+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Halalkalicoccus jeotgali

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D HacjB3_07790 nucleolar protein-like protein K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D HacjB3_12080 H/ACA RNA-protein complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase C Kinase C Other 90S particles D HacjB3_03715 KH domain protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D HacjB3_03730 RIO-like kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D HacjB3_13585 serine/threonine protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D HacjB3_07425 putative nucleotide kinase (TBD) K18532 AK6; adenylate kinase [EC:2.7.4.3] D HacjB3_04175 hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] C Other pre-40S particles D HacjB3_13430 putative ATPase RIL K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D HacjB3_13345 GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E HacjB3_05070 ribonuclease P protein component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E HacjB3_09350 Ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E HacjB3_08025 Ribonuclease P K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases C Export and cytoplasmic maturation factors D HacjB3_01415 translation initiation factor eIF-6 K03264 EIF6; translation initiation factor 6 D HacjB3_01330 NMD3 family protein K07562 NMD3; 60S ribosomal export protein NMD3 D HacjB3_09340 Ribosome maturation protein SBDS-like protein K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D HacjB3_07375 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D HacjB3_04495 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles B Other ribosome biogenesis factors C HacjB3_00660 GTP-binding protein K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D HacjB3_07790 nucleolar protein-like protein K14564 NOP56; nucleolar protein 56 D HacjB3_07795 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D HacjB3_08675 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D HacjB3_08225 H/ACA RNA-protein complex component Gar1 K07569 gar1; RNA-binding protein D HacjB3_12080 H/ACA RNA-protein complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C HacjB3_14475 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D HacjB3_08625 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] C 23S rRNA modification factors D HacjB3_02010 ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors C HacjB3_13260 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C HacjB3_14575 RimK domain protein ATP-grasp K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] C HacjB3_08965 YcaO-like family domain protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor B rRNA processing factors B rRNA helicases B GTPases C HacjB3_00660 GTP-binding protein K03595 era; GTPase C HacjB3_09330 GTP-binding proten HflX K03665 hflX; GTPase B Other maturation factors C HacjB3_00415 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C HacjB3_11245 hypothetical protein K07574 yhbY; RNA-binding protein C HacjB3_05990 translation-associated GTPase K06942 ychF; ribosome-binding ATPase C HacjB3_12280 translation-associated GTPase K06942 ychF; ribosome-binding ATPase C HacjB3_13545 Predicted ribonuclease of the G/E family protein K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024