+D GENES KO #

  KEGG Orthology (KO) - Haematospirillum jordaniae

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:hjo00010] D AY555_09940 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D AY555_05360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AY555_07685 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D AY555_09470 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AY555_09295 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AY555_08880 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AY555_02065 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AY555_02070 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AY555_03455 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AY555_08860 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AY555_09050 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AY555_09715 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D AY555_08075 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AY555_08080 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AY555_08085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_03580 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AY555_03205 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AY555_00680 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:hjo00020] D AY555_08945 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AY555_04600 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AY555_01455 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AY555_04770 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AY555_04775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04765 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AY555_04760 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AY555_09455 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AY555_09460 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AY555_09445 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AY555_09450 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AY555_05700 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AY555_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AY555_08075 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AY555_08080 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AY555_08085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:hjo00030] D AY555_05360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AY555_11200 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AY555_11195 hypothetical protein K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D AY555_09290 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AY555_09300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AY555_04805 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AY555_08145 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AY555_07100 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D AY555_07095 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D AY555_00680 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AY555_04885 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AY555_11190 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D AY555_11205 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AY555_09295 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AY555_09470 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AY555_07685 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:hjo00040] D AY555_00685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_03340 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_00690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AY555_09290 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:hjo00051] D AY555_06760 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AY555_02565 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AY555_02135 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AY555_07685 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D AY555_09470 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AY555_09295 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AY555_08880 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AY555_08145 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AY555_03025 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:hjo00052] D AY555_00690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AY555_00680 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AY555_09940 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D AY555_07685 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:hjo00053] D AY555_00685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_03340 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_03345 NAD-dependent dehydratase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-] D AY555_02640 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:hjo00500] D AY555_00690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AY555_00680 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AY555_09940 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D AY555_05360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AY555_06760 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hjo00520] D AY555_08530 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AY555_03855 hypothetical protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D AY555_01235 hypothetical protein K18676 gspK; glucosamine kinase [EC:2.7.1.8] D AY555_06760 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AY555_06995 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AY555_07525 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D AY555_06990 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AY555_06180 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D AY555_04150 hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D AY555_04145 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D AY555_06605 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AY555_06095 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AY555_11250 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D AY555_11005 Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] D AY555_11010 GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D AY555_02635 GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D AY555_04990 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D AY555_10390 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D AY555_09940 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D AY555_00680 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AY555_00690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AY555_00685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_03340 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_02640 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AY555_03025 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D AY555_05360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AY555_02135 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AY555_02565 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AY555_03345 NAD-dependent dehydratase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-] C 00620 Pyruvate metabolism [PATH:hjo00620] D AY555_03205 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AY555_08075 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AY555_08080 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AY555_08085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_00410 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D AY555_07185 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AY555_07190 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_00395 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_09050 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AY555_01730 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AY555_09230 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AY555_09235 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AY555_01380 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AY555_03580 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AY555_07825 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AY555_05320 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AY555_09080 chaperone protein HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D AY555_06020 hypothetical protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D AY555_08990 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AY555_04230 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AY555_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AY555_05700 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AY555_09715 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hjo00630] D AY555_03205 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AY555_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AY555_08945 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D AY555_04600 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01910 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D AY555_01840 dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D AY555_08675 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AY555_08995 acetyl/propionyl-CoA carboxylase subuit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D AY555_09000 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D AY555_07355 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_07360 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_03985 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D AY555_06020 hypothetical protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D AY555_00815 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AY555_08300 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AY555_11255 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_07265 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_08150 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AY555_02520 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D AY555_02525 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D AY555_02510 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_02515 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AY555_11205 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D AY555_05070 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:hjo00640] D AY555_03205 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AY555_07185 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AY555_07190 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_00395 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_00410 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_01730 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AY555_09230 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AY555_09235 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AY555_01380 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AY555_08050 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D AY555_08995 acetyl/propionyl-CoA carboxylase subuit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D AY555_09000 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D AY555_08675 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AY555_07355 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_07360 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_04760 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AY555_04765 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AY555_03580 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:hjo00650] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_03545 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AY555_07140 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_01840 dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D AY555_09490 class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D AY555_01900 hypothetical protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D AY555_03375 esterase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D AY555_01910 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D AY555_09455 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AY555_09460 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AY555_09445 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AY555_09450 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AY555_10380 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D AY555_10385 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AY555_00410 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D AY555_02985 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AY555_09005 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] C 00660 C5-Branched dibasic acid metabolism D AY555_04760 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AY555_04765 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:hjo00562] D AY555_07410 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AY555_08880 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:hjo00190] D AY555_08760 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D AY555_08755 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D AY555_08750 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D AY555_08745 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D AY555_08740 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D AY555_08735 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D AY555_08730 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D AY555_08725 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D AY555_08720 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D AY555_08715 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D AY555_08710 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D AY555_08705 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D AY555_08700 NADH-quinone oxidoreductase chain 13 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D AY555_08695 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D AY555_09455 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AY555_09460 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AY555_09445 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AY555_09450 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AY555_01345 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AY555_01335 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AY555_01340 cytochrome B K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit D AY555_01080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AY555_07315 cytochrome B562 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D AY555_07305 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D AY555_07300 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D AY555_07310 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AY555_00365 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AY555_05220 cytochrome oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AY555_05225 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AY555_05230 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AY555_05235 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AY555_07840 cytochrome C K08738 CYC; cytochrome c D AY555_06980 hypothetical protein K08738 CYC; cytochrome c D AY555_04820 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AY555_04830 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AY555_04825 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AY555_04815 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AY555_04835 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AY555_04655 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AY555_04665 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AY555_04670 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AY555_04660 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AY555_04245 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D AY555_06695 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:hjo00710] D AY555_02070 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AY555_02065 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AY555_09295 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AY555_09470 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AY555_09300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AY555_08145 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AY555_08880 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AY555_09290 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AY555_04805 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AY555_09715 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D AY555_08990 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AY555_04230 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D AY555_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes [PATH:hjo00720] D AY555_09715 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D AY555_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AY555_05700 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AY555_09455 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AY555_09460 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AY555_09445 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AY555_09450 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AY555_04765 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AY555_04760 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01455 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AY555_04600 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AY555_01730 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AY555_09230 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AY555_09235 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AY555_01380 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AY555_08675 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AY555_07355 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_07360 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_05425 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AY555_01170 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AY555_07190 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_00395 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_07185 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AY555_03205 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:hjo00680] D AY555_08150 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AY555_08860 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AY555_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AY555_09295 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AY555_09470 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D AY555_07685 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D AY555_07185 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D AY555_07190 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_00395 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_03205 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AY555_03455 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AY555_07545 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AY555_09200 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AY555_05925 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:hjo00910] D AY555_00720 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D AY555_03005 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AY555_11255 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_07265 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_03910 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AY555_03905 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AY555_00760 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:hjo00920] D AY555_00455 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AY555_04080 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AY555_00475 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D AY555_07135 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:hjo00061] D AY555_01730 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AY555_09230 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AY555_09235 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AY555_01380 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AY555_05865 acyl carrier protein K02078 acpP; acyl carrier protein D AY555_05855 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AY555_08220 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AY555_05870 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AY555_05860 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_04955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_07805 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AY555_05885 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AY555_06815 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D AY555_09030 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_07150 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:hjo00071] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_07145 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_07140 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D AY555_09030 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_07150 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:hjo00561] D AY555_08215 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AY555_09140 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 00564 Glycerophospholipid metabolism [PATH:hjo00564] D AY555_03225 glycerol-3-phosphate acyltransferase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D AY555_07255 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D AY555_09140 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AY555_04035 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AY555_07775 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AY555_01595 