+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Helicobacter pylori Shi417
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ACRISPR-Cas system
B Universal Cas proteins
B Type I CRISPR-Cas system
C Type I signiture cas proteins
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C HPSH417_02205 type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C HPSH417_04110 type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C HPSH417_07660 type I restriction enzyme R protein HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C HPSH417_02195 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C HPSH417_07470 type I R-M system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C HPSH417_03820 anti-codon nuclease masking agent PrrB K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C HPSH417_02200 type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C HPSH417_07480 type I restriction enzyme M protein (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
D HPSH417_00435 type II restriction enzyme R protein (hsdR) K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D HPSH417_01325 Endonuclease MjaVIP K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
C DNA methyltransferases
D HPSH417_02295 type II adenine specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HPSH417_04415 type II DNA modification methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HPSH417_05930 Site-specific DNA-methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HPSH417_00440 type I restriction enzyme M protein HsdM K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HPSH417_00220 adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HPSH417_01330 adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HPSH417_06725 type IIS restriction enzyme M1 protein (mod) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HPSH417_06645 adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HPSH417_00225 cytosine specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HPSH417_05315 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HPSH417_01770 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HPSH417_02305 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HPSH417_04145 site-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HPSH417_07775 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HPSH417_06730 type IIS restriction enzyme M2 protein (mod) K24451 zim; modification methylase
B Type III R-M system
C HPSH417_07400 type III restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
C HPSH417_06805 putative type III restriction enzyme R protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
C HPSH417_01310 type II DNA modification methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
C HPSH417_06800 putative type III restriction enzyme M protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
C HPSH417_07405 type III DNA modification methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
C HPSH417_01845 archaeal Holliday junction resolvase/Mrr protein-like protein K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
D HPSH417_05605 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HPSH417_04345 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D HPSH417_04765 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HPSH417_06750 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HPSH417_02270 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C HPSH417_01110 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023