001 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D HydHO_0274 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D HydHO_0283 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D HydHO_0271 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HydHO_0293 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D HydHO_0280 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HydHO_1041 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HydHO_1039 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HydHO_0115 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D HydHO_0269 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HydHO_0266 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D HydHO_0275 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HydHO_0950 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D HydHO_0116 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HydHO_0072 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D HydHO_0272 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D HydHO_0282 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HydHO_0973 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D HydHO_0233 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HydHO_0250 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HydHO_0453 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HydHO_0288 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D HydHO_R0033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HydHO_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HydHO_R0030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HydHO_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HydHO_R0029 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HydHO_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:hho00970] D HydHO_R0031 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0011 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HydHO_R0049 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HydHO_R0004 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HydHO_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HydHO_R0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HydHO_R0028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HydHO_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HydHO_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HydHO_R0023 tRNA-His K14226 tRNA-His; tRNA His D HydHO_R0032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HydHO_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HydHO_R0025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HydHO_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HydHO_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D HydHO_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D HydHO_R0050 tRNA-Met K14230 tRNA-Met; tRNA Met D HydHO_R0053 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HydHO_R0002 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HydHO_R0006 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HydHO_R0007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HydHO_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HydHO_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HydHO_R0048 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HydHO_R0016 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HydHO_R0013 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HydHO_R0019 tRNA-Val K14237 tRNA-Val; tRNA Val D HydHO_R0021 tRNA-Val K14237 tRNA-Val; tRNA Val D HydHO_R0040 tRNA-Val K14237 tRNA-Val; tRNA Val D HydHO_0660 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D HydHO_1434 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HydHO_0353 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HydHO_1356 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HydHO_1504 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HydHO_0456 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HydHO_1568 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HydHO_1567 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HydHO_0505 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HydHO_0355 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HydHO_1117 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HydHO_0341 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HydHO_1475 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HydHO_1211 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HydHO_1051 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HydHO_0772 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HydHO_0991 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HydHO_0395 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HydHO_0690 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HydHO_0551 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HydHO_1038 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HydHO_0869 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HydHO_0626 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HydHO_0368 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:hho03060] D HydHO_0284 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D HydHO_0251 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HydHO_0807 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HydHO_1110 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D HydHO_0129 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D HydHO_0801 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HydHO_0877 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HydHO_0984 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HydHO_0295 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HydHO_R0018 Bacteria_small_SRP K01983 ffs; SRP RNA D HydHO_0606 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HydHO_1480 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D HydHO_0197 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D HydHO_0198 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D HydHO_1108 Sec-independent protein secretion pathway component K03117 tatB; sec-independent protein translocase protein TatB D HydHO_1107 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D HydHO_1134 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HydHO_1247 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:hho04122] D HydHO_1328 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HydHO_1080 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D HydHO_0385 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D HydHO_0346 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HydHO_0386 Queuosine synthesis K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HydHO_1520 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HydHO_1519 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HydHO_0121 MoaD family protein K03636 moaD; sulfur-carrier protein D HydHO_0659 molybdopterin converting factor, small subunit K03636 moaD; sulfur-carrier protein D HydHO_1363 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D HydHO_0139 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HydHO_1136 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:hho03018] D HydHO_1243 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HydHO_0148 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HydHO_1014 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HydHO_0298 rhlB; DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HydHO_0683 transcription termination factor Rho K03628 rho; transcription termination factor Rho D HydHO_0871 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D HydHO_1382 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HydHO_0857 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HydHO_1219 RNA chaperone Hfq K03666 hfq; host factor-I protein D HydHO_1241 RNA-binding protein Hfq K03666 hfq; host factor-I protein D HydHO_1572 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:hho03030] D HydHO_0406 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HydHO_1589 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HydHO_1318 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HydHO_0205 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HydHO_0823 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HydHO_1083 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HydHO_0135 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HydHO_1499 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HydHO_0443 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D HydHO_0650 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HydHO_1040 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HydHO_0890 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:hho03410] D HydHO_1455 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HydHO_0884 mutY; DNA-(apurinic or apyrimidinic site) lyase, MutY K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HydHO_1460 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HydHO_1320 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HydHO_0890 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:hho03420] D HydHO_1193 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HydHO_0830 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D HydHO_1236 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D HydHO_1436 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HydHO_0890 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:hho03430] D HydHO_1147 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D HydHO_1436 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HydHO_1320 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HydHO_0443 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D HydHO_1589 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HydHO_1083 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HydHO_1318 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HydHO_0823 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HydHO_0205 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HydHO_0406 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HydHO_0890 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:hho03440] D HydHO_1320 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HydHO_0443 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D HydHO_0244 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D HydHO_1355 recA protein K03553 recA; recombination protein RecA D HydHO_1253 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HydHO_1589 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HydHO_1083 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HydHO_1318 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HydHO_0823 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HydHO_0205 