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D AY555_01565 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D AY555_08110 hypothetical protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:hjo00592] D AY555_07145 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:hjo01040] D AY555_03145 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AY555_06975 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:hjo00230] D AY555_07925 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AY555_07095 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D AY555_00680 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AY555_04885 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AY555_05805 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AY555_05095 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D AY555_06720 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AY555_09555 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D AY555_09545 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D AY555_09550 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AY555_06715 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D AY555_07665 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AY555_07670 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AY555_09540 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D AY555_09530 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AY555_03780 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AY555_09580 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AY555_08610 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AY555_04875 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AY555_06285 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AY555_05725 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AY555_03695 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AY555_01770 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D AY555_06300 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AY555_00515 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D AY555_09265 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AY555_01120 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AY555_01125 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AY555_08515 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AY555_02045 phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D AY555_02910 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D AY555_08820 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AY555_06275 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AY555_06690 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AY555_07385 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D AY555_09195 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AY555_07450 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D AY555_00860 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AY555_08560 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] C 00240 Pyrimidine metabolism [PATH:hjo00240] D AY555_01290 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AY555_01285 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AY555_09130 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AY555_09135 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AY555_09675 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AY555_00590 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D AY555_06940 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AY555_01790 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D AY555_07760 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D AY555_05725 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AY555_08560 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AY555_03820 hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AY555_06645 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AY555_08870 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D AY555_02660 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D AY555_08610 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AY555_07085 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D AY555_02220 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D AY555_07450 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D AY555_07090 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D AY555_06600 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D AY555_09265 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AY555_01120 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AY555_01125 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AY555_02045 phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D AY555_02910 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D AY555_08455 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D AY555_04070 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AY555_05685 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AY555_02995 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:hjo00250] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AY555_09145 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AY555_09680 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_10915 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_10935 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_02575 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_02580 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_02630 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_09795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AY555_09790 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AY555_09195 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AY555_09530 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AY555_09130 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AY555_10380 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D AY555_10385 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AY555_03910 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AY555_03905 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AY555_03005 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AY555_01230 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AY555_11255 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_07265 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_01290 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AY555_01285 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AY555_10590 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AY555_09550 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AY555_06995 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AY555_05805 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:hjo00260] D AY555_06810 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AY555_00795 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_02080 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_09475 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AY555_01805 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D AY555_02295 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D AY555_04270 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D AY555_08150 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AY555_06020 hypothetical protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D AY555_03455 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AY555_07545 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AY555_09200 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AY555_05925 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AY555_09285 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AY555_02520 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D AY555_02525 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D AY555_02510 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_02515 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AY555_10375 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D AY555_10370 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D AY555_08785 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D AY555_08790 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AY555_00345 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AY555_01765 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AY555_01385 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AY555_01390 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:hjo00270] D AY555_04080 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AY555_08790 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AY555_08785 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D AY555_01165 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AY555_09885 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AY555_04165 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AY555_07340 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AY555_10425 S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D AY555_04875 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AY555_00315 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D AY555_04490 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AY555_02980 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AY555_06810 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AY555_00795 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_02080 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_09475 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AY555_05570 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AY555_05280 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AY555_04115 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AY555_03580 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AY555_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D AY555_00345 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AY555_01765 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AY555_07545 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AY555_09200 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:hjo00280] D AY555_05570 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AY555_04735 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_07145 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AY555_08995 acetyl/propionyl-CoA carboxylase subuit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D AY555_09000 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D AY555_08675 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D AY555_07355 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_07360 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_02985 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hjo00290] D AY555_05570 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AY555_04735 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:hjo00300] D AY555_09475 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AY555_06810 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AY555_00795 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_02080 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_08800 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AY555_03085 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D AY555_05180 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D AY555_01950 hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AY555_05175 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AY555_03610 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AY555_03295 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AY555_06130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AY555_06125 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:hjo00310] D AY555_04775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_10385 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AY555_07120 lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D AY555_05675 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] C 00220 Arginine biosynthesis [PATH:hjo00220] D AY555_01955 hypothetical protein K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AY555_09795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AY555_09790 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AY555_11285 arginase K01476 rocF; arginase [EC:3.5.3.1] D AY555_10590 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AY555_09550 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AY555_11255 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_07265 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_01290 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AY555_01285 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AY555_03005 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AY555_01945 hypothetical protein K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AY555_01940 hypothetical protein K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D AY555_01950 hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:hjo00330] D AY555_10505 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D AY555_07290 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AY555_07345 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AY555_07340 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AY555_10510 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D AY555_01500 FAD-dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D AY555_11285 arginase K01476 rocF; arginase [EC:3.5.3.1] D AY555_01230 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AY555_11280 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D AY555_01985 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AY555_01990 proA; gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D AY555_02180 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:hjo00340] D AY555_03505 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] C 00350 Tyrosine metabolism [PATH:hjo00350] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AY555_10385 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AY555_03435 fumarylacetoacetate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:hjo00360] D AY555_07620 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_03545 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AY555_08040 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D AY555_07050 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00380 Tryptophan metabolism [PATH:hjo00380] D AY555_04775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hjo00400] D AY555_07020 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AY555_01625 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D AY555_09225 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AY555_03815 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AY555_01620 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71] D AY555_02655 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D AY555_05880 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D AY555_08895 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AY555_08915 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AY555_08920 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D AY555_01785 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D AY555_08925 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D AY555_01385 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AY555_01390 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AY555_05305 cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D AY555_01370 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:hjo00410] D AY555_05270 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_08050 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] C 00430 Taurine and hypotaurine metabolism [PATH:hjo00430] D AY555_06175 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AY555_03005 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D AY555_07190 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_00395 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AY555_07185 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D AY555_08475 hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:hjo00450] D AY555_01165 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AY555_09885 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AY555_08790 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AY555_00315 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D AY555_07585 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D AY555_01315 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D AY555_04130 ferredoxin--NADP(+) reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D AY555_08465 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:hjo00460] D AY555_06175 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AY555_09145 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AY555_08150 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:hjo00470] D AY555_05830 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AY555_06090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AY555_10590 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AY555_09550 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AY555_01530 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3] D AY555_06115 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AY555_03610 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AY555_03295 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AY555_08040 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D AY555_07050 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:hjo00480] D AY555_06175 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AY555_05280 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AY555_04115 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AY555_00470 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AY555_02370 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AY555_03180 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AY555_07015 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D AY555_01455 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AY555_11200 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AY555_11230 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D AY555_07290 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AY555_07345 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AY555_07340 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D AY555_00210 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D AY555_11185 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:hjo00540] D AY555_07810 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AY555_06070 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AY555_07800 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AY555_07815 UDP-2,3-diacylglucosamine pyrophosphatase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AY555_07820 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AY555_01830 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AY555_03065 D-arabinose 5-phosphate K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AY555_08865 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AY555_01365 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AY555_01825 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AY555_01835 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AY555_03285 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AY555_03395 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AY555_04860 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D AY555_09695 glycosyl transferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hjo00541] D AY555_00690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AY555_00685 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_03340 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AY555_02640 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AY555_10360 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AY555_02550 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AY555_02565 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D AY555_02135 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AY555_06990 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AY555_11250 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D AY555_04990 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D AY555_02130 hypothetical protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] D AY555_11010 GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D AY555_02635 GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D AY555_11005 Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:hjo00550] D AY555_06605 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AY555_06095 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AY555_06100 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AY555_06115 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AY555_06130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AY555_06090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AY555_06125 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AY555_07770 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AY555_07630 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AY555_06120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AY555_06105 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AY555_04375 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AY555_06220 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AY555_05960 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AY555_06135 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AY555_08450 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AY555_08965 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:hjo00552] D AY555_07630 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:hjo00730] D AY555_04055 