+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Helicobacter pylori Shi417

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ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C HPSH417_02205 type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C HPSH417_04110 type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C HPSH417_07660 type I restriction enzyme R protein HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C HPSH417_02195 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C HPSH417_07470 type I R-M system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C HPSH417_03820 anti-codon nuclease masking agent PrrB K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C HPSH417_02200 type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C HPSH417_07480 type I restriction enzyme M protein (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases D HPSH417_00435 type II restriction enzyme R protein (hsdR) K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D HPSH417_01325 Endonuclease MjaVIP K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] C DNA methyltransferases D HPSH417_02295 type II adenine specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HPSH417_04415 type II DNA modification methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HPSH417_05930 Site-specific DNA-methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HPSH417_00440 type I restriction enzyme M protein HsdM K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HPSH417_00220 adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HPSH417_01330 adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HPSH417_06725 type IIS restriction enzyme M1 protein (mod) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HPSH417_06645 adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HPSH417_00225 cytosine specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HPSH417_05315 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HPSH417_01770 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HPSH417_02305 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HPSH417_04145 site-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HPSH417_07775 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HPSH417_06730 type IIS restriction enzyme M2 protein (mod) K24451 zim; modification methylase B Type III R-M system C HPSH417_07400 type III restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5] C HPSH417_06805 putative type III restriction enzyme R protein K01156 res; type III restriction enzyme [EC:3.1.21.5] C HPSH417_01310 type II DNA modification methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C HPSH417_06800 putative type III restriction enzyme M protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C HPSH417_07405 type III DNA modification methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C HPSH417_01845 archaeal Holliday junction resolvase/Mrr protein-like protein K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D HPSH417_05605 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D HPSH417_04345 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D HPSH417_04765 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HPSH417_06750 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D HPSH417_02270 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C HPSH417_01110 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023