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HydHO_0406 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HydHO_1611 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:hho02010] D HydHO_0935 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HydHO_0943 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HydHO_0936 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D HydHO_0937 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HydHO_0185 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HydHO_0833 virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HydHO_0348 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HydHO_0187 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HydHO_1333 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HydHO_0186 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HydHO_1590 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D HydHO_1591 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D HydHO_1592 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D HydHO_1593 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HydHO_1529 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D HydHO_1530 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D HydHO_0446 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D HydHO_0447 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HydHO_0300 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HydHO_0997 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D HydHO_0157 ABC transporter domain-containing protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:hho03070] D HydHO_0561 outer membrane efflux protein K12340 tolC; outer membrane protein D HydHO_1555 type II secretion system protein D (GspD) K02453 gspD; general secretion pathway protein D D HydHO_0078 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D HydHO_1552 gpsF; Type II secretion system F domain, GpsF K02455 gspF; general secretion pathway protein F D HydHO_1554 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D HydHO_0897 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D HydHO_1549 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D HydHO_0982 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D HydHO_1495 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D HydHO_1110 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D HydHO_0129 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D HydHO_0251 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HydHO_0807 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HydHO_0284 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D HydHO_0801 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HydHO_0877 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HydHO_0984 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HydHO_0606 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HydHO_0295 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HydHO_0197 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D HydHO_0198 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D HydHO_1108 Sec-independent protein secretion pathway component K03117 tatB; sec-independent protein translocase protein TatB D HydHO_1107 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D HydHO_0550 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1 B B 09132 Signal transduction C 02020 Two-component system [PATH:hho02020] D HydHO_0799 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HydHO_1590 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D HydHO_0924 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_1159 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_1261 flagellin domain protein K02406 fliC; flagellin D HydHO_0978 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D HydHO_0622 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D HydHO_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HydHO_0138 nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D HydHO_0930 nitrogen regulatory protein P-II family K04751 glnB; nitrogen regulatory protein P-II 1 D HydHO_0137 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HydHO_0013 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HydHO_1316 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D HydHO_1152 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D HydHO_0315 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D HydHO_1205 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D HydHO_1266 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D HydHO_1406 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D HydHO_0056 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D HydHO_0055 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D HydHO_0054 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D HydHO_1332 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D HydHO_0375 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HydHO_0912 molybdopterin dinucleotide-binding region K08357 ttrA; tetrathionate reductase subunit A D HydHO_0910 Fe-S-cluster-containing hydrogenase subunit K08358 ttrB; tetrathionate reductase subunit B D HydHO_0911 Polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C D HydHO_1501 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D HydHO_1502 Cytochrome b/b6 domain containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HydHO_1503 ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D HydHO_0319 cytochrome c class I K08738 CYC; cytochrome c D HydHO_1158 cytochrome c class I K08738 CYC; cytochrome c D HydHO_0818 Cytochrome-c oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D HydHO_0817 cytochrome C oxidase mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D HydHO_0458 cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HydHO_0459 cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HydHO_0561 outer membrane efflux protein K12340 tolC; outer membrane protein D HydHO_0618 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:hho04148] D HydHO_1479 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D HydHO_1501 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:hho02024] D HydHO_1219 RNA chaperone Hfq K03666 hfq; host factor-I protein D HydHO_1241 RNA-binding protein Hfq K03666 hfq; host factor-I protein D HydHO_0543 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HydHO_1448 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HydHO_0782 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HydHO_0494 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HydHO_0007 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HydHO_1182 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HydHO_0529 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D HydHO_0471 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HydHO_1509 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HydHO_0877 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HydHO_0251 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HydHO_0807 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HydHO_0284 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D HydHO_0801 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HydHO_0984 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HydHO_0606 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HydHO_0295 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:hho02030] D HydHO_1332 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D HydHO_0375 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HydHO_0637 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HydHO_0180 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HydHO_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HydHO_0622 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D HydHO_0623 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:hho02040] D HydHO_0178 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D HydHO_0179 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D HydHO_0637 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HydHO_0639 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HydHO_0643 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D HydHO_0180 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HydHO_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HydHO_0645 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HydHO_0646 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HydHO_0647 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D HydHO_1457 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HydHO_0648 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HydHO_0158 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D HydHO_0174 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HydHO_0177 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HydHO_0641 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HydHO_0642 FlgF; flagellar hook-basal body protein, FlgF or FlgG K02390 flgE; flagellar hook protein FlgE D HydHO_1514 FlgF; flagellar hook-basal body protein, FlgF or FlgG K02391 flgF; flagellar basal-body rod protein FlgF D HydHO_0159 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D HydHO_1359 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D HydHO_0583 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D HydHO_0582 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D HydHO_0821 flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D HydHO_0820 flagellin/flagellar hook associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL D HydHO_1261 flagellin domain protein K02406 fliC; flagellin D HydHO_0866 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D HydHO_0865 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D HydHO_0622 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D HydHO_0623 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D HydHO_0618 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D HydHO_0923 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D HydHO_1498 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D HydHO_1205 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D HydHO_0978 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HydHO_1243 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:hho01501] D HydHO_0007 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HydHO_0561 outer membrane efflux protein K12340 tolC; outer membrane protein D HydHO_0437 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HydHO_0361 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HydHO_0850 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:hho01502] D HydHO_0143 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HydHO_1003 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HydHO_1345 