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D AY555_07530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D AY555_06245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AY555_06780 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AY555_09215 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D AY555_07425 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D AY555_03660 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D AY555_08185 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D AY555_00860 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AY555_09670 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:hjo00740] D AY555_03490 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AY555_08170 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AY555_08160 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AY555_08175 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AY555_08165 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D AY555_05330 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D AY555_07925 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AY555_07690 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:hjo00750] D AY555_05895 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AY555_09430 hypothetical protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D AY555_09200 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AY555_00505 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D AY555_07985 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D AY555_02295 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:hjo00760] D AY555_01430 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D AY555_01440 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D AY555_07025 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D AY555_08610 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AY555_01995 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D AY555_08560 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AY555_07030 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D AY555_08105 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D AY555_00580 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D AY555_07605 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AY555_07610 NAD(P) transhydrogenase subunit alpha part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D AY555_07615 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D AY555_10385 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:hjo00770] D AY555_05265 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AY555_05270 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AY555_08685 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D AY555_04065 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AY555_08560 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D AY555_08580 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AY555_03810 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D AY555_07990 hypothetical protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AY555_00525 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D AY555_05570 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:hjo00780] D AY555_09625 hypothetical protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D AY555_05870 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AY555_05860 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_04955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_07805 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AY555_05885 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AY555_09620 hypothetical protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D AY555_09615 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AY555_09635 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AY555_09630 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D AY555_02320 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D AY555_08690 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:hjo00785] D AY555_00785 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D AY555_08095 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_08075 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D AY555_08080 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D AY555_08085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AY555_04770 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D AY555_04775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D AY555_02520 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D AY555_02525 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D AY555_02510 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AY555_02515 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:hjo00790] D AY555_02170 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D AY555_01555 diguanylate cyclase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AY555_08830 hypothetical protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AY555_07520 hypothetical protein K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D AY555_05680 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AY555_01375 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D AY555_03490 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AY555_08170 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AY555_03980 aminobenzoate synthetase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D AY555_02215 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AY555_03410 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AY555_02210 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AY555_02205 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AY555_05045 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:hjo00670] D AY555_05680 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AY555_05425 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AY555_08150 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AY555_06720 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AY555_03780 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AY555_03165 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AY555_02510 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AY555_01165 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AY555_05685 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AY555_05070 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AY555_01170 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AY555_07445 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:hjo00860] D AY555_09285 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AY555_08940 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_07035 glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_06840 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D AY555_08125 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AY555_02540 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D AY555_03830 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D AY555_06960 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D AY555_03840 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D AY555_03835 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AY555_01080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AY555_00365 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AY555_01690 cobalamin biosynthesis protein CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D AY555_01695 cobalt chelatase K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D AY555_03530 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AY555_03450 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hjo00130] D AY555_05290 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AY555_02415 hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D AY555_07690 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AY555_06805 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D AY555_03430 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D AY555_04410 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D AY555_05085 ubiquinone biosynthesis protein UbiB K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:hjo00900] D AY555_06780 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AY555_07780 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D AY555_08345 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D AY555_00270 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D AY555_06830 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D AY555_01810 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_07690 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AY555_06785 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AY555_09735 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AY555_07770 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:hjo00906] D AY555_08495 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:hjo00907] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_07145 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D AY555_09300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:hjo00523] D AY555_10360 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AY555_02550 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:hjo01053] D AY555_10640 hypothetical protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] D AY555_10630 hypothetical protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase C 01055 Biosynthesis of vancomycin group antibiotics D AY555_02550 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D AY555_06915 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:hjo00332] D AY555_01985 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AY555_01990 proA; gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:hjo00261] D AY555_06810 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AY555_00795 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_02080 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AY555_08800 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AY555_03085 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:hjo00521] D AY555_09940 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D AY555_00680 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AY555_07410 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AY555_10360 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AY555_02550 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D AY555_09940 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:hjo00525] D AY555_10360 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AY555_02550 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:hjo00401] D AY555_05305 cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D AY555_08895 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AY555_08915 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D AY555_05855 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AY555_05860 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_04955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_05885 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D AY555_05865 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:hjo00999] D AY555_04165 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AY555_03815 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:hjo00362] D AY555_07145 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AY555_06240 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D AY555_07140 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D AY555_03545 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:hjo00627] D AY555_07690 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation D AY555_10585 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D AY555_10585 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D AY555_07145 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation D AY555_04425 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:hjo03020] D AY555_01000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AY555_00995 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AY555_00845 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AY555_08825 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:hjo03010] D AY555_02665 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AY555_07750 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AY555_00935 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AY555_09755 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AY555_00880 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AY555_05850 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AY555_00985 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AY555_00895 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AY555_07285 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AY555_00970 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AY555_00850 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AY555_00990 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AY555_00855 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AY555_00900 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AY555_04025 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AY555_01645 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AY555_00920 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AY555_05845 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AY555_00945 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AY555_04430 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AY555_07845 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AY555_01015 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AY555_00950 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AY555_00965 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AY555_00960 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AY555_00905 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AY555_00890 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AY555_01005 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AY555_05840 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AY555_01010 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AY555_01020 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AY555_07280 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AY555_00915 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AY555_00870 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AY555_00930 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AY555_00840 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AY555_00885 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AY555_01660 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AY555_02385 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AY555_01970 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AY555_00940 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AY555_00955 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AY555_00910 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AY555_04895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D AY555_01975 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AY555_01705 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AY555_00925 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AY555_00875 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AY555_07390 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AY555_09170 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AY555_05215 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AY555_03860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_04675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_01215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_06870 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_04690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_01200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_03875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_06885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_03880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_04695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_06890 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_00010 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_01195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:hjo00970] D AY555_05440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_01205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_02645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_03870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_04685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_06880 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_02955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_04565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_07910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_02175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_05555 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AY555_08355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AY555_06350 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AY555_06355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AY555_08360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AY555_06270 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AY555_00280 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AY555_07110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AY555_08135 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AY555_01045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AY555_02165 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AY555_03310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AY555_07380 tRNA-His K14226 tRNA-His; tRNA His D AY555_03865 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_04680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_00025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_01210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_06875 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_03075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_00780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_05075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_04285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_08055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_05970 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AY555_08570 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AY555_01255 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_06030 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_03885 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_04700 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_06660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AY555_08640 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_07900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_09745 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_09740 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_01965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_02155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_08435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_09075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_06590 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AY555_01060 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AY555_03400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AY555_01035 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AY555_01050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AY555_09920 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_06985 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_08780 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_09915 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_08940 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_07035 glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_09115 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AY555_09110 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AY555_09120 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AY555_04275 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AY555_06750 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AY555_09725 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AY555_09720 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AY555_05125 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AY555_08615 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AY555_08980 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AY555_00715 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D AY555_08465 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AY555_03165 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AY555_08380 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AY555_03640 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AY555_05335 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AY555_05545 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D AY555_08520 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AY555_07720 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AY555_06835 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AY555_02390 phenylalanine--tRNA ligase subunit beta K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AY555_02395 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AY555_06185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AY555_03120 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:hjo03060] D AY555_00865 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AY555_01030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AY555_08875 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AY555_02195 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AY555_08335 