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HydHO_1185 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HydHO_0214 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hho01503] D HydHO_0901 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HydHO_0924 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_1159 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_0561 outer membrane efflux protein K12340 tolC; outer membrane protein D HydHO_1019 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:hho01000] C 01001 Protein kinases [BR:hho01001] D HydHO_1288 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D HydHO_0799 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HydHO_0365 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HydHO_1237 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HydHO_0013 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:hho01009] D HydHO_0513 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HydHO_1057 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:hho01002] D HydHO_1247 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D HydHO_1109 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HydHO_0053 Hydrogenase 2 maturation peptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D HydHO_0634 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HydHO_1154 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC D HydHO_1574 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HydHO_1206 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HydHO_0804 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HydHO_1577 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HydHO_1052 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D HydHO_0553 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HydHO_0286 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HydHO_1204 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D HydHO_0507 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HydHO_1497 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D HydHO_0995 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D HydHO_0924 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_1159 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_1115 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HydHO_0153 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HydHO_0548 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HydHO_0812 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D HydHO_1134 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HydHO_0693 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HydHO_1196 signal peptide protein peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D HydHO_1299 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D HydHO_0677 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D HydHO_1025 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D HydHO_1342 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:hho01003] D HydHO_0698 glycosyl transferase group 1 K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D HydHO_0004 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D HydHO_0437 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:hho01005] D HydHO_1019 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HydHO_0104 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HydHO_0630 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D HydHO_0202 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HydHO_1005 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HydHO_0774 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HydHO_0679 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HydHO_1581 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HydHO_0316 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HydHO_0831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HydHO_0171 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HydHO_0785 gmhC; PfkB domain protein GmhC K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D HydHO_1559 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D HydHO_1062 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D HydHO_1352 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HydHO_0230 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D HydHO_1541 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hho01011] D HydHO_1607 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HydHO_0144 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HydHO_0579 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HydHO_1485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HydHO_1454 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HydHO_0143 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HydHO_1003 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HydHO_1285 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HydHO_1185 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HydHO_0214 UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HydHO_0376 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HydHO_1468 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D HydHO_0437 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HydHO_0361 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HydHO_0850 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HydHO_1115 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HydHO_1311 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HydHO_1028 Lytic transglycosylase catalytic K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D HydHO_0077 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D HydHO_0011 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HydHO_0901 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:hho01004] D HydHO_0736 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HydHO_0235 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HydHO_0500 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HydHO_0498 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HydHO_0927 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HydHO_1565 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HydHO_0090 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HydHO_0782 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HydHO_0234 phosphate:acyl-(acyl carrier protein) acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HydHO_1187 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HydHO_0423 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:hho01006] D HydHO_1232 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HydHO_0907 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HydHO_1242 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HydHO_0122 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HydHO_1033 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:hho01007] D HydHO_0660 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D HydHO_0626 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HydHO_0368 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HydHO_1117 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HydHO_0395 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HydHO_0341 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HydHO_0772 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HydHO_1211 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HydHO_1051 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HydHO_0991 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HydHO_0456 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HydHO_0551 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HydHO_1568 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HydHO_1567 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HydHO_0355 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HydHO_0690 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HydHO_0505 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HydHO_1504 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HydHO_1038 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HydHO_0869 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HydHO_0419 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HydHO_0554 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D HydHO_0476 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HydHO_1089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HydHO_0526 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HydHO_1354 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HydHO_0035 aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HydHO_0484 Adenosylmethionine--8-amino-7-oxononanoatetransa minase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D HydHO_0796 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HydHO_1349 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HydHO_1365 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:hho00194] D HydHO_1082 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HydHO_1016 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HydHO_1521 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HydHO_1009 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HydHO_1010 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HydHO_1012 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HydHO_1011 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HydHO_0875 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HydHO_0873 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HydHO_0126 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:hho03000] D HydHO_1329 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D HydHO_0491 transcriptional regulator, DeoR family K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor D HydHO_0117 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D HydHO_0335 transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D HydHO_0027 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D HydHO_0838 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HydHO_0607 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D HydHO_1210 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D HydHO_0563 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D HydHO_0200 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HydHO_1287 helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D HydHO_1152 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D HydHO_0934 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D HydHO_1380 transcriptional regulator NikR, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D HydHO_0482 amino acid-binding ACT domain protein K03567 gcvR; glycine cleavage system transcriptional repressor D HydHO_0555 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D HydHO_1433 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:hho03021] D HydHO_0292 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HydHO_0257 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HydHO_0258 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HydHO_0923 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D HydHO_1498 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D HydHO_1205 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D HydHO_0978 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D HydHO_1605 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D HydHO_0628 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D HydHO_0252 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D HydHO_0555 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D HydHO_1433 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D HydHO_0683 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:hho03019] D HydHO_0614 RNA-binding protein AU-1/Ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D HydHO_0501 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HydHO_0871 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D HydHO_1014 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HydHO_0298 rhlB; DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HydHO_1243 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HydHO_0148 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HydHO_0683 transcription termination factor Rho K03628 rho; transcription termination factor Rho D HydHO_1382 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HydHO_0857 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HydHO_1219 RNA chaperone Hfq K03666 hfq; host factor-I protein D HydHO_1241 RNA-binding protein Hfq K03666 hfq; host factor-I protein D HydHO_1572 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:hho03011] D HydHO_0062 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D HydHO_1265 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HydHO_0270 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HydHO_0291 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HydHO_0281 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HydHO_0444 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HydHO_0260 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HydHO_0278 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HydHO_1000 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HydHO_0263 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HydHO_0290 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HydHO_0259 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HydHO_0289 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HydHO_0277 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HydHO_0147 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HydHO_0296 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HydHO_0273 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HydHO_0442 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D HydHO_0268 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HydHO_1099 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HydHO_0740 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HydHO_0254 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HydHO_0267 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HydHO_0264 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HydHO_0265 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D HydHO_0276 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HydHO_0279 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HydHO_0441 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HydHO_0255 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D HydHO_0253 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D HydHO_0256 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HydHO_1001 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D HydHO_0274 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D HydHO_0283 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D HydHO_0271 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HydHO_0293 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D HydHO_0280 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HydHO_1041 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HydHO_1039 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HydHO_0115 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D HydHO_0269 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HydHO_0266 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D HydHO_0275 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HydHO_0116 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HydHO_0072 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D HydHO_0272 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D HydHO_0282 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HydHO_0973 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D HydHO_0233 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HydHO_0250 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HydHO_0453 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HydHO_0288 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D HydHO_0950 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D HydHO_R0029 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HydHO_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HydHO_R0033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HydHO_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HydHO_R0030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HydHO_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:hho03009] D HydHO_0501 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HydHO_1429 GTP-binding protein Era K03595 era; GTPase D HydHO_0460 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D HydHO_0555 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D HydHO_1433 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D HydHO_1605 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D HydHO_0628 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D HydHO_0252 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D HydHO_1048 ribosomal RNA adenine methylase transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HydHO_1351 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D HydHO_0082 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D HydHO_0951 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HydHO_0852 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HydHO_1603 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HydHO_0436 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HydHO_0311 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HydHO_1375 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HydHO_1606 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D HydHO_0021 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HydHO_1489 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HydHO_0863 (SSU ribosomal protein S18P)-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D HydHO_1259 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D HydHO_0165 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D HydHO_0781 (LSU ribosomal protein L11P)-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D HydHO_0614 RNA-binding protein AU-1/Ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D HydHO_0207 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HydHO_0298 rhlB; DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HydHO_0479 ribosome-associated GTPase EngA K03977 engA; GTPase D HydHO_1220 GTP-binding protein HflX K03665 hflX; GTPase D HydHO_1207 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HydHO_1344 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HydHO_1315 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D HydHO_1604 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D HydHO_1144 iojap-like protein K09710 ybeB; ribosome-associated protein D HydHO_1397 metalloprotein, YbeY/UPF0054 family K07042 ybeY; probable rRNA maturation factor D HydHO_1111 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D HydHO_0504 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:hho03016] D HydHO_1422 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D HydHO_0690 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HydHO_0772 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HydHO_1051 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HydHO_0341 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HydHO_0395 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HydHO_0991 lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HydHO_0456 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HydHO_1504 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HydHO_0505 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HydHO_0355 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HydHO_1117 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HydHO_1211 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HydHO_0551 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HydHO_1038 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HydHO_0869 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HydHO_0626 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HydHO_0368 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HydHO_0463 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HydHO_1214 N(2),N(2)-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D HydHO_0336 tRNA methyltransferase complex GCD14 subunit K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D HydHO_1059 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HydHO_0922 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D HydHO_1328 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HydHO_1207 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HydHO_0122 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HydHO_0684 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D HydHO_0417 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HydHO_0988 RNA ligase partner, MJ_0950 family K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D HydHO_0854 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D HydHO_0389 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D HydHO_1568 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HydHO_1567 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HydHO_0660 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D HydHO_0993 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D HydHO_0848 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HydHO_1518 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D HydHO_0428 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HydHO_0125 