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AY555_05205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AY555_04935 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AY555_03720 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AY555_01640 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AY555_02250 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D AY555_03600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AY555_08630 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D AY555_08625 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D AY555_08620 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AY555_07995 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AY555_05340 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:hjo04122] D AY555_06245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AY555_01095 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AY555_06235 tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AY555_04085 adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D AY555_09220 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:hjo03018] D AY555_03475 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AY555_06230 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AY555_08860 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AY555_04030 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AY555_07945 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AY555_09160 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AY555_02430 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AY555_03845 transcription termination factor Rho K03628 rho; transcription termination factor Rho D AY555_08680 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D AY555_04355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AY555_05525 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AY555_08305 RNA chaperone Hfq K03666 hfq; host factor-I protein D AY555_06695 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AY555_05420 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:hjo03030] D AY555_03805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_05010 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_07745 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AY555_02255 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AY555_03630 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AY555_05715 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AY555_04395 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AY555_05835 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AY555_01270 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AY555_02865 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D AY555_08590 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AY555_01800 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AY555_00235 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AY555_02475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AY555_06050 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:hjo03410] D AY555_03090 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AY555_02445 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AY555_04415 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AY555_08670 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AY555_08840 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AY555_00255 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AY555_08505 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AY555_02475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AY555_09465 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AY555_06050 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:hjo03420] D AY555_08650 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AY555_08595 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AY555_10595 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AY555_01560 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AY555_01160 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AY555_02475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AY555_06050 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:hjo03430] D AY555_04220 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AY555_05365 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AY555_01160 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AY555_05100 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AY555_06790 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AY555_09465 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AY555_08590 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AY555_07745 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AY555_04395 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AY555_02255 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AY555_03630 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AY555_03805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_05010 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_05715 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AY555_06050 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:hjo03440] D AY555_09465 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AY555_08590 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AY555_04390 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D AY555_08010 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D AY555_02265 recombination protein RecR K06187 recR; recombination protein RecR D AY555_00035 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AY555_02475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AY555_07465 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AY555_07470 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AY555_07460 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AY555_08660 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AY555_07745 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AY555_04395 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AY555_02255 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AY555_03630 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AY555_03805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_05010 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_05715 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AY555_04810 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D AY555_00210 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D AY555_11185 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:hjo02010] D AY555_08975 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AY555_08970 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AY555_08635 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AY555_01510 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AY555_01525 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D AY555_01520 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D AY555_01515 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D AY555_01915 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AY555_01185 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D AY555_09250 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AY555_09255 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AY555_05825 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AY555_05820 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AY555_07365 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D AY555_11160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AY555_11155 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AY555_11150 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AY555_11145 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AY555_06680 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AY555_06675 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D AY555_06670 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D AY555_06665 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D AY555_04260 amino acid ABC transporter K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D AY555_04255 ABC transporter K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AY555_04250 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AY555_04265 amino acid transporter K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D AY555_06200 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AY555_06195 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D AY555_02340 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D AY555_02345 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D AY555_02350 ABC transporter permease K13895 yejE; microcin C transport system permease protein D AY555_02355 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AY555_04570 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D AY555_04585 hypothetical protein K09816 znuB; zinc transport system permease protein D AY555_04580 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AY555_11000 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D AY555_10995 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D AY555_07725 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D AY555_07730 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AY555_03280 heme transporter HemC K02195 ccmC; heme exporter protein C D AY555_04315 heme transporter K02194 ccmB; heme exporter protein B D AY555_04310 hypothetical protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AY555_00490 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D AY555_03525 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AY555_03050 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AY555_02460 hypothetical protein K09811 ftsX; cell division transport system permease protein D AY555_02455 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AY555_01815 ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AY555_04295 hypothetical protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AY555_04290 ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AY555_10355 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) [PATH:hjo02060] D AY555_03035 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D AY555_03030 serine kinase K02784 ptsH; phosphocarrier protein HPr D AY555_03025 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D AY555_06820 peptidase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AY555_03040 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:hjo03070] D AY555_08370 hypothetical protein K12340 tolC; outer membrane protein D AY555_02195 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AY555_01030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AY555_08875 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AY555_00865 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AY555_08335 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AY555_05205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AY555_04935 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AY555_03600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AY555_03720 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AY555_01640 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AY555_08630 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D AY555_08625 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D AY555_08620 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AY555_10460 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] B B 09132 Signal transduction C 02020 Two-component system [PATH:hjo02020] D AY555_04235 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AY555_11135 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AY555_11160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AY555_01485 ATPase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AY555_01490 two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AY555_01740 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_03510 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_00225 hypothetical protein K02406 fliC; flagellin D AY555_04995 hypothetical protein K02406 fliC; flagellin D AY555_08030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AY555_09360 hypothetical protein K02556 motA; chemotaxis protein MotA D AY555_08250 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AY555_00365 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AY555_04440 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AY555_04630 hypothetical protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AY555_04635 two-component system response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D AY555_04205 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D AY555_07740 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D AY555_11260 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D AY555_11255 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_07265 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_08285 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D AY555_08290 AAA family ATPase K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_03045 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AY555_09585 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AY555_09640 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_09710 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_04365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05295 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05300 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05550 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_06295 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_07230 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AY555_09600 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AY555_00735 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_00120 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_09595 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_09590 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AY555_08545 hypothetical protein K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D AY555_09175 two-component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK D AY555_00040 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D AY555_09605 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT D AY555_09425 two-component system response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA D AY555_11045 hypothetical protein K13816 rpfF; DSF synthase D AY555_10590 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D AY555_01345 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AY555_01335 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AY555_01340 cytochrome B K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit D AY555_07840 cytochrome C K08738 CYC; cytochrome c D AY555_06980 hypothetical protein K08738 CYC; cytochrome c D AY555_05220 cytochrome oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AY555_05225 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AY555_05230 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D AY555_05235 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AY555_08370 hypothetical protein K12340 tolC; outer membrane protein D AY555_03590 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D AY555_11250 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:hjo04148] D AY555_11285 arginase K01476 rocF; arginase [EC:3.5.3.1] D AY555_07290 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AY555_07345 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AY555_01345 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:hjo02024] D AY555_08305 RNA chaperone Hfq K03666 hfq; host factor-I protein D AY555_08895 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AY555_08915 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AY555_07020 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AY555_11045 hypothetical protein K13816 rpfF; DSF synthase D AY555_03945 hypothetical protein K20276 bapA; large repetitive protein D AY555_04305 hypothetical protein K20276 bapA; large repetitive protein D AY555_09030 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_07150 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_04575 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AY555_03490 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D AY555_08160 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AY555_05910 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AY555_05205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AY555_02195 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AY555_01030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AY555_08875 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AY555_00865 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AY555_08335 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AY555_04935 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AY555_03600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AY555_03720 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AY555_01640 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:hjo02030] D AY555_09640 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_09710 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_04365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05295 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05300 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05550 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_06295 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_09600 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AY555_07230 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AY555_00735 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_00120 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_09595 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_00115 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AY555_00375 hypothetical protein K03414 cheZ; chemotaxis protein CheZ D AY555_09590 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AY555_09585 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AY555_09345 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AY555_00135 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AY555_09355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_02360 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_08030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AY555_09360 hypothetical protein K02556 motA; chemotaxis protein MotA D AY555_08250 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AY555_00105 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08025 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_07395 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08245 hypothetical protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:hjo02040] D AY555_00060 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D AY555_09340 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AY555_09345 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AY555_09350 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AY555_09420 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AY555_09415 hypothetical protein K02413 fliJ; flagellar protein FliJ D AY555_09325 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AY555_08190 hypothetical protein K02415 fliL; flagellar protein FliL D AY555_00140 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D AY555_00135 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AY555_09355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_02360 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_00085 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D AY555_00090 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AY555_00055 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AY555_00050 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AY555_09370 flhA; EscV/YscV/HrcV family type III secretion system export apparatus protein K02400 flhA; flagellar biosynthesis protein FlhA D AY555_00155 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D AY555_00070 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AY555_00065 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AY555_07885 hypothetical protein K02388 flgC; flagellar basal-body rod protein FlgC D AY555_09330 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AY555_09210 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AY555_09335 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AY555_00145 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AY555_00150 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AY555_00160 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D AY555_00180 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D AY555_00185 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D AY555_00195 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D AY555_00200 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D AY555_00225 hypothetical protein K02406 fliC; flagellin D AY555_04995 hypothetical protein K02406 fliC; flagellin D AY555_08030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AY555_09360 hypothetical protein K02556 motA; chemotaxis protein MotA D AY555_08250 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AY555_00105 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08025 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_07395 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08245 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_01265 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D AY555_03045 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D AY555_08860 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:hjo04980] D AY555_03530 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AY555_07350 protein kinase K07588 MMAA; GTPase [EC:3.6.5.