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HydHO_0346 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HydHO_0386 Queuosine synthesis K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HydHO_1080 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D HydHO_0385 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D HydHO_0861 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D HydHO_0495 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D HydHO_0492 Queuosine synthesis K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HydHO_0031 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HydHO_1124 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HydHO_1278 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HydHO_0649 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HydHO_1180 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HydHO_1580 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D HydHO_0219 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HydHO_1522 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HydHO_1435 putative molecular chaperone, inactive metal-dependent protease like protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D HydHO_0123 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HydHO_1014 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HydHO_0148 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:hho03012] D HydHO_1007 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HydHO_0454 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D HydHO_1264 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D HydHO_0262 translation elongation factor Tu K02358 tuf; elongation factor Tu D HydHO_0249 translation elongation factor Tu K02358 tuf; elongation factor Tu D HydHO_0261 translation elongation factor G K02355 fusA; elongation factor G D HydHO_0974 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HydHO_1240 ribosome recycling factor K02838 frr; ribosome recycling factor D HydHO_0806 cyclic nucleotide-binding protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D HydHO_0949 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HydHO_0287 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HydHO_0338 translation elongation factor P K02356 efp; elongation factor P D HydHO_0030 tRNA synthetase class II (D K and N) K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D HydHO_0024 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:hho03110] D HydHO_0676 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HydHO_1462 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D HydHO_0152 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HydHO_0800 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D HydHO_1382 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HydHO_0857 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HydHO_0581 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D HydHO_0026 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D HydHO_1195 GrpE protein K03687 GRPE; molecular chaperone GrpE D HydHO_0731 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D HydHO_0856 Chaperonin Cpn10 K04078 groES; chaperonin GroES D HydHO_0924 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_1159 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D HydHO_0507 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HydHO_0873 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HydHO_1439 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A D HydHO_0049 Hydrogenase-3 nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D HydHO_0046 Hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D HydHO_0878 Formiminotransferase domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D HydHO_0407 SurA domain containing protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D HydHO_0610 thioredoxin K03671 TXN; thioredoxin D HydHO_1252 Thioredoxin domain-containing protein K03671 TXN; thioredoxin D HydHO_1061 disulfide bond isomerase, DsbC/G K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HydHO_0631 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] C 04131 Membrane trafficking [BR:hho04131] D HydHO_0964 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HydHO_1480 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D HydHO_0461 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HydHO_1492 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HydHO_0568 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HydHO_0084 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:hho04121] C 03051 Proteasome C 03032 DNA replication proteins [BR:hho03032] D HydHO_0650 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HydHO_1046 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HydHO_0113 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D HydHO_0803 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta D HydHO_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HydHO_0135 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HydHO_0540 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D HydHO_1499 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HydHO_0443 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D HydHO_1589 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HydHO_1083 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HydHO_0823 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HydHO_0205 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HydHO_0406 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HydHO_1318 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HydHO_1040 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HydHO_0890 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HydHO_0354 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HydHO_1599 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HydHO_1022 DNA topoisomerase type IA central domain protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D HydHO_0247 Reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:hho03036] D HydHO_0501 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HydHO_1046 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HydHO_0113 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D HydHO_0803 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta D HydHO_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HydHO_1219 RNA chaperone Hfq K03666 hfq; host factor-I protein D HydHO_1241 RNA-binding protein Hfq K03666 hfq; host factor-I protein D HydHO_0473 condensin subunit Smc K03529 smc; chromosome segregation protein D HydHO_0325 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D HydHO_1393 cell division protein FtsA K03590 ftsA; cell division protein FtsA D HydHO_0850 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HydHO_0142 cell division septal protein K03589 ftsQ; cell division protein FtsQ D HydHO_0213 cell cycle protein K03588 ftsW; cell division protein FtsW D HydHO_0156 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HydHO_0901 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HydHO_1338 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D HydHO_1337 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D HydHO_1336 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D HydHO_0358 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D HydHO_0359 cell shape-determining protein K03570 mreC; rod shape-determining protein MreC D HydHO_1120 cell cycle protein K05837 rodA; rod shape determining protein RodA D HydHO_0417 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HydHO_0951 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HydHO_0428 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HydHO_0596 integrase family protein K04763 xerD; integrase/recombinase XerD D HydHO_1327 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D HydHO_0107 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HydHO_0367 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:hho03400] D HydHO_1049 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D HydHO_0839 DNA photolyase FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D HydHO_1455 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HydHO_0884 mutY; DNA-(apurinic or apyrimidinic site) lyase, MutY K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HydHO_0149 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HydHO_1460 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HydHO_1320 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HydHO_0890 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HydHO_1193 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HydHO_0830 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D HydHO_1236 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D HydHO_1436 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HydHO_0257 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HydHO_0258 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HydHO_0292 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HydHO_1147 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D HydHO_1589 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HydHO_1083 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HydHO_0823 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HydHO_0205 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HydHO_0406 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HydHO_1318 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HydHO_0443 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D HydHO_1355 recA protein K03553 recA; recombination protein RecA D HydHO_0868 endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D HydHO_1611 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HydHO_0769 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D HydHO_1085 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D HydHO_0957 DNA replication and repair protein RadA K04485 radA; DNA repair protein RadA/Sms D HydHO_1253 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HydHO_0244 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D HydHO_0778 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D HydHO_1173 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D HydHO_0402 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D HydHO_0354 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HydHO_1599 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HydHO_1046 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HydHO_0113 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D HydHO_0803 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta D HydHO_0812 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D HydHO_1421 PHP domain protein K02347 polX; DNA polymerase (family X) D HydHO_0455 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D HydHO_1297 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HydHO_1216 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HydHO_1562 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:hho03029] D HydHO_1502 Cytochrome b/b6 domain containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HydHO_1007 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HydHO_0454 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D HydHO_1264 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D HydHO_0262 translation elongation factor Tu K02358 tuf; elongation factor Tu D HydHO_0249 translation elongation factor Tu K02358 tuf; elongation factor Tu D HydHO_0261 translation elongation factor G K02355 fusA; elongation factor G D HydHO_1429 GTP-binding protein Era K03595 era; GTPase D HydHO_0626 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HydHO_1051 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HydHO_0456 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HydHO_0395 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HydHO_1434 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HydHO_0353 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HydHO_1356 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HydHO_0443 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D HydHO_0625 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D HydHO_1488 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D HydHO_1382 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HydHO_1195 GrpE protein K03687 GRPE; molecular chaperone GrpE D HydHO_0857 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HydHO_0856 Chaperonin Cpn10 K04078 groES; chaperonin GroES D HydHO_0581 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D HydHO_0026 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D HydHO_1328 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HydHO_1327 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D HydHO_0877 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HydHO_0362 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:hho02000] D HydHO_0997 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D HydHO_0157 ABC transporter domain-containing protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D HydHO_0935 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HydHO_0943 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HydHO_0936 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D HydHO_0937 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HydHO_0185 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HydHO_0833 virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HydHO_0348 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HydHO_0187 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HydHO_1333 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HydHO_0186 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HydHO_1590 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D HydHO_1591 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D HydHO_1592 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D HydHO_1593 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HydHO_1182 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HydHO_0529 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D HydHO_0471 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HydHO_1509 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HydHO_1529 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D HydHO_1530 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D HydHO_0300 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HydHO_0446 ABC-type transport system, involved in lipoprotein release, permease component K09808 lolC_E; lipoprotein-releasing system permease protein D HydHO_0447 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HydHO_1451 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HydHO_1450 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HydHO_0010 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D HydHO_0009 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HydHO_0318 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D HydHO_0541 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D HydHO_0979 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D HydHO_0791 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D HydHO_0084 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D HydHO_1437 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel D HydHO_0931 ammonium transporter K03320 amt; ammonium transporter, Amt family D HydHO_0622 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D HydHO_0623 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D HydHO_0960 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D HydHO_0704 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D HydHO_0380 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D HydHO_0705 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D HydHO_0959 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D HydHO_0381 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D HydHO_0572 camphor resistance protein CrcB K06199 crcB; fluoride exporter D HydHO_0088 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HydHO_0908 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HydHO_0790 Carbohydrate-selective porin OprB K16080 mnoP; high affinity Mn2+ porin D HydHO_1378 Carbohydrate-selective porin OprB K16080 mnoP; high affinity Mn2+ porin D HydHO_0448 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D HydHO_0608 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HydHO_0700 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HydHO_0703 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HydHO_0787 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D HydHO_0561 outer membrane efflux protein K12340 tolC; outer membrane protein D HydHO_0007 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HydHO_0625 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D HydHO_1488 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D HydHO_1143 Beta-barrel assembly machine subunit BamD K05807 bamD; outer membrane protein assembly factor BamD D HydHO_1254 hypothetical protein K09800 tamB; translocation and assembly module TamB D HydHO_0377 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D HydHO_0430 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D HydHO_0713 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D HydHO_0789 cusA; heavy metal efflux pump, CzcA family, CusA K15726 czcA; heavy metal efflux system protein D HydHO_1255 small multidrug resistance protein K03297 emrE; small multidrug resistance pump D HydHO_0112 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D HydHO_0619 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D HydHO_0569 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D HydHO_1379 high-affinity nickel-transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D HydHO_1480 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D HydHO_0450 arsenite efflux membrane protein ArsB K03893 arsB; arsenical pump membrane protein D HydHO_1468 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D HydHO_0557 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D HydHO_0213 cell cycle protein K03588 ftsW; cell division protein FtsW D HydHO_1400 Cystinosin/ERS1p repeat protein K15383 K15383; MtN3 and saliva related transmembrane protein D HydHO_0706 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D HydHO_0382 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D HydHO_1112 TonB family protein K03832 tonB; periplasmic protein TonB D HydHO_1467 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D HydHO_0314 arsenite oxidase, small subunit K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1] D HydHO_0313 arsenite oxidase, large subunit K08356 aoxB; arsenite oxidase large subunit [EC:1.20.2.1 1.20.9.1] D HydHO_0912 molybdopterin dinucleotide-binding region K08357 ttrA; tetrathionate reductase subunit A D HydHO_0910 Fe-S-cluster-containing hydrogenase subunit K08358 ttrB; tetrathionate reductase subunit B D HydHO_0911 Polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C D HydHO_0847 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D HydHO_0788 cusB; efflux transporter, RND family, MFP subunit, CusB K15727 czcB; membrane fusion protein, heavy metal efflux system D HydHO_1372 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D HydHO_1409 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:hho02044] D HydHO_0561 outer membrane efflux protein K12340 tolC; outer membrane protein D HydHO_1555 type II secretion system protein D (GspD) K02453 gspD; general secretion pathway protein D D HydHO_0078 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D HydHO_1495 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D HydHO_1552 gpsF; Type II secretion system F domain, GpsF K02455 gspF; general secretion pathway protein F D HydHO_1554 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D HydHO_0897 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D HydHO_1549 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D HydHO_0982 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D HydHO_1109 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HydHO_1266 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D HydHO_0246 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D HydHO_0516 gpsF; Type II secretion system F domain, GpsF K02653 pilC; type IV pilus assembly protein PilC D HydHO_1223 gpsF; Type II secretion system F domain, GpsF K02653 pilC; type IV pilus assembly protein PilC D HydHO_0518 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D HydHO_0595 twitching motility protein K02669 pilT; twitching motility protein PilT D HydHO_0245 twitching motility protein K02669 pilT; twitching motility protein PilT D HydHO_0728 type II secretion system protein E K02669 pilT; twitching motility protein PilT D HydHO_0114 pilin K08084 fimT; type IV fimbrial biogenesis protein FimT D HydHO_1353 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D HydHO_0089 phosphoribosyltransferase K02242 comFC; competence protein ComFC D HydHO_1457 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HydHO_0648 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HydHO_0966 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein D HydHO_0179 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D HydHO_0639 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HydHO_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HydHO_0645 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HydHO_0646 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HydHO_0647 