-] D AY555_07355 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_07360 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D AY555_01165 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:hjo01501] D AY555_04605 MFS transporter permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AY555_08530 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AY555_06915 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D AY555_07830 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AY555_08370 hypothetical protein K12340 tolC; outer membrane protein D AY555_04375 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AY555_06220 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AY555_05960 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AY555_06135 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:hjo01502] D AY555_04205 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D AY555_06090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AY555_05830 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AY555_06125 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AY555_06120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AY555_06105 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hjo01503] D AY555_11080 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AY555_05065 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AY555_05990 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AY555_06225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AY555_01740 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_03510 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_07830 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AY555_08370 hypothetical protein K12340 tolC; outer membrane protein D AY555_07810 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:hjo01000] C 01001 Protein kinases [BR:hjo01001] D AY555_10460 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D AY555_09850 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AY555_04235 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AY555_01485 ATPase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AY555_04630 hypothetical protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AY555_00425 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D AY555_08285 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D AY555_10415 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AY555_09600 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AY555_00040 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:hjo01009] D AY555_02980 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AY555_01415 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AY555_05925 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:hjo01002] D AY555_05340 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] D AY555_06300 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AY555_01865 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D AY555_05805 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AY555_03910 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AY555_06995 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AY555_09680 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_10915 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_10935 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_02575 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_02580 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_02630 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AY555_09080 chaperone protein HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D AY555_09785 hypothetical protein K07052 K07052; CAAX protease family protein D AY555_09025 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D AY555_11080 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AY555_05065 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AY555_05990 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D AY555_04205 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D AY555_05355 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-] D AY555_05350 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-] D AY555_00470 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AY555_02370 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AY555_00285 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AY555_05175 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AY555_00635 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AY555_01140 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AY555_05375 peptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D AY555_07515 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AY555_03770 heat-shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D AY555_07785 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D AY555_01740 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_03510 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_08450 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AY555_08965 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AY555_08065 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AY555_08850 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AY555_08930 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AY555_07995 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AY555_02180 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AY555_09165 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AY555_06065 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AY555_03465 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AY555_06765 hypothetical protein K04773 sppA; protease IV [EC:3.4.21.-] D AY555_02810 hypothetical protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease D AY555_03795 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D AY555_06175 hypothetical protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AY555_02500 modulator protein K03592 pmbA; PmbA protein D AY555_00355 tldD; metalloprotease TldD K03568 tldD; TldD protein D AY555_01745 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D AY555_01750 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:hjo01003] D AY555_00210 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D AY555_11185 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D AY555_04375 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AY555_06220 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:hjo01005] D AY555_07810 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AY555_07820 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AY555_06070 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AY555_07800 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AY555_03515 hypothetical protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D AY555_07815 UDP-2,3-diacylglucosamine pyrophosphatase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AY555_01830 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AY555_01835 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AY555_01825 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AY555_08865 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AY555_01365 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AY555_03065 D-arabinose 5-phosphate K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AY555_09695 glycosyl transferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D AY555_03395 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AY555_03285 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AY555_04860 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D AY555_09900 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hjo01011] D AY555_06605 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AY555_06095 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AY555_06100 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AY555_06115 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AY555_06130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AY555_06090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AY555_05830 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AY555_01530 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3] D AY555_06120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AY555_06105 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AY555_07630 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AY555_03125 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AY555_04375 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AY555_06220 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AY555_05960 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AY555_06135 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AY555_08450 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AY555_08965 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AY555_04205 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D AY555_00250 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AY555_08805 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AY555_03705 hypothetical protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D AY555_08440 hypothetical protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D AY555_05875 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D AY555_08445 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AY555_06225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:hjo01004] D AY555_05855 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AY555_08220 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AY555_05870 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AY555_05860 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_04955 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AY555_07805 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AY555_05885 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AY555_06815 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D AY555_03145 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AY555_06975 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D AY555_10630 hypothetical protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D AY555_03205 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AY555_02985 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D AY555_09030 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_07150 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_08215 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AY555_09140 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 01008 Polyketide biosynthesis proteins [BR:hjo01008] D AY555_10630 hypothetical protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D AY555_10640 hypothetical protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] C 01006 Prenyltransferases [BR:hjo01006] D AY555_06785 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AY555_09735 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AY555_07770 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AY555_08495 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AY555_05290 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AY555_01080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:hjo01007] D AY555_05545 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D AY555_08940 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_07035 glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_01570 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AY555_06185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AY555_03120 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AY555_08980 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AY555_08520 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AY555_08465 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AY555_05335 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AY555_08380 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AY555_03640 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AY555_06750 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AY555_06835 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AY555_09725 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AY555_09720 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AY555_08615 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AY555_07720 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AY555_05125 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AY555_04275 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AY555_02390 phenylalanine--tRNA ligase subunit beta K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AY555_02395 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AY555_00715 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D AY555_05730 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AY555_09480 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D AY555_09285 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D AY555_09615 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AY555_01950 hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AY555_09635 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AY555_05570 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AY555_09200 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:hjo00194] D AY555_04835 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AY555_04830 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AY555_04825 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AY555_04820 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AY555_04815 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AY555_04665 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AY555_04670 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AY555_04660 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AY555_04655 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:hjo03000] D AY555_04490 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AY555_07870 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AY555_04320 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D AY555_05485 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D AY555_07250 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D AY555_01110 hypothetical protein K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D AY555_03960 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AY555_04575 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AY555_04045 Fur family transcriptional regulator K09826 irr; Fur family transcriptional regulator, iron response regulator D AY555_05260 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D AY555_06250 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D AY555_08690 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AY555_08280 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AY555_10150 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D AY555_01230 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AY555_01680 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D AY555_11265 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AY555_03615 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D AY555_02560 transcriptional regulator K05785 rfaH; transcriptional antiterminator RfaH D AY555_09815 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D AY555_03675 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D AY555_09670 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D AY555_02960 hypothetical protein K07735 algH; putative transcriptional regulator D AY555_00170 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AY555_08155 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D AY555_06150 mraZ family protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:hjo03021] D AY555_00845 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AY555_01000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AY555_00995 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AY555_08825 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AY555_01265 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D AY555_01480 RNA polymerase subunit sigma-70 K03089 rpoH; RNA polymerase sigma-32 factor D AY555_03045 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D AY555_04000 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AY555_08180 hypothetical protein K03625 nusB; transcription antitermination protein NusB D AY555_01025 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AY555_00170 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AY555_01295 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D AY555_09650 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D AY555_03845 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:hjo03019] D AY555_06230 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AY555_06650 hypothetical protein K08301 rng; ribonuclease G [EC:3.1.26.-] D AY555_08000 ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] D AY555_08680 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D AY555_09160 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AY555_07945 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AY555_02430 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AY555_08860 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AY555_04030 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AY555_03845 transcription termination factor Rho K03628 rho; transcription termination factor Rho D AY555_04355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AY555_05525 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AY555_08305 RNA chaperone Hfq K03666 hfq; host factor-I protein D AY555_06695 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AY555_05420 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D AY555_03475 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AY555_03020 hypothetical protein K06958 rapZ; RNase adapter protein RapZ D AY555_09610 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:hjo03011] D AY555_02665 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AY555_07750 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AY555_00935 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AY555_09755 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AY555_00880 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AY555_05850 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AY555_00985 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AY555_00895 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AY555_07285 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AY555_00970 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AY555_00850 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AY555_00990 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AY555_00855 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AY555_00900 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AY555_04025 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AY555_01645 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AY555_00920 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AY555_05845 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AY555_00945 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AY555_04430 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AY555_07845 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D AY555_01015 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AY555_00950 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AY555_00965 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AY555_00960 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AY555_00905 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AY555_00890 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AY555_05840 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AY555_01010 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AY555_01020 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AY555_01005 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AY555_07280 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AY555_00915 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AY555_00870 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AY555_00930 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AY555_00840 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AY555_00885 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AY555_01660 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AY555_02385 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AY555_01970 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AY555_00940 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AY555_00955 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AY555_00910 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AY555_01975 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AY555_01705 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AY555_00925 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AY555_00875 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AY555_07390 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AY555_09170 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AY555_05215 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AY555_04895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D AY555_03880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_04695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_06890 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_00010 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_01195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_03860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_04675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_01215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_06870 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_04690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_01200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_03875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_06885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:hjo03009] D AY555_08000 ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] D AY555_08005 GTPase Era K03595 era; GTPase D AY555_01980 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D AY555_00170 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AY555_04000 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AY555_08180 hypothetical protein K03625 nusB; transcription antitermination protein NusB D AY555_01025 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AY555_00510 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AY555_11165 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AY555_06290 rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AY555_01875 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AY555_05285 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AY555_03755 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AY555_06145 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AY555_04095 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AY555_06770 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D AY555_01055 pseudouridine synthase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AY555_06280 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D AY555_02005 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D AY555_07335 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D AY555_04915 23S rRNA (adenine(2503)-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AY555_08550 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D AY555_07115 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AY555_01870 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AY555_00820 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D AY555_07935 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AY555_09880 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D AY555_01650 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D AY555_09910 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D AY555_01150 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D AY555_08260 ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D AY555_06230 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AY555_06650 hypothetical protein K08301 rng; ribonuclease G [EC:3.1.26.-] D AY555_09125 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AY555_00565 ribosome biogenesis GTPase Der K03977 engA; GTPase D AY555_08310 GTPase HflX K03665 hflX; GTPase D AY555_00450 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AY555_08820 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AY555_04015 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D AY555_03995 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D AY555_02000 hypothetical protein K09710 ybeB; ribosome-associated protein D AY555_04185 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor D AY555_04905 GTP-binding protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:hjo03016] D AY555_08940 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_07035 glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_07720 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AY555_05335 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AY555_03640 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AY555_08465 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AY555_08520 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AY555_06750 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AY555_04275 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AY555_05125 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AY555_08615 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AY555_08980 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AY555_08380 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AY555_06835 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AY555_02390 phenylalanine--tRNA ligase subunit beta K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AY555_02395 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AY555_06185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AY555_03120 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AY555_03500 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AY555_04160 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D AY555_03170 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D AY555_04020 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D AY555_06245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AY555_00450 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AY555_03745 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D AY555_03750 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AY555_00455 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D AY555_05210 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D AY555_06155 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D AY555_03700 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D AY555_03070 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D AY555_06685 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D AY555_01240 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D AY555_05545 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D AY555_09725 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AY555_09720 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AY555_00715 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D AY555_01570 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AY555_05040 DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D AY555_01860 CMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D AY555_07875 tRNA dihydrouridine synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D AY555_08275 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D AY555_05670 tRNA dihydrouridine synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D AY555_04195 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D AY555_03605 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D AY555_09775 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D AY555_08320 tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D AY555_01655 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D AY555_01350 tRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D AY555_07115 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AY555_06235 tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AY555_01095 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AY555_07595 Fe-S cluster assembly scaffold SufA K13628 iscA; iron-sulfur cluster assembly protein D AY555_09705 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D AY555_07320 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D AY555_05055 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D AY555_02205 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AY555_02215 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AY555_02210 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AY555_05045 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AY555_01880 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D AY555_05050 tRNA-guanine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D AY555_07510 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D AY555_04210 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D AY555_02545 tRNA threonylcarbamoyl adenosine modification protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AY555_04155 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D AY555_09160 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AY555_04030 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:hjo03012] D AY555_04010 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AY555_05130 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AY555_05720 glycosyl transferase family 1 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D AY555_07755 elongation factor Ts K02357 tsf; elongation factor Ts D AY555_00975 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AY555_01040 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AY555_00980 fusA; elongation factor G K02355 fusA; elongation factor G D AY555_06845 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D AY555_07765 ribosome recycling factor K02838 frr; ribosome recycling factor D AY555_06850 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D AY555_06640 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D AY555_07415 elongation factor P K02356 efp; elongation factor P D AY555_07420 elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D AY555_06215 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D AY555_08955 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D AY555_11220 peptide chain release factor I K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:hjo03110] D AY555_00650 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D AY555_06920 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D AY555_08070 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D AY555_03800 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D AY555_01415 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AY555_04355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AY555_05525 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AY555_04360 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AY555_05035 hypothetical protein K05801 djlA; DnaJ like chaperone protein D AY555_02110 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D AY555_03670 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AY555_01475 heat-shock protein K04080 ibpA; molecular chaperone IbpA D AY555_05530 co-chaperone GroES K04078 groES; chaperonin GroES D AY555_01740 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_03510 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D AY555_07515 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AY555_04655 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AY555_03720 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AY555_04640 hypothetical protein K09796 pccA; periplasmic copper chaperone A D AY555_08890 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D AY555_04930 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D AY555_00500 hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D AY555_03920 thioredoxin K03671 TXN; thioredoxin D AY555_03305 hypothetical protein K05838 ybbN; putative thioredoxin D AY555_00610 glutaredoxin K03676 grxC; glutaredoxin 3 D AY555_03260 thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:hjo04131] D AY555_05725 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AY555_02065 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AY555_09050 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AY555_01415 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:hjo04121] C 03051 Proteasome [BR:hjo03051] D AY555_01415 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:hjo03032] D AY555_01800 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AY555_04490 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AY555_09320 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AY555_08845 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AY555_08225 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AY555_02670 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AY555_04440 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AY555_05835 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AY555_01270 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AY555_02865 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D AY555_10495 hypothetical protein K18996 repC; replication initiation protein RepC D AY555_08590 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AY555_07745 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AY555_04395 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AY555_05715 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AY555_03630 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AY555_03805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_05010 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_02255 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AY555_00235 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AY555_02475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AY555_06050 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AY555_08585 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AY555_04385 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AY555_08015 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AY555_06970 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AY555_09155 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:hjo03036] D AY555_00210 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D AY555_11185 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D AY555_04490 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AY555_08000 ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] D AY555_09320 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AY555_08845 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AY555_08225 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AY555_02670 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AY555_04440 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AY555_06160 DNA-binding protein K11940 hspQ; heat shock protein HspQ D AY555_04790 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D AY555_08280 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AY555_08305 RNA chaperone Hfq K03666 hfq; host factor-I protein D AY555_05485 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D AY555_06080 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AY555_02455 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AY555_06135 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AY555_07170 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AY555_03425 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AY555_06140 hypothetical protein K03586 ftsL; cell division protein FtsL D AY555_06085 hypothetical protein K03589 ftsQ; cell division protein FtsQ D AY555_06110 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AY555_02460 hypothetical protein K09811 ftsX; cell division transport system permease protein D AY555_06075 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AY555_07440 hypothetical protein K09888 zapA; cell division protein ZapA D AY555_04745 ATPase K06916 zapE; cell division protein ZapE D AY555_06225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AY555_07830 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AY555_05945 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AY555_05950 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D AY555_05955 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D AY555_05965 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D AY555_00700 ATPase K03496 parA; chromosome partitioning protein D AY555_11270 hypothetical protein K03496 parA; chromosome partitioning protein D AY555_11355 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_07930 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D AY555_10240 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_10815 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_10075 hypothetical protein K03496 parA; chromosome partitioning protein D AY555_03760 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_11265 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AY555_08015 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AY555_06970 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AY555_03750 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AY555_03755 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AY555_08320 tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D AY555_04795 recombinase XerC K03733 xerC; integrase/recombinase XerC D AY555_01605 recombinase XerD K04763 xerD; integrase/recombinase XerD D AY555_05200 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:hjo03400] D AY555_03730 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AY555_07055 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AY555_02445 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AY555_03090 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AY555_04925 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AY555_02405 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AY555_04070 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AY555_08840 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AY555_00255 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D AY555_08670 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AY555_04415 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AY555_08505 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AY555_09465 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AY555_06050 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AY555_02475 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AY555_08595 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AY555_10595 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AY555_01560 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AY555_01160 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AY555_01000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AY555_00995 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AY555_00845 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AY555_08825 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AY555_08650 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AY555_04220 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AY555_05365 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AY555_05100 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AY555_06790 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AY555_07745 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AY555_04395 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AY555_05715 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AY555_03630 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AY555_03805 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_05010 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AY555_02255 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AY555_08590 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AY555_04495 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D AY555_00035 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AY555_07465 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AY555_07470 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AY555_07460 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AY555_04810 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AY555_05815 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D AY555_04390 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D AY555_08660 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AY555_08010 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D AY555_02265 recombination protein RecR K06187 recR; recombination protein RecR D AY555_06055 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D AY555_04135 DNA helicase UvrD K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D AY555_04140 double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D AY555_10780 type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D AY555_08585 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AY555_04385 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AY555_09155 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AY555_09320 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AY555_08845 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AY555_08280 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AY555_08225 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AY555_02670 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AY555_02430 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AY555_08930 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D AY555_04555 hypothetical protein K14623 dinD; DNA-damage-inducible protein D D AY555_02100 hypothetical protein K03565 recX; regulatory protein D AY555_05565 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D AY555_09265 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AY555_01120 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AY555_01125 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:hjo03029] D AY555_04010 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AY555_05130 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AY555_07755 elongation factor Ts K02357 tsf; elongation factor Ts D AY555_00975 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AY555_01040 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AY555_00980 fusA; elongation factor G K02355 fusA; elongation factor G D AY555_08205 hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D AY555_08005 GTPase Era K03595 era; GTPase D AY555_06185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AY555_03640 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AY555_06750 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AY555_08520 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AY555_09115 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AY555_09110 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AY555_09120 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AY555_08590 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AY555_07790 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AY555_04355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AY555_03670 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AY555_05525 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AY555_05530 co-chaperone GroES K04078 groES; chaperonin GroES D AY555_04360 