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D HydHO_0550 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1 D HydHO_1061 disulfide bond isomerase, DsbC/G K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HydHO_0631 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HydHO_0984 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HydHO_1110 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D HydHO_0251 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HydHO_0129 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D HydHO_0807 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HydHO_0284 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D HydHO_0295 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HydHO_0606 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HydHO_0801 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HydHO_0877 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HydHO_0197 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D HydHO_0198 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D HydHO_1108 Sec-independent protein secretion pathway component K03117 tatB; sec-independent protein translocase protein TatB D HydHO_1107 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:hho02042] D HydHO_0088 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HydHO_0908 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:hho02022] D HydHO_0799 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HydHO_0365 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HydHO_1237 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HydHO_0013 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HydHO_1316 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D HydHO_0315 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D HydHO_0375 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] C 02035 Bacterial motility proteins [BR:hho02035] D HydHO_1332 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D HydHO_0375 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HydHO_0639 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HydHO_0645 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HydHO_0646 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HydHO_0647 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D HydHO_1457 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HydHO_0648 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HydHO_0637 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HydHO_0180 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HydHO_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HydHO_0179 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D HydHO_0583 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D HydHO_0158 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D HydHO_1359 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D HydHO_0643 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D HydHO_0178 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D HydHO_0174 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HydHO_0177 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HydHO_0641 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HydHO_1514 FlgF; flagellar hook-basal body protein, FlgF or FlgG K02391 flgF; flagellar basal-body rod protein FlgF D HydHO_0159 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D HydHO_0582 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D HydHO_0642 FlgF; flagellar hook-basal body protein, FlgF or FlgG K02390 flgE; flagellar hook protein FlgE D HydHO_0821 flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D HydHO_0820 flagellin/flagellar hook associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL D HydHO_1261 flagellin domain protein K02406 fliC; flagellin D HydHO_0866 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D HydHO_0865 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D HydHO_0978 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D HydHO_0622 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D HydHO_0623 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D HydHO_0618 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D HydHO_0867 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D HydHO_1458 GTP-binding signal recognition particle SRP54 G-domain containing protein K02404 flhF; flagellar biosynthesis protein FlhF D HydHO_1459 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D HydHO_0595 twitching motility protein K02669 pilT; twitching motility protein PilT D HydHO_0245 twitching motility protein K02669 pilT; twitching motility protein PilT D HydHO_0728 type II secretion system protein E K02669 pilT; twitching motility protein PilT D HydHO_1266 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D HydHO_0246 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D HydHO_0516 gpsF; Type II secretion system F domain, GpsF K02653 pilC; type IV pilus assembly protein PilC D HydHO_1223 gpsF; Type II secretion system F domain, GpsF K02653 pilC; type IV pilus assembly protein PilC D HydHO_1109 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HydHO_0518 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:hho04812] D HydHO_0928 putative dioxygenase K06990 MEMO1; MEMO1 family protein D HydHO_0358 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D HydHO_0156 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HydHO_1393 cell division protein FtsA K03590 ftsA; cell division protein FtsA D HydHO_1338 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D HydHO_1337 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D HydHO_1336 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor C 04147 Exosome [BR:hho04147] D HydHO_1243 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HydHO_0461 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HydHO_0568 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HydHO_0857 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HydHO_1382 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HydHO_0196 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HydHO_0262 translation elongation factor Tu K02358 tuf; elongation factor Tu D HydHO_0249 translation elongation factor Tu K02358 tuf; elongation factor Tu D HydHO_0463 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HydHO_0782 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HydHO_0513 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HydHO_0285 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HydHO_0163 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HydHO_0474 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HydHO_0604 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HydHO_0137 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HydHO_0533 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HydHO_0792 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D HydHO_0783 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HydHO_0091 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HydHO_0328 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1229 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HydHO_1270 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HydHO_1340 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HydHO_1492 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:hho02048] D HydHO_1173 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D HydHO_0402 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D HydHO_1174 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 D HydHO_1171 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D HydHO_0669 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D HydHO_0666 hypothetical protein K19088 cst1; CRISPR-associated protein Cst1 D HydHO_0667 CRISPR-associated autoregulator, Cst2 family K19075 cst2; CRISPR-associated protein Cst2 D HydHO_1169 CRISPR-associated autoregulator, Cst2 family K19075 cst2; CRISPR-associated protein Cst2 D HydHO_0401 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D HydHO_1172 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D HydHO_1170 CRISPR-associated protein Cas5 family K19090 cas5t; CRISPR-associated protein Cas5t D HydHO_0668 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t D HydHO_0665 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D HydHO_0110 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HydHO_0108 restriction modification system DNA specificity domain containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HydHO_0106 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HydHO_1288 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D HydHO_1287 helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D HydHO_0156 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HydHO_0358 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D HydHO_1328 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:hho01504] D HydHO_0007 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HydHO_1372 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D HydHO_0561 outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:hho03100] D HydHO_R0031 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HydHO_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HydHO_R0011 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HydHO_R0049 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HydHO_R0004 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HydHO_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HydHO_R0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HydHO_R0028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HydHO_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HydHO_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HydHO_R0023 tRNA-His K14226 tRNA-His; tRNA His D HydHO_R0032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HydHO_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HydHO_R0025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HydHO_R0054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HydHO_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HydHO_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D HydHO_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D HydHO_R0050 tRNA-Met K14230 tRNA-Met; tRNA Met D HydHO_R0053 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HydHO_R0002 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HydHO_R0006 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HydHO_R0007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HydHO_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HydHO_R0015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HydHO_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HydHO_R0048 