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AY555_06245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AY555_00625 SAM-dependent methyltransferase K18162 NDUFAF5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-] D AY555_04870 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D AY555_01080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AY555_07310 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D AY555_00365 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9] D AY555_05205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AY555_03380 electron transporter SenC K07152 SCO1; protein SCO1 D AY555_01415 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:hjo02000] D AY555_01815 ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AY555_10645 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AY555_10650 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AY555_04295 hypothetical protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AY555_04290 ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AY555_10355 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AY555_07635 elongation factor 3 K15738 uup; ABC transport system ATP-binding/permease protein D AY555_08975 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AY555_08970 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AY555_08635 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AY555_01510 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D AY555_01525 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D AY555_01520 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D AY555_01515 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D AY555_01915 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D AY555_07365 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D AY555_09250 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AY555_09255 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AY555_05825 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AY555_05820 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AY555_01185 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D AY555_11160 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AY555_11155 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AY555_11150 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AY555_11145 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AY555_06680 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D AY555_06675 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D AY555_06670 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D AY555_06665 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D AY555_06200 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D AY555_06195 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D AY555_07650 ABC transporter permease K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D AY555_07645 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D AY555_07640 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D AY555_04260 amino acid ABC transporter K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D AY555_04255 ABC transporter K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AY555_04250 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D AY555_04265 amino acid transporter K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D AY555_01330 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_01400 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_05760 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_05765 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_05770 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_05775 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_05780 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_05785 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_05790 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_04370 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_09810 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_09930 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_02970 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_02975 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_01920 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_08950 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_02685 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AY555_09805 glutamine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D AY555_01930 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein D AY555_05910 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AY555_02340 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D AY555_02345 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D AY555_02350 ABC transporter permease K13895 yejE; microcin C transport system permease protein D AY555_02355 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D AY555_04715 hypothetical protein K25132 hmuT; heme transport system substrate-binding protein D AY555_04710 hypothetical protein K25133 hmuU; heme transport system permease protein D AY555_10570 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AY555_10575 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AY555_10580 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AY555_04570 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D AY555_04585 hypothetical protein K09816 znuB; zinc transport system permease protein D AY555_04580 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AY555_11000 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D AY555_10995 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D AY555_00490 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D AY555_03525 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AY555_03050 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AY555_07725 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D AY555_07730 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AY555_03280 heme transporter HemC K02195 ccmC; heme exporter protein C D AY555_04315 heme transporter K02194 ccmB; heme exporter protein B D AY555_04310 hypothetical protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D AY555_02460 hypothetical protein K09811 ftsX; cell division transport system permease protein D AY555_02455 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AY555_09665 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D AY555_03230 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D AY555_02105 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D AY555_09660 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AY555_03235 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AY555_02485 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AY555_11180 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AY555_10450 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AY555_03135 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AY555_10455 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AY555_11170 phosphonate ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AY555_03140 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AY555_07575 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D AY555_04050 hypothetical protein K26939 norM; MATE family, multidrug efflux pump D AY555_09105 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D AY555_07715 hypothetical protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D AY555_04605 MFS transporter permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D AY555_11085 hypothetical protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AY555_03035 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D AY555_06820 peptidase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D AY555_03030 serine kinase K02784 ptsH; phosphocarrier protein HPr D AY555_03025 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D AY555_03040 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D AY555_03180 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AY555_09760 formate transporter FocA K06212 focA; formate transporter D AY555_03210 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel D AY555_08030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AY555_09360 hypothetical protein K02556 motA; chemotaxis protein MotA D AY555_08250 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AY555_00105 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08025 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_07395 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08245 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_09395 hypothetical protein K03561 exbB; biopolymer transport protein ExbB D AY555_09400 biopolymer transporter K03559 exbD; biopolymer transport protein ExbD D AY555_07480 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D AY555_07485 protein TolR K03560 tolR; biopolymer transport protein TolR D AY555_00575 magnesium transporter K03284 corA; magnesium transporter D AY555_00825 camphor resistance protein CrcB K06199 crcB; fluoride exporter D AY555_01630 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AY555_07980 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D AY555_07155 hypothetical protein K06076 fadL; long-chain fatty acid transport protein D AY555_10565 hypothetical protein K16092 btuB; vitamin B12 transporter D AY555_10610 hypothetical protein K15721 fyuA; pesticin/yersiniabactin receptor D AY555_04725 hypothetical protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D AY555_08370 hypothetical protein K12340 tolC; outer membrane protein D AY555_09860 polysaccharide biosynthesis protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D AY555_07790 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AY555_00560 pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB D AY555_06060 transporter K05807 bamD; outer membrane protein assembly factor BamD D AY555_03055 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D AY555_03060 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D AY555_00495 hypothetical protein K04744 lptD; LPS-assembly protein D AY555_03635 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D AY555_04180 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D AY555_01760 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D AY555_05890 hypothetical protein K13283 fieF; ferrous-iron efflux pump FieF D AY555_05000 molecular chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE D AY555_05030 multidrug DMT transporter permease K15268 eamA; O-acetylserine/cysteine efflux transporter D AY555_07740 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D AY555_10365 beta-aspartyl-peptidase K02168 betT; choline/glycine/proline betaine transport protein D AY555_09875 sodium:proline symporter K11928 putP; sodium/proline symporter D AY555_05020 actP; cation acetate symporter K14393 actP; cation/acetate symporter D AY555_09085 hypothetical protein K03313 nhaA; Na+:H+ antiporter, NhaA family D AY555_07275 sodium:proton antiporter K11105 cvrA; potassium/hydrogen antiporter D AY555_02680 hypothetical protein K03455 KEA1_2_3; K+:H+ antiporter D AY555_00240 ferrous iron transporter K26735 KEA4_5_6; K+:H+ antiporter D AY555_06800 potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein D AY555_08295 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D AY555_00350 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D AY555_03175 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D AY555_03125 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AY555_00460 hypothetical protein K13936 mdcF; malonate transporter and related proteins D AY555_01300 trkD; potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D AY555_05490 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D AY555_11120 hypothetical protein K26605 azlC; branched chain amino acid efflux pump D AY555_11125 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D AY555_06775 hypothetical protein K05595 marC; multiple antibiotic resistance protein D AY555_06110 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AY555_09405 hypothetical protein K03832 tonB; periplasmic protein TonB D AY555_07500 cell envelope biogenesis protein OmpA K03640 pal; peptidoglycan-associated lipoprotein D AY555_07495 tolB; translocation protein TolB K03641 tolB; TolB protein D AY555_08195 hppA; sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D AY555_02965 hypothetical protein K08344 scsB; suppressor for copper-sensitivity B D AY555_10350 hypothetical protein K12537 hasE; membrane fusion protein, type I secretion system D AY555_04300 hypothetical protein K12542 lapC; membrane fusion protein, adhesin transport system D AY555_07830 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AY555_09850 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D AY555_00290 iron transporter FeoA K04758 feoA; ferrous iron transport protein A D AY555_00295 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D AY555_03265 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:hjo02044] D AY555_08370 hypothetical protein K12340 tolC; outer membrane protein D AY555_10355 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D AY555_10350 hypothetical protein K12537 hasE; membrane fusion protein, type I secretion system D AY555_04295 hypothetical protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AY555_04290 ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AY555_04300 hypothetical protein K12542 lapC; membrane fusion protein, adhesin transport system D AY555_05435 hypothetical protein K02221 yggT; YggT family protein D AY555_08935 hypothetical protein K02238 comEC; competence protein ComEC D AY555_09370 flhA; EscV/YscV/HrcV family type III secretion system export apparatus protein K02400 flhA; flagellar biosynthesis protein FlhA D AY555_00075 flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein D AY555_09340 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AY555_09350 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AY555_09420 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AY555_09355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_02360 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_00085 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D AY555_00090 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AY555_00055 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AY555_00050 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AY555_10460 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D AY555_04935 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AY555_03720 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AY555_02195 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D AY555_01030 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AY555_08875 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AY555_00865 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AY555_01640 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AY555_03600 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AY555_08335 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AY555_05205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AY555_08630 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D AY555_08625 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D AY555_08620 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:hjo02042] D AY555_01630 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:hjo02022] D AY555_04235 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AY555_11135 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AY555_01485 ATPase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D AY555_01490 two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D AY555_04630 hypothetical protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AY555_04635 two-component system response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D AY555_02020 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D AY555_02305 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D AY555_00425 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D AY555_00420 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator D AY555_08285 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D AY555_08290 AAA family ATPase K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D AY555_10415 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AY555_09600 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AY555_00735 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_00120 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_09595 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_09590 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AY555_08545 hypothetical protein K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D AY555_09175 two-component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK D AY555_00040 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D AY555_09425 two-component system response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA C 02035 Bacterial motility proteins [BR:hjo02035] D AY555_09600 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AY555_07230 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AY555_09585 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AY555_09590 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AY555_00735 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_00120 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_09595 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AY555_00115 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AY555_00375 hypothetical protein K03414 cheZ; chemotaxis protein CheZ D AY555_09640 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_09710 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_04365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05295 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05300 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_05550 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_06295 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AY555_09350 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AY555_09420 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AY555_09415 hypothetical protein K02413 fliJ; flagellar protein FliJ D AY555_00085 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D AY555_00090 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AY555_00055 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D AY555_00050 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AY555_09370 flhA; EscV/YscV/HrcV family type III secretion system export apparatus protein K02400 flhA; flagellar biosynthesis protein FlhA D AY555_09345 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AY555_00135 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AY555_09355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_02360 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AY555_09340 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AY555_00180 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D AY555_00155 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D AY555_00160 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D AY555_08190 hypothetical protein K02415 fliL; flagellar protein FliL D AY555_00140 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D AY555_00060 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D AY555_09325 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AY555_00070 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AY555_00065 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AY555_07885 hypothetical protein K02388 flgC; flagellar basal-body rod protein FlgC D AY555_09330 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AY555_00145 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AY555_00150 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AY555_00185 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D AY555_09210 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AY555_09335 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AY555_00195 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D AY555_00200 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D AY555_00225 hypothetical protein K02406 fliC; flagellin D AY555_04995 hypothetical protein K02406 fliC; flagellin D AY555_08030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AY555_09360 hypothetical protein K02556 motA; chemotaxis protein MotA D AY555_08250 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AY555_00105 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08025 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_07395 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_08245 hypothetical protein K02557 motB; chemotaxis protein MotB D AY555_00215 hypothetical protein K06602 flaF; flagellar biosynthesis activator protein FlaF D AY555_00220 hypothetical protein K06601 flbT; flagellar biosynthesis repressor protein FlbT D AY555_09380 cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:hjo04812] D AY555_05945 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AY555_06075 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AY555_06080 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AY555_00700 ATPase K03496 parA; chromosome partitioning protein D AY555_11270 hypothetical protein K03496 parA; chromosome partitioning protein D AY555_11355 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_07930 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D AY555_10240 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_10815 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_10075 hypothetical protein K03496 parA; chromosome partitioning protein D AY555_03760 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AY555_11265 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:hjo04147] D AY555_01415 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AY555_08860 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AY555_02065 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AY555_02070 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AY555_09050 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AY555_00285 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D AY555_01310 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D AY555_05525 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AY555_04355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AY555_05360 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AY555_06285 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AY555_00975 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AY555_01040 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AY555_03500 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AY555_03580 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D AY555_09030 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_07150 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AY555_00765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01250 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_01905 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D AY555_02980 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AY555_00860 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AY555_09580 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AY555_09790 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AY555_09795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AY555_08790 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D AY555_11255 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_07265 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AY555_08125 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AY555_03410 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AY555_07545 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AY555_03780 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AY555_08090 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_04780 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AY555_03540 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D AY555_11200 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AY555_08880 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AY555_00390 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:hjo02048] D AY555_10780 type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D AY555_10775 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D AY555_10785 type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D AY555_00230 modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72] D AY555_10280 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D AY555_11395 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D AY555_04490 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AY555_10900 type III restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D AY555_10895 DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D AY555_02850 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D AY555_10050 growth inhibitor PemK K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D AY555_10160 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D AY555_11345 damage-inducible protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D AY555_10230 damage-inducible protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D AY555_11350 antitoxin DinJ K07473 dinJ; DNA-damage-inducible protein J D AY555_10235 antitoxin DinJ K07473 dinJ; DNA-damage-inducible protein J D AY555_10150 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D AY555_06075 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AY555_05945 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AY555_08015 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AY555_06970 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AY555_08940 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_07035 glutamine--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AY555_08655 hypothetical protein K09159 cptB; antitoxin CptB D AY555_06245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:hjo01504] D AY555_07000 hypothetical protein K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81] D AY555_06915 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D AY555_04205 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D AY555_07830 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AY555_08370 hypothetical protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:hjo00536] D AY555_10755 hypothetical protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hjo00537] D AY555_00285 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:hjo03100] D AY555_05440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_01205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_02645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_03870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_04685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_06880 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AY555_02955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_04565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_07910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_02175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AY555_05555 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AY555_08355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AY555_06350 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AY555_06355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AY555_08360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AY555_06270 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AY555_00280 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AY555_07110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AY555_08135 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AY555_01045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AY555_02165 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AY555_03310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AY555_07380 tRNA-His K14226 tRNA-His; tRNA His D AY555_03865 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_04680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_00025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_01210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_06875 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AY555_03075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_00780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_05075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_04285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_08055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AY555_05970 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AY555_08570 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AY555_01255 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_06030 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_03885 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_04700 tRNA-Met K14230 tRNA-Met; tRNA Met D AY555_06660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AY555_08640 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_07900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_09745 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_09740 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AY555_01965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_02155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_08435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_09075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AY555_06590 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AY555_01060 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AY555_03400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AY555_01035 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AY555_01050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AY555_09920 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_06985 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_08780 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_09915 tRNA-Val K14237 tRNA-Val; tRNA Val D AY555_03860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_04675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_01215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_06870 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AY555_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_04690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_01200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_03875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_06885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AY555_03880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_04695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_06890 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_00010 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_01195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AY555_02250 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D AY555_06155 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D AY555_05690 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D AY555_06950 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D AY555_10515 NAD(P)-dependent oxidoreductase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276] D AY555_07950 pyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D AY555_09035 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D AY555_00260 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D AY555_09015 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AY555_06745 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AY555_01450 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D AY555_08485 hypothetical protein K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D AY555_00340 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D AY555_03850 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AY555_00405 pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D AY555_08365 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AY555_08605 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AY555_04175 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D AY555_03950 lyso-ornithine lipid acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D AY555_06310 hypothetical protein K22885 K22885; dTDP-4-amino-4,6-dideoxyglucose formyltransferase [EC:2.3.1.-] D AY555_09240 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D AY555_08020 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D AY555_03955 hemolysin-like protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30] D AY555_04865 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D AY555_03825 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D AY555_02055 polyphosphate kinase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D AY555_06430 hypothetical protein K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7] D AY555_06740 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D AY555_07475 acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AY555_08470 LuxR family transcriptional regulator K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AY555_02755 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D AY555_07175 hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-] D AY555_09995 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D AY555_00675 hypothetical protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D AY555_11110 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AY555_07850 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AY555_03160 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AY555_09095 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D AY555_05400 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AY555_08235 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D AY555_08045 bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D AY555_09495 gamma carbonic anhydrase family protein K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-] D AY555_08490 hypothetical protein K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156] D AY555_06965 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D AY555_05250 ATPase P K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D AY555_00630 sugar fermentation stimulation protein SfsA K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D AY555_03625 4Fe-4S ferredoxin K05524 fdxA; ferredoxin D AY555_03535 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D AY555_04620 hypothetical protein K06203 cysZ; CysZ protein D AY555_03665 alanine racemase K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D AY555_02675 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D AY555_05660 hypothetical protein K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D AY555_02530 hypothetical protein K02498 hemY; HemY protein D AY555_04405 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D AY555_07855 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D AY555_08100 cyclase K18588 COQ10; coenzyme Q-binding protein COQ10 D AY555_08765 hypothetical protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D AY555_09070 phospholipase K06999 K06999; phospholipase/carboxylesterase D AY555_08350 GCN5 family acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D AY555_02270 cold-shock protein K03704 cspA; cold shock protein D AY555_09645 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D AY555_00655 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D AY555_08060 trigger factor K03545 tig; trigger factor D AY555_08795 SsrA-binding protein K03664 smpB; SsrA-binding protein D AY555_02280 AAA family ATPase K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D AY555_10200 resolvase K07450 K07450; putative resolvase D AY555_10340 resolvase K07450 K07450; putative resolvase D AY555_11315 resolvase K07450 K07450; putative resolvase D AY555_11455 resolvase K07450 K07450; putative resolvase D AY555_02625 resolvase K07450 K07450; putative resolvase D AY555_00640 hypothetical protein K03630 radC; DNA repair protein RadC D AY555_06935 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D AY555_04100 hypothetical protein K07460 yraN; putative endonuclease D AY555_09150 DNA processing protein DprA K04096 smf; DNA processing protein D AY555_00830 AAA family ATPase K07478 ycaJ; putative ATPase D AY555_02860 hypothetical protein K06919 K06919; putative DNA primase/helicase D AY555_10205 transposase K07496 K07496; putative transposase D AY555_10345 transposase K07496 K07496; putative transposase D AY555_02620 transposase K07496 K07496; putative transposase D AY555_11320 transposase K07496 K07496; putative transposase D AY555_11460 transposase K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D AY555_02260 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D AY555_02290 BCCT transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D AY555_04890 Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D AY555_07105 nucleoside transporter NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D AY555_00800 hypothetical protein K06190 ispZ; intracellular septation protein D AY555_10250 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D AY555_11365 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D AY555_10825 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D AY555_03460 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D AY555_04610 GTP-binding protein TypA K06207 typA; GTP-binding protein D AY555_04190 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AY555_02310 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AY555_05015 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D AY555_01180 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D AY555_00810 hypothetical protein K07290 yhjG; AsmA family protein D AY555_11175 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein D AY555_03270 cytochrome c biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D AY555_03250 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AY555_03255 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D AY555_06825 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D AY555_11140 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D AY555_04240 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D AY555_07705 hypothetical protein K07216 hr; hemerythrin D AY555_04720 hypothetical protein K07225 hmuS; putative hemin transport protein D AY555_06340 peptidase K07231 K07231; putative iron-regulated protein B B 09194 Poorly characterized C 99996 General function prediction only D AY555_05810 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D AY555_03095 hypothetical protein K03796 bax; Bax protein D AY555_09565 hypothetical protein K06886 glbN; hemoglobin D AY555_05195 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D AY555_08510 heme biosynthesis protein HemY K15724 erpA; iron-sulfur cluster insertion protein D AY555_07570 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D AY555_07580 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D AY555_03715 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D AY555_04345 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D AY555_11235 hypothetical protein K11740 nfrB; bacteriophage N4 adsorption protein B D AY555_02400 hypothetical protein K13255 fhuF; ferric iron reductase protein FhuF D AY555_08775 hypothetical protein K03745 slyX; SlyX protein D AY555_01540 hypothetical protein K05805 creA; CreA protein D AY555_05745 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D AY555_03390 hypothetical protein K06867 K06867; uncharacterized protein D AY555_06210 hypothetical protein K06889 K06889; uncharacterized protein D AY555_03130 hypothetical protein K06890 K06890; uncharacterized protein D AY555_10730 phage baseplate protein K06903 W; Bacteriophage baseplate protein W D AY555_09970 hypothetical protein K06903 W; Bacteriophage baseplate protein W D AY555_06510 phage baseplate protein K06903 W; Bacteriophage baseplate protein W D AY555_10660 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D AY555_10165 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D AY555_06455 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D AY555_10670 hypothetical protein K06906 gpU; phage tail protein D AY555_10170 hypothetical protein K06906 gpU; phage tail protein D AY555_06465 phage tail protein K06906 gpU; phage tail protein D AY555_10690 phage tail protein K06907 FI; Bacteriophage tail sheath protein D AY555_10190 phage tail protein K06907 FI; Bacteriophage tail sheath protein D AY555_06485 phage tail protein K06907 FI; Bacteriophage tail sheath protein D AY555_10685 phage tail protein K06908 FII; Bacteriophage tail tube protein D AY555_10185 hypothetical protein K06908 FII; Bacteriophage tail tube protein D AY555_06480 phage tail protein K06908 FII; Bacteriophage tail tube protein D AY555_07270 CoA-binding protein K06929 K06929; uncharacterized protein D AY555_00775 hypothetical protein K06996 K06996; uncharacterized protein D AY555_06265 alpha/beta hydrolase K07018 K07018; uncharacterized protein D AY555_05705 hypothetical protein K07020 K07020; uncharacterized protein D AY555_05750 hypothetical protein K07028 K07028; uncharacterized protein D AY555_02895 nucleotidyltransferase K07075 K07075; uncharacterized protein D AY555_02375 hypothetical protein K07080 K07080; uncharacterized protein D AY555_04350 hypothetical protein K07090 K07090; uncharacterized protein D AY555_03115 permease K07090 K07090; uncharacterized protein D AY555_07040 hypothetical protein K07090 K07090; uncharacterized protein D AY555_11210 hypothetical protein K07112 K07112; uncharacterized protein D AY555_11215 YeeE/YedE K07112 K07112; uncharacterized protein D AY555_06925 hypothetical protein K07140 K07140; MOSC domain-containing protein D AY555_07895 hypothetical protein K09005 K09005; uncharacterized protein D AY555_01275 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D AY555_05430 hypothetical protein K09131 K09131; uncharacterized protein D AY555_03370 hypothetical protein K09160 K09160; uncharacterized protein D AY555_01130 hypothetical protein K09768 K09768; uncharacterized protein D AY555_03220 hypothetical protein K09780 K09780; uncharacterized protein D AY555_10560 hypothetical protein K09790 K09790; uncharacterized protein D AY555_03300 hypothetical protein K09791 K09791; uncharacterized protein D AY555_03385 hypothetical protein K09792 K09792; uncharacterized protein D AY555_03470 hypothetical protein K09798 K09798; uncharacterized protein D AY555_08905 hypothetical protein K09798 K09798; uncharacterized protein D AY555_04540 hypothetical protein K09803 K09803; uncharacterized protein D AY555_02940 hypothetical protein K09803 K09803; uncharacterized protein D AY555_07180 hypothetical protein K09861 K09861; uncharacterized protein D AY555_06655 hypothetical protein K09862 K09862; uncharacterized protein D AY555_04800 hypothetical protein K09921 K09921; uncharacterized protein D AY555_07200 hypothetical protein K09930 K09930; uncharacterized protein D AY555_06325 hypothetical protein K09947 K09947; uncharacterized protein D AY555_10600 hypothetical protein K09975 K09975; uncharacterized protein D AY555_05695 hypothetical protein K09985 K09985; uncharacterized protein D AY555_05405 hypothetical protein K09986 K09986; uncharacterized protein D AY555_09020 cytoplasmic protein K09987 K09987; uncharacterized protein D AY555_08375 hypothetical protein K09991 K09991; uncharacterized protein D AY555_06945 nucleoside-diphosphate sugar epimerase K07276 K07276; uncharacterized protein D AY555_06330 hypothetical protein K07338 K07338; uncharacterized protein D AY555_04005 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024