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HydHO_R0016 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HydHO_R0013 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HydHO_R0019 tRNA-Val K14237 tRNA-Val; tRNA Val D HydHO_R0021 tRNA-Val K14237 tRNA-Val; tRNA Val D HydHO_R0040 tRNA-Val K14237 tRNA-Val; tRNA Val D HydHO_R0033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HydHO_R0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HydHO_R0030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HydHO_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HydHO_R0029 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HydHO_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HydHO_R0018 Bacteria_small_SRP K01983 ffs; SRP RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HydHO_0478 FAD linked oxidase domain protein K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D HydHO_1423 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D HydHO_0842 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D HydHO_1387 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HydHO_0037 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HydHO_0593 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D HydHO_0562 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D HydHO_1128 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D HydHO_0371 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HydHO_1296 NADH/Ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D HydHO_0573 NADH/Ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D HydHO_0577 hydrogenase 4 membrane component (E) K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D HydHO_1294 hydrogenase 4 membrane component (E) K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D HydHO_0576 NADH/Ubiquinone/plastoquinone (complex I) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D HydHO_1293 NADH/Ubiquinone/plastoquinone (complex I) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D HydHO_0566 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D HydHO_0687 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D HydHO_1326 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D HydHO_0695 lyso-ornithine lipid acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D HydHO_1463 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D HydHO_1127 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D HydHO_0944 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D HydHO_0829 putative methyltransferase K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D HydHO_1224 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HydHO_0836 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D HydHO_0006 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D HydHO_0067 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D HydHO_1428 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D HydHO_0034 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D HydHO_0837 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HydHO_1228 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HydHO_0481 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HydHO_1466 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HydHO_0696 putative deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D HydHO_0141 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D HydHO_0155 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D HydHO_0240 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D HydHO_1619 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D HydHO_0734 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HydHO_1416 Conserved carboxylase region K20140 cfiA; 2-oxoglutarate carboxylase large subunit [EC:6.4.1.7] D HydHO_1415 acetyl-CoA carboxylase, biotin carboxylase K20141 cfiB; 2-oxoglutarate carboxylase small subunit [EC:6.4.1.7] C 99981 Carbohydrate metabolism D HydHO_0420 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D HydHO_0632 Histone deacetylase K04768 acuC; acetoin utilization protein AcuC C 99982 Energy metabolism D HydHO_0918 4Fe-4S ferredoxin K05337 fer; ferredoxin D HydHO_0578 formate hydrogenlyase subunit 4 (HycD) K15829 hycD; formate hydrogenlyase subunit 4 D HydHO_1292 NADH dehydrogenase (ubiquinone) 30 kDa subunit K15830 hycE; formate hydrogenlyase subunit 5 D HydHO_0309 NADH:ubiquinone oxidoreductase chain I-like protein K14120 ehbK; energy-converting hydrogenase B subunit K D HydHO_0656 putative ferredoxin-type protein, NapH/MauN family K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D HydHO_1523 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HydHO_1369 putative integral membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D HydHO_0326 molybdopterin-guainine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D HydHO_0921 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein C 99974 Translation D HydHO_0764 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D HydHO_0154 trigger factor domain-containing protein K03545 tig; trigger factor D HydHO_1013 SsrA-binding protein K03664 smpB; SsrA-binding protein D HydHO_0052 Hydrogenase maturation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D HydHO_0051 Hydrogenase maturation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D HydHO_0050 Hydrogenase maturation protein, carbamoyl dehydratase HypE K04655 hypE; hydrogenase expression/formation protein HypE D HydHO_0048 Hydrogenase maturation protein, carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D HydHO_0827 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D HydHO_1414 OsmC family protein K07397 yhfA; putative redox protein D HydHO_1464 cytochrome c biogenesis protein K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D HydHO_0965 DNA-3-methyladenine glycosylase III K07457 K07457; endonuclease III related protein D HydHO_1618 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease D HydHO_0081 SMF family protein K04096 smf; DNA processing protein D HydHO_0674 transposase, IS605 OrfB family K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D HydHO_0333 phage shock protein A (PspA) family protein K03969 pspA; phage shock protein A B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HydHO_0531 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D HydHO_0885 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D HydHO_0682 GTP-binding protein TypA K06207 typA; GTP-binding protein D HydHO_1396 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D HydHO_0544 putative Ser/Thr protein kinase K07176 K07176; putative serine/threonine protein kinase C 99992 Structural proteins D HydHO_0201 periplasmic chaperone for outer membrane proteins Skp K06142 hlpA; outer membrane protein D HydHO_1212 Peptidase M23 K06194 nlpD; lipoprotein NlpD D HydHO_1087 membrane protein implicated in regulation of membrane protease activity K07340 ybbJ; inner membrane protein D HydHO_0008 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein D HydHO_0164 cytochrome c assembly protein K02497 hemX; HemX protein C 99994 Others D HydHO_0012 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D HydHO_1578 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D HydHO_1431 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D HydHO_0301 putative lipoprotein involved in nitrous oxide reduction K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D HydHO_0003 t-RNA-binding domain-containing protein K06878 K06878; tRNA-binding protein D HydHO_1209 globin K06886 glbN; hemoglobin D HydHO_1157 Patatin K07001 K07001; NTE family protein D HydHO_0685 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D HydHO_0617 putative membrane protein K07058 K07058; membrane protein D HydHO_1330 HAD-superfamily hydrolase, subfamily IA, variant 1 K11777 K11777; HAD superfamily phosphatase D HydHO_1471 putative membrane protein (DUF2078) K08982 K08982; putative membrane protein C 99997 Function unknown D HydHO_0060 thymidylate kinase K06888 K06888; uncharacterized protein D HydHO_0339 putative ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein D HydHO_0983 CoA-binding domain protein K06929 K06929; uncharacterized protein D HydHO_0297 putative RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein D HydHO_0512 4-vinyl reductase 4VR K07013 K07013; uncharacterized protein D HydHO_0413 hypothetical protein K07028 K07028; uncharacterized protein D HydHO_0109 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D HydHO_0701 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D HydHO_1235 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D HydHO_1036 putative permease K07090 K07090; uncharacterized protein D HydHO_0133 putative permease K07090 K07090; uncharacterized protein D HydHO_0914 putative permease K07090 K07090; uncharacterized protein D HydHO_0002 putative permease K07090 K07090; uncharacterized protein D HydHO_1275 putative peroxiredoxin K07092 K07092; uncharacterized protein D HydHO_1069 DsrE family protein K07092 K07092; uncharacterized protein D HydHO_1078 peroxiredoxins-like protein K07092 K07092; uncharacterized protein D HydHO_0061 phosphoesterase DHHA1 K07097 K07097; uncharacterized protein D HydHO_1104 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D HydHO_1283 ATPase K07133 K07133; uncharacterized protein D HydHO_1399 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein D HydHO_0462 putative membrane protein, putative Na+ channel or pump K07150 K07150; uncharacterized protein D HydHO_0370 Zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein D HydHO_0876 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D HydHO_0039 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D HydHO_0891 DsrE/DsrF family protein, possibly involved in intracellular suflur reduction K09004 K09004; uncharacterized protein D HydHO_1361 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D HydHO_0570 protein of unknown function DUF190 K09137 K09137; uncharacterized protein D HydHO_0571 protein of unknown function DUF190 K09137 K09137; uncharacterized protein D HydHO_1470 AMMECR1 domain protein K09141 K09141; uncharacterized protein D HydHO_1576 protein of unknown function DUF354 K09726 K09726; uncharacterized protein D HydHO_0344 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D HydHO_0477 protein of unknown function DUF343 K09791 K09791; uncharacterized protein D HydHO_0192 hypothetical protein K09792 K09792; uncharacterized protein D HydHO_0433 hypothetical protein K09794 K09794; uncharacterized protein D HydHO_1081 protein of unknown function DUF507 K09804 K09804; uncharacterized protein D HydHO_0535 Protein of unknown function DUF2309 K09822 K09822; uncharacterized protein D HydHO_1094 Protein of unknown function DUF2309 K09822 K09822; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 21, 2024